Pregenerated sensors for ATE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030850Ensembl transcript IDs: ENSMUST00000033139.15, ENSMUST00000035458.15, ENSMUST00000094017.5, ENSMUST00000178534.8, ENSMUST00000207041.2, ENSMUST00000207141.2, ENSMUST00000216011.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTaGTGTGCCTCACGAAGTAGCTGGCTGCCTGCCTCCTTGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: IQLPEHLREASPHQV*CASRSSWLPASLTA Trigger: TGCTGTCAAGGAGGCAGGCAGCCAGCTACTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | ACCAGGTCTGATGTGCCTCACGAAGTAGCTGGCTGCCTGCCTCCTTaGCAGCAGGCATTTGGTGAACAAGCAGAAGGCCCAACAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: TRSDVPHEVAGCLPP*QQAFGEQAEGPTAQ Trigger: TTGTGCTGTTGGGCCTTCTGCTTGTTCACCAAATGCCTGCTGTCAAGGAGGCAGGCAGCCAGCTACTTCGTGAGGCACATCAGACCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | TCACGAAGTAGCTGGCTGCCTGCCTCCTTGACAGCAGGCATTTGGTaGACAAGCAGAAGGCCCAACAGCACAAGAATGAAAGTGAATGGC | + |
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Preference number: 1 (lower is better) Translates to: SRSSWLPASLTAGIW*TSRRPNSTRMKVNG Trigger: GCCATTCACTTTCATTCTTGTGCTGTTGGGCCTTCTGCTTGTTCACCAAATGCCTGCTGTCAAGGAGGCAGGCAGCCAGCTACTTCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR CCA 90 bp | GAAGGGGACACTAAGAAGGAGATGGAACACACAGACCTTCCTACCTaGAGAAGTCAGACACTGTCCCTGAAAGGCTTGCACGCATCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EGDTKKEMEHTDLPT*RSQTLSLKGLHASL Trigger: TAAAGATGCGTGCAAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCCATCTCCTTCTTAGTGTCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | GCACATTTCCTGGGATGGAATGTGCTCTTCACCTTTAAGCCCATCTaGATTTCCCAGCATAAGCTAATGTCTTGCATGGGTCTTAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AHFLGWNVLFTFKPI*ISQHKLMSCMGLSQ Trigger: CTGGCTAAGACCCATGCAAGACATTAGCTTATGCTGGGAAATTCAGATGGGCTTAAAGGTGAAGAGCACATTCCATCCCAGGAAATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR CCA 90 bp | GTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTaGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGGCTTGGAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: VIFMKRNKVTTLPSL*DRCSQQLQGQAWKH Trigger: GTGCTTCCAAGCCTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | AGTCAGACACTGTCCCTGAAAGGCTTGCACGCATCTTTATTTACATaGAAATCACTGACAGAATCAGCCGCCTCAGCGAGACTTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: SQTLSLKGLHASLFT*KSLTESAASARLYK Trigger: TTTGTAAAGTCTCGCTGAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCTTTCAGGGACAGTGTCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | AAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTaGACACCTGATGTTTGCAATGTTTACAGTTCCTGTTGTCTATTA | + |
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Preference number: 1 (lower is better) Translates to: KTTDIGRTVLDRHPK*TPDVCNVYSSCCLL Trigger: TAATAGACAACAGGAACTGTAAACATTGCAAACATCAGGTGTTCACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR TCA 90 bp | GCCTGGCTGCCCAATGCCAAGGTCATATATGTGATCCCATCCTACTaGAGAATACTGAGATTACCTATCACATCTTCTGCAATCTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: AWLPNAKVIYVIPSY*RILRLPITSSAIFN Trigger: ATTGAAGATTGCAGAAGATGTGATAGGTAATCTCAGTATTCTTCAGTAGGATGGGATCACATATATGACCTTGGCATTGGGCAGCCAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTGACTGTGGCAAGAGATaGCAGGCTGGCGCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASDCGKR*QAGAGL Trigger: CAGCCCAGCGCCAGCCTGGCATCTCTTGCCACAGTC...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCGGCTGGTCTCCATTCTaGAGTACCATGGCAGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGGWSPF*STMAAP Trigger: AGGCGCTGCCATGGTACTTCAGAATGGAGACCAGCC...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCGGCTGCCTGCCTCCTTaGCAGCAGGCATTTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGGCLPP*QQAFGE Trigger: TTCACCAAATGCCTGCTGTCAAGGAGGCAGGCAGCC...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR GCA 90 bp | TCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCTCACGAAGTACTTGGTGAATGGCTaGAGGAGCCGAGAAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SRAPEGSLSSPGLMCLTKYLVNG*RSREAG Trigger: ACCTGCTTCTCGGCTCCTGCAGCCATTCACCAAGTA...CTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTGGCTGCCTGCCTCCTTaGCAGCAGGCATTTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASGCLPP*QQAFGE Trigger: TTCACCAAATGCCTGCTGTCAAGGAGGCAGGCAGCC...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCCTACCAGGATATGCCTaGCTGCCCAATGCCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGLPGYA*LPNAKV Trigger: GACCTTGGCATTGGGCAGCCAGGCATATCCTGGTAG...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTTGGCTCGATGCCCAGTaGCTAGGCCAGTGGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLWLDAQ*LGQWPV Trigger: CACTGGCCACTGGCCTAGCCACTGGGCATCGAGCCA...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAGACATGAAGCACACCTTGCTCCAGAAGCAAGCTGCAAAGGACAAGTCCAAGCAGGTGGGACTGTaGCAAGAGATGCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGDMKHTLLQKQAAKDKSKQVGL*QEMPGW Trigger: CCAGCCTGGCATCTCTTGCCACAGTCCCACCTGCTT...GGACTTGTCCTTTGCAGCTTGCTTCTGGAGCAAGGTGTGCTTCATGTCTCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTGAGCCGAGAAGCAGGTaGGACTGTGGCAAGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLEPRSR*DCGKRC Trigger: GCATCTCTTGCCACAGTCCCACCTGCTTCTCGGCTC...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGGAGCCGAGAAGCAGGTaGGACTGTGGCAAGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVEPRSR*DCGKRC Trigger: GCATCTCTTGCCACAGTCCCACCTGCTTCTCGGCTC...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGGCAGCGCCTACTCTCTaGCCCACAACTAGAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWAAPTL*PTTRRG Trigger: TCCTCTTCTAGTTGTGGGTCAGAGAGTAGGCGCTGC...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCAGCTTCCCGAGCACCTaGGGGAAGCCTCTCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: RLARIFIYMKITDRISRLSFPST*GKPLLT Trigger: GGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGAAGCT...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR GCA 90 bp | GATAACTCTGGGGCACAAGGGAACACTAGTGACAAGGAAAACAATTATGCCAAGGACTGTGGCAAGAGATaGCAGGCTGGCGCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: DNSGAQGNTSDKENNYAKDCGKR*QAGAGL Trigger: CAGCCCAGCGCCAGCCTGGCATCTCTTGCCACAGTC...CTTGGCATAATTGTTTTCCTTGTCACTAGTGTTCCCTTGTGCCCCAGAGTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR GCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCCTACTGAATCCCCAGTaGCTGCATTTCAAACACACA | + |
