Pregenerated sensors for ATAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022360Ensembl transcript IDs: ENSMUST00000038194.5, ENSMUST00000228783.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACATTCAACGTCCCATTATaGAAGAAGCAAATGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: MCLSVHWALGLILTTITTFNVPL*KKQMIS Trigger: TGAAATCATTTGCTTCTTCCATAATGGGACGTTGAA...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| 3UTR-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGTTTTGAGGTCCTCTTaGAAATCACAACTTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: EIPDPYTLDLYNIISINMVLRSS*KSQLEL Trigger: CAATTCAAGTTGTGATTTTCAAGAGGACCTCAAAAC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| 3UTR-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGAGTACAGAATTGTTTTaGGGTCCTCTTGAAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: EIPDPYTLDLYNIISINMSTELF*GPLENH Trigger: GTGATTTTCAAGAGGACCTCAAAACAATTCTGTACT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACACTTCGGGAATGTCTGTaGCCTGGGAGGCAGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTLRECL*PGRQRH Trigger: ATGCCTCTGCCTCCCAGGTCACAGACATTCCCGAAG...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAACAGTGCCTGTCCGGGTaGTGTCACAGCTCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKQCLSG*CHSSLG Trigger: TCCCAGAGAGCTGTGACATCACCCGGACAGGCACTG...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAGTAGAGTCACTGCTGTaGATGGCATGCCTTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTVESLL*MACLRL Trigger: CAGGCGAAGGCATGCCATCCACAGCAGTGACTCTAC...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCCTCCCGCCGCTGTCCTaGAGGCTGAGGAACTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFLPPLS*RLRNSL Trigger: CAGTGAGTTCCTCAGCCTGCAGGACAGCGGCGGGAG...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCTCAACTGAGCAGGTGTaGTGCACGCCACAGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVSTEQV*CTPQEC Trigger: GCACTCCTGTGGCGTGCAGCACACCTGCTCAGTTGA...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACATCTGCATGTGTGTGCTaGCTGTCTTCTGTGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTSACVC*LSSVSL Trigger: GAGCGACACAGAAGACAGCCAGCACACACATGCAGA...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAAGTCACTGCTGTGGATaGCATGCCTTCGCCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKSHCCG*HAFACS Trigger: TGAGCAGGCGAAGGCATGCCATCCACAGCAGTGACT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCTGATGAGCTCCTGCTaGTCTACCTGGGAACCTCTA | + |
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Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVLMSSC*STWEPL Trigger: TAGAGGTTCCCAGGTAGAGCAGCAGGAGCTCATCAG...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAAGCTCTCTGGGAAGCTaGTCTTATTTTCTGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTSSLGS*SYFLQS Trigger: GCTCTGCAGAAAATAAGACCAGCTTCCCAGAGAGCT...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCGGAATGTCTGTGACCTaGGAGGCAGAGGCATCACCC | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFGMSVT*EAEASP Trigger: GGGTGATGCCTCTGCCTCCCAGGTCACAGACATTCC...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAACAGCTGGTGCCAAGTaGGAACTCTGTCCAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKTAGAK*ELCPNP Trigger: AGGATTTGGACAGAGTTCTCACTTGGCACCAGCTGT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTAGTGAGGGTGTCGGCTaGGAGAGGATGGCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISSEGVG*ERMARA Trigger: GGCTCTGGCCATCCTCTCTCAGCCGACACCCTCACT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAATAGACTATGCTGGGTaGTGTTCTCTTAGCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTIDYAG*CSLSFT Trigger: CGTGAAGCTAAGAGAACAGCACCCAGCATAGTCTAT...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCAGGATGGCCAGAGCCTaGTCCATACTGATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFRMARA*SILMSS Trigger: GGAGCTCATCAGTATGGAGCAGGCTCTGGCCATCCT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCTTCCTCTGCTGTCAGTaGTCTTGGTTCAGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFFLCCQ*SWFRRW Trigger: CCACCGCCTGAACCAAGACCACTGACAGCAGAGGAA...