Pregenerated sensors for ATAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024426Ensembl transcript IDs: ENSMUST00000056034.13, ENSMUST00000061052.12, ENSMUST00000077494.13, ENSMUST00000126744.8, ENSMUST00000137182.8, ENSMUST00000140292.8, ENSMUST00000141132.2, ENSMUST00000141662.8, ENSMUST00000149277.8
Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTACCAGCCCCCAGGGAGTCCCCCTGGTGCGTCTGCGCTGGGCTaGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: GYQPPGSPPGASALG*AASRVSGQQKACSR Trigger: CCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGGGGGACTCCCTGGGGGCTGGTAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR TCA 90 bp | CAGCTCCTGCTCTGGAACAAAGGGCCGAAGGGGACCCCGATCCGGTaGGTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QLLLWNKGPKGTPIR*VAQAARTWRWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR CCA 90 bp | GCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGAGCGAAGCAGCTCCTGCTCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: AASRVSGQQKACSRV*GTETQGAKQLLLWN Trigger: GTTCCAGAGCAGGAGCTGCTTCGCTCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR TCA 90 bp | ATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATaGCCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: MVTKAWCCGVPAGFE*PWRSLCPHPPSRTG Trigger: CCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| 3UTR CCA 90 bp | CTGGCCGACCTATCCTCCGCTTCCTGTTCCCCCTGCTTCCGTTCTTaGTTGCCTGTACCCAGGAATGAGGTATTGAATCCCCCATGGCGG | + |
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Preference number: 1 (lower is better) Translates to: LADLSSASCSPCFRS*LPVPRNEVLNPPWR Trigger: CCGCCATGGGGGATTCAATACCTCATTCCTGGGTACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGATAGGTCGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR GCA 90 bp | CGGTTGCTTTGCATCCTCAAAGCGCTGGTGATGGGTGCAGGGAGGTaGTGCGCCTTGGCAGAAGCCTTGCCCAGCTCATCTACAATAGTC | + |
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Preference number: 1 (lower is better) Translates to: RLLCILKALVMGAGR*CALAEALPSSSTIV Trigger: GACTATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGATGCAAAGCAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR GCA 90 bp | CTAAGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTaGAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: LSFGHGYQGLVLRRS*RFRMTLAFIMSPPT Trigger: GGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| 3UTR CCA 90 bp | TGGCCAGTAGTCAGTGAGAAGGGGGCGTGGTTCCTGGATCAGGTTTaGAGAGGAACCGGGACAGAAGGGCCATGGGTCGGGTTTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: WPVVSEKGAWFLDQV*RGTGTEGPWVGFEM Trigger: CATTTCAAACCCGACCCATGGCCCTTCTGTCCCGGTTCCTCTCCAAACCTGATCCAGGAACCACGCCCCCTTCTCACTGACTACTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR GCA 90 bp | ACCCGATCCTCACTGGCCGACCTATCCTCCGCTTCCTGTTCCCCCTaGTTCCGTTCTTGGTTGCCTGTACCCAGGAATGAGGTATTGAAT | + |
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Preference number: 1 (lower is better) Translates to: TRSSLADLSSASCSP*FRSWLPVPRNEVLN Trigger: ATTCAATACCTCATTCCTGGGTACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGATAGGTCGGCCAGTGAGGATCGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR GCA 90 bp | TTGCTTTGCATCCTCAAAGCGCTGGTGATGGGTGCAGGGAGGTGCTaGGCCTTGGCAGAAGCCTTGCCCAGCTCATCTACAATAGTCATG | + |
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Preference number: 1 (lower is better) Translates to: LLCILKALVMGAGRC*ALAEALPSSSTIVM Trigger: CATGACTATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGATGCAAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR TCA 90 bp | CACCAAAACACAAGTAAGACCGCAGGAGAAATGGCCAGTAGTCAGTaGGAAGGGGGCGTGGTTCCTGGATCAGGTTTGGAGAGGAACCGG | + |
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Preference number: 1 (lower is better) Translates to: HQNTSKTAGEMASSQ*EGGVVPGSGLERNR Trigger: CCGGTTCCTCTCCAAACCTGATCCAGGAACCACGCCCCCTTCTCACTGACTACTGGCCATTTCTCCTGCGGTCTTACTTGTGTTTTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR GCA 90 bp | AGGGTCCTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTaGTATGAAGGAAAAAGAAGTCGGGGTAGCACAAGGGTGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: RVLLHPGHGSREGSS*YEGKRSRGSTRVIP Trigger: GGGGATCACCCTTGTGCTACCCCGACTTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAGGACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR GCA 90 bp | CGTGGCCATGCCGTTGCACCGACTCGTGGATGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCATTGTGAGCCTCCCGGTCATCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: RGHAVAPTRGCKSPE*KGVLPHCEPPGHPV Trigger: TACTGGATGACCGGGAGGCTCACAATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACATCCACGAGTCGGTGCAACGGCATGGCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR GCA 90 bp | GCCTTGGCAGAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTaGTGCTGCAGATCCACACCGGCTAGATCCAGGGTCAAAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: ALAEALPSSSTIVMI*CCRSTPARSRVKGH Trigger: GTGACCTTTGACCCTGGATCTAGCCGGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR CCA 90 bp | GTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCAGGGGATaGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VLPARTALKQSLLRG*SYQTKRAGLAGGCR Trigger: CCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR GCA 90 bp | CAGGAATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGTGTCCATGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: QEFSVTGRVWLNVSL*SFWWQLPCWSVHGC Trigger: ACACCCATGGACACTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR GCA 90 bp | GCAGAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTGCTGCTaGAGATCCACACCGGCTAGATCCAGGGTCAAAGGTCACCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: AEALPSSSTIVMICC*RSTPARSRVKGHQN Trigger: GTTTTGGTGACCTTTGACCCTGGATCTAGCCGGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR GCA 90 bp | TTGGCAGAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTGCTaGTGCAGATCCACACCGGCTAGATCCAGGGTCAAAGGTCACCAA | + |
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Preference number: 1 (lower is better) Translates to: LAEALPSSSTIVMIC*CRSTPARSRVKGHQ Trigger: TTGGTGACCTTTGACCCTGGATCTAGCCGGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR CCA 90 bp | AGGCTCCACAGCTACCTTCAGGAATTCTCTGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGCTCTTTTTGGTGGCAGCTTCCGTGC | + |
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Preference number: 1 (lower is better) Translates to: RLHSYLQEFSVTGRV*LNVSLCSFWWQLPC Trigger: GCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTGAAGGTAGCTGTGGAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR TCA 90 bp | AACTTTGAGGAAACCAATAATGGCTCCTTTCCCTGCCGGTCGGGCTaGGGTGTCCTTCAGTATGTAAATAACGTGCCGGTTGCTTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: NFEETNNGSFPCRSG*GVLQYVNNVPVALH Trigger: ATGCAAAGCAACCGGCACGTTATTTACATACTGAAGGACACCTCAGCCCGACCGGCAGGGAAAGGAGCCATTATTGGTTTCCTCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR CCA 90 bp | AGAGACCCCCAGAGCAACATTAGTCTGACATATCTACATAACACTTaGAAAGTAAGAGTTTGGCAATATTGGGAGGACCCGGTTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RDPQSNISLTYLHNT*KVRVWQYWEDPVGK Trigger: CTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATGTAGATATGTCAGACTAATGTTGCTCTGGGGGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCAGCTTTGGGCTACCAGCCCCCAGGGAGTCCCCCTGGTGCGTCTGCGCTCAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SGSFGLPAPRESPWCVCAQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...AGCGCAGACGCACCAGGGGGACTCCCTGGGGGCTGGTAGCCCAAAGCTGCCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR CAA 90 bp | TCCTGCTCTGGAACAAAGGGCCGAAGGGGACCCCGATCCGGTGAGTaGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SCSGTKGRRGPRSGE*PRLLERGGGWAGGV Trigger: CACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCCCCTTCGGCCCTTTGTTCCAGAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACTGGCCGACCTATCCTCCGCTTCCTGTTCCCCCTGCTTCCGTTCTTGGTTAGGGAGTCCCCCTGGTaGGTCTGCGCTGGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LTGRPILRFLFPLLPFLVRESPW*VCAGLG Trigger: GCCCAGCCCAGCGCAGACGCACCAGGGGGACTCCCT...AACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGATAGGTCGGCCAGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTGGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: AGLPPGSVASRRRAVGCGLNVSL*SFWWQL Trigger: AAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAG...CCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGATGGTCGGTCAATGGCCAGTTGGTGGGGCTCCACTCGCTCTTTCTGTAACGGTTCTACCTCATTGTaGGCCTCCCGGTCATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GDGRSMASWWGSTRSFCNGSTSL*ASRSSS Trigger: ACTGGATGACCGGGAGGCTCACAATGAGGTAGAACC...GTTACAGAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGACCATCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR CAA 90 bp | AGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTaGCTCAGGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SHTLVLPARTALKQS*LRGWSYQTKRAGLA Trigger: TGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGGCCTGTTGAATGAATaGGTGAATGAATGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: RRSCRFRMTLAFIMSPPTGLLNE*VNECIH Trigger: ATGGATGCATTCATTCACTCATTCATTCAACAGGCC...GGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGGATGGAAGAGTGGGTTaGAAGTTGCAGGAGGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SGNRTACLWESIHSTGWEDGRVG*KLQEGV Trigger: CACTCCCTCCTGCAACTTGCAACCCACTCTTCCATC...CTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGTGGGAAGCCACACCCTaGTCCTACCAGCAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: ETDSLSEESGGVCVSPAEWEATP*SYQQEL Trigger: CAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCCCA...CTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGATCCACACCGGCTAGATCCAGGGTCAAAGGTCACCAAAACACAAGTAAGAAGGGGGCGTGGTTCCTaGATCAGGTTTGGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ADPHRLDPGSKVTKTQVRRGRGS*IRFGEE Trigger: TTCCTCTCCAAACCTGATCCAGGAACCACGCCCCCT...TCTTACTTGTGTTTTGGTGACCTTTGACCCTGGATCTAGCCGGTGTGGATCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR CAA 90 bp | GCAGGATTAGAGCTACTAGTGGGCACTGTGAAGGGAATTAATCCATaGGCAGGACACTCCTTAAAGGTTTCCCTGGCAGAGGAGGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: AGLELLVGTVKGINP*AGHSLKVSLAEEAL Trigger: AAGGGCCTCCTCTGCCAGGGAAACCTTTAAGGAGTGTCCTGCCAATGGATTAATTCCCTTCACAGTGCCCACTAGTAGCTCTAATCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR CAA 90 bp | CAGAGCTTGCTCAGGGGATGGAGTTATCAGACTAAAAGGGCAGGTTaGGCAGGAGGATGCAGGATTAGAGCTACTAGTGGGCACTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QSLLRGWSYQTKRAG*AGGCRIRATSGHCE Trigger: TTCACAGTGCCCACTAGTAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGAGTGGGTTGCAAGTTaGAGGAGGGAGTGTATCTGC | + |
