Pregenerated sensors for ATCAY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034958Ensembl transcript IDs: ENSMUST00000047408.6, ENSMUST00000146030.8
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGCAAGGAGGTGGATGGAGCAGGTGGCCCCCACTGGAGTTCCTaGGCTTGGAGGCAGGACCTTAGACCTTTGGGGACAGCAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: GSKEVDGAGGPHWSS*AWRQDLRPLGTAGL Trigger: CAACCCTGCTGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATCCACCTCCTTGCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GCATGCCATGGCAGCAAGGAGGTGGATGGAGCAGGTGGCCCCCACTaGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACCTTTGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: ACHGSKEVDGAGGPH*SSWAWRQDLRPLGT Trigger: TGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATCCACCTCCTTGCTGCCATGGCATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | TGGCAGGGAGAGGGGACAGTGGGTCACATTCCACAGAGAAGCAGATaGAGCTGCAGCCAGGGCCACCAGACATCTGAGGCTCCAGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: WQGEGTVGHIPQRSR*SCSQGHQTSEAPAR Trigger: CCTAGCTGGAGCCTCAGATGTCTGGTGGCCCTGGCTGCAGCTGCATCTGCTTCTCTGTGGAATGTGACCCACTGTCCCCTCTCCCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | TGCAGCCAGGGCCACCAGACATCTGAGGCTCCAGCTAGGGACAGGTaGCAACCGAGCAAAGGGTCTCTCATTGGGTCAGCCCAAAATGCA | + |
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Preference number: 1 (lower is better) Translates to: CSQGHQTSEAPARDR*QPSKGSLIGSAQNA Trigger: TGCATTTTGGGCTGACCCAATGAGAGACCCTTTGCTCGGTTGCCACCTGTCCCTAGCTGGAGCCTCAGATGTCTGGTGGCCCTGGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GTGCATGTCAGGTGGAGATGTGAGGTCAGCAGTCACAACCCTGCCTaGGGTGGCAGGGAGAGGGGACAGTGGGTCACATTCCACAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: VHVRWRCEVSSHNPA*GGRERGQWVTFHRE Trigger: TTCTCTGTGGAATGTGACCCACTGTCCCCTCTCCCTGCCACCCCAGGCAGGGTTGTGACTGCTGACCTCACATCTCCACCTGACATGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACCTTTaGGGACAGCAGGGTTGTGTCCATTCATCCATCCATCCATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: APTGVPGLGGRTLDL*GQQGCVHSSIHPSQ Trigger: CTGGGATGGATGGATGGATGAATGGACACAACCCTGCTGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR TCA 90 bp | CCAAAGACAGTCAAATGGCAGAATAGTGCATGTCAGGTGGAGATGTaGGGTCAGCAGTCACAACCCTGCCTGGGGTGGCAGGGAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: PKTVKWQNSACQVEM*GQQSQPCLGWQGEG Trigger: CCCCTCTCCCTGCCACCCCAGGCAGGGTTGTGACTGCTGACCTCACATCTCCACCTGACATGCACTATTCTGCCATTTGACTGTCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | GCTCGGAGTCTCTGCTCTTCATATTGCAGGACACAGTCTGGCAGCTaGACGTGTTCCATGGGAATCAGTCGCTCCAGCTCTTCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ARSLCSSYCRTQSGS*TCSMGISRSSSSRL Trigger: CAGCCTGGAAGAGCTGGAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | GGCCGTGTGCTCTCCCTCTTGGCTCGGAGTCTCTGCTCTTCATATTaGAGGACACAGTCTGGCAGCTGCACGTGTTCCATGGGAATCAGT | + |
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Preference number: 1 (lower is better) Translates to: GRVLSLLARSLCSSY*RTQSGSCTCSMGIS Trigger: ACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACACGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GAAGGCCCCCAAAGACAGTCAAATGGCAGAATAGTGCATGTCAGGTaGAGATGTGAGGTCAGCAGTCACAACCCTGCCTGGGGTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: EGPQRQSNGRIVHVR*RCEVSSHNPAWGGR Trigger: CCTGCCACCCCAGGCAGGGTTGTGACTGCTGACCTCACATCTCCACCTGACATGCACTATTCTGCCATTTGACTGTCTTTGGGGGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR TCA 90 bp | GTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGTaGAAGGGTCAAGAACCTGCTCCATTCCGAGATGTGCTCATACCG | + |
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Preference number: 1 (lower is better) Translates to: VALPTSTFGIHKPRL*KGQEPAPFRDVLIP Trigger: CGGTATGAGCACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR TCA 90 bp | TGGATCCTGGGTGTCTCAGTAAAGAAATGGAACAGCCCTTCCCCATaGGGCTGCTGGACCTCTGTGTCTTGCCTCACTGTCCCCCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: WILGVSVKKWNSPSP*GCWTSVSCLTVPQV Trigger: TACCTGGGGGACAGTGAGGCAAGACACAGAGGTCCAGCAGCCTCATGGGGAAGGGCTGTTCCATTTCTTTACTGAGACACCCAGGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | CCTCTTGGCTCGGAGTCTCTGCTCTTCATATTGCAGGACACAGTCTaGCAGCTGCACGTGTTCCATGGGAATCAGTCGCTCCAGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PLGSESLLFILQDTV*QLHVFHGNQSLQLF Trigger: GAAGAGCTGGAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | TATTGGCAGGACACTCTGATTCTCTCTAGGTGGAAGCTGCTGTCCTaGGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCAGAGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: YWQDTLILSRWKLLS*GHQRPRSKKHVRGD Trigger: GTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCTAGAGAGAATCAGAGTGTCCTGCCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | AACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTaGCACAGAGTAGCTCTGGTTGTGGTGTGTTTCCTGCAGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: NKKHCFALLSRVPSR*HRVALVVVCFLQSS Trigger: TGAGCTCTGCAGGAAACACACCACAACCAGAGCTACTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | GATGTAGTGATAGTCTGGGGAGCTGCTATCTGGCAGGAAGCAGGCTaGAAACACGATGATGGCGTTGAGACCTTCCCCGTAGTATCCTCC | + |
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Preference number: 1 (lower is better) Translates to: DVVIVWGAAIWQEAG*KHDDGVETFPVVSS Trigger: GGAGGATACTACGGGGAAGGTCTCAACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTATCACTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GCTCTTCATATTGCAGGACACAGTCTGGCAGCTGCACGTGTTCCATaGGAATCAGTCGCTCCAGCTCTTCCAGGCTGTGCACGTACTGAA | + |
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Preference number: 1 (lower is better) Translates to: ALHIAGHSLAAARVP*ESVAPALPGCARTE Trigger: TTCAGTACGTGCACAGCCTGGAAGAGCTGGAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | AGACTATGTAGTCATCTCGGGCAGACATGTGCTTTGAGCCCAGCTTaGAGATCAGGTGGTCGCAGCATCCCACCCACCAGGATATACTGT | + |
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Preference number: 1 (lower is better) Translates to: RLCSHLGQTCALSPA*RSGGRSIPPTRIYC Trigger: ACAGTATATCCTGGTGGGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGCCCGAGATGACTACATAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | AATGGCCGGGAGATGGCCAACACAGTGCGAATGAACCAGGAGGGGTaGACGATGATCAGGGACTTTAGATTCTTCCTCAGTCTCCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: NGREMANTVRMNQEG*TMIRDFRFFLSLLS Trigger: TGACAGGAGACTGAGGAAGAATCTAAAGTCCCTGATCATCGTCCACCCCTCCTGGTTCATTCGCACTGTGTTGGCCATCTCCCGGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | TTTGGGGACTGTCCCCACCGTCTCTGTGTTTATAACTGCACAATTTaGTGGTGGGCGGTGGACACTGTTGCTCTGGGTCACTTGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: FGDCPHRLCVYNCTI*WWAVDTVALGHLPN Trigger: ATTTGGCAAGTGACCCAGAGCAACAGTGTCCACCGCCCACCAGCAAATTGTGCAGTTATAAACACAGAGACGGTGGGGACAGTCCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | AAACAGGTCCGCACTGTCACCAGGCATGTTTTTGGCGGTGGCCACTaGGGTGTCATCTTCCCACTCAAGTTCATTGCCATTTCCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KQVRTVTRHVFGGGH*GVIFPLKFIAISQE Trigger: TTCTTGGGAAATGGCAATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAAAACATGCCTGGTGACAGTGCGGACCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | TTTTGGCGGTGGCCACTGGGGTGTCATCTTCCCACTCAAGTTCATTaGCATTTCCCAAGAACTCCAGAGAGTCAGTTTCATCTGGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: FWRWPLGCHLPTQVH*HFPRTPESQFHLAS Trigger: AGACGCCAGATGAAACTGACTCTCTGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GAAGAGATTCTCCATGATGTAGTGATAGTCTGGGGAGCTGCTATCTaGCAGGAAGCAGGCTGCAAACACGATGATGGCGTTGAGACCTTC | + |
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Preference number: 1 (lower is better) Translates to: EEILHDVVIVWGAAI*QEAGCKHDDGVETF Trigger: GAAGGTCTCAACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTATCACTACATCATGGAGAATCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR TCA 90 bp | TCCATGGGAATCAGTCGCTCCAGCTCTTCCAGGCTGTGCACGTACTaGATTTTACTGATGAACTTGACACTGATGAATGGCCGGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: SMGISRSSSSRLCTY*ILLMNLTLMNGREM Trigger: CATCTCCCGGCCATTCATCAGTGTCAAGTTCATCAGTAAAATTCAGTACGTGCACAGCCTGGAAGAGCTGGAGCGACTGATTCCCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | GCTGATGACGTACAGGAAGAGATTCTCCATGATGTAGTGATAGTCTaGGGAGCTGCTATCTGGCAGGAAGCAGGCTGCAAACACGATGAT | + |