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Preference number: 2 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGLLNPQ*LHFKHT Trigger: TGTGTGTTTGAAATGCAGGCACTGGGGATTCAGTAG...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTATGGGTCTTAGCCAGTaGTTCTTTCTCTACCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASMGLSQ*FFLYLP Trigger: AGGAAGGTAGAGAAAGAACCACTGGCTAAGACCCAT...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTGCACATTTCCTGGGATaGAATGTGCTCTTCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASAHFLG*NVLFTF Trigger: AAAGGTGAAGAGCACATTCCATCCCAGGAAATGTGC...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTGAAAGGCACATTTCCTaGGATGGAATGTGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASERHIS*DGMCSS Trigger: TGAAGAGCACATTCCATCCCAGGAAATGTGCCTTTC...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTCAGGGTTCTGGTTTGTaGGAAAGGCACATTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLQGSGL*ERHISW Trigger: CCAGGAAATGTGCCTTTCCCACAAACCAGAACCCTG...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | TCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCTCACGAAGCTGAGTTCCAGAGAATaGAAAGTAGGAAGCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: SRAPEGSLSSPGLMCLTKLSSRE*KVGSYF Trigger: AAAATAGCTTCCTACTTTCCATTCTCTGGAACTCAG...CTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCCCAGGTGCTTCCCATTaGAGTGATTTTTATGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGPGASH*SDFYEK Trigger: CTTTTCATAAAAATCACTCCAATGGGAAGCACCTGG...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACACAGCAGGCATTTGGTaGACAAGCAGAAGGCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDTAGIW*TSRRPN Trigger: GTTGGGCCTTCTGCTTGTTCACCAAATGCCTGCTGT...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACGAGGTACTCCTCTACTaGATCCCCAGTGCCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDEVLLY*IPSACI Trigger: AATGCAGGCACTGGGGATTCAGTAGAGGAGTACCTC...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACGTCCTAACCGAGCTGTaGTGGACACTCACTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDVLTEL*WTLTQE Trigger: CTCTTGAGTGAGTGTCCATCACAGCTCGGTTAGGAC...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGAAGCAGGTGGGACTGTaGCAAGAGATGCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GNYIARNAQFYLGWTRDLKQVGL*QEMPGW Trigger: CCAGCCTGGCATCTCTTGCCACAGTCCCACCTGCTT...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTTCCCTAAATATTCACTaGAGACATGAAGCACACCTT | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASSLNIH*RHEAHL Trigger: AAGGTGTGCTTCATGTCTCCAGTGAATATTTAGGGA...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTGCACATTTCCTGGGATaGAATGTGCTCTTCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLAHFLG*NVLFTF Trigger: AAAGGTGAAGAGCACATTCCATCCCAGGAAATGTGC...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTAAGAATGAAAGTGAATaGCTGGTCTCCATTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KQRANLCIQLPEHLREASKNESE*LVSILK Trigger: CTTCAGAATGGAGACCAGCCATTCACTTTCATTCTT...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACTCTCCTCACCAGGTCTaGTGTGCCTCACGAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: FKHTLPDPTFYMGSRELNSPHQV*CASRSS Trigger: GCTACTTCGTGAGGCACATCAGACCTGGTGAGGAGA...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR TCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGACCTTTAAGCCCATCTaGATTTCCCAGCATAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVTFKPI*ISQHKL Trigger: TAGCTTATGCTGGGAAATTCAGATGGGCTTAAAGGT...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTGGAAGCTATTTTCTTTaGATAAGCCTCAGATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLGSYFL*ISLRSS Trigger: GCTTGATCTGAGGCTTATCCAAAGAAAATAGCTTCC...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTTGGACAAGAGATTTGTaGGTTTCCATAATGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GTHRPSYLEKSDTVPERLWTRDL*VSIMLL Trigger: AAGGAGCATTATGGAAACCCACAAATCTCTTGTCCA...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACATGGGTCTTAGCCAGTaGTTCTTTCTCTACCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDMGLSQ*FFLYLP Trigger: AGGAAGGTAGAGAAAGAACCACTGGCTAAGACCCAT...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATGCCTCACGAAGTAGCTaGCTGCCTGCCTCCTTGACA | + |
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Preference number: 2 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDASRSS*LPASLT Trigger: TGTCAAGGAGGCAGGCAGCCAGCTACTTCGTGAGGC...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR-3UTR GCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACTCCTGGGATGGAATGTaGTCTTCACCTTTAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FKHTLPDPTFYMGSRELNSWDGM*SSPLSP Trigger: TGGGCTTAAAGGTGAAGAGCACATTCCATCCCAGGA...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| 3UTR CAA 90 bp | TCAACAGCATCCTCCACTGTAGAATCCATGGGCTCATCCTCACAATaGCCTTTCGAGATCTCTCCTTTAGCCAGAAATTTCAGCATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: STASSTVESMGSSSQ*PFEISPLARNFSIF Trigger: AAAAATGCTGAAATTTCTGGCTAAAGGAGAGATCTCGAAAGGCAATTGTGAGGATGAGCCCATGGATTCTACAGTGGAGGATGCTGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGGACAGACACCCAAAGTaGACACCTGATGTTTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GNYIARNAQFYLGWTRDLDRHPK*TPDVCN Trigger: ATTGCAAACATCAGGTGTTCACTTTGGGTGTCTGTC...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGGAAAGGCACATTTCCTaGGATGGAATGTGCTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GNYIARNAQFYLGWTRDLERHIS*DGMCSS Trigger: TGAAGAGCACATTCCATCCCAGGAAATGTGCCTTTC...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACCCAGGTGCTTCCCATTaGAGTGATTTTTATGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDPGASH*SDFYEK Trigger: CTTTTCATAAAAATCACTCCAATGGGAAGCACCTGG...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCTCCTTTCTCTATGCCTaGGAGGATTTCAAACGACTT | + |
|
Preference number: 2 (lower is better) Translates to: RLARIFIYMKITDRISRLSFLYA*EDFKRL Trigger: AAGTCGTTTGAAATCCTCCCAGGCATAGAGAAAGGA...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACTGGACAAGAGATTTGTaGGTTTCCATAATGCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SAASARLYKNAKLGYFLDWTRDL*VSIMLL Trigger: AAGGAGCATTATGGAAACCCACAAATCTCTTGTCCA...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCCTACCAGGATATGCCTaGCTGCCCAATGCCAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILLPGYA*LPNAKV Trigger: GACCTTGGCATTGGGCAGCCAGGCATATCCTGGTAG...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGACCTTTAAGCCCATCTaGATTTCCCAGCATAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GNYIARNAQFYLGWTRDLTFKPI*ISQHKL Trigger: TAGCTTATGCTGGGAAATTCAGATGGGCTTAAAGGT...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR TCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCACAGCAGGCATTTGGTaGACAAGCAGAAGGCCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILTAGIW*TSRRPN Trigger: GTTGGGCCTTCTGCTTGTTCACCAAATGCCTGCTGT...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR GCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCTACTTGGTGAATGGCTaGAGGAGCCGAGAAGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILYLVNG*RSREAG Trigger: ACCTGCTTCTCGGCTCCTGCAGCCATTCACCAAGTA...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCTTTTCCTCTATTCTCTaGAGGAGAAACTCAGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RLARIFIYMKITDRISRLFSSIL*RRNSEL Trigger: TAGCTCTGAGTTTCTCCTGCAGAGAATAGAGGAAAA...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCCAGTTTTATTTGGGGTaGACAAGAGATTTGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RLARIFIYMKITDRISRLQFYLG*TRDLWV Trigger: AACCCACAAATCTCTTGTCCACCCCAAATAAAACTG...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CAA 90 bp | CCTTTGAGGTCACTGAGTGTTTTGAGATCACACTTTATATCCAGCTaGTTAATTAATGCAAAGTCACCGTCAACAGCATCCTCCACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PLRSLSVLRSHFISS*LINAKSPSTASSTV Trigger: TACAGTGGAGGATGCTGTTGACGGTGACTTTGCATTAATTAACAAGCTGGATATAAAGTGTGATCTCAAAACACTCAGTGACCTCAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATGCTCCAGAAGCAAGCTaGAAAGGACAAGTCCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDAPEAS*KGQVPI Trigger: AATTGGGACTTGTCCTTTGCAGCTTGCTTCTGGAGC...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACTTTTCCTCTATTCTCTaGAGGAGAAACTCAGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: FKHTLPDPTFYMGSRELNFSSIL*RRNSEL Trigger: TAGCTCTGAGTTTCTCCTGCAGAGAATAGAGGAAAA...