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Preference number: 2 (lower is better) Translates to: GDGVIRLKGQVWQEDAGLEWVAS*RRECIC Trigger: GCAGATACACTCCCTCCTGCAACTTGCAACCCACTC...TAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | GTCGGTCAATGGCCAGTTGGTGGGGCTCCACTCGCTCTTTCTGTAACATATGCTATAGTCATGATTTGCTaGTGCAGATCCACACCGGCT | + |
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Preference number: 2 (lower is better) Translates to: VGQWPVGGAPLALSVTYAIVMIC*CRSTPA Trigger: AGCCGGTGTGGATCTGCAGCAGCAAATCATGACTAT...AGCATATGTTACAGAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR-3UTR CCA 90 bp | CCGGCTAGATCCAGGGTCAAAGGTCACCAAAACACAAGTAAGACCGCAGGAGAATTCCTGGATCAGGTTTaGAGAGGAACCGGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PARSRVKGHQNTSKTAGEFLDQV*RGTGTE Trigger: TTCTGTCCCGGTTCCTCTCCAAACCTGATCCAGGAA...TTCTCCTGCGGTCTTACTTGTGTTTTGGTGACCTTTGACCCTGGATCTAGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGATGGAAGAGTGGGTTaGAAGTTGCAGGAGGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RDLGTEQPVCGRVFIAQVDGRVG*KLQEGV Trigger: CACTCCCTCCTGCAACTTGCAACCCACTCTTCCATC...AACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGTACAAAGAGCTTCTTGTATCCAACTTTGAGGAAACCAATAATGGCTCCAGCGCTGGTGATGGGTaGAGGGAGGTGCTGCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: IQYKELLVSNFEETNNGSSAGDG*REVLRL Trigger: AAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCT...GGAGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTCCTGCTCCCAAGGACTTTAGGGGACACATTGAGGCACCTGATCTAATGAGAACAGCCTGTCTGTaGGAGAGTATTCATAGCACA | + |
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Preference number: 2 (lower is better) Translates to: GGPAPKDFRGHIEAPDLMRTACL*ESIHST Trigger: TGTGCTATGAATACTCTCCCACAGACAGGCTGTTCT...CATTAGATCAGGTGCCTCAATGTGTCCCCTAAAGTCCTTGGGAGCAGGACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAACCGTAAGCAGAGTGTaGTTCTCTAGGGAGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLHPGHGSREGSSCYEGKTVSRV*FSRESV Trigger: TACTGACTCCCTAGAGAAGCACACTCTGCTTACGGT...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAATTCATAGCACAGGTTaGGAGTACAGGGGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLHPGHGSREGSSCYEGKIHSTG*EYRGVF Trigger: GAAGACACCCCTGTACTCCCAACCTGTGCTATGAAT...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACCAGCAAGAACTGCTCTaGAGCAGAGCTTGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VIPISSQDNLTSVFTKEDQQELL*SRACSG Trigger: CCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTG...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | CATAACACTTGGAAAGTAAGAGTTTGGCAATATTGGGAGGACCCGGTTGGGAAGCCTACCAGCAAGAACTaGTCTGAAGCAGAGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: HNTWKVRVWQYWEDPVGKPTSKN*SEAELA Trigger: AGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGG...CTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACAGTCTGTGTGTCTCCTaGAGAGACCCCCAGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: VIPISSQDNLTSVFTKEDSLCVS*RDPQSN Trigger: GTTGCTCTGGGGGTCTCTGCAGGAGACACACAGACT...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTATCTTGATGGAAGAGTaGGTTGCAAGTTGCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KRSGNRTACLWESIHSTGILMEE*VASCRR Trigger: CCTCCTGCAACTTGCAACCCACTCTTCCATCAAGAT...ACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGGCTAGTTAGAACCCTGGCAACCCAGTTGTTCAAGAAAGAGGAAGAAAAAGAGTGGGTTGCAAGTTaGAGGAGGGAGTGTATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VRLVRTLATQLFKKEEEKEWVAS*RRECIC Trigger: GCAGATACACTCCCTCCTGCAACTTGCAACCCACTC...TTTTTCTTCCTCTTTCTTGAACAACTGGGTTGCCAGGGTTCTAACTAGCCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| 3UTR-3UTR CCA 90 bp | TACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAAAGCTTGCTCAGGGGATaGAGTTATCAGACTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YTLGMEAGKEALAMKEKESLLRG*SYQTKR Trigger: CCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCT...TTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGGCTAGTTAGAACCCTGGCAACCCAGTTGTTCAAGAAAGAGGAAGAAAAAATCTTGATGGAAGAGTaGGTTGCAAGTTGCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VRLVRTLATQLFKKEEEKILMEE*VASCRR Trigger: CCTCCTGCAACTTGCAACCCACTCTTCCATCAAGAT...TTTTTCTTCCTCTTTCTTGAACAACTGGGTTGCCAGGGTTCTAACTAGCCTAAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGCCTGTTGAATGAATaGGTGAATGAATGCATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGLLNE*VNECIH Trigger: ATGGATGCATTCATTCACTCATTCATTCAACAGGCC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| 3UTR CCA 72 bp | ACCAGCCCCCAGGGAGTCCCCCTGGTGCGTCTGCGCTaGGCTGGGCTGCCTCCAGGGTCAGTGGCCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TSPQGVPLVRLR*AGLPPGSVASR Trigger: TCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGGGGGACTCCCTGGGGGCTGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR GCA 72 bp | AGGGAGTCCCCCTGGTGCGTCTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RESPWCVCAGLG*LQGQWPAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGGGGGACTCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR CCA 72 bp | GGTGAGTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTaGGCTGGAGGTGTGGCACGCCGAGGGGCCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GELPRLLERGGG*AGGVARRGALF Trigger: GAACAGGGCCCCTCGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR CCA 72 bp | AGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGAGCGAAGCAGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVSGQQKACSRV*GTETQGAKQLL Trigger: CAGGAGCTGCTTCGCTCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTGGGGGCTCCCTCTGCTCTTTTaGGTGGCAGCTTCCGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WAASRVSGQQKACSRVWGLPLLF*VAASVL Trigger: CAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAG...CCCCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR TCA 72 bp | CTCTGGAACAAAGGGCCGAAGGGGACCCCGATCCGGTaGGTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWNKGPKGTPIR*VAQAARTWRWV Trigger: CACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCCCCTTCGGCCCTTTGTTCCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR TCA 72 bp | AAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATaGCCCTGGCGTTCATTATGTCCCCACCCACCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KAWCCGVPAGFE*PWRSLCPHPPS Trigger: GGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCTGGCAGAGGAGGCCCTaGGACCTCTGGTGGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSHTLVLPARTALKQSLLWQRRP*DLWWSG Trigger: TCCAGACCACCAGAGGTCCAAGGGCCTCCTCTGCCA...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR GCA 72 bp | TCACTGGCCGACCTATCCTCCGCTTCCTGTTCCCCCTaGTTCCGTTCTTGGTTGCCTGTACCCAGGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLADLSSASCSP*FRSWLPVPRNE Trigger: CTCATTCCTGGGTACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGATAGGTCGGCCAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR GCA 72 bp | GGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTaGAGGTTTCGAATGACCCTGGCGTTCATTATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GHGYQGLVLRRS*RFRMTLAFIMS Trigger: GGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| 3UTR TCA 72 bp | TCCGTTCTTGGTTGCCTGTACCCAGGAATGAGGTATTaGATCCCCCATGGCGGCTGTAGTGGCAGCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SVLGCLYPGMRY*IPHGGCSGSFG Trigger: CCCAAAGCTGCCACTACAGCCGCCATGGGGGATTCAATACCTCATTCCTGGGTACAGGCAACCAAGAACGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR TCA 72 bp | TGGTGGGGCTCCACTCGCTCTTTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGGCCATGCCGTTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: WWGSTRSFCNIC*KSSRPWPCRCT Trigger: GGTGCAACGGCATGGCCACGGGCGAGAACTTTTTCAGCATATGTTACAGAAAGAGCGAGTGGAGCCCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR GCA 72 bp | GTTGGGAAGCCACACCCTGGTCCTACCAGCAAGAACTaGTCTGAAGCAGAGCTTGCTCAGGGGATGGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VGKPHPGPTSKN*SEAELAQGMEL Trigger: TAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CCA 72 bp | TTGAGCAGCTTCGGCGATGGTCGGTCAATGGCCAGTTaGTGGGGCTCCACTCGCTCTTTCTGTAACATATGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSFGDGRSMAS*WGSTRSFCNIC Trigger: GCATATGTTACAGAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGACCATCGCCGAAGCTGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR TCA 72 bp | GAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTaGAGCAGAGCTTGCTCAGGGGATGGAGTTATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EATPWSYQQELL*SRACSGDGVIR Trigger: TCTGATAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR TCA 72 bp | ACAAGTAAGACCGCAGGAGAAATGGCCAGTAGTCAGTaGGAAGGGGGCGTGGTTCCTGGATCAGGTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKTAGEMASSQ*EGGVVPGSGLE Trigger: CTCCAAACCTGATCCAGGAACCACGCCCCCTTCTCACTGACTACTGGCCATTTCTCCTGCGGTCTTACTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR GCA 72 bp | GCCGTTGCACCGACTCGTGGATGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCATTGTGAGCCTCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: AVAPTRGCKSPE*KGVLPHCEPPG Trigger: ACCGGGAGGCTCACAATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACATCCACGAGTCGGTGCAACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR CCA 72 bp | ATGAATGCATCCATACTGAGGACTAAGCTTTGGCCATaGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MNASILRTKLWP*LPRPGAAAFLQ Trigger: CTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAGTCCTCAGTATGGATGCATTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGCTAGATCCAGGGTCAAAGGTCACCAAAACACAAGTAAGACCGCAGGAGAAGTTCCTGGATCAGGTTaGGAGAGGAACCGGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PARSRVKGHQNTSKTAGEVPGSG*ERNRDR Trigger: TCTGTCCCGGTTCCTCTCCAAACCTGATCCAGGAAC...TTCTCCTGCGGTCTTACTTGTGTTTTGGTGACCTTTGACCCTGGATCTAGCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR GCA 72 bp | GAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTaGTGCTGCAGATCCACACCGGCTAGATCCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EALPSSSTIVMI*CCRSTPARSRV Trigger: GACCCTGGATCTAGCCGGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR CCA 72 bp | GAAAGTAAGAGTTTGGCAATATTGGGAGGACCCGGTTaGGAAGCCACACCCTGGTCCTACCAGCAAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ESKSLAILGGPG*EATPWSYQQEL Trigger: CAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CCA 72 bp | GGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGGAGTGTCCATGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRVWLNVSLCSF*WQLPCWSVHGC Trigger: ACACCCATGGACACTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAAAGGGGTTCTACCTCATTGTGAGCCTCCCGGTCATCCAGTACAAAGAGCTGCCTTGGCAGAAGCCTaGCCCAGCTCATCTACAATA | + |