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Preference number: 1 (lower is better) Translates to: ADDVQEEILHDVVIV*GAAIWQEAGCKHDD Trigger: ATCATCGTGTTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTATCACTACATCATGGAGAATCTCTTCCTGTACGTCATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CCA 90 bp | TTTATAACTGCACAATTTGCTGGTGGGCGGTGGACACTGTTGCTCTaGGTCACTTGCCAAATGGATCCTGGGTGTCTCAGTAAAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: FITAQFAGGRWTLLL*VTCQMDPGCLSKEM Trigger: CATTTCTTTACTGAGACACCCAGGATCCATTTGGCAAGTGACCCAGAGCAACAGTGTCCACCGCCCACCAGCAAATTGTGCAGTTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | AGCCCAGACTGTGAAAGGGTCAAGAACCTGCTCCATTCCGAGATGTaGTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAA | + |
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Preference number: 1 (lower is better) Translates to: SPDCERVKNLLHSEM*SYRLLQNKTVKWTQ Trigger: TTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | AAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATaGCACCACTGCGCAGTGCTAAGATTTCTTAACATAGAGATACTC | + |
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Preference number: 1 (lower is better) Translates to: KSPCLLFLSAEIKGI*HHCAVLRFLNIEIL Trigger: GAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR GCA 90 bp | TGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATGCCACCACTaGGCAGTGCTAAGATTTCTTAACATAGAGATACTCAAGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: CLLFLSAEIKGICHH*AVLRFLNIEILKSL Trigger: TAAAGACTTGAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACAACCCTGCCTGGGGTaGCAGGGAGAGGGGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: DGAGGPHWSSWAWRQDLRQPCLG*QGEGTV Trigger: CACTGTCCCCTCTCCCTGCCACCCCAGGCAGGGTTG...TCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGATTCCAAAGGGGCGGTGAGCATGCCATGGCAGCAAGGAGGTGGATGGAGCACCACCAGCCCAGCCTaGGGGGTCACACACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GDSKGAVSMPWQQGGGWSTTSPA*GVTHLP Trigger: TGGCAGGTGTGTGACCCCCCAGGCTGGGCTGGTGGT...GCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACAGCAAGGAGGTGGATaGAGCAGGTGGCCCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: DGAGGPHWSSWAWRQDLRQQGGG*SRWPPL Trigger: CAGTGGGGGCCACCTGCTCCATCCACCTCCTTGCTG...TCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | CGATGCTCTTGCTCCCCTATGATGACAGTTCGCCACAGACGACCGTaGGCCGCACTGCCGTCTTCCGCAGAGCCGTCCCCAAACAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RCSCSPMMTVRHRRP*AALPSSAEPSPNRS Trigger: GGACCTGTTTGGGGACGGCTCTGCGGAAGACGGCAGTGCGGCCAACGGTCGTCTGTGGCGAACTGTCATCATAGGGGAGCAAGAGCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACTCACCTCATAGGCCTTaGCTGTCACCAGCAGCCGCC | + |
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Preference number: 2 (lower is better) Translates to: MEQVAPTGVPGLGGRTLDSPHRP*LSPAAA Trigger: GGCGGCTGCTGGTGACAGCCAAGGCCTATGAGGTGA...GTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGAGGGGCTGTCTGTGGACCTGGCCCCAGGCACCATCTTGGTTCTCATCTTGGAAGCTGCTGTCCTaGGGCCATCAGAGGCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: AKRGCLWTWPQAPSWFSSWKLLS*GHQRPR Trigger: TCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCA...AGATGAGAACCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCCCCTCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCCAGCTCTCAGGAGGCTaGGGCAGGAGGATCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTQLSGG*GRRIRS Trigger: ACTCCTGATCCTCCTGCCTCAGCCTCCTGAGAGCTG...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGTGGTCCCAGGTGTGGGCTAGAATATTAAGCCCCTCGGGGTCTCCTGTTGGCCTTATGTGTCCCTaGGGACAGGAGGCTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GWWSQVWARILSPSGSPVGLMCP*GQEAQH Trigger: GTGCTGAGCCTCCTGTCCCCAGGGACACATAAGGCC...AACAGGAGACCCCGAGGGGCTTAATATTCTAGCCCACACCTGGGACCACCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | GGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACCTTaGGGGACAGCAGGGTTGTGTCCATTCATCCATCCATCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPHWSSWAWRQDLRP*GTAGLCPFIHPSIP Trigger: TGGGATGGATGGATGGATGAATGGACACAACCCTGCTGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCAATGGACTCAAGCAGTaGGAGGACCCGGGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVNGLKQ*EDPGAG Trigger: CCCTGCACCCGGGTCCTCTCACTGCTTGAGTCCATT...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTGCCACAGAGAATGGACTCAAGCAGTaGGAGGACCCGGGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TKSTALLYSLGSPPGATENGLKQ*EDPGAG Trigger: CCCTGCACCCGGGTCCTCTCACTGCTTGAGTCCATT...CTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGAGGGGCTGTCTGTGGACCTGGCCCCAGGCACCATCTTGGTTCTCATCTGGCAGACATGTGCTTTaGGCCCAGCTTGGAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: AKRGCLWTWPQAPSWFSSGRHVL*AQLGDQ Trigger: CTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGCC...AGATGAGAACCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCCCCTCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACCCAACACAGTGCGAATaGACCAGGAGGGGTGGACGA | + |
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Preference number: 2 (lower is better) Translates to: SNRGWHCPHPPLASTSPDPTQCE*TRRGGR Trigger: TCGTCCACCCCTCCTGGTTCATTCGCACTGTGTTGG...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTGTGCAGGGGACATGGTaGAGCCAGGCATCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSVQGTW*SQASSG Trigger: GCCTGAGGATGCCTGGCTCCACCATGTCCCCTGCAC...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | CACCTTCATGTAGGGCCGGATCATATGCAGGTCGATGCGATGCTCTaGCTCCCCTATGATGACAGTTCGCCACAGACGACCGTTGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: HLHVGPDHMQVDAML*LPYDDSSPQTTVGR Trigger: GCGGCCAACGGTCGTCTGTGGCGAACTGTCATCATAGGGGAGCAAGAGCATCGCATCGACCTGCATATGATCCGGCCCTACATGAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGATTCCAAAGGGGCGGTGAGCATGCCATGGCAGCAAGGAGGTGGATGGAGCTGCAGGTCGATGCGATaGTCTTGCTCCCCTATGATG | + |
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Preference number: 2 (lower is better) Translates to: GDSKGAVSMPWQQGGGWSCRSMR*SCSPMM Trigger: CATCATAGGGGAGCAAGAGCATCGCATCGACCTGCA...GCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCCAGAGAAGGGCATCTTaGGGATGCCAAGGCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTQRRAS*GCQGLE Trigger: TTCCAGGCCTTGGCATCCCCAAGATGCCCTTCTCTG...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGTGGTCCCAGGTGTGGGCTAGAATATTAAGCCCCTCGGGGTCTCCTGTTCTGATTCTCTCTAGGTaGAAGCTGCTGTCCTGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: GWWSQVWARILSPSGSPVLILSR*KLLSCG Trigger: GCCGCAGGACAGCAGCTTCCACCTAGAGAGAATCAG...AACAGGAGACCCCGAGGGGCTTAATATTCTAGCCCACACCTGGGACCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTGCCACAGAGTTTGGCGGTGGCCACTaGGGTGTCATCTTCCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TKSTALLYSLGSPPGATEFGGGH*GVIFPL Trigger: GAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAA...CTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | TGGCCGTGTGCTCTCCCTCTTGGCTCGGAGTCTCTGCTCTTCATATaGCAGGACACAGTCTGGCAGCTGCACGTGTTCCATGGGAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: WPCALPLGSESLLFI*QDTVWQLHVFHGNQ Trigger: CTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACACGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTGCCACAGAGCATGTGCAATGGGCTTaGAGGCCCCCAAAGACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TKSTALLYSLGSPPGATEHVQWA*RPPKTV Trigger: GACTGTCTTTGGGGGCCTTCAAGCCCATTGCACATG...CTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGGTGAGAGGACCCGGGTaGAGGGGACATGGTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRVRGPG*RGHGGA Trigger: GGCTCCACCATGTCCCCTGCACCCGGGTCCTCTCAC...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTGCCACAGAGTCTCGGGCAGACATGTaGTTTGAGCCCAGCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TKSTALLYSLGSPPGATESRADM*FEPSLE Trigger: CTCCAAGCTGGGCTCAAAGCACATGTCTGCCCGAGA...CTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATAGGCCCTGGTGGGTTCTaGTTGCCTGTATCAGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EAEKQETCQRGHLTVGWIGPGGF*LPVSVG Trigger: ACCCACTGATACAGGCAAGCAGAACCCACCAGGGCC...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGTGGTCCCAGGTGTGGGCTAGAATATTAAGCCCCTCGGGGTCTCCTGTTTGGCAGGAAGCAGGCTaGAAACACGATGATGGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: GWWSQVWARILSPSGSPVWQEAG*KHDDGV Trigger: AACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCA...AACAGGAGACCCCGAGGGGCTTAATATTCTAGCCCACACCTGGGACCACCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCAGGCTGAGTCTGGTCTaGGCAGAGGATAGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTRLSLV*AEDRKV Trigger: CACTTTCCTATCCTCTGCCCAGACCAGACTCAGCCT...