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGCGCTGTCCTGCAGGCTaGGGAACTCACTGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMRCPAG*GTHWTG Trigger: ACCTGTCCAGTGAGTTCCTCAGCCTGCAGGACAGCG...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAATGTCATCCATCTTTTaGAGTACAGCTTCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTMSSIF*STASAV Trigger: CACTGCTGAAGCTGTACTTCAAAAGATGGATGACAT...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAAATTTTCTTTTCAACTaGGCAGGTGTGCTGCACGCC | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKNFLFN*AGVLHA Trigger: GGCGTGCAGCACACCTGCTCAGTTGAAAAGAAAATT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACATCTCCACTTTGTTCGTaGAAATGTTCTGCAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTSPLCS*KCSAVG Trigger: TCCAACTGCAGAACATTTGCACGAACAAAGTGGAGA...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAGCACTCATTGGCAAGTaGTCTAGCAACCAGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKALIGK*SSNQGF Trigger: AAAACCCTGGTTGCTAGAGCACTTGCCAATGAGTGC...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCTCTTATCCCCTCGGCTaGACTCATTGGCAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFSYPLG*THWQVL Trigger: GAGCACTTGCCAATGAGTGCAGCCGAGGGGATAAGA...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACATCTTGCAGGAGAAGCTaGGCCACTATAAAACATGTT | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTSCRRS*ATIKHV Trigger: AACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGA...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAAGCTTCAGCACAGATTaGCTTAATATCCGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKSFSTD*LNIRTT Trigger: TGTGGTGCGGATATTAAGTCAATCTGTGCTGAAGCT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAGCTTGCTCCATTTTCTaGACAAGCGCTGTTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKACSIF*TSAVLS Trigger: TGACAAAACAGCGCTTGTTCAGAAAATGGAGCAAGC...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCATGGATGACAGCTGGTaGCAAGTGAGAACTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFMDDSW*QVRTLS Trigger: GGACAGAGTTCTCACTTGGCACCAGCTGTCATCCAT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAACACTGGCTGATTACTaGATACAAATTCTCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: MCLSVHWALGLILTTITTTLADY*IQILQL Trigger: CAACTGGAGAATTTGTATGCAGTAATCAGCCAGTGT...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATCCACACTGCCGTCCTaGTTATCAGTTGTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKSTLPS*LSVVSS Trigger: TGAAGAAACAACTGATAACCAGGACGGCAGTGTGGA...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCGATGTCACAGCTCTCTaGGAAGCTGGTCTTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVDVTAL*EAGLIF Trigger: GAAAATAAGACCAGCTTCCCAGAGAGCTGTGACATC...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAGCTTCACGAATCATTTaGGAACATGCCTCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKASRII*EHASSG Trigger: TCCTGAAGAGGCATGTTCCCAAATGATTCGTGAAGC...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGTCGGCTGAGAGAGGATaGCCAGAGCCTGCTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMSAERG*PEPAPY Trigger: GTATGGAGCAGGCTCTGGCCATCCTCTCTCAGCCGA...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTGAAGAGAGATCCAGCTaGAGCTTCTCGCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISEERSS*SFSLVV Trigger: CACCACCAGCGAGAAGCTTCAGCTGGATCTCTCTTC...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCCTCTTCCGGCAAAGCTaGGTATGGTTTCTCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFLFRQS*VWFLRS Trigger: ACTTCTGAGAAACCATACTCAGCTTTGCCGGAAGAG...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCCAGATGATTCCACACTaGCGTCCTGGTTATCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFQMIPH*RPGYQL Trigger: CAACTGATAACCAGGACGGCAGTGTGGAATCATCTG...