|
Preference number: 3 (lower is better) Translates to: CKGVLPHCEPPGHPVQRAALAEA*PSSSTI Trigger: TATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC...AGCTCTTTGTACTGGATGACCGGGAGGCTCACAATGAGGTAGAACCCCTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR GCA 72 bp | TCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVTGRVWLNVSL*SFWWQLPCWSV Trigger: GACACTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR GCA 72 bp | GCCTTGCCCAGCTCATCTACAATAGTCATGATTTGCTaGTGCAGATCCACACCGGCTAGATCCAGGGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALPSSSTIVMIC*CRSTPARSRVK Trigger: TTTGACCCTGGATCTAGCCGGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| 3UTR CCA 72 bp | GCAAGAACTGCTCTGAAGCAGAGCTTGCTCAGGGGATaGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARTALKQSLLRG*SYQTKRAGLAG Trigger: TCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTCCTGCTCCCAAGGACTTTAGGGGACACATTGAGGCACCTGATCTAATGTTGGAAAGTAAGAGTTaGGCAATATTGGGAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: GGPAPKDFRGHIEAPDLMLESKS*AILGGP Trigger: GGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAA...CATTAGATCAGGTGCCTCAATGTGTCCCCTAAAGTCCTTGGGAGCAGGACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR TCA 72 bp | TCCTGGGTTCTACTGCCAAGAGACAGACAGCTTATCTaGAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SWVLLPRDRQLI*RKWWSLCVSCR Trigger: TCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTTGGCAGTAGAACCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR GCA 72 bp | AGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATaGAGGATTAGAGCTACTAGTGGGCACTGTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SYQTKRAGLAGG*RIRATSGHCEG Trigger: CCCTTCACAGTGCCCACTAGTAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CCA 72 bp | ACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTaGGAGTACAGGGGTGTCTTCTGTGGTAAGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TACLWESIHSTG*EYRGVFCGKKS Trigger: GCTTTTCTTACCACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| 3UTR CCA 72 bp | CTACATAACACTTGGAAAGTAAGAGTTTGGCAATATTaGGAGGACCCGGTTGGGAAGCCACACCCTGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LHNTWKVRVWQY*EDPVGKPHPGP Trigger: AGGACCAGGGTGTGGCTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTCCTGCTCCCAAGGACTTTAGGGGACACATTGAGGCACCTGATCTAATGAAGGGAATTAATCCATaGGCAGGACACTCCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGPAPKDFRGHIEAPDLMKGINP*AGHSLK Trigger: CTTTAAGGAGTGTCCTGCCAATGGATTAATTCCCTT...CATTAGATCAGGTGCCTCAATGTGTCCCCTAAAGTCCTTGGGAGCAGGACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CCA 72 bp | AGCTACCTTCAGGAATTCTCTGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGCTCTTTTTGGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SYLQEFSVTGRV*LNVSLCSFWWQ Trigger: CTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTGAAGGTAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR CCA 72 bp | CTGACATATCTACATAACACTTGGAAAGTAAGAGTTTaGCAATATTGGGAGGACCCGGTTGGGAAGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LTYLHNTWKVRV*QYWEDPVGKPH Trigger: GTGTGGCTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATGTAGATATGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGCTCTCAGAGAGGAAGTaGGGGGCCGGTGCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAQAARTWRWVGWRCGTPLSERK*GAGADG Trigger: CCCATCAGCACCGGCCCCCCACTTCCTCTCTGAGAG...CGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGGGGGTTCTGGGGCAGTaGAATAGTCCCAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAQAARTWRWVGWRCGTPGVLGQ*NSPSWA Trigger: GGCCCAGCTGGGACTATTCCACTGCCCCAGAACCCC...CGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGAGGGAAAAGTTCTCGCCCGTaGCCATGCCGTTGCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLLERGGGWAGGVARRGKSSRP*PCRCTD Trigger: GTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTT...CCCTCGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGGCGATGGTCGGTCAATaGCCAGTTGGTGGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAQAARTWRWVGWRCGTPAMVGQ*PVGGAP Trigger: TGGAGCCCCACCAACTGGCCATTGACCGACCATCGC...CGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| 3UTR CAA 72 bp | GGAACAAAGGGCCGAAGGGGACCCCGATCCGGTGAGTaGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTKGRRGPRSGE*PRLLERGGGWA Trigger: AGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCCCCTTCGGCCCTTTGTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR TCA 90 bp | GGCGTGGTTCCTGGATCAGGTTTGGAGAGGAACCGGGACAGAAGGGCCATGGGTGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVVPGSGLERNRDRRAMGAGPAR*SAPGTA Trigger: CGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGC...ACCCATGGCCCTTCTGTCCCGGTTCCTCTCCAAACCTGATCCAGGAACCACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGAAGGGGACCCCGATCCGGTGAGTTGCCCAGGCTGCTAGAACGTGGAGGTCGGTCAATGGCCAGTTaGTGGGGCTCCACTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRGPRSGELPRLLERGGRSMAS*WGSTRS Trigger: AGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCG...ACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCCCCTTCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VSNDPGVHYVPTHRPGLGAGGRR*WSSTVI Trigger: GATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGC...CCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAFLQVSNDPGVHYVPTCAGLG*LQGQWP Trigger: TGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCA...GGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRRSCRFRMTLAFIMSPPGGRRC*SSTVIR Trigger: GCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCC...GGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | CGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSCRFRMTLAFIMSPPTVAGPAR*SAPGTA Trigger: CGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGC...GACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSHTLVLPARTALKQSLLAGGRR*WSSTVI Trigger: GATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGC...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGACGAGAGTGTCGAGTTaGTCTCAGAGAGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAQAARTWRWVGWRCGTPTRVSS*SQRGSG Trigger: CCCACTTCCTCTCTGAGAGCAACTCGACACTCTCGT...CGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | GGACCCCGATCCGGTGAGTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTTCAATGGCCAGTTGGTaGGGCTCCACTCGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSGELPRLLERGGGWASMASW*GSTRSF Trigger: GAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGA...AGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTGGGGGTCACCTGTGGGACTGTaGTCTCCAGGTTGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAASRVSGQQKACSRVWGSPVGL*SPGCSA Trigger: AGCACTACAACCTGGAGACCACAGTCCCACAGGTGA...CCCCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCGGCCAGCAGAAGGCGTaGAGTAGGGTGTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AAAFLQVSNDPGVHYVPTGQQKA*SRVWGT Trigger: TGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCC...GGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGGGAGGTGCTGCGCCTTaGCAGAAGCCTTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRMTLAFIMSPPTVQDWGGGAAP*QKPCPA Trigger: AGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCC...CCCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAA 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGCTCTCAGAGAGGAAGTaGGGGGCCGGTGCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSNDPGVHYVPTHRPGLGLSERK*GAGADG Trigger: CCCATCAGCACCGGCCCCCCACTTCCTCTCTGAGAG...CCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACCAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPWLPRPGAAAFLQVSNDQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...GTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSNDPGVHYVPTHRPGLGACSRV*GTETQG Trigger: TCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGC...CCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCTGCCTCCAGGGTCAGTaGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAFLQVSNDPGVHYVPTCLQGQ*PAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCA...GGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGAGCGCTGGTGATGGGTaGAGGGAGGTGCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSNDPGVHYVPTHRPGLSAGDG*REVLRL Trigger: AAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCT...CAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAAGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LDGRVGCKLQEGVYLPSQGGRRC*SSTVIR Trigger: GCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCC...TTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTGCGATGGTCGGTCAATaGCCAGTTGGTGGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPRPGAAAFLQVSNDPGVAMVGQ*PVGGAP Trigger: TGGAGCCCCACCAACTGGCCATTGACCGACCATCGC...AACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCTGCCTCCAGGGTCAGTaGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSHTLVLPARTALKQSLLCLQGQ*PAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCA...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGTCCTCAAAGCGCTGGTaGTGGGTGCAGGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSNDPGVHYVPTHRPGLSSKRW*WVQGGA Trigger: AGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGA...CAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTGGAGGTGTGGCACGCCGTTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAQAARTWRWVGWRCGTPFCNIC*KSSRPW Trigger: CCACGGGCGAGAACTTTTTCAGCATATGTTACAGAA...CGGCGTGCCACACCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGCAGLG*LQGQWP Trigger: TGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCA...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCGCCTTGGCAGAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTGGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLGRSLAQLIYNSHDLGGRRC*SSTVIR Trigger: GCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCC...CAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGCGCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTAAGCAGCTCCTGCTCTaGAACAAAGGGCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRPGAAAFLQVSNDPGVKQLLL*NKGPKG Trigger: CCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTGCTT...AACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLWESIHSTGWEYRGVFCAGPAR*SAPGTA Trigger: CGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGC...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR TCA 90 bp | TTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGGGTTCTACCTCATTGTaGGCCTCCCGGTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRMTLAFIMSPPTVQDWGGSTSL*ASRSSS Trigger: ACTGGATGACCGGGAGGCTCACAATGAGGTAGAACC...CCCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAA 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CLWESIHSTGWEYRGVFCAGGRR*WSSTVI Trigger: GATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGC...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAAGTTTCCTGGCCAGCAGAAGGCGTaGAGTAGGGTGTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EEWVASCRRECICPPKFPGQQKA*SRVWGT Trigger: TGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCC...AGGAAACTTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| CDS-3UTR CCA 90 bp | GGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGVIRLKGQVWQEDAGLGGRRC*SSTVIR Trigger: GCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCC...TAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CCA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCAAAAGTTCTCGCCCGTaGCCATGCCGTTGCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSHTLVLPARTALKQSLLKSSRP*PCRCTD Trigger: GTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTT...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CCA 90 bp | CGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCAAAAGTTCTCGCCCGTaGCCATGCCGTTGCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSCRFRMTLAFIMSPPTVKSSRP*PCRCTD Trigger: GTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTT...GACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CCA 90 bp | GCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCTCAATGGCCAGTTGGTaGGGCTCCACTCGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAAFLQVSNDPGVHYVPTSMASW*GSTRSF Trigger: GAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGA...GGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGGGTGTGGGTGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLPPGSVASRRRAVGCGCKSPE*KGVLPH Trigger: ATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACA...CCCACACCCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR GCA 90 bp | TTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGACGAGAGTGTCGAGTTaGTCTCAGAGAGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRMTLAFIMSPPTVQDWGTRVSS*SQRGSG Trigger: CCCACTTCCTCTCTGAGAGCAACTCGACACTCTCGT...CCCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQTAYLKKVVESVCLLQCAGLG*LQGQWP Trigger: TGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCA...CTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCTCAATGGCCAGTTGGTaGGGCTCCACTCGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSHTLVLPARTALKQSLLSMASW*GSTRSF Trigger: GAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGA...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCTCACCTGTGGGACTGTaGTCTCCAGGTTGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSCRFRMTLAFIMSPPTSPVGL*SPGCSA Trigger: AGCACTACAACCTGGAGACCACAGTCCCACAGGTGA...GGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGCTCTCAGAGAGGAAGTaGGGGGCCGGTGCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGLSERK*GAGADG Trigger: CCCATCAGCACCGGCCCCCCACTTCCTCTCTGAGAG...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGTGCCTCCAGGGTCAGTaGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGCLQGQ*PAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCA...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | CGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSCRFRMTLAFIMSPPTVAYSGT*AASAMV Trigger: GACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGC...GACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGATAGTCATGATTTGCTaGTGCAGATCCACACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSNDPGVHYVPTHRPGLGIVMIC*CRSTRA Trigger: GGCCCGTGTGGATCTGCAGCAGCAAATCATGACTAT...CCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGGTGCAGGGAGGTGCTaGGCCTTGGCAGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLWESIHSTGWEYRGVFCGAGRC*ALAEAL Trigger: CAAGGCTTCTGCCAAGGCGCAGCACCTCCCTGCACC...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAGGCCAGCAGAAGGCGTaGAGTAGGGTGTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGHGSREGSSCYEGKGQQKA*SRVWGT Trigger: TGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCC...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGGGCCAGCAGAAGGCGTaGAGTAGGGTGTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETDSLSEESGGVCVSPAEGQQKA*SRVWGT Trigger: TGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCC...CTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGGGAGGTGCTGCGCCTTaGCAGAAGCCTTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETDSLSEESGGVCVSPAEGGAAP*QKPCPA Trigger: AGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCC...CTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAAGTCAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGHGSREGSSCYEGKRSQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...ACTTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGGTACAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGRVFIAQVGSTGVSSVVQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...TACCACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGHGSREGSSCYEGKACSRV*GTETQG Trigger: TCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGC...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDGVIRLKGQVWQEDAGLACSRV*GTETQG Trigger: TCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGC...TAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAATGCCTCCAGGGTCAGTaGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGHGSREGSSCYEGKCLQGQ*PAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCA...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CAA 72 bp | TCCTCCGCTTCCTGTTCCCCCTGCTTCCGTTCTTGGTaGCCTGTACCCAGGAATGAGGTATTGAATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSASCSPCFRSW*PVPRNEVLNPP Trigger: TGGGGGATTCAATACCTCATTCCTGGGTACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTTCCTCAAAGCGCTGGTaGTGGGTGCAGGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLWESIHSTGWEYRGVFCSSKRW*WVQGGA Trigger: AGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGA...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGAGCTAAGCGCTGGTGATGGGTaGAGGGAGGTGCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVIRLKGQVWQEDAGLELSAGDG*REVLRL Trigger: AAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCT...TAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGTGGTGGCAGCTTCCGTaGTGGAGGGTGCTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQTAYLKKVVESVCLLQWWQLP*WRVLMG Trigger: GCCCATCAGCACCCTCCAGCACGGAAGCTGCCACCA...CTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056034.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTGGAGGTGCTGCGCCTTaGCAGAAGCCTTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRSGNRTACLWESIHSTGGGAAP*QKPCPA Trigger: AGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCC...ACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAATCAATGGCCAGTTGGTaGGGCTCCACTCGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDGRVGCKLQEGVYLPSQSMASW*GSTRSF Trigger: GAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGA...TTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGCGATGGTCGGTCAATaGCCAGTTGGTGGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWESIHSTGWEYRGVFCAMVGQ*PVGGAP Trigger: TGGAGCCCCACCAACTGGCCATTGACCGACCATCGC...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAATCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGRVGCKLQEGVYLPSQSLCSF*WQLPCW Trigger: CCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGA...TTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPRPGAAAFLQVSNDPGVVTGRV*LNVSLC Trigger: GCAGAGGGAGACATTAAGCCATACTCTTCCAGTGAC...AACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGAAGCAGCTCCTGCTCTaGAACAAAGGGCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNRTACLWESIHSTGWEKQLLL*NKGPKG Trigger: CCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTGCTT...CTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| CDS-3UTR CCA 90 bp | CGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCCCTGCTTCCGTTCTTaGTTGCCTGTGGAAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCRFRMTLAFIMSPPTVPCFRS*LPVEIP Trigger: TGGTATTTCCACAGGCAACCAAGAACGGAAGCAGGG...GACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDAGPAR*SAPGTA Trigger: CGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGC...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGGGTTCTACCTCATTGTaGGCCTCCCGGTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRTACLWESIHSTGWEGSTSL*ASRSSS Trigger: ACTGGATGACCGGGAGGCTCACAATGAGGTAGAACC...CTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAAGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDGRVGCKLQEGVYLPSQAYSGT*AASAMV Trigger: GACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGC...TTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAAGTTTCCTACGAGAGTGTCGAGTTaGTCTCAGAGAGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEWVASCRRECICPPKFPTRVSS*SQRGSG Trigger: CCCACTTCCTCTCTGAGAGCAACTCGACACTCTCGT...AGGAAACTTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGACTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGHGYQGLVLRRSCRFRLNVSL*SFWWQL Trigger: AAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAG...TCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAGGGAGTCCCCCTGGTaGGTCTGCGCTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLRESPW*VCAGLG Trigger: GCCCAGCCCAGCGCAGACGCACCAGGGGGACTCCCT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR CCA 90 bp | GGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAAAAAGTTCTCGCCCGTaGCCATGCCGTTGCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDGVIRLKGQVWQEDAGLKSSRP*PCRCTD Trigger: GTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTT...TAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTCGGTCAATGGCCAGTTaGTGGGGCTCCACTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLGTEQPVCGRVFIAQVRSMAS*WGSTRS Trigger: AGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCG...AACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCACGGTCAATGGCCAGTTaGTGGGGCTCCACTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QETDSLSEESGGVCVSPARSMAS*WGSTRS Trigger: AGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCG...TGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCACACCCTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTTGCTCGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHTLVLPARTALKQSLLVTGRV*LNVSLC Trigger: GCAGAGGGAGACATTAAGCCATACTCTTCCAGTGAC...GAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAGGGTGTGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGGTATGGCAGCTTCCGTGCTaGAGGGTGCTGATGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CGRVFIAQVGSTGVSSVVWQLPC*RVLMGK Trigger: TTTGCCCATCAGCACCCTCCAGCACGGAAGCTGCCA...TACCACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056034.13 |