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATAGGTCTTCAGTGGCCCTaGTGGGTTCTGCTTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: EAEKQETCQRGHLTVGWIGLQWP*WVLLAC Trigger: ACAGGCAAGCAGAACCCACCAGGGCCACTGAAGACC...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCGTGTGCTCTCCCTCTTaGCTCGGAGTCTCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVVCSPS*LGVSAL Trigger: AAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACAC...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | TCCTGGGCTTGGAGGCAGGACCTTAGACCTTTGGGGACAGCAGGGTaGTGTCCATTCATCCATCCATCCATCCCAGACACAGAGATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SWAWRQDLRPLGTAG*CPFIHPSIPDTEIL Trigger: GAGGATCTCTGTGTCTGGGATGGATGGATGGATGAATGGACACAACCCTGCTGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCCACAAGCCCAGACTGTaGAAGGGTCAAGAACCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVHKPRL*KGQEPA Trigger: AGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTG...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGATTCCAAAGGGGCGGTGAGCATGCCATGGCAGCAAGGAGGTGGATGGAGCCCTGCCTCCTATTCCTaGGTGCTGAAATTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GDSKGAVSMPWQQGGGWSPASYS*VLKLKA Trigger: TGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGG...GCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTAGTATCCTCCATGGGTaGCCACCTTCATGTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSSILHG*PPSCRA Trigger: GGCCCTACATGAAGGTGGTCACCCATGGAGGATACT...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACCTCTGCTCTTCATATTaGAGGACACAGTCTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNRGWHCPHPPLASTSPDLCSSY*RTQSGS Trigger: GCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAG...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTCAGAGAAGGGCATCTTaGGGATGCCAAGGCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSQRRAS*GCQGLE Trigger: TTCCAGGCCTTGGCATCCCCAAGATGCCCTTCTCTG...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGATAGAACCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTTCTCGGGCAGACATGTaGTTTGAGCCCAGCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VDRTYLWGRGTELSLSVCSRADM*FEPSLE Trigger: CTCCAAGCTGGGCTCAAAGCACATGTCTGCCCGAGA...ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAAGCACTGCTTTGCTCTACTCTCTCGGGTCCCCTCCCGGTGCCACAGAGTCATATGCAGGTCGATaGGATGCTCTTGCTCCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: TKSTALLYSLGSPPGATESYAGR*DALAPL Trigger: TAGGGGAGCAAGAGCATCGCATCGACCTGCATATGA...CTCTGTGGCACCGGGAGGGGACCCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGATAGAACCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTAAGAGTAACCGTGGGTaGCACTGCCCACATCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: VDRTYLWGRGTELSLSVCKSNRG*HCPHPP Trigger: AGGTGGATGTGGGCAGTGCCACCCACGGTTACTCTT...ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCCTGTGTTATCCTAGCTaGGACAGAGAAGGGCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTLCYPS*DREGHL Trigger: AAGATGCCCTTCTCTGTCCCAGCTAGGATAACACAG...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATAAGGCTGAGTCTGGTCTaGGCAGAGGATAGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: EAEKQETCQRGHLTVGWIRLSLV*AEDRKV Trigger: CACTTTCCTATCCTCTGCCCAGACCAGACTCAGCCT...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | AAAATGCATATCTGTGTTATCCTAGCTGGGACAGAGAAGGGCATCTaGGGGATGCCAAGGCCTGGAAGAGTAACCGTGGGTGGCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KMHICVILAGTEKGI*GMPRPGRVTVGGTA Trigger: GGCAGTGCCACCCACGGTTACTCTTCCAGGCCTTGGCATCCCCAAGATGCCCTTCTCTGTCCCAGCTAGGATAACACAGATATGCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTAGGAGGGGTGGACGATaGTCAGGGACTTTAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSRRGGR*SGTLDS Trigger: AGAATCTAAAGTCCCTGATCATCGTCCACCCCTCCT...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGAGAAGCAGATGCAGCTaGAGCCAGGGCCACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRRSRCS*SQGHQT Trigger: TGTCTGGTGGCCCTGGCTGCAGCTGCATCTGCTTCT...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGAGGGGCTGTCTGTGGACCTGGCCCCAGGCACCATCTTGGTTCTCATCTCAAAACAAAAAGCACTaGTTTGCTCTACTCTCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: AKRGCLWTWPQAPSWFSSQNKKH*FALLSR Trigger: CCGAGAGAGTAGAGCAAAGCAGTGCTTTTTGTTTTG...AGATGAGAACCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCCCCTCTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCTGGAAGAGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCCCCACTCAAGTTCATTaGCATTTCCCAAGAACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KAWKSNRGWHCPHPPLASPTQVH*HFPRTP Trigger: TGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGG...GGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACTCTTCCAGGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGATAGAACCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTGCTTTTCTTCTGACCTaGGAAGGAGGAACTCCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VDRTYLWGRGTELSLSVCAFLLT*EGGTPA Trigger: AGCCGGAGTTCCTCCTTCCCAGGTCAGAAGAAAAGC...ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACAGTGAGAGGACCCGGGTaGAGGGGACATGGTGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTVRGPG*RGHGGA Trigger: GGCTCCACCATGTCCCCTGCACCCGGGTCCTCTCAC...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGTCTCTAGGTGGAAGCTaGTGTCCTGCGGCCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRSLGGS*CPAAIR Trigger: TCTGATGGCCGCAGGACAGCAGCTTCCACCTAGAGA...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCCAAAGGGTCTCTCATTaGGTCAGCCCAAAATGCATA | + |
|
Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVQRVSH*VSPKCI Trigger: TATGCATTTTGGGCTGACCCAATGAGAGACCCTTTG...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATAGGCTGTCTGTGGACCTaGCCCCAGGCACCATCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NSQKSPCLLFLSAEIKGIGCLWT*PQAPSW Trigger: CCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCC...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| 3UTR CAA 90 bp | TTTTTGGCGGTGGCCACTGGGGTGTCATCTTCCCACTCAAGTTCATaGCCATTTCCCAAGAACTCCAGAGAGTCAGTTTCATCTGGCGTC | + |
|
Preference number: 2 (lower is better) Translates to: FLAVATGVSSSHSSS*PFPKNSRESVSSGV Trigger: GACGCCAGATGAAACTGACTCTCTGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACACAGCAGTCACAACCCTaGCTGGGGTGGCAGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTQQSQP*LGWQGE Trigger: CTCTCCCTGCCACCCCAGGCAGGGTTGTGACTGCTG...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGACACAGTCTGGCAGCTaGACGTGTTCCATGGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRTQSGS*TCSMGI Trigger: GATTCCCATGGAACACGTGCAGCTGCCAGACTGTGT...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGATAGAACCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTGTGTTATCCTAGCTaGGACAGAGAAGGGCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VDRTYLWGRGTELSLSVCLCYPS*DREGHL Trigger: AAGATGCCCTTCTCTGTCCCAGCTAGGATAACACAG...ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATACAAAGGGTCTCTCATTaGGTCAGCCCAAAATGCATA | + |
|
Preference number: 2 (lower is better) Translates to: EAEKQETCQRGHLTVGWIQRVSH*VSPKCI Trigger: TATGCATTTTGGGCTGACCCAATGAGAGACCCTTTG...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCCAGAGGATAGGAAAGTaGATACAACTTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVQRIGK*IQLLPL Trigger: CAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTG...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTCAAGTCTTTAGGGAACCACAGGGAGACTCCTCCCTGCAAATGTCATCTGGCTGCACGTGTTCCATaGGAATCAGTCGCTCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ILKSLGNHRETPPCKCHLAARVP*ESVAPA Trigger: AGCTGGAGCGACTGATTCCCATGGAACACGTGCAGC...CAGATGACATTTGCAGGGAGGAGTCTCCCTGTGGTTCCCTAAAGACTTGAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATAATTCCAAAGGGGCGGTaGGCATGCCATGGCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: NSQKSPCLLFLSAEIKGIIPKGR*ACHGSK Trigger: CTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAAT...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATAAGAAGCAGATGCAGCTaGAGCCAGGGCCACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: NSQKSPCLLFLSAEIKGIRSRCS*SQGHQT Trigger: TGTCTGGTGGCCCTGGCTGCAGCTGCATCTGCTTCT...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGTCACAGAAATCCCCCTaGCTCCTATTCCTGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRSQKSP*LLFLSA Trigger: AGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGA...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCAGTACATGTGCAATGGGCTTGAAGGCCCCCAAAGACAGTCAAATGGCAGATTGTGGTGTGTTTCCTaGAGAGCTCAGATCCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: DQYMCNGLEGPQRQSNGRLWCVS*RAQIHG Trigger: CCCATGGATCTGAGCTCTGCAGGAAACACACCACAA...TCTGCCATTTGACTGTCTTTGGGGGCCTTCAAGCCCATTGCACATGTACTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGGTGCAGGGGACATGGTaGAGCCAGGCATCCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVVQGTW*SQASSG Trigger: GCCTGAGGATGCCTGGCTCCACCATGTCCCCTGCAC...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | AACATCTGGAGTCACATCTACTTTAAAGGAGCTCAAAATGTTGGGTTTGTTGACCAACCCTGCCTGGGGTaGCAGGGAGAGGGGACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NIWSHIYFKGAQNVGFVDQPCLG*QGEGTV Trigger: CACTGTCCCCTCTCCCTGCCACCCCAGGCAGGGTTG...GTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATGCCACCACTGCGCAGTGGACATGCTAGTTTCCTaGTCCTCTGTTGCCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CLLFLSAEIKGICHHCAVDMLVS*SSVASA Trigger: AGCAGAGGCAACAGAGGACCAGGAAACTAGCATGTC...CACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGTGCTGAAATTAAAGGCATATGCCACCACTGCGCAGTGCTAAGATTTCTTGTCCTCTGTTGCCTCTaGTGCCCTGTCCTCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSAEIKGICHHCAVLRFLVLCCL*CPVLFF Trigger: GAAGAAGAGGACAGGGCAGCAGAGGCAACAGAGGAC...AAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACAGCTTTGAGCCCAGCTTaGAGATCAGGTGGTCGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTALSPA*RSGGRS Trigger: GCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGC...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGGGCCTTATGTGTCCCTaGGGACAGGAGGCTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVGLMCP*GQEAQH Trigger: GTGCTGAGCCTCCTGTCCCCAGGGACACATAAGGCC...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTCAAGTCTTTAGGGAACCACAGGGAGACTCCTCCCTGCAAATGTCATCTGCCCCAGGCACCATCTTaGTTCTCATCTTCTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: ILKSLGNHRETPPCKCHLPQAPS*FSSSDA Trigger: AGCATCAGAAGATGAGAACCAAGATGGTGCCTGGGG...CAGATGACATTTGCAGGGAGGAGTCTCCCTGTGGTTCCCTAAAGACTTGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGTCTTCAGCCAACCAATaGCAGGCATCCTCCTCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVSSANQ*QASSSG Trigger: CCCGGAGGAGGATGCCTGGCATTGGTTGGCTGAAGA...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCGTGTCAGTTAACATCTaGAGTCACATCTACTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVVSVNI*SHIYFK Trigger: TTTAAAGTAGATGTGACTCCAGATGTTAACTGACAC...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGCACCAGGCATGTTTTTaGCGGTGGCCACTGGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVHQACF*RWPLGC Trigger: ACACCCCAGTGGCCACCGCCAAAAACATGCCTGGTG...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CAA 90 bp | TCTGGAGTCACATCTACTTTAAAGGAGCTCAAAATGTTGGGTTTGTaGACCACCAGGCTGATCAGTACATGTGCAATGGGCTTGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SGVTSTLKELKMLGL*TTRLISTCAMGLKA Trigger: GGCCTTCAAGCCCATTGCACATGTACTGATCAGCCTGGTGGTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | GACACCAAATGTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTGGGCAGATACAACTTCTTCCCTTaGAATGAGGTGTCAGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: DTKCLLLDDTEAESGLGRYNFFP*NEVSVN Trigger: GTTAACTGACACCTCATTCCAAGGGAAGAAGTTGTA...TCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGACATTTGGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGTGCTGAAATTAAAGGCATATGCCACCACTGCGCAGTGCTAAGATTTCTTATGAACCAGGAGGGGTaGACGATGATCAGGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSAEIKGICHHCAVLRFLMNQEG*TMIRDF Trigger: AAAGTCCCTGATCATCGTCCACCCCTCCTGGTTCAT...AAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACTCAAGTCTTTAGGGAACCACAGGGAGACTCCTCCCTGCAAATGTCATCTGTCCATGTCTAGGTTCTaGGTAGATCAGGACATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: ILKSLGNHRETPPCKCHLSMSRF*VDQDML Trigger: TAGCATGTCCTGATCTACCCAGAACCTAGACATGGA...CAGATGACATTTGCAGGGAGGAGTCTCCCTGTGGTTCCCTAAAGACTTGAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATCTGGAGTCACATCTACTTTAAAGGAGCTCAAAATGTTGGGTTTGTTGACCACAAGCCCAGACTGTaGAAGGGTCAAGAACCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NIWSHIYFKGAQNVGFVDHKPRL*KGQEPA Trigger: AGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTG...GTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACACCTGCCTCCTATTCCTaGGTGCTGAAATTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTPASYS*VLKLKA Trigger: TGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGG...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACCTGCTCCATTCCGAGATGTGCTCATACCGCCTTCTTCAAAATAAAACAAGGCTGTGCACGTACTaGATTTTACTGATGAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: KNLLHSEMCSYRLLQNKTRLCTY*ILLMNL Trigger: CAAGTTCATCAGTAAAATTCAGTACGTGCACAGCCT...TGTTTTATTTTGAAGAAGGCGGTATGAGCACATCTCGGAATGGAGCAGGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGTGCTGAAATTAAAGGCATATGCCACCACTGCGCAGTGCTAAGATTTCTTTACAACTTCTTCCCTTaGAATGAGGTGTCAGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSAEIKGICHHCAVLRFLYNFFP*NEVSVN Trigger: GTTAACTGACACCTCATTCCAAGGGAAGAAGTTGTA...AAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACCTGCTCCATTCCGAGATGTGCTCATACCGCCTTCTTCAAAATAAAACACAGAGGATAGGAAAGTaGATACAACTTCTTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KNLLHSEMCSYRLLQNKTQRIGK*IQLLPL Trigger: CAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTG...TGTTTTATTTTGAAGAAGGCGGTATGAGCACATCTCGGAATGGAGCAGGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GCAGGGGACATGGTGGAGCCAGGCATCCTCAGGCGGTaGAGGCTCGATGAAGGCGGGGCTCCCAGGGCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: AGDMVEPGILRR*RLDEGGAPRAS Trigger: CGAAGCCCTGGGAGCCCCGCCTTCATCGAGCCTCCACCGCCTGAGGATGCCTGGCTCCACCATGTCCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GACTCAAGCAGTGAGAGGACCCGGGTGCAGGGGACATaGTGGAGCCAGGCATCCTCAGGCGGTGGAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: DSSSERTRVQGT*WSQASSGGGGS Trigger: CGAGCCTCCACCGCCTGAGGATGCCTGGCTCCACCATGTCCCCTGCACCCGGGTCCTCTCACTGCTTGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GGGGCGGTGAGCATGCCATGGCAGCAAGGAGGTGGATaGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GAVSMPWQQGGG*SRWPPLEFLGL Trigger: CAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | TCAAGCAGTGAGAGGACCCGGGTGCAGGGGACATGGTaGAGCCAGGCATCCTCAGGCGGTGGAGGCTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSSERTRVQGTW*SQASSGGGGSM Trigger: CATCGAGCCTCCACCGCCTGAGGATGCCTGGCTCCACCATGTCCCCTGCACCCGGGTCCTCTCACTGCTTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | ACCTGGGAAGGAGGAACTCCGGCTGCGGTGGCCGTGTaGTCTCCCTCTTGGCTCGGAGTCTCTGCTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TWEGGTPAAVAV*SPSWLGVSALH Trigger: ATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACACGGCCACCGCAGCCGGAGTTCCTCCTTCCCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GAGGTGGATGGAGCAGGTGGCCCCCACTGGAGTTCCTaGGCTTGGAGGCAGGACCTTAGACCTTTGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: EVDGAGGPHWSS*AWRQDLRPLGT Trigger: TGTCCCCAAAGGTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATCCACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GGCCACCAGACATCTGAGGCTCCAGCTAGGGACAGGTaGCAACCGAGCAAAGGGTCTCTCATTGGGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHQTSEAPARDR*QPSKGSLIGSA Trigger: GGCTGACCCAATGAGAGACCCTTTGCTCGGTTGCCACCTGTCCCTAGCTGGAGCCTCAGATGTCTGGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | GATGCCAAGGCCTGGAAGAGTAACCGTGGGTGGCACTaGCCACATCCACCTTTGGCATCCACAAGCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DAKAWKSNRGWH*PHPPLASTSPD Trigger: GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACTCTTCCAGGCCTTGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | GGTGGCCGTGTGCTCTCCCTCTTGGCTCGGAGTCTCTaGTCTTCATATTGCAGGACACAGTCTGGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GGRVLSLLARSL*SSYCRTQSGSC Trigger: GCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACACGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | TGGGACAGAGAAGGGCATCTTGGGGATGCCAAGGCCTaGAAGAGTAACCGTGGGTGGCACTGCCCACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: WDREGHLGDAKA*KSNRGWHCPHP Trigger: TGGATGTGGGCAGTGCCACCCACGGTTACTCTTCCAGGCCTTGGCATCCCCAAGATGCCCTTCTCTGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | AGTCATCTCGGGCAGACATGTGCTTTGAGCCCAGCTTaGAGATCAGGTGGTCGCAGCATCCCACCCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHLGQTCALSPA*RSGGRSIPPTR Trigger: CCTGGTGGGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGCCCGAGATGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | CTGTGTCTTGCCTCACTGTCCCCCAGGTACCTGGGGTaGTGGTCCCAGGTGTGGGCTAGAATATTAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LCLASLSPRYLG*WSQVWARILSP Trigger: GGGGCTTAATATTCTAGCCCACACCTGGGACCACCACCCCAGGTACCTGGGGGACAGTGAGGCAAGACACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGCTTTGAGCCCAGCTaGGAGATCAGGTGGTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SNRGWHCPHPPLASTSPDCFEPS*EIRWSQ Trigger: CTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCA...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGTGAATTTCCTGGTCCTCTGTaGCCTCTGCTGCCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGWHCPHPPLASTSPDCEFPGPL*PLLPCP Trigger: AGGACAGGGCAGCAGAGGCAACAGAGGACCAGGAAA...TTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACGGGCAGACATGTGCTTaGAGCCCAGCTTGGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SNRGWHCPHPPLASTSPDGQTCA*SPAWRS Trigger: TGATCTCCAAGCTGGGCTCAAAGCACATGTCTGCCC...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGAGTAGCCCTTGCTATCTaGGAACTCACAGAAATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DGAGGPHWSSWAWRQDLRVALAI*ELTEIP Trigger: GGGGATTTCTGTGAGTTCCAAGATAGCAAGGGCTAC...TCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR TCA 72 bp | CTGTATCAGTGGGTGCTGGTGATTCCAAAGGGGCGGTaGGCATGCCATGGCAGCAAGGAGGTGGATGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYQWVLVIPKGR*ACHGSKEVDGA Trigger: TGCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACCAGCACCCACTGATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR TCA 72 bp | TGGTGGGTTCTGCTTGCCTGTATCAGTGGGTGCTGGTaGTTCCAAAGGGGCGGTGAGCATGCCATGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WWVLLACISGCW*FQRGGEHAMAA Trigger: TGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACCAGCACCCACTGATACAGGCAAGCAGAACCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GGAACCACAGGGAGACTCCTCCCTGCAAATGTCATCTaGCCTTATGTGTCCCTGGGGACAGGAGGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GTTGRLLPANVI*PYVSLGTGGSA Trigger: TGCTGAGCCTCCTGTCCCCAGGGACACATAAGGCCAGATGACATTTGCAGGGAGGAGTCTCCCTGTGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGTGAAACATGTGCAATGGGCTaGAAGGCCCCCAAAGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGWHCPHPPLASTSPDCETCAMG*KAPKDS Trigger: ACTGTCTTTGGGGGCCTTCAAGCCCATTGCACATGT...TTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAGAGGGGCTGTCTGTGGACCTGGCCCCAGGCACCATCTTGGTTCTCATCTGTAGCCCTTGCTATCTaGGAACTCACAGAAATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AKRGCLWTWPQAPSWFSSVALAI*ELTEIP Trigger: GGGGATTTCTGTGAGTTCCAAGATAGCAAGGGCTAC...AGATGAGAACCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCCCCTCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATACCTGGTGGGTTCTGCTaGCCTGTATCAGTGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EAEKQETCQRGHLTVGWIPGGFC*PVSVGA Trigger: AGCACCCACTGATACAGGCAAGCAGAACCCACCAGG...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTaGTCGCAGCATCCCACCCACCAGGATATACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ADMCFEPSLEIR*SQHPTHQDILS Trigger: GGACAGTATATCCTGGTGGGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GGGACACCTCACAGTGGGGTGGATAGAACCTACCTTTaGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTPHSGVDRTYL*GRGTELSLSVC Trigger: ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCACCCCACTGTGAGGTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | ATTGCAGGACACAGTCTGGCAGCTGCACGTGTTCCATaGGAATCAGTCGCTCCAGCTCTTCCAGGCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IAGHSLAAARVP*ESVAPALPGCA Trigger: TGCACAGCCTGGAAGAGCTGGAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | ATAGTCTGGGGAGCTGCTATCTGGCAGGAAGCAGGCTaGAAACACGATGATGGCGTTGAGACCTTCCCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: IVWGAAIWQEAG*KHDDGVETFPV Trigger: TACGGGGAAGGTCTCAACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | CTCTCCCTCTTGGCTCGGAGTCTCTGCTCTTCATATTaGAGGACACAGTCTGGCAGCTGCACGTGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSLLARSLCSSY*RTQSGSCTCSM Trigger: CATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | CTGGATAAAGACAACTTACAAACCACCAGCCCAGCCTaGGGGGTCACACACCTGCCATCTCAGCTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDKDNLQTTSPA*GVTHLPSQLSG Trigger: TCCTGAGAGCTGAGATGGCAGGTGTGTGACCCCCCAGGCTGGGCTGGTGGTTTGTAAGTTGTCTTTATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GCACAATTTGCTGGTGGGCGGTGGACACTGTTGCTCTaGGTCACTTGCCAAATGGATCCTGGGTGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AQFAGGRWTLLL*VTCQMDPGCLS Trigger: ACTGAGACACCCAGGATCCATTTGGCAAGTGACCCAGAGCAACAGTGTCCACCGCCCACCAGCAAATTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | ACAGGTCCGCACTGTCACCAGGCATGTTTTTGGCGGTaGCCACTGGGGTGTCATCTTCCCACTCAAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGPHCHQACFWR*PLGCHLPTQVH Trigger: ATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAAAACATGCCTGGTGACAGTGCGGACCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR TCA 72 bp | CCCACATCCACCTTTGGCATCCACAAGCCCAGACTGTaGAAGGGTCAAGAACCTGCTCCATTCCGAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: PTSTFGIHKPRL*KGQEPAPFRDV Trigger: CACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR TCA 72 bp | GGTGTCTCAGTAAAGAAATGGAACAGCCCTTCCCCATaGGGCTGCTGGACCTCTGTGTCTTGCCTCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GVSVKKWNSPSP*GCWTSVSCLTV Trigger: GACAGTGAGGCAAGACACAGAGGTCCAGCAGCCTCATGGGGAAGGGCTGTTCCATTTCTTTACTGAGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | GACACTCTGATTCTCTCTAGGTGGAAGCTGCTGTCCTaGGGCCATCAGAGGCCGAGAAGCAAGAAACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTLILSRWKLLS*GHQRPRSKKHV Trigger: GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCTAGAGAGAATCAGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | GCTGGTGGGCGGTGGACACTGTTGCTCTGGGTCACTTaGCAAATGGATCCTGGGTGTCTCAGTAAAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: AGGRWTLLLWVT*QMDPGCLSKEM Trigger: CATTTCTTTACTGAGACACCCAGGATCCATTTGGCAAGTGACCCAGAGCAACAGTGTCCACCGCCCACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | TGTCCCCACCGTCTCTGTGTTTATAACTGCACAATTTaGTGGTGGGCGGTGGACACTGTTGCTCTGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CPHRLCVYNCTI*WWAVDTVALGH Trigger: GTGACCCAGAGCAACAGTGTCCACCGCCCACCAGCAAATTGTGCAGTTATAAACACAGAGACGGTGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | CTCTGCTCTTCATATTGCAGGACACAGTCTGGCAGCTaGACGTGTTCCATGGGAATCAGTCGCTCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCSSYCRTQSGS*TCSMGISRSSS Trigger: AGAGCTGGAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | TCAGGACATGCTAGTTTCCTGGTCCTCTGTTGCCTCTaGTGCCCTGTCCTCTTCTTCCACAGTCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGHASFLVLCCL*CPVLFFHSLWL Trigger: AAGCCAGAGACTGTGGAAGAAGAGGACAGGGCAGCAGAGGCAACAGAGGACCAGGAAACTAGCATGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | GGTAGATCAGGACATGCTAGTTTCCTGGTCCTCTGTTaGCTCTGCTGCCCTGTCCTCTTCTTCCACAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRSGHASFLVLC*LCCPVLFFHSL Trigger: GAGACTGTGGAAGAAGAGGACAGGGCAGCAGAGGCAACAGAGGACCAGGAAACTAGCATGTCCTGATCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | CCCCACCGTCTCTGTGTTTATAACTGCACAATTTGCTaGTGGGCGGTGGACACTGTTGCTCTGGGTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: PHRLCVYNCTIC*WAVDTVALGHL Trigger: CAAGTGACCCAGAGCAACAGTGTCCACCGCCCACCAGCAAATTGTGCAGTTATAAACACAGAGACGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | TCGGAGTCTCTGCTCTTCATATTGCAGGACACAGTCTaGCAGCTGCACGTGTTCCATGGGAATCAGTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SESLLFILQDTV*QLHVFHGNQSL Trigger: GAGCGACTGATTCCCATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | CATCCACAAGCCCAGACTGTGAAAGGGTCAAGAACCTaGTCCATTCCGAGATGTGCTCATACCGCCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HPQAQTVKGSRT*SIPRCAHTAFF Trigger: GAAGAAGGCGGTATGAGCACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GGCGGTGGACACTGTTGCTCTGGGTCACTTGCCAAATaGATCCTGGGTGTCTCAGTAAAGAAATGGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGGHCCSGSLAK*ILGVSVKKWNS Trigger: GCTGTTCCATTTCTTTACTGAGACACCCAGGATCCATTTGGCAAGTGACCCAGAGCAACAGTGTCCACCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | CTCCATGATGTAGTGATAGTCTGGGGAGCTGCTATCTaGCAGGAAGCAGGCTGCAAACACGATGATGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LHDVVIVWGAAI*QEAGCKHDDGV Trigger: AACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTATCACTACATCATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCGAGAAGCAAGAAACATGTCAGAGGGGACACCTCACAGTGGGGTGGATATCCCACTCAAGTTCATaGCCATTTCCCAAGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAEKQETCQRGHLTVGWISHSSS*PFPKNS Trigger: GGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGGA...TATCCACCCCACTGTGAGGTGTCCCCTCTGACATGTTTCTTGCTTCTCGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGACATGTGCAATGGGCTaGAAGGCCCCCAAAGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRTCAMG*KAPKDS Trigger: ACTGTCTTTGGGGGCCTTCAAGCCCATTGCACATGT...