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTTTCCAGGCTCCGTGTaGTCTGCATGTGTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISFPGSV*SACVCW Trigger: CCAGCACACACATGCAGAGCACACGGAGCCTGGAAA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGTTTAGAGCTGCAATGTaGCTGGACAGGCCGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMFRAAM*LDRPPT Trigger: TGTTGGCGGCCTGTCCAGTCACATTGCAGCTCTAAA...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATTCTCATTCTGCTCTTaGTCTGGCTTTTTATCACCA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKFSFCS*SGFLSP Trigger: TGGTGATAAAAAGCCAGATCAAGAGCAGAATGAGAA...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCAACATCAGCAAGGCTTaGTCCAATTTTCATTCGATC | + |
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Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVNISKA*SNFHSI Trigger: GATCGAATGAAAATTGGAGCAAGCCTTGCTGATGTT...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAAAAGCACAAGCTCTATaGCTAATAAGACGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: THAVPKAEVSTSHYGRSKKAQAL*LIRRSP Trigger: TGGAGATCGTCTTATTAGGCATAGAGCTTGTGCTTT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGTGCACGCCACAGGAGTaGACGGTACCTTTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMCTPQE*TVPLAS Trigger: AGAAGCTAAAGGTACCGTGCACTCCTGTGGCGTGCA...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCTTCGCTTTATTTTGGTaGCTACATGCCACTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVFALFW*LHATLT Trigger: AGTCAAAGTGGCATGTAGGCACCAAAATAAAGCGAA...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTGCTCTGCATGTGTGTaGTGGCTGTCTTCTGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISCSACV*WLSSVS Trigger: CGACACAGAAGACAGCCAGCACACACATGCAGAGCA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCCCTGCTAGATCGTACTaGAGCCAAACCATCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFPARSY*SQTINF Trigger: GAAATTGATGGTTTGGCTCCAGTACGATCTAGCAGG...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGAAGTGGTTTCACAATaGCAGACAGTGCCTGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMEVVSQ*QTVPVR Trigger: CCGGACAGGCACTGTCTGCCATTGTGAAACCACTTC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCCCACAAATGGATATGTaGGACATAGACTATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFPQMDM*DIDYAG Trigger: CCCAGCATAGTCTATGTCCCACATATCCATTTGTGG...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCAAGATGGTGCGTATTTaGAGGAGCTACAACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFKMVRI*RSYNLS Trigger: AGAGAGGTTGTAGCTCCTCCAAATACGCACCATCTT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTCCTGCTGCTCTACCTaGGAACCTCTAGCTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISSCCST*EPLARV Trigger: GACTCTAGCTAGAGGTTCCCAGGTAGAGCAGCAGGA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTATACTGATGAGCTCCTaGTGCTCTACCTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISILMSS*CSTWEP Trigger: AGGTTCCCAGGTAGAGCAGCAGGAGCTCATCAGTAT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGAGACAAGCGGAATCTTaGTCTTGCAGGAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMRQAES*SCRRSW Trigger: CCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGAGCATGGATGACAGCTaGTGCCAAGTGAGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMSMDDS*CQVRTL Trigger: CAGAGTTCTCACTTGGCACCAGCTGTCATCCATGCT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTTGGGCTTTCTCTGGTaGCGAGGTTTACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISLGFLW*RGLLSS Trigger: ACTGGAAAGTAAACCTCGTCACCAGAGAAAGCCCAA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTCAGCACCTTTCCTCATaGAGAACGCCACTCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISQHLSS*RTPLSY Trigger: ATAAGAGAGTGGCGTTCTTCATGAGGAAAGGTGCTG...