||
| CDS-3UTR CCA 90 bp | CGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCGTTCTTGGTTGCCTGTaGAAATACCAGGCATCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCRFRMTLAFIMSPPTVVLGCL*KYQASR Trigger: CCTAGATGCCTGGTATTTCCACAGGCAACCAAGAAC...GACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLAGPAR*SAPGTA Trigger: CGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
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| CDS-3UTR TCA 90 bp | CTAAGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTTTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFGHGYQGLVLRRSCRFFCNIC*KSSRPW Trigger: CCACGGGCGAGAACTTTTTCAGCATATGTTACAGAA...AAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTGGTGGCAGCTTCCGTGCGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVWLNVSLCSFWWQLPCAYSGT*AASAMV Trigger: GACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGC...GCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLAGGRR*WSSTVI Trigger: GATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTACAAAGAGCTTCTTGTATCCAACTTTGAGGAAACCAATAATGGCTCCGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IQYKELLVSNFEETNNGSAGGRR*WSSTVI Trigger: GATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGC...GGAGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGACAATAGTCATGATTTaGTGCTGCAGATCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: QVSNDPGVHYVPTHRPGLTIVMI*CCRSTR Trigger: CCGTGTGGATCTGCAGCAGCAAATCATGACTATTGT...CAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLCAGLG*LQGQWP Trigger: TGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGGRRC*SSTVIR Trigger: GCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATCTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCAAGCAGCTCCTGCTCTaGAACAAAGGGCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNLDGRVGCKLQEGVYLPKQLLL*NKGPKG Trigger: CCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTGCTT...GGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAGATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGAGCTAAAGCAGCTCCTGCTCTaGAACAAAGGGCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVIRLKGQVWQEDAGLELKQLLL*NKGPKG Trigger: CCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTGCTT...TAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAAGTGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPGHGSREGSSCYEGKRSAYSGT*AASAMV Trigger: GACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGC...ACTTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACGGTGCAGGGAGGTGCTaGGCCTTGGCAGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDGAGRC*ALAEAL Trigger: CAAGGCTTCTGCCAAGGCGCAGCACCTCCCTGCACC...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACAGCGCTGGTGATGGGTaGAGGGAGGTGCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDSAGDG*REVLRL Trigger: AAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCT...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCTGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSCRFRMTLAFIMSPPCKSPE*KGVLPH Trigger: ATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACA...GGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGTGTGTGTGACCTGGTaGGTCTGCGCTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLVCVTW*VCAGLG Trigger: GCCCAGCCCAGCGCAGACGCACCAGGTCACACACAC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGTCACCTGTGGGACTGTaGTCTCCAGGTTGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETDSLSEESGGVCVSPAESPVGL*SPGCSA Trigger: AGCACTACAACCTGGAGACCACAGTCCCACAGGTGA...CTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCTAGTTAGAACCCTGGCAACCCAGTTGTTCAAGAAAGAGGAAGAAAAACTCTCAGAGAGGAAGTaGGGGGCCGGTGCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLVRTLATQLFKKEEEKLSERK*GAGADG Trigger: CCCATCAGCACCGGCCCCCCACTTCCTCTCTGAGAG...TTTTTCTTCCTCTTTCTTGAACAACTGGGTTGCCAGGGTTCTAACTAGCCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGATCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTAYLKKVVESVCLLQRSLCSF*WQLPCW Trigger: CCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGA...TCTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCTAGTTAGAACCCTGGCAACCCAGTTGTTCAAGAAAGAGGAAGAAAAAGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRLVRTLATQLFKKEEEKACSRV*GTETQG Trigger: TCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGC...TTTTTCTTCCTCTTTCTTGAACAACTGGGTTGCCAGGGTTCTAACTAGCCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| 3UTR CAA 72 bp | CTGGTCCTACCAGCAAGAACTGCTCTGAAGCAGAGCTaGCTCAGGGGATGGAGTTATCAGACTAAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLPARTALKQS*LRGWSYQTKRA Trigger: TGCCCTTTTAGTCTGATAACTCCATCCCCTGAGCAAGCTCTGCTTCAGAGCAGTTCTTGCTGGTAGGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| 3UTR CAA 72 bp | CATATGCTGAAAAAGTTCTCGCCCGTGGCCATGCCGTaGCACCGACTCGTGGATGTAAAAGTCCAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: HMLKKFSPVAMP*HRLVDVKVQNA Trigger: TGCATTCTGGACTTTTACATCCACGAGTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTTTCAGCATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| CDS-3UTR TCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACTCCTCAAAGCGCTGGTaGTGGGTGCAGGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDSSKRW*WVQGGA Trigger: AGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGA...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCCCAAGTTTCCTTTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEWVASCRRECICPPKFPFCNIC*KSSRPW Trigger: CCACGGGCGAGAACTTTTTCAGCATATGTTACAGAA...AGGAAACTTGGGAGGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGTGCAGGGAGGTGCTaGGCCTTGGCAGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGAGRC*ALAEAL Trigger: CAAGGCTTCTGCCAAGGCGCAGCACCTCCCTGCACC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAGCGCTGGTGATGGGTaGAGGGAGGTGCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSAGDG*REVLRL Trigger: AAGGCGCAGCACCTCCCTGCACCCATCACCAGCGCT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGCCAGCAGAAGGCGTaGAGTAGGGTGTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGQQKA*SRVWGT Trigger: TGTCCCCCACACCCTACTGCACGCCTTCTGCTGGCC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGACATATCTACATAACACTTGGAAAGTAAGAGTTTGGCAATATTGGGAGTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTYLHNTWKVRVWQYWECAGLG*LQGQWP Trigger: TGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCA...CTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATGTAGATATGTCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGGTGGCAGCTTCCGTaGTGGAGGGTGCTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLWWQLP*WRVLMG Trigger: GCCCATCAGCACCCTCCAGCACGGAAGCTGCCACCA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077494.13 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGAGGTGCTGCGCCTTaGCAGAAGCCTTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGGAAP*QKPCPA Trigger: AGCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACGCGATGGTCGGTCAATaGCCAGTTGGTGGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDAMVGQ*PVGGAP Trigger: TGGAGCCCCACCAACTGGCCATTGACCGACCATCGC...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTGGTGGCAGCTTCCGTGCAAAGTTGTTCACCTGTaGGACTGTGGTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRVWLNVSLCSFWWQLPCKVVHL*DCGLQV Trigger: AACCTGGAGACCACAGTCCCACAGGTGAACAACTTT...GCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCTCTCAGAGAGGAAGTaGGGGGCCGGTGCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLLSERK*GAGADG Trigger: CCCATCAGCACCGGCCCCCCACTTCCTCTCTGAGAG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNRTACLWESIHSTGWEVTGRV*LNVSLC Trigger: GCAGAGGGAGACATTAAGCCATACTCTTCCAGTGAC...CTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCGTGCAGTAGGGTGTaGGGGACAGAGACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLACSRV*GTETQG Trigger: TCCCTGCGTCTCTGTCCCCCACACCCTACTGCACGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGCCTCCAGGGTCAGTaGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLCLQGQ*PAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCCTCAAAGCGCTGGTaGTGGGTGCAGGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSSKRW*WVQGGA Trigger: AGCACCTCCCTGCACCCATCACCAGCGCTTTGAGGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGATAGTCATGATTTGCTaGTGCAGATCCACACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRQTAYLKKVVESVCLLQIVMIC*CRSTRA Trigger: GGCCCGTGTGGATCTGCAGCAGCAAATCATGACTAT...CTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCATAGTCATGATTTGCTaGTGCAGATCCACACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNLDGRVGCKLQEGVYLPIVMIC*CRSTRA Trigger: GGCCCGTGTGGATCTGCAGCAGCAAATCATGACTAT...GGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGLNVSL*SFWWQL Trigger: AAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAG...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGACCAAGGCCTGGTGCTaGGGCGTTCCTGCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLTKAWC*GVPAGF Trigger: GAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCGGTCAATGGCCAGTTaGTGGGGCTCCACTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLRSMAS*WGSTRS Trigger: AGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCGATGGTCGGTCAATaGCCAGTTGGTGGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLAMVGQ*PVGGAP Trigger: TGGAGCCCCACCAACTGGCCATTGACCGACCATCGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAAAGTTGTTCACCTGTaGGACTGTGGTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGHGSREGSSCYEGKKVVHL*DCGLQV Trigger: AACCTGGAGACCACAGTCCCACAGGTGAACAACTTT...