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATCACCAGGCATGTTTTaGGCGGTGGCCACTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NSQKSPCLLFLSAEIKGISPGMF*AVATGV Trigger: CACCCCAGTGGCCACCGCCAAAAACATGCCTGGTGA...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | CAAAGACAGTCAAATGGCAGAATAGTGCATGTCAGGTaGAGATGTGAGGTCAGCAGTCACAACCCTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRQSNGRIVHVR*RCEVSSHNPAW Trigger: CCAGGCAGGGTTGTGACTGCTGACCTCACATCTCCACCTGACATGCACTATTCTGCCATTTGACTGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GAGATGGCCAACACAGTGCGAATGAACCAGGAGGGGTaGACGATGATCAGGGACTTTAGATTCTTCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EMANTVRMNQEG*TMIRDFRFFLS Trigger: ACTGAGGAAGAATCTAAAGTCCCTGATCATCGTCCACCCCTCCTGGTTCATTCGCACTGTGTTGGCCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTaGGCAGAGGATAGGAAAGTGGATACAACTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSYLMTQRLSLV*AEDRKVDTTSS Trigger: GGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GTACAGGAAGAGATTCTCCATGATGTAGTGATAGTCTaGGGAGCTGCTATCTGGCAGGAAGCAGGCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VQEEILHDVVIV*GAAIWQEAGCK Trigger: TTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCAGACTATCACTACATCATGGAGAATCTCTTCCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | TGGCCACTGGGGTGTCATCTTCCCACTCAAGTTCATTaGCATTTCCCAAGAACTCCAGAGAGTCAGTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WPLGCHLPTQVH*HFPRTPESQFH Trigger: ATGAAACTGACTCTCTGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACAGGGCAGACATGTGCTTaGAGCCCAGCTTGGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTGQTCA*SPAWRS Trigger: TGATCTCCAAGCTGGGCTCAAAGCACATGTCTGCCC...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR TCA 72 bp | ATCAGTCGCTCCAGCTCTTCCAGGCTGTGCACGTACTaGATTTTACTGATGAACTTGACACTGATGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISRSSSSRLCTY*ILLMNLTLMNG Trigger: GCCATTCATCAGTGTCAAGTTCATCAGTAAAATTCAGTACGTGCACAGCCTGGAAGAGCTGGAGCGACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACAGCAAAGGGTCTCTCATaGGGTCAGCCCAAAATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTAKGLS*GQPKMH Trigger: ATGCATTTTGGGCTGACCCAATGAGAGACCCTTTGC...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | GTACTGAATTTTACTGATGAACTTGACACTGATGAATaGCCGGGAGATGGCCAACACAGTGCGAATGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VLNFTDELDTDE*PGDGQHSANEP Trigger: TGGTTCATTCGCACTGTGTTGGCCATCTCCCGGCCATTCATCAGTGTCAAGTTCATCAGTAAAATTCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATGCCACCACTGCGCAGTGCTAAGATTTCTTAACATAGAGATACTCAAGTCTCTCAAAATGTTGGGTTaGTTGACCACCAGGCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: ICHHCAVLRFLNIEILKSLKMLG*LTTRLI Trigger: GATCAGCCTGGTGGTCAACAAACCCAACATTTTGAG...AGACTTGAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | TGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATaGCACCACTGCGCAGTGCTAAGATTTCTTAACATA | + |
|
Preference number: 3 (lower is better) Translates to: CLLFLSAEIKGI*HHCAVLRFLNI Trigger: TATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR GCA 72 bp | TTCCTGAGTGCTGAAATTAAAGGCATATGCCACCACTaGGCAGTGCTAAGATTTCTTAACATAGAGATACTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSAEIKGICHH*AVLRFLNIEIL Trigger: GAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CCA 72 bp | AACTTCTTCCCTTGGAATGAGGTGTCAGTTAACATCTaGAGTCACATCTACTTTAAAGGAGCTCAAAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: NFFPWNEVSVNI*SHIYFKGAQNV Trigger: AACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGATGTTAACTGACACCTCATTCCAAGGGAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCCGCACTGCCGTCTTCCGCAGAGCCGTCCCCAAACAGGTCCGCACTGTCCAGGGTGGAGGGAGGTaGGGAGGAGTCTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRTAVFRRAVPKQVRTVQGGGR*GGVFHC Trigger: GCAGTGGAAGACTCCTCCTCACCTCCCTCCACCCTG...GACAGTGCGGACCTGTTTGGGGACGGCTCTGCGGAAGACGGCAGTGCGGCCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR CCA 90 bp | GATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGAGAACTCCGGCTGCGGTaGCCGTGTGCTCTCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGAGGPHWSSWAWRQDLRELRLR*PCALPL Trigger: AAGAGGGAGAGCACACGGCCACCGCAGCCGGAGTTC...TCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR TCA 90 bp | CGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGTGAAGGTCCAGGGAGATGTTaGTCTCTGGAGCCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGWHCPHPPLASTSPDCEGPGRC*SLEPPA Trigger: CGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACC...TTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCAGGGCCACCAGACATCTGAGGCTCCAGCTAGGGACAGGTGGCAACCGTGGCAGGAAGCAGGCTaGAAACACGATGATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSQGHQTSEAPARDRWQPWQEAG*KHDDGV Trigger: AACGCCATCATCGTGTTTGCAGCCTGCTTCCTGCCA...CGGTTGCCACCTGTCCCTAGCTGGAGCCTCAGATGTCTGGTGGCCCTGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| 3UTR CAA 72 bp | AGGAACTCCGGCTGCGGTGGCCGTGTGCTCTCCCTCTaGGCTCGGAGTCTCTGCTCTTCATATTGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RNSGCGGRVLSL*ARSLCSSYCRT Trigger: TGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACACGGCCACCGCAGCCGGAGTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGGCCACCAGACATCTGAGGCTCCAGCTAGGGACAGGTGGCAACCGAAGGAGGGGTGGACGATaGTCAGGGACTTTAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AARATRHLRLQLGTGGNRRRGGR*SGTLDS Trigger: AGAATCTAAAGTCCCTGATCATCGTCCACCCCTCCT...TCGGTTGCCACCTGTCCCTAGCTGGAGCCTCAGATGTCTGGTGGCCCTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACCACCAGGCATGTTTTTaGCGGTGGCCACTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNRGWHCPHPPLASTSPDHQACF*RWPLGC Trigger: ACACCCCAGTGGCCACCGCCAAAAACATGCCTGGTG...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | GATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGAGCTTTTCTTCTGACCTaGGAAGGAGGAACTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGAGGPHWSSWAWRQDLRAFLLT*EGGTPA Trigger: AGCCGGAGTTCCTCCTTCCCAGGTCAGAAGAAAAGC...TCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR TCA 90 bp | GGGTGGTGGTCCCAGGTGTGGGCTAGAATATTAAGCCCCTCGGGGTCTCCTGTTAGTATCCTCCATGGGTaGCCACCTTCATGTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWWSQVWARILSPSGSPVSILHG*PPSCRA Trigger: GGCCCTACATGAAGGTGGTCACCCATGGAGGATACT...AACAGGAGACCCCGAGGGGCTTAATATTCTAGCCCACACCTGGGACCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCAGGTGGCCCCCACTGGAGTTCCTGGGCTTGGAGGCAGGACCTTAGACGGAGATGTTGATCTCTaGAGCCACCAGCGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MEQVAPTGVPGLGGRTLDGDVDL*SHQRLS Trigger: AGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCC...GTCTAAGGTCCTGCCTCCAAGCCCAGGAACTCCAGTGGGGGCCACCTGCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCGTGTGCTCTCCCTCTTaGCTCGGAGTCTCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTVCSPS*LGVSAL Trigger: AAGAGCAGAGACTCCGAGCCAAGAGGGAGAGCACAC...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | AGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCACAAGCCCAGACTGCAGGTCGATGCGATaGTCTTGCTCCCCTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SNRGWHCPHPPLASTSPDCRSMR*SCSPMM Trigger: CATCATAGGGGAGCAAGAGCATCGCATCGACCTGCA...GTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCTGGGGAGCTGCTATCTaGCAGGAAGCAGGCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVWGAAI*QEAGCK Trigger: TTTGCAGCCTGCTTCCTGCCAGATAGCAGCTCCCCA...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | GGTGATTCCAAAGGGGCGGTGAGCATGCCATGGCAGCAAGGAGGTGGATGGAGCATGAACCAGGAGGGGTaGACGATGATCAGGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDSKGAVSMPWQQGGGWSMNQEG*TMIRDF Trigger: AAAGTCCCTGATCATCGTCCACCCCTCCTGGTTCAT...GCTCCATCCACCTCCTTGCTGCCATGGCATGCTCACCGCCCCTTTGGAATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | GCAGACATGTGCTTTGAGCCCAGCTTGGAGATCAGGTGGTCGCAGCATCCCACCTTGCAGGACACAGTCTaGCAGCTGCACGTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADMCFEPSLEIRWSQHPTLQDTV*QLHVFH Trigger: ATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAA...GGTGGGATGCTGCGACCACCTGATCTCCAAGCTGGGCTCAAAGCACATGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| 3UTR CAA 72 bp | GTAGGGCCGGATCATATGCAGGTCGATGCGATGCTCTaGCTCCCCTATGATGACAGTTCGCCACAGACGACC | + |