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR TCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCAATTTTGCTTTGGCATaGCGTGGTAATAAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFNFALA*RGNKMV Trigger: CACCATCTTATTACCACGTCATGCCAAAGCAAAATT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR GCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGCCATCATCATCCTCTTaGTCTTCCCCCTCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMPSSSS*SSPSSD Trigger: ATCTGAAGAGGGGGAAGAGCAAGAGGATGATGATGG...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCAATCATTTGGGAACATaGCTCTTCAGGAGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFNHLGT*LFRRCC Trigger: ACAACATCTCCTGAAGAGGCATGTTCCCAAATGATT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTAGCACCTCCAAGGCCTaGAGAACTGCTTTCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISSTSKA*RTAFFC Trigger: ACAAAAGAAAGCAGTTCTGCAGGCCTTGGAGGTGCT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCTCCTCTTTAATTATTaGATAAGCAGTGTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSNKLSNTRCSESRSFNVLLFNY*ISSVSQ Trigger: TTGAGAGACACTGCTTATGCAATAATTAAAGAGGAG...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGAGCAAATTGCCTTGTaGAATGTCTGCCATTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMEQIAL*NVCHWS Trigger: ACTCCAATGGCAGACATTTCACAAGGCAATTTGCTC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCTTTACTGATTACAGATaGAAGGTCCATTGGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFFTDYR*KVHWLL Trigger: AAGCAACCAATGGACCTTTCATCTGTAATCAGTAAA...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTTCTTCCGAGATTCCTaGATTTCTTCACAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISFFRDS*ISSQSC Trigger: GCAGCTCTGTGAAGAAATTCAGGAATCTCGGAAGAA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGTGTGTCGCTCCTGCTTaGACTGTTCATAGCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMCVAPA*TVHSIQ Trigger: TTGAATGCTATGAACAGTTCAAGCAGGAGCGACACA...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCATGATCTGGAACAATTaGAGTTTTCTACTGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFMIWNN*SFLLLA Trigger: AGCAAGCAGTAGAAAACTTCAATTGTTCCAGATCAT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTGCTGGTCTTATTTTCTaGAGAGCTGCCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISAGLIF*RAASKS Trigger: GGATTTTGAGGCAGCTCTGCAGAAAATAAGACCAGC...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGACGTGGTAATAAGATaGTGCGTATTTGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMDVVIR*CVFGGA Trigger: AGCTCCTCCAAATACGCACCATCTTATTACCACGTC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGCAGGAGATGTTGTACTaGTGCCAAAAAGAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMQEMLY*CQKEQE Trigger: TTCCTGTTCTTTTTGGCATCAGTACAACATCTCCTG...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCAAAATATTTGTTAACTaGTTGTGGTCCAGCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFRKQKFQRPIMEEANDFKIFVN*LWSSTS Trigger: ACTTGTGCTGGACCACAAGCAGTTAACAAATATTTT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGAAAGAATATAATTGCTaGGCGCATCTGATAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMKEYNC*AHLIGL Trigger: CAGGCCTATCAGATGCGCCCAGCAATTATATTCTTT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTATCAAAGAATATAATTaGTGGGCGCATCTGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISIKEYN*WAHLIG Trigger: GCCTATCAGATGCGCCCAGCAATTATATTCTTTGAT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGATTCTGCTCTTGATCTaGCTTTTTATCACCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMILLLI*LFITNR Trigger: CCTGTTGGTGATAAAAAGCCAGATCAAGAGCAGAAT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR TCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTGCCTACATGCCACTTTaGCTTTTTATGGAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISAYMPL*LFMEFS Trigger: AGAAAATTCCATAAAAAGTCAAAGTGGCATGTAGGC...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGAAGAAGTTTGTGCTTaGTTTCTCAGAGACCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMEEVCA*FLRDLK Trigger: TTTAAGGTCTCTGAGAAACCAAGCACAAACTTCTTC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGCAAATGTTCTGCAGTTaGAGCAATGTTTCTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMQMFCS*SNVSIP Trigger: AGGAATAGAAACATTGCTCCAACTGCAGAACATTTG...