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACGGTTCTACCTCATTGTaGGCCTCCCGGTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDGSTSL*ASRSSS Trigger: ACTGGATGACCGGGAGGCTCACAATGAGGTAGAACC...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAATTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGHGSREGSSCYEGKFCNIC*KSSRPW Trigger: CCACGGGCGAGAACTTTTTCAGCATATGTTACAGAA...TTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGTGCTGCGGCGTTCCTaGAGGTTTCGAATGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLVLRRS*RFRMTL Trigger: CAGGGTCATTCGAAACCTGCAGGAACGCCGCAGCAC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAAAAGTTCTCGCCCGTaGCCATGCCGTTGCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLKSSRP*PCRCTD Trigger: GTCGGTGCAACGGCATGGCCACGGGCGAGAACTTTT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTAAAGTTGTTCACCTGTaGGACTGTGGTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRSGNRTACLWESIHSTGKVVHL*DCGLQV Trigger: AACCTGGAGACCACAGTCCCACAGGTGAACAACTTT...ACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGACATATCTACATAACACTTGGAAAGTAAGAGTTTGGCAATATTGGGAGCAGGCTGCTAGAACGTaGAGGTGGGTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTYLHNTWKVRVWQYWEQAART*RWVGWR Trigger: CCTCCAGCCCACCCACCTCCACGTTCTAGCAGCCTG...CTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATGTAGATATGTCAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAAGCAGCTCCTGCTCTaGAACAAAGGGCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLKQLLL*NKGPKG Trigger: CCCCTTCGGCCCTTTGTTCCAGAGCAGGAGCTGCTT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGGCAGCTTCCGTGCTaGAGGGTGCTGATGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLWQLPC*RVLMGK Trigger: TTTGCCCATCAGCACCCTCCAGCACGGAAGCTGCCA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077494.13 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGTTCTACCTCATTGTaGGCCTCCCGGTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGSTSL*ASRSSS Trigger: ACTGGATGACCGGGAGGCTCACAATGAGGTAGAACC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAACAATAGTCATGATTTaGTGCTGCAGATCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: QETDSLSEESGGVCVSPATIVMI*CCRSTR Trigger: CCGTGTGGATCTGCAGCAGCAAATCATGACTATTGT...TGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGGTTGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWESIHSTGWEYRGVFCGCKSPE*KGVLPH Trigger: ATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACA...ACCACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNRTACLWESIHSTGWECKSPE*KGVLPH Trigger: ATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACA...CTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCAATGGCCAGTTGGTaGGGCTCCACTCGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSMASW*GSTRSF Trigger: GAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACTCACCTGTGGGACTGTaGTCTCCAGGTTGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDSPVGL*SPGCSA Trigger: AGCACTACAACCTGGAGACCACAGTCCCACAGGTGA...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSLCSF*WQLPCW Trigger: CCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| 3UTR CAA 72 bp | CGGTCATCCAGTACAAAGAGCTTCTTGTATCCAACTTaGAGGAAACCAATAATGGCTCCTTTCCCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSTKSFLYPT*RKPIMAPFPAG Trigger: ACCGGCAGGGAAAGGAGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACTGGATGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137182.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLAYSGT*AASAMV Trigger: GACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGACGAGAGTGTCGAGTTaGTCTCAGAGAGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLTRVSS*SQRGSG Trigger: CCCACTTCCTCTCTGAGAGCAACTCGACACTCTCGT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCACCTGTGGGACTGTaGTCTCCAGGTTGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSPVGL*SPGCSA Trigger: AGCACTACAACCTGGAGACCACAGTCCCACAGGTGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCCTGCAGGTTTCGAATaGCCCTGGCGTTCATTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLPAGFE*PWRSLC Trigger: ACATAATGAACGCCAGGGTCATTCGAAACCTGCAGG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGATAGTCATGATTTGCTaGTGCAGATCCACACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLIVMIC*CRSTRA Trigger: GGCCCGTGTGGATCTGCAGCAGCAAATCATGACTAT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCCCCATCTCATCTCAAGACAATCTCACAAGTGTATTTACTAAGGAGGACCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIPISSQDNLTSVFTKEDLNVSL*SFWWQL Trigger: AAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAG...GTCCTCCTTAGTAAATACACTTGTGAGATTGTCTTGAGATGAGATGGGGATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAAAGTTGTTCACCTGTaGGACTGTGGTCTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLKVVHL*DCGLQV Trigger: AACCTGGAGACCACAGTCCCACAGGTGAACAACTTT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGTCACTGGAAGAGTATaGCTTAATGTCTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLVTGRV*LNVSLC Trigger: GCAGAGGGAGACATTAAGCCATACTCTTCCAGTGAC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTTCTGTAACATATGCTaGAAAAGTTCTCGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLFCNIC*KSSRPW Trigger: CCACGGGCGAGAACTTTTTCAGCATATGTTACAGAA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGACAATAGTCATGATTTaGTGCTGCAGATCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLTIVMI*CCRSTR Trigger: CCGTGTGGATCTGCAGCAGCAAATCATGACTATTGT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLLNVSL*SFWWQL Trigger: AAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIALVKNNDTKDLRLTGLCKSPE*KGVLPH Trigger: ATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
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| CDS GCA 90 bp | CGGGCCGGCGTTGTGGTTCCGGGTCGGCGGGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATCCGCTCCGGGAACAGCGCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RAGVVVPGRRAGGRR*WSSTVIRSGNSAST Trigger: TGTGGATGCGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCCGACCCGGAACCACAACGCCGGCCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000137182.8 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS CCA 90 bp | GCCGGCGTTGTGGTTCCGGGTCGGCGGGCCGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGCTCCGGGAACAGCGCATCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: AGVVVPGRRAGGRRC*SSTVIRSGNSASTS Trigger: CGATGTGGATGCGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCCGACCCGGAACCACAACGCCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000137182.8 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS TCA 90 bp | TTCCGGGTCGGCGGGCCGGAGGCCGCAGGTGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCGCATCCACATCGAACGGGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRVGGPEAAGAGPAR*SAPGTAHPHRTGTP Trigger: TGGAGTTCCCGTTCGATGTGGATGCGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCCGACCCGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS CCA 90 bp | ACTCTCATCAGATCGGGGAAGGGAGCTGGTGCGTCTGCGCTGGGCTaGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLIRSGKGAGASALG*AASRVSGQQKACSR Trigger: CCTACTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGCTCCCTTCCCCGATCTGATGAGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | TCCATACTGAGGACTAAGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGCCACACGGGCCGGCGTaGTGGTTCCGGGTCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SILRTKLWPWLPRPGAAAPHGPA*WFRVGG Trigger: CCCGCCGACCCGGAACCACAACGCCGGCCCGTGTGG...CGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAGTCCTCAGTATGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS CCA 90 bp | AGGGAGACTGTAGTCGTATGTGTGTGTGACCTGGTGCGTCTGCGCTaGGCTGGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RETVVVCVCDLVRLR*AGLPPGSVASRRRA Trigger: TGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGGTCACACACACATACGACTACAGTCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | TCCATACTGAGGACTAAGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGGGGAGGTGCTGCGCCTaGGCAGAAGCCTTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SILRTKLWPWLPRPGAAAGRCCA*AEALPS Trigger: GCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCC...CGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAGTCCTCAGTATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | GGACCCCGATCCGGTGAGTTGCCCAGGCTGCTAGAACGTGGAGGTGGGTGGGCTCACGAGAGTGTCGAGTaGCTCTCAGAGAGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRSGELPRLLERGGGWAHESVE*LSERKW Trigger: CCACTTCCTCTCTGAGAGCAACTCGACACTCTCGTG...AGCCCACCCACCTCCACGTTCTAGCAGCCTGGGCAACTCACCGGATCGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| CDS-3UTR CAA 90 bp | CTGCGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCTCGGTCAATGGCCAGTaGGTGGGGCTCCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRSCRFRMTLAFIMSPPSVNGQ*VGLHSL Trigger: GAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGA...GGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | CATAACACTTGGAAAGTAAGAGTTTGGCAATATTGGGAGGACCCGGTTGGGAAGCCACACGGGCCGGCGTaGTGGTTCCGGGTCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HNTWKVRVWQYWEDPVGKPHGPA*WFRVGG Trigger: CCCGCCGACCCGGAACCACAACGCCGGCCCGTGTGG...CTTCCCAACCGGGTCCTCCCAATATTGCCAAACTCTTACTTTCCAAGTGTTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCTTTGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCTCCCTCTGCTCTTTTaGGTGGCAGCTTCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFGHGYQGLVLRRSCRFLPLLF*VAASVL Trigger: CAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAG...AAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCAAAGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | CGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCCCCCTGCTTCCGTTCTaGGTTGCCTGTGGAAATACC | + |
|