|
Preference number: 4 (lower is better) Translates to: VGPDHMQVDAML*LPYDDSSPQTT Trigger: GGTCGTCTGTGGCGAACTGTCATCATAGGGGAGCAAGAGCATCGCATCGACCTGCATATGATCCGGCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCCTGGAAGAGTAACCGTGGGTGGCACTGCCCACATCCACCTTTGGCATCCCAATGTCGTCCACATTaGTGTCCAGGTCATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAWKSNRGWHCPHPPLASQCRPH*CPGHQV Trigger: CACCTGATGACCTGGACATCAATGTGGACGACATTG...GGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACTCTTCCAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | CCACAAGCCCAGACTGTGAAAGGGTCAAGAACCTGCTCCATTCCGAGATGTGCTTTCCTGGTCCTCTGTTaGCTCTGCTGCCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQAQTVKGSRTCSIPRCAFLVLC*LCCPVL Trigger: GAGGACAGGGCAGCAGAGGCAACAGAGGACCAGGAA...AGCACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | GTGGATAGAACCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCGCTCAAGTTCAGGGTaGAGGGAGGTGAGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDRTYLWGRGTELSLSVCRSSSG*REVRRS Trigger: ACTCCTCCTCACCTCCCTCCACCCTGAACTTGAGCG...ACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGGTTCTATCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTGCTGCACGTGTTCCATaGGAATCAGTCGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSAARVP*ESVAPA Trigger: AGCTGGAGCGACTGATTCCCATGGAACACGTGCAGC...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| 3UTR CAA 72 bp | AAGAGTAACCGTGGGTGGCACTGCCCACATCCACCTTaGGCATCCACAAGCCCAGACTGTGAAAGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSNRGWHCPHPP*ASTSPDCERVK Trigger: CTTGACCCTTTCACAGTCTGGGCTTGTGGATGCCAAAGGTGGATGTGGGCAGTGCCACCCACGGTTACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CAA 72 bp | GCTCTCCCTCTTGGCTCGGAGTCTCTGCTCTTCATATaGCAGGACACAGTCTGGCAGCTGCACGTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPLGSESLLFI*QDTVWQLHVFH Trigger: ATGGAACACGTGCAGCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAAGAGGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAGCCCAGACTGTGAAAGGGTCAAGAACCTGCTCCATTCCGAGATGTGCTGTCCTCTGTTGCCTCTaGTGCCCTGTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQAQTVKGSRTCSIPRCAVLCCL*CPVLFF Trigger: GAAGAAGAGGACAGGGCAGCAGAGGCAACAGAGGAC...AGCACATCTCGGAATGGAGCAGGTTCTTGACCCTTTCACAGTCTGGGCTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | GACACCAAATGTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTGGGCAGACGCTCAAGTTCAGGGTaGAGGGAGGTGAGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKCLLLDDTEAESGLGRRSSSG*REVRRS Trigger: ACTCCTCCTCACCTCCCTCCACCCTGAACTTGAGCG...TCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGACATTTGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CAA 72 bp | TGGAGGCAGGACCTTAGACCTTTGGGGACAGCAGGGTaGTGTCCATTCATCCATCCATCCATCCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: WRQDLRPLGTAG*CPFIHPSIPDT Trigger: TGTGTCTGGGATGGATGGATGGATGAATGGACACAACCCTGCTGTCCCCAAAGGTCTAAGGTCCTGCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCTTTGGGGGAGAGGCACAGAGCTCTCTCTCTCTGTCTGTCTCTCTCTCTGGAGATGTTGATCTCTaGAGCCACCAGCGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTFGGEAQSSLSLSVSLSGDVDL*SHQRLS Trigger: AGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCC...AGAGAGAGAGACAGACAGAGAGAGAGAGCTCTGTGCCTCTCCCCCAAAGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATACAGGGTGGAGGGAGGTaGGGAGGAGTCTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSQKSPCLLFLSAEIKGIQGGGR*GGVFHC Trigger: GCAGTGGAAGACTCCTCCTCACCTCCCTCCACCCTG...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | GACACCAAATGTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTGGGCAGACTCTGGCTTTTCTTCTaGCCTGGGAAGGAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DTKCLLLDDTEAESGLGRLWLFF*PGKEEL Trigger: GAGTTCCTCCTTCCCAGGTCAGAAGAAAAGCCAGAG...TCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGACATTTGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGCTGAAATTAAAGGCATATGCCACCACTGCGCAGTGCTAAGATTTCTTGGTCCAGGGAGATGTTaGTCTCTGGAGCCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSAEIKGICHHCAVLRFLGPGRC*SLEPPA Trigger: CGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACC...AAGAAATCTTAGCACTGCGCAGTGGTGGCATATGCCTTTAATTTCAGCACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGGGAGGAGTCTTCCACTaGGCCACCCAGCCGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVGGVFH*ATQPLH Trigger: GTGGAGCGGCTGGGTGGCGCAGTGGAAGACTCCTCC...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR GCA 90 bp | GACACCAAATGTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTGGGCAGATCATATGCAGGTCGATaGGATGCTCTTGCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DTKCLLLDDTEAESGLGRSYAGR*DALAPL Trigger: TAGGGGAGCAAGAGCATCGCATCGACCTGCATATGA...TCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGACATTTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | AACATCTGGAGTCACATCTACTTTAAAGGAGCTCAAAATGTTGGGTTTGTTGACGGAGGAGTCTTCCACTaGGCCACCCAGCCGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NIWSHIYFKGAQNVGFVDGGVFH*ATQPLH Trigger: GTGGAGCGGCTGGGTGGCGCAGTGGAAGACTCCTCC...GTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGCTCTGCTCTTCATATTaGAGGACACAGTCTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRLCSSY*RTQSGS Trigger: GCTGCCAGACTGTGTCCTGCAATATGAAGAGCAGAG...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | AACTCACAGAAATCCCCCTGCCTCCTATTCCTGAGTGCTGAAATTAAAGGCATATTTGGCGGTGGCCACTaGGGTGTCATCTTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NSQKSPCLLFLSAEIKGIFGGGH*GVIFPL Trigger: GAGTGGGAAGATGACACCCCAGTGGCCACCGCCAAA...TATGCCTTTAATTTCAGCACTCAGGAATAGGAGGCAGGGGGATTTCTGTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| 3UTR CAA 72 bp | CTAGGGACAGGTGGCAACCGAGCAAAGGGTCTCTCATaGGGTCAGCCCAAAATGCATATCTGTGTTATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGTGGNRAKGLS*GQPKMHICVIL Trigger: TAGGATAACACAGATATGCATTTTGGGCTGACCCAATGAGAGACCCTTTGCTCGGTTGCCACCTGTCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CAA 72 bp | TTCTGGACAGGGTCTCACTATGTAGCCCTTGCTATCTaGGAACTCACAGAAATCCCCCTGCCTCCTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWTGSHYVALAI*ELTEIPLPPIP Trigger: AGGAATAGGAGGCAGGGGGATTTCTGTGAGTTCCAAGATAGCAAGGGCTACATAGTGAGACCCTGTCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CAA 72 bp | GTGGCCACTGGGGTGTCATCTTCCCACTCAAGTTCATaGCCATTTCCCAAGAACTCCAGAGAGTCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VATGVSSSHSSS*PFPKNSRESVS Trigger: TGAAACTGACTCTCTGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGGAAGATGACACCCCAGTGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR TCA 90 bp | ATATGCCACCACTGCGCAGTGCTAAGATTTCTTAACATAGAGATACTCAAGTCTCCAACACAGTGCGAATaGACCAGGAGGGGTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: ICHHCAVLRFLNIEILKSPTQCE*TRRGGR Trigger: TCGTCCACCCCTCCTGGTTCATTCGCACTGTGTTGG...AGACTTGAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | GATCAGTACATGTGCAATGGGCTTGAAGGCCCCCAAAGACAGTCAAATGGCAGACCCACTCAAGTTCATTaGCATTTCCCAAGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQYMCNGLEGPQRQSNGRPTQVH*HFPRTP Trigger: TGGAGTTCTTGGGAAATGGCAATGAACTTGAGTGGG...TCTGCCATTTGACTGTCTTTGGGGGCCTTCAAGCCCATTGCACATGTACTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | ATATGCCACCACTGCGCAGTGCTAAGATTTCTTAACATAGAGATACTCAAGTCTTCTTCAGCCAACCAATaGCAGGCATCCTCCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICHHCAVLRFLNIEILKSSSANQ*QASSSG Trigger: CCCGGAGGAGGATGCCTGGCATTGGTTGGCTGAAGA...AGACTTGAGTATCTCTATGTTAAGAAATCTTAGCACTGCGCAGTGGTGGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTGGGCAGAGGATAGGAAAGTGGATACAACTTCTTCCCTTGGAATGAGGAGGCTGTGCACGTACTaGATTTTACTGATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVWAEDRKVDTTSSLGMRRLCTY*ILLMNL Trigger: CAAGTTCATCAGTAAAATTCAGTACGTGCACAGCCT...CCTCATTCCAAGGGAAGAAGTTGTATCCACTTTCCTATCCTCTGCCCAGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGACACAGTCTGGCAGCTaGACGTGTTCCATGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVTQSGS*TCSMGI Trigger: GATTCCCATGGAACACGTGCAGCTGCCAGACTGTGT...