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR CCA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTAGGAGAATTTTGCTTTaGCATGACGTGGTAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNYYYCSSASLKHLRLISRRILL*HDVVIR Trigger: TCTTATTACCACGTCATGCCAAAGCAAAATTCTCCT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS-3UTR GCA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGCTTTCAAGTCTATTTTaGTTGTCACTTTCTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: EIPDPYTLDLYNIISINMLSSLF*LSLSST Trigger: GGTAGAAGAAAGTGACAAGCAAAATAGACTTGAAAG...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS TCA 90 bp | CGGCTCGGCGCAATCTGGGCCGCCTCCCGCCGCTGTCCTGCAGGCTaGGGAACTCACTGGACAGGTCCAGAGAGTCGGTGGCCGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGAIWAASRRCPAG*GTHWTGPESRWPRR Trigger: CCTCCTCGGCCACCGACTCTCTGGACCTGTCCAGTGAGTTCCTCAGCCTGCAGGACAGCGGCGGGAGGCGGCCCAGATTGCGCCGAGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS GCA 90 bp | TTCCTCCCGGCTCGGCGCAATCTGGGCCGCCTCCCGCCGCTGTCCTaGAGGCTGAGGAACTCACTGGACAGGTCCAGAGAGTCGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPARRNLGRLPPLS*RLRNSLDRSRESVA Trigger: GGCCACCGACTCTCTGGACCTGTCCAGTGAGTTCCTCAGCCTGCAGGACAGCGGCGGGAGGCGGCCCAGATTGCGCCGAGCCGGGAGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS GCA 90 bp | GAGGACTCGTCCGTGTTTCCAGGCTCCGTGTGCTCTGCATGTGTGTaGTGGCTGTCTTCTGTGTCGCTCCTGCTTGAACTGTTCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EDSSVFPGSVCSACV*WLSSVSLLLELFIA Trigger: TGCTATGAACAGTTCAAGCAGGAGCGACACAGAAGACAGCCAGCACACACATGCAGAGCACACGGAGCCTGGAAACACGGACGAGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 90 bp | TTCTTGTTCTTCAAGCCGTTTAACTTCCTCTGCTGTCAGTGGTCTTaGTTCAGGCGGTGGTGCGACTGGGAGCACCTCCAAGGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFFKPFNFLCCQWS*FRRWCDWEHLQGLQ Trigger: CTGCAGGCCTTGGAGGTGCTCCCAGTCGCACCACCGCCTGAACCAAGACCACTGACAGCAGAGGAAGTTAAACGGCTTGAAGAACAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 90 bp | GACTCGTCCGTGTTTCCAGGCTCCGTGTGCTCTGCATGTGTGTGCTaGCTGTCTTCTGTGTCGCTCCTGCTTGAACTGTTCATAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSVFPGSVCSACVC*LSSVSLLLELFIAF Trigger: GAATGCTATGAACAGTTCAAGCAGGAGCGACACAGAAGACAGCCAGCACACACATGCAGAGCACACGGAGCCTGGAAACACGGACGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 90 bp | ATATTTGTTAACTGCTTGTGGTCCAGCACAAGTGAGGGTGTCGGCTaGGAGAGGATGGCCAGAGCCTGCTCCATACTGATGAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFVNCLWSSTSEGVG*ERMARACSILMSSC Trigger: GCAGGAGCTCATCAGTATGGAGCAGGCTCTGGCCATCCTCTCTCAGCCGACACCCTCACTTGTGCTGGACCACAAGCAGTTAACAAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 90 bp | ATCTTCTTCTTGTTCTTCAAGCCGTTTAACTTCCTCTGCTGTCAGTaGTCTTGGTTCAGGCGGTGGTGCGACTGGGAGCACCTCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IFFLFFKPFNFLCCQ*SWFRRWCDWEHLQG Trigger: GCCTTGGAGGTGCTCCCAGTCGCACCACCGCCTGAACCAAGACCACTGACAGCAGAGGAAGTTAAACGGCTTGAAGAACAAGAAGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 90 bp | CAGATTCTCCTACCCATTTACTCAGGCAGTCAGCACCTTTCCTCATaGAGAACGCCACTCTCTTATCCCCTCGGCTGCACTCATTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QILLPIYSGSQHLSS*RTPLSYPLGCTHWQ Trigger: TTGCCAATGAGTGCAGCCGAGGGGATAAGAGAGTGGCGTTCTTCATGAGGAAAGGTGCTGACTGCCTGAGTAAATGGGTAGGAGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 90 bp | GATGGCATGCCTTCGCCTGCTCATTCGTTTACAATAGGGACTTCTTaGTCCCGTAGAAGACAAGCGGAATCTTGGTCTTGCAGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGMPSPAHSFTIGTS*SRRRQAESWSCRRS Trigger: GCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGAAGTCCCTATTGTAAACGAATGAGCAGGCGAAGGCATGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS TCA 90 bp | ATTTTGCAGAAGTGGTTTCACAATGGCAGACAGTGCCTGTCCGGGTaGTGTCACAGCTCTCTGGGAAGCTGGTCTTATTTTCTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILQKWFHNGRQCLSG*CHSSLGSWSYFLQS