Preference number: 5 (lower is better) Translates to: RRSCRFRMTLAFIMSPPTPLLPF*VACGNT Trigger: GGTATTTCCACAGGCAACCAAGAACGGAAGCAGGGG...GGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS TCA 90 bp | CCTGTGGGACTGTGGTCTCCAGGTTGTAGTGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTCGGTCAATGGCCAGTTGGTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVGLWSPGCSAYSGT*AASAMVGQWPVGGA Trigger: AGCCCCACCAACTGGCCATTGACCGACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCACTACAACCTGGAGACCACAGTCCCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000126744.8 ENSMUST00000141132.2 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | CGGCGTTCCTGCAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGCCTTGGCAGAAGCCTaGCCCAGCTCATCTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: RRSCRFRMTLAFIMSPPTALAEA*PSSSTI Trigger: TATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC...GGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTGCAGGAACGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | GGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGAGCTAGGGAGGTGCTGCGCCTaGGCAGAAGCCTTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVIRLKGQVWQEDAGLELGRCCA*AEALPS Trigger: GCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCC...TAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | TACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAAGGGAGGTGCTGCGCCTaGGCAGAAGCCTTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLGMEAGKEALAMKEKEGRCCA*AEALPS Trigger: GCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCC...TTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | CAGGTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGCACGAGAGTGTCGAGTaGCTCTCAGAGAGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVSNDPGVHYVPTHRPGLHESVE*LSERKW Trigger: CCACTTCCTCTCTGAGAGCAACTCGACACTCTCGTG...CAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | TGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACTGCTTCCGTTCTTGGTaGCCTGTGGAAATACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPWLPRPGAAAFLQVSNDCFRSW*PVEIPG Trigger: GCCTGGTATTTCCACAGGCAACCAAGAACGGAAGCA...GTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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| CDS CCA 90 bp | CTCCAGGTTGTAGTGCTTATTCAGGAACTTGAGCAGCTTCGGCGATaGTCGGTCAATGGCCAGTTGGTGGGGCTCCACTCGCTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQVVVLIQELEQLRR*SVNGQLVGLHSLFL Trigger: CAGAAAGAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCACTACAACCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000126744.8 ENSMUST00000141132.2 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS CCA 90 bp | GTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTGGTaGCAGCTTCCGTGCTGGAGCAGCAGGTATGGGATCGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTGRVWLNVSLCSFW*QLPCWSSRYGIGHS Trigger: GCTGTGGCCGATCCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCCACACGGGCCGGCGTaGTGGTTCCGGGTCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLPHGPA*WFRVGG Trigger: CCCGCCGACCCGGAACCACAACGCCGGCCCGTGTGG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAAGTTCGGTCAATGGCCAGTaGGTGGGGCTCCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPGHGSREGSSCYEGKRSSVNGQ*VGLHSL Trigger: GAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGA...ACTTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | GTTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGTGCTTATTCAGGAACTaGAGCAGCTTCGGCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSNDPGVHYVPTHRPGLGCLFRN*SSFGDG Trigger: ACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCA...CCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS CCA 90 bp | TCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGGAGCAGCAGGTATGGGATCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVTGRVWLNVSLCSF*WQLPCWSSRYGIGH Trigger: GTGGCCGATCCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAATCGGTCAATGGCCAGTaGGTGGGGCTCCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YTLGMEAGKEALAMKEKESVNGQ*VGLHSL Trigger: GAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGA...TTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS GCA 90 bp | CAGGAATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGGGTGCTGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QEFSVTGRVWLNVSL*SFWWQLPCWRVLMG Trigger: GCCCATCAGCACCCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000077494.13 |
||
| CDS-3UTR CAA 90 bp | CTCCACAGCTACCTTCAGGAATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCGGTCAATGGCCAGTaGGTGGGGCTCCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHSYLQEFSVTGRVWLNVSVNGQ*VGLHSL Trigger: GAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGA...GACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTGAAGGTAGCTGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS GCA 90 bp | CAGGAATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGCAGCAGGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QEFSVTGRVWLNVSL*SFWWQLPCWSSRYG Trigger: CCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS CCA 90 bp | TATCCTCCGCTTCCTGTTCCCCCTGCTTCCGTTCTTGGTTGCCTGTaGAAATACCAGGCATCTAGGGAGACTGTAGTCGTATGTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YPPLPVPPASVLGCL*KYQASRETVVVCVC Trigger: ACACACACATACGACTACAGTCTCCCTAGATGCCTGGTATTTCCACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGCCTTGGCAGAAGCCTaGCCCAGCTCATCTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGALAEA*PSSSTI Trigger: TATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTGGTGCCTTGGCAGAAGCCTaGCCCAGCTCATCTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: LWESIHSTGWEYRGVFCGALAEA*PSSSTI Trigger: TATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC...ACCACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGGGAGGTGCTGCGCCTaGGCAGAAGCCTTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLGRCCA*AEALPS Trigger: GCTGGGCAAGGCTTCTGCCAAGGCGCAGCACCTCCC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | GGGGATGGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTACACGAGAGTGTCGAGTaGCTCTCAGAGAGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDGVIRLKGQVWQEDAGLHESVE*LSERKW Trigger: CCACTTCCTCTCTGAGAGCAACTCGACACTCTCGTG...TAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCCATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTTATCAGACTAAAAGGGCAGGTTTGGCAGGAGGATGCAGGATTAGAGCTACTCCCTCTGCTCTTTTaGGTGGCAGCTTCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVIRLKGQVWQEDAGLELLPLLF*VAASVL Trigger: CAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAG...TAGCTCTAATCCTGCATCCTCCTGCCAAACCTGCCCTTTTAGTCTGATAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGTGCTTATTCAGGAACTaGAGCAGCTTCGGCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEQPVCGRVFIAQVGSTGCLFRN*SSFGDG Trigger: ACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCA...CCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | AGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTCACGAGAGTGTCGAGTaGCTCTCAGAGAGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDLGTEQPVCGRVFIAQVHESVE*LSERKW Trigger: CCACTTCCTCTCTGAGAGCAACTCGACACTCTCGTG...AACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCTGTAGTGGCAGCTTaGGGCTACCAGCCCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLAVVAA*GYQPPG Trigger: CCCTGGGGGCTGGTAGCCCAAAGCTGCCACTACAGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR CAA 90 bp | TTTCGAATGACCCTGGCGTTCATTATGTCCCCACCCACCGTCCAGGACTGGGGGTTCTTGTATCCAACTTaGAGGAAACCAATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FRMTLAFIMSPPTVQDWGFLYPT*RKPIMA Trigger: AGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAA...CCCCCAGTCCTGGACGGTGGGTGGGGACATAATGAACGCCAGGGTCATTCGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCATGGTTACCAAGGCCTGGTGCTGCGGCGTTCCTGCAGGTTTCGAATGACAGTACAAAGAGCTTCTaGTATCCAACTTTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WPWLPRPGAAAFLQVSNDSTKSF*YPTLRK Trigger: TTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACT...GTCATTCGAAACCTGCAGGAACGCCGCAGCACCAGGCCTTGGTAACCATGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCGGTCAATGGCCAGTaGGTGGGGCTCCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSVNGQ*VGLHSL Trigger: GAGCGAGTGGAGCCCCACCAACTGGCCATTGACCGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTTGCTTATTCAGGAACTaGAGCAGCTTCGGCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLWESIHSTGWEYRGVFCCLFRN*SSFGDG Trigger: ACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCA...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTCCTGCTCCCAAGGACTTTAGGGGACACATTGAGGCACCTGATCTAATGTCAAAGATGACAAAGTaGTTCACCTGTGGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGPAPKDFRGHIEAPDLMSKMTK*FTCGTV Trigger: CACAGTCCCACAGGTGAACAACTTTGTCATCTTTGA...CATTAGATCAGGTGCCTCAATGTGTCCCCTAAAGTCCTTGGGAGCAGGACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCTCCCTCTGCTCTTTTaGGTGGCAGCTTCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLLPLLF*VAASVL Trigger: CAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCCCAGGAATGAGGTATaGAATCCCCCATGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLPRNEV*NPPWRL Trigger: CAGCCGCCATGGGGGATTCAATACCTCATTCCTGGG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 |
||