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACAAGAATGAAAGTGAATaGCTGGTCTCCATTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FKHTLPDPTFYMGSRELNKNESE*LVSILK Trigger: CTTCAGAATGGAGACCAGCCATTCACTTTCATTCTT...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR GCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCTCCTGGGATGGAATGTaGTCTTCACCTTTAAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILSWDGM*SSPLSP Trigger: TGGGCTTAAAGGTGAAGAGCACATTCCATCCCAGGA...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR TCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCGTGATCCCATCCTACTaGAGAATACTGAGATTACCT | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILVIPSY*RILRLP Trigger: AGGTAATCTCAGTATTCTTCAGTAGGATGGGATCAC...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCTCCTTTCTCTATGCCTaGGAGGATTTCAAACGACTT | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILSFLYA*EDFKRL Trigger: AAGTCGTTTGAAATCCTCCCAGGCATAGAGAAAGGA...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR GCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCACCTATCACATCTTCTaGAATCTTCAATCTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILTYHIF*NLQSHT Trigger: TGTGTGAGATTGAAGATTGCAGAAGATGTGATAGGT...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CCA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCCTGAGTTCCAGAGAATaGAAAGTAGGAAGCTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: RSFKSATVESLWLNVHILLSSRE*KVGSYF Trigger: AAAATAGCTTCCTACTTTCCATTCTCTGGAACTCAG...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | GTACTTGGTGAATGGCTGCAGGAGCCGAGAAGCAGGTaGGACTGTGGCAAGAGATGCCAGGCTGGCGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VLGEWLQEPRSR*DCGKRCQAGAG Trigger: CCCAGCGCCAGCCTGGCATCTCTTGCCACAGTCCCACCTGCTTCTCGGCTCCTGCAGCCATTCACCAAGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | CCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATaGCCAGTGGCTAGGCCAGTGGCCAGTGGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PTPFRQGLSVAR*PVARPVASGPK Trigger: CTTGGGCCCACTGGCCACTGGCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | CATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTaGCTAGGCCAGTGGCCAGTGGGCCCAAGAGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: HLDRVSQWLDAQ*LGQWPVGPRGT Trigger: AGTACCTCTTGGGCCCACTGGCCACTGGCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | AAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTaGGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGLTCASSFPST*GKPLLTRSDVP Trigger: AGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | GATGTGCCTCACGAAGTAGCTGGCTGCCTGCCTCCTTaGCAGCAGGCATTTGGTGAACAAGCAGAAGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DVPHEVAGCLPP*QQAFGEQAEGP Trigger: TGGGCCTTCTGCTTGTTCACCAAATGCCTGCTGTCAAGGAGGCAGGCAGCCAGCTACTTCGTGAGGCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | GCCAGTGGCCAGTGGGCCCAAGAGGTACTCCTCTACTaGATCCCCAGTGCCTGCATTTCAAACACACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: ASGQWAQEVLLY*IPSACISNTHY Trigger: GTAGTGTGTGTTTGAAATGCAGGCACTGGGGATTCAGTAGAGGAGTACCTCTTGGGCCCACTGGCCACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | AATAAAGTAACAACCCTACCCTCACTGTGGGATAGGTaGTCTCAGCAGCTCCAAGGCCAGGCTTGGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NKVTTLPSLWDR*SQQLQGQAWKH Trigger: GTGCTTCCAAGCCTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTACTTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | CTACGCTGTAGGCATGGAGGAAGGTGTGACTCTACCTaGACTCAGAAGGGGACACTAAGAAGGAGATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRCRHGGRCDST*TQKGTLRRRWN Trigger: GTTCCATCTCCTTCTTAGTGTCCCCTTCTGAGTTCAGGTAGAGTCACACCTTCCTCCATGCCTACAGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | CCCTCTGGTAGCATGGCTATACCACCTACCAGGATATaGCTGGCTGCCCAATGCCAAGGTCATATATGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSGSMAIPPTRI*LAAQCQGHICD Trigger: ATCACATATATGACCTTGGCATTGGGCAGCCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | GAATACAAAGCAACTGAGCTGAAGAGAGAGTTTTCATaGCCAAGACGCTCTGAAGCCTCAGTAGGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: EYKATELKREFS*PRRSEASVGPP Trigger: GGGTGGCCCTACTGAGGCTTCAGAGCGTCTTGGGCATGAAAACTCTCTCTTCAGCTCAGTTGCTTTGTATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | GCTATACCACCTACCAGGATATGCCTGGCTGCCCAATaGCAAGGTCATATATGTGATCCCATCCTACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AIPPTRICLAAQ*QGHICDPILLK Trigger: CTTCAGTAGGATGGGATCACATATATGACCTTGGCATTGGGCAGCCAGGCATATCCTGGTAGGTGGTATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | ACTAAGAAGGAGATGGAACACACAGACCTTCCTACCTaGAGAAGTCAGACACTGTCCCTGAAAGGCTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TKKEMEHTDLPT*RSQTLSLKGLH Trigger: GTGCAAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCCATCTCCTTCTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGGCTCCAAGGCCAGGCTaGGAAGCACTTCTAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GNYIARNAQFYLGWTRDLAPRPG*EALLEG Trigger: CCCTTCTAGAAGTGCTTCCAAGCCTGGCCTTGGAGC...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | GGTTTGTGGGAAAGGCACATTTCCTGGGATGGAATGTaGTCTTCACCTTTAAGCCCATCTGAATTTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLWERHISWDGM*SSPLSPSEFPS Trigger: GCTGGGAAATTCAGATGGGCTTAAAGGTGAAGAGCACATTCCATCCCAGGAAATGTGCCTTTCCCACAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | ATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTaGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MKRNKVTTLPSL*DRCSQQLQGQA Trigger: AGCCTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | GACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTaGACACCTGATGTTTGCAATGTTTACAGTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DIGRTVLDRHPK*TPDVCNVYSSC Trigger: ACAGGAACTGTAAACATTGCAAACATCAGGTGTTCACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | CTGTCCCTGAAAGGCTTGCACGCATCTTTATTTACATaGAAATCACTGACAGAATCAGCCGCCTCAGCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSLKGLHASLFT*KSLTESAASAR Trigger: TCTCGCTGAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCTTTCAGGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | ATATTTTTAAAAAGCTCTACGAATGTACTTGGTGAATaGCTGCAGGAGCCGAGAAGCAGGTGGGACTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IFLKSSTNVLGE*LQEPRSRWDCG Trigger: GCCACAGTCCCACCTGCTTCTCGGCTCCTGCAGCCATTCACCAAGTACATTCGTAGAGCTTTTTAAAAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | CTGGCAGGTTTACTATCAAGCAGAGTAACAGGGTTCTaGTTTGTGGGAAAGGCACATTTCCTGGGATGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LAGLLSSRVTGF*FVGKAHFLGWN Trigger: ATTCCATCCCAGGAAATGTGCCTTTCCCACAAACCAGAACCCTGTTACTCTGCTTGATAGTAAACCTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | CTGGGATGGAATGTGCTCTTCACCTTTAAGCCCATCTaGATTTCCCAGCATAAGCTAATGTCTTGCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGWNVLFTFKPI*ISQHKLMSCMG Trigger: ACCCATGCAAGACATTAGCTTATGCTGGGAAATTCAGATGGGCTTAAAGGTGAAGAGCACATTCCATCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | TCTTCATTTTCCTTCCCTAAATATTCACTGGAGACATaGAGCACACCTTGCTCCAGAAGCAAGCTGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSFSFPKYSLET*STPCSRSKLQR Trigger: CCTTTGCAGCTTGCTTCTGGAGCAAGGTGTGCTTCATGTCTCCAGTGAATATTTAGGGAAGGAAAATGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | CAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTaGAAGGCTTGCACGCATCTTTATTTACATGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QTFLPGEVRHCP*KACTHLYLHEN Trigger: ATTTTCATGTAAATAAAGATGCGTGCAAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | ACACACATTCACCGAGGGCAACTACATAGCAAGGAATaGACAGTTTTATTTGGGGTGGACAAGAGATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: THIHRGQLHSKE*TVLFGVDKRFV Trigger: CACAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCCCTCGGTGAATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | CAGCATAAGCTAATGTCTTGCATGGGTCTTAGCCAGTaGTTCTTTCTCTACCTTCCTAATACTGCCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QHKLMSCMGLSQ*FFLYLPNTAIL Trigger: AAGGATGGCAGTATTAGGAAGGTAGAGAAAGAACCACTGGCTAAGACCCATGCAAGACATTAGCTTATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | AATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGTaGGTTTCCATAATGCTCCTTTCTCTATGCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NAQFYLGWTRDL*VSIMLLSLCLG Trigger: TCCCAGGCATAGAGAAAGGAGCATTATGGAAACCCACAAATCTCTTGTCCACCCCAAATAAAACTGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | CCCAATGCCAAGGTCATATATGTGATCCCATCCTACTaGAGAATACTGAGATTACCTATCACATCTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PNAKVIYVIPSY*RILRLPITSSA Trigger: TGCAGAAGATGTGATAGGTAATCTCAGTATTCTTCAGTAGGATGGGATCACATATATGACCTTGGCATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR TCA 72 bp | AAGGCTTGCACGCATCTTTATTTACATGAAAATCACTaGCAGAATCAGCCGCCTCAGCGAGACTTTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KACTHLYLHENH*QNQPPQRDFTK Trigger: TTTTGTAAAGTCTCGCTGAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | CTACTGAAGAATACTGAGATTACCTATCACATCTTCTaGAATCTTCAATCTCACACACATTCACCGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLKNTEITYHIF*NLQSHTHSPRA Trigger: TGCCCTCGGTGAATGTGTGTGAGATTGAAGATTGCAGAAGATGTGATAGGTAATCTCAGTATTCTTCAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CCA 72 bp | AACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTaGACAAGAGATTTGTGGGTTTCCATAATGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NYIARNAQFYLG*TRDLWVSIMLL Trigger: AAGGAGCATTATGGAAACCCACAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATAGGAAGCTATTTTCTTaGGATAAGCCTCAGATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDRKLFS*DKPQIK Trigger: CTTGATCTGAGGCTTATCCAAAGAAAATAGCTTCCT...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR GCA 72 bp | AGAGATTTGTGGGTTTCCATAATGCTCCTTTCTCTATaGCTGGGAGGATTTCAAACGACTTTTAATTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RDLWVSIMLLSL*LGGFQTTFNFL Trigger: TAAGAAATTAAAAGTCGTTTGAAATCCTCCCAGGCATAGAGAAAGGAGCATTATGGAAACCCACAAATCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | TCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCTCACGAAGCTTCGGGGTCCTGGTTaGAACGGCAGTACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAPEGSLSSPGLMCLTKLRGPG*NGSTWS Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAG...CTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | TCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCTCACGAAGTCTGCTTCGGGGTCCTaGTTGAAACGGCAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAPEGSLSSPGLMCLTKSASGS*LKRQYL Trigger: CAAGTACTGCCGTTTCAACCAGGACCCCGAAGCAGA...CTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGACACCCCCACAGCAATaGTCTTCCCATCGAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQTPPQQ*SSHRAS Trigger: ACTGGCTCGATGGGAAGATCATTGCTGTGGGGGTGT...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCCTTCGGGGTCCTGGTTaGAACGGCAGTACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGLRGPG*NGSTWS Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAG...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTCCTGAAATGTGGCTCTaGACTGAGGACTTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQRANLCIQLPEHLREASPEMWL*TEDLVE Trigger: CTCCACCAAGTCCTCAGTTCAGAGCCACATTTCAGG...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033139.15 |
||
| CDS-3UTR GCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGTGCCCAACTTGTTCTTaGAGTAGCCACACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQCPTCS*SSHTGR Trigger: CCTTCCAGTGTGGCTACTGCAAGAACAAGTTGGGCA...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQRANLCIQLPEHLREASLCLQW*AAKESC Trigger: ACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAG...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTTGCCATAGGAGCGACTaGCCAACTTGTTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQRANLCIQLPEHLREASCHRSD*PTCSCS Trigger: ACTGCAAGAACAAGTTGGGCAGTCGCTCCTATGGCA...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTAGAGAAGGCAGGCACTaGTCAATGGGCACCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTHRPSYLEKSDTVPERLREGRH*SMGTQT Trigger: TGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCT...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTCCTTGCTTTCCGACATaGAGGCTTACTCAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQRANLCIQLPEHLREASPCFPT*RLTQVS Trigger: GCTGACTTGAGTAAGCCTCCATGTCGGAAAGCAAGG...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTCACTGTCATGGAATGTaGCCACATGCCATAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTHRPSYLEKSDTVPERLHCHGM*PHAIGA Trigger: CGCTCCTATGGCATGTGGGCACATTCCATGACAGTG...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | TCCCGAGCACCTGAGGGAAGCCTCTCCTCACCAGGTCTGATGTGCCTCACGAAGCTCACCTCTAACTTGTaGGATGCATTTTCTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAPEGSLSSPGLMCLTKLTSNL*DAFSGK Trigger: TTTACCAGAAAATGCATCGCACAAGTTAGAGGTGAG...CTTCGTGAGGCACATCAGACCTGGTGAGGAGAGGCTTCCCTCAGGTGCTCGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGAGAGAAGGCAGGCACTaGTCAATGGGCACCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWREGRH*SMGTQT Trigger: TGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCT...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGTCTGAACTGAGGACTTaGTGGAGAAGATCTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQSELRT*WRRSYH Trigger: GTGGTAAGATCTTCTCCACCAAGTCCTCAGTTCAGA...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033139.15 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTAACTTTGATTGGATGTaGTGGTTCACCAGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQRANLCIQLPEHLREASNFDWM*WFTRAQ Trigger: TTGGGCTCTGGTGAACCATCACATCCAATCAAAGTT...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGCACTGTCATGGAATGTaGCCACATGCCATAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWHCHGM*PHAIGA Trigger: CGCTCCTATGGCATGTGGGCACATTCCATGACAGTG...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGGGCTTAGGACCAATATaGACTTTGATTGGATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQGLGPI*TLIGCD Trigger: ATCACATCCAATCAAAGTTCATATTGGTCCTAAGCC...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACACACCCCCACAGCAATaGTCTTCCCATCGAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAASARLYKNAKLGYFLDTPPQQ*SSHRAS Trigger: ACTGGCTCGATGGGAAGATCATTGCTGTGGGGGTGT...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCTCAGAAGGTCTATATTaGCCCTTGTATCTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGSEGLY*PLYLIL Trigger: CAAGATGAGATACAAGGGTCAATATAGACCTTCTGA...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGACCCAAAGACAGAAATaGATAATCAGGATCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQTQRQK*IIRIVV Trigger: TACTACGATCCTGATTATTCATTTCTGTCTTTGGGT...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGACATGAAGCACACCTTGCTCCAGAAGCAAGCTGCAAAGGACAAGTCCTTTCCTCATTTCCCTTaGTTTCCGACATGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGDMKHTLLQKQAAKDKSFPHFP*FPTWRL Trigger: AAGCCTCCATGTCGGAAAGCAAGGGAAATGAGGAAA...GGACTTGTCCTTTGCAGCTTGCTTCTGGAGCAAGGTGTGCTTCATGTCTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGCACTGGAAGGAGGTCTaGCCCTCAAAATACTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVHWKEV*PSKYST Trigger: TGTAGAGTATTTTGAGGGCCAGACCTCCTTCCAGTG...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGAATCCTGCACTGTCATaGAATGTGCCCACATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVNPALS*NVPTCH Trigger: ATGGCATGTGGGCACATTCCATGACAGTGCAGGATT...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGGAACTGAGGACTTGGTaGAGAAGATCTTACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWELRTW*RRSYHP Trigger: AGGGTGGTAAGATCTTCTCCACCAAGTCCTCAGTTC...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033139.15 |