Trigger: GCTCTGCAGAAAATAAGACCAGCTTCCCAGAGAGCTGTGACATCACCCGGACAGGCACTGTCTGCCATTGTGAAACCACTTCTGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS GCA 90 bp | TCTGAATGTATCTTCTTCTTGTTCTTCAAGCCGTTTAACTTCCTCTaGTGTCAGTGGTCTTGGTTCAGGCGGTGGTGCGACTGGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SECIFFLFFKPFNFL*CQWSWFRRWCDWEH Trigger: GTGCTCCCAGTCGCACCACCGCCTGAACCAAGACCACTGACAGCAGAGGAAGTTAAACGGCTTGAAGAACAAGAAGAAGATACATTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 90 bp | TGGTCCCGTAGAAGACAAGCGGAATCTTGGTCTTGCAGGAGAAGCTaGGCCACTATAAAACATGTTGGGCTTTCTCTGGTGACGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WSRRRQAESWSCRRS*ATIKHVGLSLVTRF Trigger: AAACCTCGTCACCAGAGAAAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 90 bp | ATGGCCAGAGCCTGCTCCATACTGATGAGCTCCTGCTGCTCTACCTaGGAACCTCTAGCTAGAGTCATCCGCAGAAAATCCATTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MARACSILMSSCCST*EPLARVIRRKSISF Trigger: AAAAGAAATGGATTTTCTGCGGATGACTCTAGCTAGAGGTTCCCAGGTAGAGCAGCAGGAGCTCATCAGTATGGAGCAGGCTCTGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCAGCGGAATCTTGGTCTaGCAGGAGAAGCTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVSGILV*QEKLGH Trigger: GTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCT...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS GCA 90 bp | ATAGGGACTTCTTGGTCCCGTAGAAGACAAGCGGAATCTTGGTCTTaGAGGAGAAGCTGGGCCACTATAAAACATGTTGGGCTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGTSWSRRRQAESWS*RRSWATIKHVGLSL Trigger: CAGAGAAAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGAAGTCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 90 bp | GGAATCTTGGTCTTGCAGGAGAAGCTGGGCCACTATAAAACATGTTaGGCTTTCTCTGGTGACGAGGTTTACTTTCCAGTGGAGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GILVLQEKLGHYKTC*AFSGDEVYFPVETG Trigger: ACCAGTCTCCACTGGAAAGTAAACCTCGTCACCAGAGAAAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | CACGCCACAGGAGTGCACGGTACCTTTAGCTTCTCATTCTGCTCTTaGTCTGGCTTTTTATCACCAACAGGAGGAGAATTTTGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HATGVHGTFSFSFCS*SGFLSPTGGEFCFG Trigger: GCCAAAGCAAAATTCTCCTCCTGTTGGTGATAAAAAGCCAGATCAAGAGCAGAATGAGAAGCTAAAGGTACCGTGCACTCCTGTGGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAACTGTGAATCTGATCTaGCCTGCTAGATCGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVHWALGLILTTITTTVNLI*PARSYW Trigger: CCAGTACGATCTAGCAGGCAAGATCAGATTCACAGT...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 90 bp | TTTACAATAGGGACTTCTTGGTCCCGTAGAAGACAAGCGGAATCTTaGTCTTGCAGGAGAAGCTGGGCCACTATAAAACATGTTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FTIGTSWSRRRQAES*SCRRSWATIKHVGL Trigger: AAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGAAGTCCCTATTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 90 bp | AAAGTAAGGGAAACACCACCATCTCTTTTAGAGCTGCAATGTGACTaGACAGGCCGCCAACACTGTCAAAGCGCACTGAAGTATCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KVRETPPSLLELQCD*TGRQHCQSALKYLV Trigger: AACTAGATACTTCAGTGCGCTTTGACAGTGTTGGCGGCCTGTCCAGTCACATTGCAGCTCTAAAAGAGATGGTGGTGTTTCCCTTACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 90 bp | GGCTTTGAGTGTCGGTCCAACTATTTCCCACCACAAATGGATATGTaGGACATAGACTATGCTGGGTGCTGTTCTCTTAGCTTCACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GFECRSNYFPPQMDM*DIDYAGCCSLSFTN Trigger: ATTCGTGAAGCTAAGAGAACAGCACCCAGCATAGTCTATGTCCCACATATCCATTTGTGGTGGGAAATAGTTGGACCGACACTCAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS GCA 90 bp | AACAGGAGGAGAATTTTGCTTTGGCATGACGTGGTAATAAGATGGTaGGTATTTGGAGGAGCTACAACCTCTCTTCTTCCGAGATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NRRRILLWHDVVIRW*VFGGATTSLLPRFL Trigger: CAGGAATCTCGGAAGAAGAGAGGTTGTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 90 bp | ACCAACAGGAGGAGAATTTTGCTTTGGCATGACGTGGTAATAAGATaGTGCGTATTTGGAGGAGCTACAACCTCTCTTCTTCCGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TNRRRILLWHDVVIR*CVFGGATTSLLPRF Trigger: GAATCTCGGAAGAAGAGAGGTTGTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACATTCAACATCTCCACTTaGTTCGTGCAAATGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVHWALGLILTTITTFNIST*FVQMFC Trigger: GCAGAACATTTGCACGAACAAAGTGGAGATGTTGAA...