| CDS-3UTR CAA 90 bp | CAAGAGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCATACAATAGTCATGATTaGCTGCTGCAGATCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: QETDSLSEESGGVCVSPAYNSHD*LLQIHT Trigger: CGTGTGGATCTGCAGCAGCAAATCATGACTATTGTA...TGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCTTGATGGAAGAGTGGGTTGCAAGTTGCAGGAGGGAGTGTATCTGCCCTCAAAGATGACAAAGTaGTTCACCTGTGGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNLDGRVGCKLQEGVYLPSKMTK*FTCGTV Trigger: CACAGTCCCACAGGTGAACAACTTTGTCATCTTTGA...GGGCAGATACACTCCCTCCTGCAACTTGCAACCCACTCTTCCATCAAGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGCACGAGAGTGTCGAGTaGCTCTCAGAGAGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLHESVE*LSERKW Trigger: CCACTTCCTCTCTGAGAGCAACTCGACACTCTCGTG...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061052.12 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | AAAACACAGAAGAACCCACACTTTATTGAGACAACACTGAGAGGGAAAAGGAATCTCCCTCTGCTCTTTTaGGTGGCAGCTTCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTQKNPHFIETTLRGKRNLPLLF*VAASVL Trigger: CAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAG...ATTCCTTTTCCCTCTCAGTGTTGTCTCAATAAAGTGTGGGTTCTTCTGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGGCCTTGGCAGAAGCCTaGCCCAGCTCATCTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLALAEA*PSSSTI Trigger: TATTGTAGATGAGCTGGGCAAGGCTTCTGCCAAGGC...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTGGTTGCTTATTCAGGAACTaGAGCAGCTTCGGCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSLSLEEYGLMSPSALFGCLFRN*SSFGDG Trigger: ACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCA...ACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTCAGGAATTCTCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTGCTTCAAAGATGACAAAGTaGTTCACCTGTGGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFRNSLSLEEYGLMSPSASKMTK*FTCGTV Trigger: CACAGTCCCACAGGTGAACAACTTTGTCATCTTTGA...AGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGAGAATTCCTGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTGGGAGAGTATTCATAGCACAGGTTGGGAGTACAGGGGTGTCTTCTGTTTCTTGTATCCAACTTaGAGGAAACCAATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLWESIHSTGWEYRGVFCFLYPT*RKPIMA Trigger: AGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAA...ACAGAAGACACCCCTGTACTCCCAACCTGTGCTATGAATACTCTCCCACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTGCTTATTCAGGAACTaGAGCAGCTTCGGCGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLCLFRN*SSFGDG Trigger: ACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | TACACCCTGGGCATGGAAGCAGGGAAGGAAGCTCTTGCTATGAAGGAAAAAGAATTCTTGTATCCAACTTaGAGGAAACCAATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YTLGMEAGKEALAMKEKEFLYPT*RKPIMA Trigger: AGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAA...TTCTTTTTCCTTCATAGCAAGAGCTTCCTTCCCTGCTTCCATGCCCAGGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGACAGCTTATCTGAAGAAAGTGGTGGAGTCTGTGTGTCTCCTGCAGAGAAGTACAAAGAGCTTCTaGTATCCAACTTTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQTAYLKKVVESVCLLQRSTKSF*YPTLRK Trigger: TTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACT...TCTCTGCAGGAGACACACAGACTCCACCACTTTCTTCAGATAAGCTGTCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
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| CDS-3UTR CAA 90 bp | AGAGATCTGGGAACAGAACAGCCTGTCTGTGGGAGAGTATTCATAGCACAGGTTAGTACAAAGAGCTTCTaGTATCCAACTTTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDLGTEQPVCGRVFIAQVSTKSF*YPTLRK Trigger: TTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACT...AACCTGTGCTATGAATACTCTCCCACAGACAGGCTGTTCTGTTCCCAGATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000141662.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTACAATAGTCATGATTaGCTGCTGCAGATCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLYNSHD*LLQIHT Trigger: CGTGTGGATCTGCAGCAGCAAATCATGACTATTGTA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTCAAAGATGACAAAGTaGTTCACCTGTGGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSKMTK*FTCGTV Trigger: CACAGTCCCACAGGTGAACAACTTTGTCATCTTTGA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGTTCTTGTATCCAACTTaGAGGAAACCAATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLFLYPT*RKPIMA Trigger: AGCCATTATTGGTTTCCTCAAAGTTGGATACAAGAA...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTGCTCTGGTTAAAAATAACGATACAAAGGATCTGAGGCTGACAGGCCTGAGTACAAAGAGCTTCTaGTATCCAACTTTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIALVKNNDTKDLRLTGLSTKSF*YPTLRK Trigger: TTTCCTCAAAGTTGGATACAAGAAGCTCTTTGTACT...CAGGCCTGTCAGCCTCAGATCCTTTGTATCGTTATTTTTAACCAGAGCAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000149277.8 |
||
| CDS CCA 72 bp | GTGGTTCCGGGTCGGCGGGCCGGAGGCCGCAGGTGCTaGTCCAGCACGGTGATCCGCTCCGGGAACAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVPGRRAGGRRC*SSTVIRSGNSA Trigger: TGCGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCCGACCCGGAACCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000137182.8 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | GTTGTGGTTCCGGGTCGGCGGGCCGGAGGCCGCAGGTaGTGGTCCAGCACGGTGATCCGCTCCGGGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVVPGRRAGGRR*WSSTVIRSGNS Trigger: GCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCCGACCCGGAACCACAAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000137182.8 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS TCA 72 bp | GGCGGGCCGGAGGCCGCAGGTGCTGGTCCAGCACGGTaGTCCGCTCCGGGAACAGCGCATCCACATCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: GGPEAAGAGPAR*SAPGTAHPHRT Trigger: CGTTCGATGTGGATGCGCTGTTCCCGGAGCGGATCACCGTGCTGGACCAGCACCTGCGGCCTCCGGCCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000137182.8 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | GGGGAAGGGAGCTGGTGCGTCTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEGSWCVCAGLG*LQGQWPAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGCTCCCTTCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS CCA 72 bp | AGATCGGGGAAGGGAGCTGGTGCGTCTGCGCTGGGCTaGGCTGCCTCCAGGGTCAGTGGCCAGCAGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSGKGAGASALG*AASRVSGQQKA Trigger: CGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGCTCCCTTCCCCGATCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS GCA 72 bp | GTGTGTGTGACCTGGTGCGTCTGCGCTGGGCTGGGCTaGCTCCAGGGTCAGTGGCCAGCAGAAGGCGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VCVTWCVCAGLG*LQGQWPAEGVQ Trigger: CTGCACGCCTTCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGGTCACACACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS CCA 72 bp | TCATCAGATCGGGGAAGGGAGCTGGTGCGTCTGCGCTaGGCTGGGCTGCCTCCAGGGTCAGTGGCCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSDRGRELVRLR*AGLPPGSVASR Trigger: TCTGCTGGCCACTGACCCTGGAGGCAGCCCAGCCCAGCGCAGACGCACCAGCTCCCTTCCCCGATCTGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056034.13 ENSMUST00000140292.8 ENSMUST00000141662.8 |
||
| CDS CCA 72 bp | GTCTCCCTCTGCTCTTTTTGGTGGCAGCTTCCGTGCTaGAGCAGCAGGTATGGGATCGGCCACAGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: VSLCSFWWQLPC*SSRYGIGHSST Trigger: CGTGCTGCTGTGGCCGATCCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | AATGTCTCCCTCTGCTCTTTTTGGTGGCAGCTTCCGTaGTGGAGCAGCAGGTATGGGATCGGCCACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NVSLCSFWWQLP*WSSRYGIGHSS Trigger: GCTGCTGTGGCCGATCCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | GCCTTGCCCAGCTCATCTACAATAGTCATGATTTGCTaGTGCAGATCCACACGGGCCGGCGTTGTGGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ALPSSSTIVMIC*CRSTRAGVVVP Trigger: CGGAACCACAACGCCGGCCCGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | TTGCCCAGCTCATCTACAATAGTCATGATTTGCTGCTaGAGATCCACACGGGCCGGCGTTGTGGTTCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSSSTIVMICC*RSTRAGVVVPG Trigger: ACCCGGAACCACAACGCCGGCCCGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000141662.8 ENSMUST00000149277.8 |
||
| CDS GCA 72 bp | CCTCCGCTTCCTGTTCCCCCTGCTTCCGTTCTTGGTTaGCTGTGGAAATACCAGGCATCTAGGGAGACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPLPVPPASVLG*LWKYQASRETV Trigger: TACAGTCTCCCTAGATGCCTGGTATTTCCACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAGCGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
||
| CDS CCA 72 bp | GGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGGAGGGTGCTGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRVWLNVSLCSF*WQLPCWRVLMG Trigger: GCCCATCAGCACCCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000077494.13 |
||
| CDS GCA 72 bp | GAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTTaGTGCTGCAGATCCACACGGGCCGGCGTTGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EALPSSSTIVMI*CCRSTRAGVVV Trigger: AACCACAACGCCGGCCCGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS GCA 72 bp | GCCGTTGCACCGACTCGTGGATGTAAAAGTCCAGAATaGAAAGGGGTTCTACCTCATTGTGAGCCTCCCGGN | + |
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Preference number: 6 (lower is better) Translates to: AVAPTRGCKSPE*KGVLPHCEPPG Trigger: NCCGGGAGGCTCACAATGAGGTAGAACCCCTTTGCATTCTGGACTTTTACATCCACGAGTCGGTGCAACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126744.8 |
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| CDS CCA 72 bp | GGAAGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTaGTGGCAGCTTCCGTGCTGGAGCAGCAGGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: GRVWLNVSLCSF*WQLPCWSSRYG Trigger: CCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS CAA 72 bp | AGAAGCCTTGCCCAGCTCATCTACAATAGTCATGATTaGCTGCTGCAGATCCACACGGGCCGGCGTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RSLAQLIYNSHD*LLQIHTGRRCG Trigger: ACCACAACGCCGGCCCGTGTGGATCTGCAGCAGCAAATCATGACTATTGTAGATGAGCTGGGCAAGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS TCA 72 bp | CTGTGGTCTCCAGGTTGTAGTGCTTATTCAGGAACTTaGGCAGCTTCGGCGATGGTCGGTCAATGGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LWSPGCSAYSGT*AASAMVGQWPV Trigger: AACTGGCCATTGACCGACCATCGCCGAAGCTGCTCAAGTTCCTGAATAAGCACTACAACCTGGAGACCACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000056034.13 ENSMUST00000061052.12 ENSMUST00000077494.13 ENSMUST00000126744.8 ENSMUST00000141132.2 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS GCA 72 bp | TCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVTGRVWLNVSL*SFWWQLPCWSS Trigger: GCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS GCA 72 bp | TCTGTCACTGGAAGAGTATGGCTTAATGTCTCCCTCTaGTCTTTTTGGTGGCAGCTTCCGTGCTGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVTGRVWLNVSL*SFWWQLPCWRV Trigger: CACCCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCTTCCAGTGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056034.13 ENSMUST00000077494.13 |
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| CDS CCA 72 bp | AGAGTATGGCTTAATGTCTCCCTCTGCTCTTTTTGGTaGCAGCTTCCGTGCTGGAGCAGCAGGTATGGGATC | + |
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Preference number: 6 (lower is better) Translates to: RVWLNVSLCSFW*QLPCWSSRYGI Trigger: GATCCCATACCTGCTGCTCCAGCACGGAAGCTGCCACCAAAAAGAGCAGAGGGAGACATTAAGCCATACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061052.12 ENSMUST00000141662.8 ENSMUST00000149277.8 |
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| CDS CCA 72 bp | CTTCCTGTTCCCCCTGCTTCCGTTCTTGGTTGCCTGTaGAAATACCAGGCATCTAGGGAGACTGTAGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LPVPPASVLGCL*KYQASRETVVV Trigger: TACGACTACAGTCTCCCTAGATGCCTGGTATTTCCACAGGCAACCAAGAACGGAAGCAGGGGGAACAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149277.8 |
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