||
| CDS-3UTR TCA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTAATCAAATCTTCCAGTaGCTTGGGCTGGTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GTHRPSYLEKSDTVPERLNQIFQ*LGLVGF Trigger: AAATCCAACCAGCCCAAGTCACTGGAAGATTTGATT...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAASARLYKNAKLGYFLDLCLQW*AAKESC Trigger: ACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAG...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACTGCCCAACTTGTTCTTaGAGTAGCCACACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAASARLYKNAKLGYFLDCPTCS*SSHTGR Trigger: CCTTCCAGTGTGGCTACTGCAAGAACAAGTTGGGCA...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | ATTAATGCAAAGTCACCGTCAACAGCATCCTCCACTGTAGAATCCATGGGCTCATGCCCAACTTGTTCTTaGAGTAGCCACACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: INAKSPSTASSTVESMGSCPTCS*SSHTGR Trigger: CCTTCCAGTGTGGCTACTGCAAGAACAAGTTGGGCA...TGAGCCCATGGATTCTACAGTGGAGGATGCTGTTGACGGTGACTTTGCATTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACTGCCATAGGAGCGACTaGCCAACTTGTTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAASARLYKNAKLGYFLDCHRSD*PTCSCS Trigger: ACTGCAAGAACAAGTTGGGCAGTCGCTCCTATGGCA...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGTTTCCTCATTTCCCTTaGTTTCCGACATGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWFPHFP*FPTWRL Trigger: AAGCCTCCATGTCGGAAAGCAAGGGAAATGAGGAAA...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGTATAAAGAAAAGGACTaGTTGAAGGATGAGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQYKEKD*LKDELN Trigger: GTTCAACTCATCCTTCAACCAGTCCTTTTCTTTATA...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGAATCAAATCTTCCAGTaGCTTGGGCTGGTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWNQIFQ*LGLVGF Trigger: AAATCCAACCAGCCCAAGTCACTGGAAGATTTGATT...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACGGACTGGTTGAAGGATaGGTTGAACTCTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKHTLPDPTFYMGSRELNGLVEG*VELWVL Trigger: GAGGACCCAGAGTTCAACTCATCCTTCAACCAGTCC...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035458.15 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGACATGAAGCACACCTTGCTCCAGAAGCAAGCTGCAAAGGACAAGTCCCTCACCTCTAACTTGTaGGATGCATTTTCTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGDMKHTLLQKQAAKDKSLTSNL*DAFSGK Trigger: TTTACCAGAAAATGCATCGCACAAGTTAGAGGTGAG...GGACTTGTCCTTTGCAGCTTGCTTCTGGAGCAAGGTGTGCTTCATGTCTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | CAAAAACAAACCCCTCTGGTAGCATGGCTATACCACCTACCAGGATATGCCTGGTCAGAAGGTCTATATTaGCCCTTGTATCTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKQTPLVAWLYHLPGYAWSEGLY*PLYLIL Trigger: CAAGATGAGATACAAGGGTCAATATAGACCTTCTGA...CCAGGCATATCCTGGTAGGTGGTATAGCCATGCTACCAGAGGGGTTTGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCCACTGGAAGGAGGTCTaGCCCTCAAAATACTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RLARIFIYMKITDRISRLHWKEV*PSKYST Trigger: TGTAGAGTATTTTGAGGGCCAGACCTCCTTCCAGTG...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCAATCCTGCACTGTCATaGAATGTGCCCACATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLARIFIYMKITDRISRLNPALS*NVPTCH Trigger: ATGGCATGTGGGCACATTCCATGACAGTGCAGGATT...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGCCTTGCTTTCCGACATaGAGGCTTACTCAAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNYIARNAQFYLGWTRDLPCFPT*RLTQVS Trigger: GCTGACTTGAGTAAGCCTCCATGTCGGAAAGCAAGG...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGCCTTGTATCTCATCTTaGGACAGGAATGAATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVPCISS*DRNECR Trigger: TCTACATTCATTCCTGTCCCAAGATGAGATACAAGG...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| 3UTR CAA 72 bp | TCCTCCACTGTAGAATCCATGGGCTCATCCTCACAATaGCCTTTCGAGATCTCTCCTTTAGCCAGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVESMGSSSQ*PFEISPLARNF Trigger: GAAATTTCTGGCTAAAGGAGAGATCTCGAAAGGCAATTGTGAGGATGAGCCCATGGATTCTACAGTGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| CDS-3UTR TCA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGAGCATGTTTGATCCATaGCAGGTTTGTACACATATT | + |
|
Preference number: 4 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVSMFDP*QVCTHI Trigger: AATATGTGTACAAACCTGTCATGGATCAAACATGCT...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACTCCAGTGACTTGGGCTaGTTGGATTTAGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKHTLPDPTFYMGSRELNSSDLG*LDLAFG Trigger: ACCAAAGGCTAAATCCAACCAGCCCAAGTCACTGGA...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGAACTTTGATTGGATGTaGTGGTTCACCAGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNYIARNAQFYLGWTRDLNFDWM*WFTRAQ Trigger: TTGGGCTCTGGTGAACCATCACATCCAATCAAAGTT...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | ATATCCAGCTTGTTAATTAATGCAAAGTCACCGTCAACAGCATCCTCCACTGTACACTGGAAGGAGGTCTaGCCCTCAAAATACTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ISSLLINAKSPSTASSTVHWKEV*PSKYST Trigger: TGTAGAGTATTTTGAGGGCCAGACCTCCTTCCAGTG...TACAGTGGAGGATGCTGTTGACGGTGACTTTGCATTAATTAACAAGCTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| 3UTR CAA 72 bp | GAGGGCAACTACATAGCAAGGAATGCACAGTTTTATTaGGGGTGGACAAGAGATTTGTGGGTTTCCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: EGNYIARNAQFY*GWTRDLWVSIM Trigger: CATTATGGAAACCCACAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACACCCAAAGACAGAAATaGATAATCAGGATCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SAASARLYKNAKLGYFLDTQRQK*IIRIVV Trigger: TACTACGATCCTGATTATTCATTTCTGTCTTTGGGT...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGGGCTTAGGACCAATATaGACTTTGATTGGATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GNYIARNAQFYLGWTRDLGLGPI*TLIGCD Trigger: ATCACATCCAATCAAAGTTCATATTGGTCCTAAGCC...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CCA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATTCCAGTGACTTGGGCTaGTTGGATTTAGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDSSDLG*LDLAFG Trigger: ACCAAAGGCTAAATCCAACCAGCCCAAGTCACTGGA...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGAGCATGTTTGATCCATaGCAGGTTTGTACACATATT | + |
|
Preference number: 4 (lower is better) Translates to: GNYIARNAQFYLGWTRDLSMFDP*QVCTHI Trigger: AATATGTGTACAAACCTGTCATGGATCAAACATGCT...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR TCA 90 bp | CTCTCTATGCTTCCTTTGAGGTCACTGAGTGTTTTGAGATCACACTTTATATCCAGCATGTTTGATCCATaGCAGGTTTGTACACATATT | + |
|