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACACAACATCAGCAAGGCTaGCTCCAATTTTCATTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVHWALGLILTTITTQHQQG*LQFSFD Trigger: ATCGAATGAAAATTGGAGCAAGCCTTGCTGATGTTG...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | GATCTGGCTTTTTATCACCAACAGGAGGAGAATTTTGCTTTGGCATaGCGTGGTAATAAGATGGTGCGTATTTGGAGGAGCTACAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLAFYHQQEENFALA*RGNKMVRIWRSYNL Trigger: GAGGTTGTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTTGGTGATAAAAAGCCAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 90 bp | TCCACACTGCCGTCCTGGTTATCAGTTGTTTCTTCATCAGCTCGCTaGATAGCCTTTAGTTTTCCTCTTGTGTACATAGTGAGATTACTC | + |
|
Preference number: 5 (lower is better) Translates to: STLPSWLSVVSSSAR*IAFSFPLVYIVRLL Trigger: GAGTAATCTCACTATGTACACAAGAGGAAAACTAAAGGCTATCCAGCGAGCTGATGAAGAAACAACTGATAACCAGGACGGCAGTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAAAGTATCTAGTTGCATaGGGTCAACATCAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: THAVPKAEVSTSHYGRSKKYLVA*GQHQQG Trigger: GCCTTGCTGATGTTGACCCAATGCAACTAGATACTT...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTCCTCGGCTGCACTCATaGGCAAGTGCTCTAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PNYYYCSSASLKHLRLISPRLHS*ASALAT Trigger: GGTTGCTAGAGCACTTGCCAATGAGTGCAGCCGAGG...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCATGGGTAAACAATTCTaGTACCTCTTCCGGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVMGKQF*YLFRQS Trigger: GCTTTGCCGGAAGAGGTACAAGAATTGTTTACCCAT...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | ACTTCCACATGTGGAAATACTTTCTGTAGGGCGTCTAAGATCCTATaGACAGTATTTTGCAGAAGTGGTTTCACAATGGCAGACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTCGNTFCRASKIL*TVFCRSGFTMADSA Trigger: GGCACTGTCTGCCATTGTGAAACCACTTCTGCAAAATACTGTTCATAGGATCTTAGACGCCCTACAGAAAGTATTTCCACATGTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 90 bp | CTCTTGATCTGGCTTTTTATCACCAACAGGAGGAGAATTTTGCTTTaGCATGACGTGGTAATAAGATGGTGCGTATTTGGAGGAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LLIWLFITNRRRILL*HDVVIRWCVFGGAT Trigger: TGTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTTGGTGATAAAAAGCCAGATCAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | ACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAAGTGAAATGTCTGCCATaGGAGTATTTCTCTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: THAVPKAEVSTSHYGRSKVKCLP*EYFSVL Trigger: CAGAACAGAGAAATACTCCAATGGCAGACATTTCAC...TTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCATGTCATCCATCTTTaGAAGTACAGCTTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVHVIHL*KYSFSS Trigger: ACTGCTGAAGCTGTACTTCAAAAGATGGATGACATG...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCGTTGTAAATGTGGCTTaGAGTGTCGGTCCAACTATT | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVVVNVA*SVGPTI Trigger: AATAGTTGGACCGACACTCAAAGCCACATTTACAAC...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAGAATGTATCTTCTTCTaGTTCTTCAAGCCGTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVHWALGLILTTITTECIFF*FFKPFN Trigger: GTTAAACGGCTTGAAGAACAAGAAGAAGATACATTC...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCTTCTCATTCTGCTCTaGATCTGGCTTTTTATCACC | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVLLILL*IWLFIT Trigger: GGTGATAAAAAGCCAGATCAAGAGCAGAATGAGAAG...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTAAGTGTACACTGGGCCCTAGGTCTGATCCTTACCACCATCACTACAGCTTTCAAGTCTATTTaGCTTGTCACTTTCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVHWALGLILTTITTAFKSI*LVTFFY Trigger: GTAGAAGAAAGTGACAAGCAAAATAGACTTGAAAGC...TGTAGTGATGGTGGTAAGGATCAGACCTAGGGCCCAGTGTACACTTAAGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCTCAAGTCTATTTTGCTaGTCACTTTCTTCTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVSSLFC*SLSSTE Trigger: CTCGGTAGAAGAAAGTGACAAGCAAAATAGACTTGA...