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR GCA 90 bp | CCTGGATCTTCATCTTTCTTCTCAGACACCAAATGTCTCCTACTTGATGACACATTGGCTCGGAGTCTCTaGTCTTCATATTGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGSSSFFSDTKCLLLDDTLARSL*SSYCRT Trigger: TGTCCTGCAATATGAAGAGCAGAGACTCCGAGCCAA...TGTGTCATCAAGTAGGAGACATTTGGTGTCTGAGAAGAAAGATGAAGATCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTCATACCGCCTTCTTCAAAATAAAACAGTGAAATGGACTCAAGCAGTGGACATGCTAGTTTCCTaGTCCTCTGTTGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MCSYRLLQNKTVKWTQAVDMLVS*SSVASA Trigger: AGCAGAGGCAACAGAGGACCAGGAAACTAGCATGTC...CACTGCTTGAGTCCATTTCACTGTTTTATTTTGAAGAAGGCGGTATGAGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| 3UTR CAA 72 bp | GTCACATCTACTTTAAAGGAGCTCAAAATGTTGGGTTaGTTGACCACCAGGCTGATCAGTACATGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VTSTLKELKMLG*LTTRLISTCAM Trigger: CATTGCACATGTACTGATCAGCCTGGTGGTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| 3UTR CAA 72 bp | TCTGGAGTCACATCTACTTTAAAGGAGCTCAAAATGTaGGGTTTGTTGACCACCAGGCTGATCAGTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SGVTSTLKELKM*GLLTTRLISTC Trigger: ACATGTACTGATCAGCCTGGTGGTCAACAAACCCAACATTTTGAGCTCCTTTAAAGTAGATGTGACTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGCCGCACTGCCGTCTTCCGCAGAGCCGTCCCCAAACAGGTCCGCACTGTCTGGTCCAGGGAGATGTaGATCTCTGGAGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGRTAVFRRAVPKQVRTVWSREM*ISGATS Trigger: GCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCA...GACAGTGCGGACCTGTTTGGGGACGGCTCTGCGGAAGACGGCAGTGCGGCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS TCA 90 bp | CTTTCTCTTTCGATGTGCTCCGCTCAAGTTCAGGGTGGAGGGAGGTaGGGAGGAGTCTTCCACTGCGCCACCCAGCCGCTCCACCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSMCSAQVQGGGR*GGVFHCATQPLHPG Trigger: ACCGGGGTGGAGCGGCTGGGTGGCGCAGTGGAAGACTCCTCCTCACCTCCCTCCACCCTGAACTTGAGCGGAGCACATCGAAAGAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS CCA 90 bp | CTGCGCCACCCAGCCGCTCCACCCCGGTGTCTTCTGGGAGCGGTCTaGGCAGATCCTCATCCTGCCATTCATCCCTCACGTCCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRHPAAPPRCLLGAV*ADPHPAIHPSRPHF Trigger: AAAATGTGGACGTGAGGGATGAATGGCAGGATGAGGATCTGCCCAGACCGCTCCCAGAAGACACCGGGGTGGAGCGGCTGGGTGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS-3UTR CAA 90 bp | GCCAAGAGGGGCTGTCTGTGGACCTGGCCCCAGGCACCATCTTGGTTCTCATCTTTTCCTGGTCCTCTGTaGCCTCTGCTGCCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKRGCLWTWPQAPSWFSSFPGPL*PLLPCP Trigger: AGGACAGGGCAGCAGAGGCAACAGAGGACCAGGAAA...AGATGAGAACCAAGATGGTGCCTGGGGCCAGGTCCACAGACAGCCCCTCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS CCA 90 bp | CACCCCGGTGTCTTCTGGGAGCGGTCTGCAGAAGCCGCCAAGGACTaGGCAGATCCTCATCCTGCCATTCATCCCTCACGTCCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPGVFWERSAEAAKD*ADPHPAIHPSRPHF Trigger: AAAATGTGGACGTGAGGGATGAATGGCAGGATGAGGATCTGCCCAGTCCTTGGCGGCTTCTGCAGACCGCTCCCAGAAGACACCGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCTCACCAGGCATGTTTTaGGCGGTGGCCACTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVSPGMF*AVATGV Trigger: CACCCCAGTGGCCACCGCCAAAAACATGCCTGGTGA...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS TCA 90 bp | AGTCGTCGGACAGCAGAGAGCCCTCGCTTTGGTCCAGGGAGATGTTaGTCTCTGGAGCCACCAGCGTCTTTCTCTTTCGATGTGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRTAESPRFGPGRC*SLEPPASFSFDVLR Trigger: GCGGAGCACATCGAAAGAGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS CCA 90 bp | TCAGGTGTGTCGAGGAAGTCGTCGGACAGCAGAGAGCCCTCGCTTTaGTCCAGGGAGATGTTGATCTCTGGAGCCACCAGCGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGVSRKSSDSREPSL*SREMLISGATSVFL Trigger: GAGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACTTCCTCGACACACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGAAGCTGCTGTCCTGCGGCCATCAGAGGCCGAGAAGCAAGAAACATGTCTGGTCCAGGGAGATGTaGATCTCTGGAGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RWKLLSCGHQRPRSKKHVWSREM*ISGATS Trigger: GCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCA...GACATGTTTCTTGCTTCTCGGCCTCTGATGGCCGCAGGACAGCAGCTTCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS GCA 90 bp | GGAGCGGTCTGCAGAAGCCGCCAAGGACTGGGCAGATCCTCATCCTaGCATTCATCCCTCACGTCCACATTTTCCATCCTTAGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAVCRSRQGLGRSSS*HSSLTSTFSILSVA Trigger: AGCTACACTAAGGATGGAAAATGTGGACGTGAGGGATGAATGGCAGGATGAGGATCTGCCCAGTCCTTGGCGGCTTCTGCAGACCGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
||
| CDS CCA 90 bp | GGACAGCAGAGAGCCCTCGCTTTGGTCCAGGGAGATGTTGATCTCTaGAGCCACCAGCGTCTTTCTCTTTCGATGTGCTCCGCTCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQQRALALVQGDVDL*SHQRLSLSMCSAQV Trigger: AACTTGAGCGGAGCACATCGAAAGAGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS-3UTR CAA 90 bp | GACACCAAATGTCTCCTACTTGATGACACAGAGGCTGAGTCTGGTCTGGGCAGATCAATGTCGTCCACATaGATGTCCAGGTCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DTKCLLLDDTEAESGLGRSMSST*MSRSSG Trigger: ACCTGATGACCTGGACATCAATGTGGACGACATTGA...TCTGCCCAGACCAGACTCAGCCTCTGTGTCATCAAGTAGGAGACATTTGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS CCA 72 bp | CACTGCGCCACCCAGCCGCTCCACCCCGGTGTCTTCTaGGAGCGGTCTGGGCAGATCCTCATCCTGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: HCATQPLHPGVF*ERSGQILILPF Trigger: GAATGGCAGGATGAGGATCTGCCCAGACCGCTCCCAGAAGACACCGGGGTGGAGCGGCTGGGTGGCGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
||
| CDS TCA 72 bp | TCGATGTGCTCCGCTCAAGTTCAGGGTGGAGGGAGGTaGGGAGGAGTCTTCCACTGCGCCACCCAGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SMCSAQVQGGGR*GGVFHCATQPL Trigger: GAGCGGCTGGGTGGCGCAGTGGAAGACTCCTCCTCACCTCCCTCCACCCTGAACTTGAGCGGAGCACATCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS CCA 72 bp | TCGAGGAAGTCGTCGGACAGCAGAGAGCCCTCGCTTTaGTCCAGGGAGATGTTGATCTCTGGAGCCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRKSSDSREPSL*SREMLISGATS Trigger: GCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACTTCCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
||
| CDS CCA 72 bp | GTCTTCTGGGAGCGGTCTGCAGAAGCCGCCAAGGACTaGGCAGATCCTCATCCTGCCATTCATCCCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: VFWERSAEAAKD*ADPHPAIHPSR Trigger: ACGTGAGGGATGAATGGCAGGATGAGGATCTGCCCAGTCCTTGGCGGCTTCTGCAGACCGCTCCCAGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146030.8 |
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| CDS CAA 72 bp | GTCGAGGAAGTCGTCGGACAGCAGAGAGCCCTCGCTTaGGTCCAGGGAGATGTTGATCTCTGGAGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: VEEVVGQQRALA*VQGDVDLWSHQ Trigger: CTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACTTCCTCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| CDS CAA 90 bp | AAGTCGTCGGACAGCAGAGAGCCCTCGCTTTGGTCCAGGGAGATGTaGATCTCTGGAGCCACCAGCGTCTTTCTCTTTCGATGTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: KSSDSREPSLWSREM*ISGATSVFLFRCAP Trigger: CGGAGCACATCGAAAGAGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| CDS CAA 90 bp | ATCAGGTGTGTCGAGGAAGTCGTCGGACAGCAGAGAGCCCTCGCTTaGGTCCAGGGAGATGTTGATCTCTGGAGCCACCAGCGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: IRCVEEVVGQQRALA*VQGDVDLWSHQRLS Trigger: AGAAAGACGCTGGTGGCTCCAGAGATCAACATCTCCCTGGACCAAAGCGAGGGCTCTCTGCTGTCCGACGACTTCCTCGACACACCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
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| CDS CCA 72 bp | TCTTTCTCTTTCGATGTGCTCCGCTCAAGTTCAGGGTaGAGGGAGGTGAGGAGGAGTCTTCCACTGCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFSFDVLRSSSG*REVRRSLPLRH Trigger: GTGGCGCAGTGGAAGACTCCTCCTCACCTCCCTCCACCCTGAACTTGAGCGGAGCACATCGAAAGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047408.6 ENSMUST00000146030.8 |
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| CDS CAA 72 bp | GAGTCAGTTTCATCTGGCGTCTCAATGTCGTCCACATaGATGTCCAGGTCATCAGGTGTGTCGAGGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: ESVSSGVSMSST*MSRSSGVSRKS Trigger: CGACTTCCTCGACACACCTGATGACCTGGACATCAATGTGGACGACATTGAGACGCCAGATGAAACTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
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| CDS TCA 72 bp | AGTCAGTTTCATCTGGCGTCTCAATGTCGTCCACATTaGTGTCCAGGTCATCAGGTGTGTCGAGGAAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: SQFHLASQCRPH*CPGHQVCRGSR Trigger: ACGACTTCCTCGACACACCTGATGACCTGGACATCAATGTGGACGACATTGAGACGCCAGATGAAACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047408.6 |
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