Preference number: 4 (lower is better) Translates to: LSMLPLRSLSVLRSHFISSMFDP*QVCTHI Trigger: AATATGTGTACAAACCTGTCATGGATCAAACATGCT...GGATATAAAGTGTGATCTCAAAACACTCAGTGACCTCAAAGGAAGCATAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| 3UTR CAA 72 bp | TCACTGAGTGTTTTGAGATCACACTTTATATCCAGCTaGTTAATTAATGCAAAGTCACCGTCAACAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSVLRSHFISS*LINAKSPSTAS Trigger: GGATGCTGTTGACGGTGACTTTGCATTAATTAACAAGCTGGATATAAAGTGTGATCTCAAAACACTCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATCCTTGTATCTCATCTTaGGACAGGAATGAATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDPCISS*DRNECR Trigger: TCTACATTCATTCCTGTCCCAAGATGAGATACAAGG...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | GTAACAACCCTACCCTCACTGTGGGATAGGTGCTCTCAGCAGCTCCAAGGCCAGGCTTCGGGGTCCTGGTaGAAACGGCAGTACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTTLPSLWDRCSQQLQGQASGSW*KRQYLE Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGC...CTGGCCTTGGAGCTGCTGAGAGCACCTATCCCACAGTGAGGGTAGGGTTGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS GCA 90 bp | GTGAAAGGAGCCATAACCACATTCTGGTCCATCAGCAGGGTGCTCTaGCTGGCTCACGGTTGGCTTATCAGGCGGGTCCTTGTGAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKGAITTFWSISRVL*LAHGWLIRRVLVNN Trigger: GTTGTTCACAAGGACCCGCCTGATAAGCCAACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGTTATGGCTCCTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
||
| CDS CCA 90 bp | CGGTCAAGTTCCTTACTGCGTCCTTCATCCTCTGCTTCGGGGTCCTaGTTGAAACGGCAGTACTTGGAGTTGTCCAGAGAAGGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSLLRPSSSASGS*LKRQYLELSREGRH Trigger: GTGCCTGCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGCAGAGGATGAAGGACGCAGTAAGGAACTTGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
||
| CDS CCA 90 bp | ACCACATTCTGGTCCATCAGCAGGGTGCTCTGCCTGGCTCACGGTTaGCTTATCAGGCGGGTCCTTGTGAACAACCATCTGGTAGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTFWSISRVLCLAHG*LIRRVLVNNHLVAF Trigger: AAACGCTACCAGATGGTTGTTCACAAGGACCCGCCTGATAAGCCAACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
||
| CDS GCA 90 bp | TCTGAACAGCAGCATCCTCTCCGAGCACTTCTGTCCTACGAGGTTTaGATACTCCAGCACACCAGCCTCCTCACTTGGGTCTTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQQHPLRALLSYEV*ILQHTSLLTWVFLV Trigger: CACCAAGAAGACCCAAGTGAGGAGGCTGGTGTGCTGGAGTATGCAAACCTCGTAGGACAGAAGTGCTCGGAGAGGATGCTGCTGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS-3UTR CAA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTCACCAGCCTCCTCACTaGGGTCTTCTTGGTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQRANLCIQLPEHLREASHQPPH*GLLGDS Trigger: AGAATCACCAAGAAGACCCAAGTGAGGAGGCTGGTG...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS GCA 90 bp | TCCTCGGTCTATAAGATCCTGATAATCCTGCACTGTCATGGAATGTaGCCACATGCCACACGACGTCTTGCCCTCCCTGGACTCGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSVYKILIILHCHGM*PHATRRLALPGLAV Trigger: TACTGCGAGTCCAGGGAGGGCAAGACGTCGTGTGGCATGTGGGCACATTCCATGACAGTGCAGGATTATCAGGATCTTATAGACCGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094017.5 ENSMUST00000178534.8 |
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| CDS CCA 90 bp | AACGGCAGTACTTGGAGTTGTCCAGAGAAGGCAGGCACTGCTCAATaGGCACCCAGACATACGTCTCAGGACACAGCAAATCAGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NGSTWSCPEKAGTAQ*APRHTSQDTANQKV Trigger: GACCTTCTGATTTGCTGTGTCCTGAGACGTATGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCTGGACAACTCCAAGTACTGCCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS GCA 90 bp | TGGTTGAAACGGCAGTACTTGGAGTTGTCCAGAGAAGGCAGGCACTaGTCAATGGGCACCCAGACATACGTCTCAGGACACAGCAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: WLKRQYLELSREGRH*SMGTQTYVSGHSKS Trigger: TGATTTGCTGTGTCCTGAGACGTATGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS-3UTR CAA 90 bp | GTCCAACTCCATTTAGACAGGGTCTCTCAGTGGCTCGATGCCCAGTGGCTAGGCAAGGATGACACCTTATaGTATACTGAGGACAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VQLHLDRVSQWLDAQWLGKDDTL*YTEDSM Trigger: CATGCTGTCCTCAGTATACAATAAGGTGTCATCCTT...GCCTAGCCACTGGGCATCGAGCCACTGAGAGACCCTGTCTAAATGGAGTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTTTGAAACGGCAGTACTaGGAGTTGTCCAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTHRPSYLEKSDTVPERLLKRQY*ELSREG Trigger: GCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAA...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS TCA 90 bp | ATAACCACATTCTGGTCCATCAGCAGGGTGCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGTAAACTGGCTCACGGTTGGCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: ITTFWSISRVLCLQW*AAKESCKLAHGWLI Trigger: GATAAGCCAACCGTGAGCCAGTTTACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000094017.5 |
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| CDS-3UTR CAA 90 bp | AAACAAAGGGCTAACCTGTGCATCCAGCTTCCCGAGCACCTGAGGGAAGCCTCTAGGTCACTGAGTGTTTaGAGATCACACTTTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: KQRANLCIQLPEHLREASRSLSV*RSHFIS Trigger: GGATATAAAGTGTGATCTCAAAACACTCAGTGACCT...AGAGGCTTCCCTCAGGTGCTCGGGAAGCTGGATGCACAGGTTAGCCCTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACGCTTCGGGGTCCTGGTaGAAACGGCAGTACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKHTLPDPTFYMGSRELNASGSW*KRQYLE Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGC...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACCACCAGCCTCCTCACTaGGGTCTTCTTGGTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAASARLYKNAKLGYFLDHQPPH*GLLGDS Trigger: AGAATCACCAAGAAGACCCAAGTGAGGAGGCTGGTG...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS TCA 90 bp | TCTGGTAGCGTTTATAGACCTGGTAAGACTCCTGAAATGTGGCTCTaGACTGAGGACTTGGTGGAGAAGATCTTACCACCCTCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SGSVYRPGKTPEMWL*TEDLVEKILPPSPL Trigger: TAGAGGTGAGGGTGGTAAGATCTTCTCCACCAAGTCCTCAGTTCAGAGCCACATTTCAGGAGTCTTACCAGGTCTATAAACGCTACCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033139.15 ENSMUST00000094017.5 ENSMUST00000207041.2 ENSMUST00000216011.2 |
||
| CDS-3UTR CAA 90 bp | GGAACACACAGACCTTCCTACCTGGAGAAGTCAGACACTGTCCCTGAAAGGCTTCTCACTTGGGTCTTCTaGGTGATTCTTATAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: GTHRPSYLEKSDTVPERLLTWVF*VILINT Trigger: GGTGTTTATAAGAATCACCAAGAAGACCCAAGTGAG...AAGCCTTTCAGGGACAGTGTCTGACTTCTCCAGGTAGGAAGGTCTGTGTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS TCA 90 bp | AGCCCCTTTGCCTGGCTTAGGACCAATATGAACTTTGATTGGATGTaGTGGTTCACCAGAGCCCAACTTCTCCTCTATAGATTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPFAWLRTNMNFDWM*WFTRAQLLLYRLWM Trigger: CATCCACAATCTATAGAGGAGAAGTTGGGCTCTGGTGAACCATCACATCCAATCAAAGTTCATATTGGTCCTAAGCCAGGCAAAGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS CCA 90 bp | CCTCACTTGGGTCTTCTTGGTGATTCTTATAAACACCGTAAGGCATaGCAGATCGTCTGTGAAACACCCTTAGTCGGTCAAGTTCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PHLGLLGDSYKHRKA*QIVCETPLVGQVPY Trigger: GTAAGGAACTTGACCGACTAAGGGTGTTTCACAGACGATCTGCCATGCCTTACGGTGTTTATAAGAATCACCAAGAAGACCCAAGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS-3UTR CAA 90 bp | AGCATCCTCCACTGTAGAATCCATGGGCTCATCCTCACAATTGCCTTTCGAGATCTGAGGACAGCATGTTaGATCCATGACAGGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SILHCRIHGLILTIAFRDLRTAC*IHDRFV Trigger: TACAAACCTGTCATGGATCAAACATGCTGTCCTCAG...ATCTCGAAAGGCAATTGTGAGGATGAGCCCATGGATTCTACAGTGGAGGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCTTGAAACGGCAGTACTaGGAGTTGTCCAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLARIFIYMKITDRISRLLKRQY*ELSREG Trigger: GCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAA...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGCTCACTTGGGTCTTCTaGGTGATTCTTATAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVLTWVF*VILINT Trigger: GGTGTTTATAAGAATCACCAAGAAGACCCAAGTGAG...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACTGGTTGAAGGATGAGTaGAACTCTGGGTCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAASARLYKNAKLGYFLDWLKDE*NSGSSK Trigger: CTTTGAGGACCCAGAGTTCAACTCATCCTTCAACCA...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | TCAGCCGCCTCAGCGAGACTTTACAAAAATGCCAAGTTGGGATACTTTCTTGACCTGAGGACAGCATGTTaGATCCATGACAGGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAASARLYKNAKLGYFLDLRTAC*IHDRFV Trigger: TACAAACCTGTCATGGATCAAACATGCTGTCCTCAG...GTCAAGAAAGTATCCCAACTTGGCATTTTTGTAAAGTCTCGCTGAGGCGGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGAGGTCACTGAGTGTTTaGAGATCACACTTTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVRSLSV*RSHFIS Trigger: GGATATAAAGTGTGATCTCAAAACACTCAGTGACCT...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | TTATGCCAAGACAACAGACATAGGCAGGACAGTCCTGGACAGACACCCAAAGTGAAAGAAAAGGACTGGTaGAAGGATGAGTTGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCQDNRHRQDSPGQTPKVKEKDW*KDELNS Trigger: AGAGTTCAACTCATCCTTCAACCAGTCCTTTTCTTT...CACTTTGGGTGTCTGTCCAGGACTGTCCTGCCTATGTCTGTTGTCTTGGCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035458.15 |
||
| CDS TCA 90 bp | ATAACCACATTCTGGTCCATCAGCAGGGTGCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGTAAACTCAGACTTTTCACATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITTFWSISRVLCLQW*AAKESCKLRLFTYF Trigger: GAAATATGTGAAAAGTCTGAGTTTACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035458.15 ENSMUST00000178534.8 ENSMUST00000216011.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGCACGCATCTTTATTTACATGAAAATCACTGACAGAATCAGCCGCCTCCTCTCTATGCTTCCTTaGAGGTCACTGAGTGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLARIFIYMKITDRISRLLSMLP*RSLSVL Trigger: CAAAACACTCAGTGACCTCAAAGGAAGCATAGAGAG...GAGGCGGCTGATTCTGTCAGTGATTTTCATGTAAATAAAGATGCGTGCAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS-3UTR CAA 90 bp | GGCAACTACATAGCAAGGAATGCACAGTTTTATTTGGGGTGGACAAGAGATTTGAGTGACTTGGGCTGGTaGGATTTAGCCTTTGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GNYIARNAQFYLGWTRDLSDLGW*DLAFGN Trigger: GTTACCAAAGGCTAAATCCAACCAGCCCAAGTCACT...CAAATCTCTTGTCCACCCCAAATAAAACTGTGCATTCCTTGCTATGTAGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
||
| CDS TCA 90 bp | ACCACCCTCACCTCTAACTTGTGCGATGCATTTTCTGGTAAAGATTaGAAAATCAAATCTTCCAGTGACTTGGGCTGGTTGGATTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLTSNLCDAFSGKD*KIKSSSDLGWLDLA Trigger: GGCTAAATCCAACCAGCCCAAGTCACTGGAAGATTTGATTTTTCAATCTTTACCAGAAAATGCATCGCACAAGTTAGAGGTGAGGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033139.15 ENSMUST00000094017.5 ENSMUST00000216011.2 |
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| CDS-3UTR CAA 90 bp | GATAACTCTGGGGCACAAGGGAACACTAGTGACAAGGAAAACAATTATGCCAAGAAGGATGACACCTTATaGTATACTGAGGACAGCATG | + |
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Preference number: 5 (lower is better) Translates to: DNSGAQGNTSDKENNYAKKDDTL*YTEDSM Trigger: CATGCTGTCCTCAGTATACAATAAGGTGTCATCCTT...CTTGGCATAATTGTTTTCCTTGTCACTAGTGTTCCCTTGTGCCCCAGAGTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS TCA 90 bp | AAGGATGACACCTTATTGTATACTGAGGACAGCATGTTTGATCCATaGCAGGTTTGTACACATATTTCCCACTTCTTCTCCATCCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: KDDTLLYTEDSMFDP*QVCTHISHFFSILG Trigger: ACCGAGGATGGAGAAGAAGTGGGAAATATGTGTACAAACCTGTCATGGATCAAACATGCTGTCCTCAGTATACAATAAGGTGTCATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS TCA 90 bp | ACTAGCCTCACCTCTAACTTGTGCGATGCATTTTCTGGTAAAGATTaGAAAATCAAATCTTCCAGTGACTTGGGCTGGTTGGATTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: TSLTSNLCDAFSGKD*KIKSSSDLGWLDLA Trigger: GGCTAAATCCAACCAGCCCAAGTCACTGGAAGATTTGATTTTTCAATCTTTACCAGAAAATGCATCGCACAAGTTAGAGGTGAGGCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035458.15 ENSMUST00000178534.8 |
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| CDS-3UTR CAA 90 bp | GATAACTCTGGGGCACAAGGGAACACTAGTGACAAGGAAAACAATTATGCCAAGATAATAATAGCTGAGTaGCGATGTTTTCTCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: DNSGAQGNTSDKENNYAKIIIAE*RCFLMQ Trigger: CTGCATGAGAAAACATCGCAACTCAGCTATTATTAT...CTTGGCATAATTGTTTTCCTTGTCACTAGTGTTCCCTTGTGCCCCAGAGTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | GGAGTGATTTTTATGAAAAGAAATAAAGTAACAACCCTACCCTCACTGTGGGATCTCTCTATGCTTCCTTaGAGGTCACTGAGTGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: GVIFMKRNKVTTLPSLWDLSMLP*RSLSVL Trigger: CAAAACACTCAGTGACCTCAAAGGAAGCATAGAGAG...ATCCCACAGTGAGGGTAGGGTTGTTACTTTATTTCTTTTCATAAAAATCACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | TTCAAACACACACTACCAGACCCAACATTTTACATGGGCTCTAGAGAACTGAACATAATAATAGCTGAGTaGCGATGTTTTCTCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: FKHTLPDPTFYMGSRELNIIIAE*RCFLMQ Trigger: CTGCATGAGAAAACATCGCAACTCAGCTATTATTAT...GTTCAGTTCTCTAGAGCCCATGTAAAATGTTGGGTCTGGTAGTGTGTGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS-3UTR CAA 90 bp | CGTTCTTTTAAGTCAGCCACAGTAGAATCACTTTGGTTAAATGTTCATATTCTCCTGAGGACAGCATGTTaGATCCATGACAGGTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: RSFKSATVESLWLNVHILLRTAC*IHDRFV Trigger: TACAAACCTGTCATGGATCAAACATGCTGTCCTCAG...GAGAATATGAACATTTAACCAAAGTGATTCTACTGTGGCTGACTTAAAAGAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 |
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| CDS CCA 72 bp | AATGTGCCCACATGCCACACGACGTCTTGCCCTCCCTaGACTCGCAGTAGCCGCAGTAGTAGCCGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NVPTCHTTSCPP*TRSSRSSSRPS Trigger: TGAAGGCCGGCTACTACTGCGGCTACTGCGAGTCCAGGGAGGGCAAGACGTCGTGTGGCATGTGGGCACATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094017.5 ENSMUST00000178534.8 |
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| CDS GCA 72 bp | GCCATAACCACATTCTGGTCCATCAGCAGGGTGCTCTaGCTGGCTCACGGTTGGCTTATCAGGCGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: AITTFWSISRVL*LAHGWLIRRVL Trigger: AAGGACCCGCCTGATAAGCCAACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGTTATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
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| CDS CCA 72 bp | TGGTCCATCAGCAGGGTGCTCTGCCTGGCTCACGGTTaGCTTATCAGGCGGGTCCTTGTGAACAACCATCTG | + |
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Preference number: 6 (lower is better) Translates to: WSISRVLCLAHG*LIRRVLVNNHL Trigger: CAGATGGTTGTTCACAAGGACCCGCCTGATAAGCCAACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
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| CDS CAA 72 bp | CTGGTCCATCAGCAGGGTGCTCTGCCTGGCTCACGGTaGGCTTATCAGGCGGGTCCTTGTGAACAACCATCT | + |
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Preference number: 6 (lower is better) Translates to: LVHQQGALPGSR*AYQAGPCEQPS Trigger: AGATGGTTGTTCACAAGGACCCGCCTGATAAGCCAACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
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| CDS GCA 72 bp | CCCACATGCCATAGGAGCGACTGCCCAACTTGTTCTTaGAGTAGCCACACTGGAAGGAGGTCTGGCCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: PTCHRSDCPTCS*SSHTGRRSGPQ Trigger: TTGAGGGCCAGACCTCCTTCCAGTGTGGCTACTGCAAGAACAAGTTGGGCAGTCGCTCCTATGGCATGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000216011.2 |
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| CDS GCA 72 bp | CGGCAGTACTTGGAGTTGTCCAGAGAAGGCAGGCACTaGTCAATGGGCACCCAGACATACGTCTCAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: RQYLELSREGRH*SMGTQTYVSGH Trigger: GTGTCCTGAGACGTATGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCTGGACAACTCCAAGTACTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS GCA 72 bp | CCTGATAATCCTGCACTGTCATGGAATGTGCCCACATaGCACACGACGTCTTGCCCTCCCTGGACTCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PDNPALSWNVPT*HTTSCPPWTRS Trigger: ACTGCGAGTCCAGGGAGGGCAAGACGTCGTGTGGCATGTGGGCACATTCCATGACAGTGCAGGATTATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094017.5 ENSMUST00000178534.8 |
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| CDS CCA 72 bp | CCAGTACTGCTGGTGAAAGGAGCCATAACCACATTCTaGTCCATCAGCAGGGTGCTCTGCCTGGCTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: PVLLVKGAITTF*SISRVLCLAHG Trigger: ACCGTGAGCCAGGCAGAGCACCCTGCTGATGGACCAGAATGTGGTTATGGCTCCTTTCACCAGCAGTACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207041.2 |
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| CDS CAA 90 bp | TCAAGTTCCTTACTGCGTCCTTCATCCTCTGCTTCGGGGTCCTGGTaGAAACGGCAGTACTTGGAGTTGTCCAGAGAAGGCAGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSLLRPSSSASGSW*KRQYLELSREGRHC Trigger: GCAGTGCCTGCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGCAGAGGATGAAGGACGCAGTAAGGAACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS GCA 72 bp | TTCCCACTTCATAGGAGCGACTGCCCAACTTGTTCTTaGAGTAGCCACACTGGAAGGAGGTCTGGCCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: FPLHRSDCPTCS*SSHTGRRSGPQ Trigger: TTGAGGGCCAGACCTCCTTCCAGTGTGGCTACTGCAAGAACAAGTTGGGCAGTCGCTCCTATGAAGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207141.2 |
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| CDS CAA 72 bp | TTACTGCGTCCTTCATCCTCTGCTTCGGGGTCCTGGTaGAAACGGCAGTACTTGGAGTTGTCCAGAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLRPSSSASGSW*KRQYLELSREG Trigger: GCCTTCTCTGGACAACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGCAGAGGATGAAGGACGCAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | TTCTGGTCCATCAGCAGGGTGCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGTAAACTGGCTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: FWSISRVLCLQW*AAKESCKLAHG Trigger: ACCGTGAGCCAGTTTACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAGCACCCTGCTGATGGACCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033139.15 ENSMUST00000094017.5 |
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| CDS TCA 72 bp | CACAGTACGGGAGAATGTCTAACACCCCCACAGCAATaGTCTTCCCATCGAGCCAGTACTGCTGGTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSTGECLTPPQQ*SSHRASTAGER Trigger: CCTTTCACCAGCAGTACTGGCTCGATGGGAAGATCATTGCTGTGGGGGTGTTAGACATTCTCCCGTACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS CCA 72 bp | ACTTGGAGTTGTCCAGAGAAGGCAGGCACTGCTCAATaGGCACCCAGACATACGTCTCAGGACACAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: TWSCPEKAGTAQ*APRHTSQDTAN Trigger: ATTTGCTGTGTCCTGAGACGTATGTCTGGGTGCCCATTGAGCAGTGCCTGCCTTCTCTGGACAACTCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS CCA 72 bp | TCCTTACTGCGTCCTTCATCCTCTGCTTCGGGGTCCTaGTTGAAACGGCAGTACTTGGAGTTGTCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLLRPSSSASGS*LKRQYLELSRE Trigger: TTCTCTGGACAACTCCAAGTACTGCCGTTTCAACCAGGACCCCGAAGCAGAGGATGAAGGACGCAGTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS CAA 90 bp | GAGGTTTGCATACTCCAGCACACCAGCCTCCTCACTTGGGTCTTCTaGGTGATTCTTATAAACACCGTAAGGCATGGCAGATCGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EVCILQHTSLLTWVF*VILINTVRHGRSSV Trigger: CACAGACGATCTGCCATGCCTTACGGTGTTTATAAGAATCACCAAGAAGACCCAAGTGAGGAGGCTGGTGTGCTGGAGTATGCAAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | TTCTGGTCCATCAGCAGGGTGCTCTGCCTCCAATGGTaGGCTGCAAAGGAATCTTGTAAACTCAGACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: FWSISRVLCLQW*AAKESCKLRLF Trigger: GAAAAGTCTGAGTTTACAAGATTCCTTTGCAGCTCACCATTGGAGGCAGAGCACCCTGCTGATGGACCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035458.15 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | GTTTATAGACCTGGTAAGACTCCTGAAATGTGGCTCTaGACTGAGGACTTGGTGGAGAAGATCTTACCACCC | + |
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Preference number: 6 (lower is better) Translates to: VYRPGKTPEMWL*TEDLVEKILPP Trigger: GGGTGGTAAGATCTTCTCCACCAAGTCCTCAGTTCAGAGCCACATTTCAGGAGTCTTACCAGGTCTATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033139.15 ENSMUST00000094017.5 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS GCA 72 bp | TATAAGATCCTGATAATCCTGCACTGTCATGGAATGTaGCCACATGCCATAGGAGCGACTGCCCAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: YKILIILHCHGM*PHAIGATAQLV Trigger: AACAAGTTGGGCAGTCGCTCCTATGGCATGTGGGCACATTCCATGACAGTGCAGGATTATCAGGATCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | GCCTGGCTTAGGACCAATATGAACTTTGATTGGATGTaGTGGTTCACCAGAGCCCAACTTCTCCTCTATAGA | + |
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Preference number: 6 (lower is better) Translates to: AWLRTNMNFDWM*WFTRAQLLLYR Trigger: TCTATAGAGGAGAAGTTGGGCTCTGGTGAACCATCACATCCAATCAAAGTTCATATTGGTCCTAAGCCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS CCA 72 bp | GGTCTTCTTGGTGATTCTTATAAACACCGTAAGGCATaGCAGATCGTCTGTGAAACACCCTTAGTCGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: GLLGDSYKHRKA*QIVCETPLVGQ Trigger: TTGACCGACTAAGGGTGTTTCACAGACGATCTGCCATGCCTTACGGTGTTTATAAGAATCACCAAGAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | ACCTCTAACTTGTGCGATGCATTTTCTGGTAAAGATTaGAAAATCAAATCTTCCAGTGACTTGGGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TSNLCDAFSGKD*KIKSSSDLGWL Trigger: CAACCAGCCCAAGTCACTGGAAGATTTGATTTTTCAATCTTTACCAGAAAATGCATCGCACAAGTTAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS CAA 72 bp | AGGATGACACCTTATTGTATACTGAGGACAGCATGTTaGATCCATGACAGGTTTGTACACATATTTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: RMTPYCILRTAC*IHDRFVHIFPT Trigger: AGTGGGAAATATGTGTACAAACCTGTCATGGATCAAACATGCTGTCCTCAGTATACAATAAGGTGTCATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS TCA 72 bp | TCACCAGAGCCCAACTTCTCCTCTATAGATTGTGGATaGATGAATTCTTTAGACCCTTCTTTCTTTATACTC | + |
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Preference number: 6 (lower is better) Translates to: SPEPNFSSIDCG*MNSLDPSFFIL Trigger: GAGTATAAAGAAAGAAGGGTCTAAAGAATTCATTCATCCACAATCTATAGAGGAGAAGTTGGGCTCTGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS GCA 72 bp | GAATCTTGTAAACTCAGACTTTTCACATATTTCAGGTaGTTCCTGGTGTATAGCCACTTGATACTTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: ESCKLRLFTYFR*FLVYSHLILGI Trigger: TATACCAAGTATCAAGTGGCTATACACCAGGAAGCACCTGAAATATGTGAAAAGTCTGAGTTTACAAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035458.15 ENSMUST00000178534.8 ENSMUST00000216011.2 |
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| CDS CAA 90 bp | CTTGGGACAGGAATGAATGTAGAAACCCATATAATAATAGCTGAGTaGCGATGTTTTCTCATGCAGTTGTCTAGTAAAAGCAATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGTGMNVETHIIIAE*RCFLMQLSSKSNFS Trigger: AGAGAAATTGCTTTTACTAGACAACTGCATGAGAAAACATCGCAACTCAGCTATTATTATATGGGTTTCTACATTCATTCCTGTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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| CDS CCA 72 bp | AATCAGAAGGTCTATATTGACCCTTGTATCTCATCTTaGGACAGGAATGAATGTAGAAACCCATATAATAAT | + |
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Preference number: 6 (lower is better) Translates to: NQKVYIDPCISS*DRNECRNPYNN Trigger: ATTATTATATGGGTTTCTACATTCATTCCTGTCCCAAGATGAGATACAAGGGTCAATATAGACCTTCTGATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033139.15 ENSMUST00000035458.15 ENSMUST00000094017.5 ENSMUST00000178534.8 ENSMUST00000207041.2 ENSMUST00000216011.2 |
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