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS GCA 90 bp | CTAATCCTGCAACTTCTTCGAACTTCAACATCTCCACTTTGTTCGTaGAAATGTTCTGCAGTTGGAGCAATGTTTCTATTCCTCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LILQLLRTSTSPLCS*KCSAVGAMFLFLNE Trigger: CTCATTGAGGAATAGAAACATTGCTCCAACTGCAGAACATTTGCACGAACAAAGTGGAGATGTTGAAGTTCGAAGAAGTTGCAGGATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 90 bp | ATAAAACATGTTGGGCTTTCTCTGGTGACGAGGTTTACTTTCCAGTaGAGACTGGTAGTAAACCGTTGTTTTTCTCTGCCTAAGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKHVGLSLVTRFTFQ*RLVVNRCFSLPKIV Trigger: TACTATCTTAGGCAGAGAAAAACAACGGTTTACTACCAGTCTCCACTGGAAAGTAAACCTCGTCACCAGAGAAAGCCCAACATGTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTAAGACAAGCGGAATCTaGGTCTTGCAGGAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNYYYCSSASLKHLRLISKTSGI*VLQEKL Trigger: CAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTT...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCCCTATGAACAGTATTTaGCAGAAGTGGTTTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVPMNSI*QKWFHN Trigger: ATTGTGAAACCACTTCTGCAAAATACTGTTCATAGG...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCATATTTGTTAACTGCTaGTGGTCCAGCACAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFRKQKFQRPIMEEANDFIFVNC*WSSTSE Trigger: CTCACTTGTGCTGGACCACAAGCAGTTAACAAATAT...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAACAAGCTTTCCAACACACGCTGTTCCGAAAGCAGAAGTTTCAACGTCTATGATCTGGAACAATaGAAGTTTTCTACTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSNKLSNTRCSESRSFNVYDLEQ*KFSTAC Trigger: GCAAGCAGTAGAAAACTTCAATTGTTCCAGATCATA...GACGTTGAAACTTCTGCTTTCGGAACAGCGTGTGTTGGAAAGCTTGTTTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | TTCTTCATCCGCTGTCTGCGCATCTTTTTCATGTCATCCATCTTTTaGAGTACAGCTTCAGCAGTGTTTGTTATAAGCTTGTCAAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFIRCLRIFFMSSIF*STASAVFVISLSNS Trigger: GCTATTTGACAAGCTTATAACAAACACTGCTGAAGCTGTACTTCAAAAGATGGATGACATGAAAAAGATGCGCAGACAGCGGATGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | GCGCTGTTTTGTCATAGTCCCTGCGGTGCTCATAAATACACTGGCTaGTTACTGCATACAAATTCTCCAGTTGGAATATATTATATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALFCHSPCGAHKYTG*LLHTNSPVGIYYIS Trigger: AGAAATATAATATATTCCAACTGGAGAATTTGTATGCAGTAATCAGCCAGTGTATTTATGAGCACCGCAGGGACTATGACAAAACAGCGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCGAAAGCAGAAGTTTCAACGTCCCATTATGGAAGAAGCAAATGATTTCTATTTCGGTTCCTTTTaGTTCTCCTCTCAAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFRKQKFQRPIMEEANDFYFGSF*FSSQNS Trigger: ACTGTTTTGAGAGGAGAACAAAAAGGAACCGAAATA...GAAATCATTTGCTTCTTCCATAATGGGACGTTGAAACTTCTGCTTTCGGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTGTTCTGTCCACGTTCTaGTCAAAACTAGACTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PNYYYCSSASLKHLRLISVLSTF*SKLDSE Trigger: TTCAGAGTCTAGTTTTGACAAGAACGTGGACAGAAC...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGACATGTCCACTGGCTTaGGATTCCAATCTCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EIPDPYTLDLYNIISINMTCPLA*DSNLLY Trigger: ATACAAGAGATTGGAATCCAAAGCCAGTGGACATGT...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS TCA 90 bp | TCTTCTAGAAACATGTCCACTGGCTTTGGATTCCAATCTCTTGTATaGATCTTCAGAATCTCTTTTCGAGCATTTTTATCAGGTAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SSRNMSTGFGFQSLV*IFRISFRAFLSGRL Trigger: TAGTCTACCTGATAAAAATGCTCGAAAAGAGATTCTGAAGATTCATACAAGAGATTGGAATCCAAAGCCAGTGGACATGTTTCTAGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | GAGATCCCAGATCCATACACACTAGACCTATACAATATTATCTCTATCAATATGGAAGTTTTCTACTGCTaGCTCCATTTTCTGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: EIPDPYTLDLYNIISINMEVFYC*LHFLNK Trigger: CTTGTTCAGAAAATGGAGCAAGCAGTAGAAAACTTC...CATATTGATAGAGATAATATTGTATAGGTCTAGTGTGTATGGATCTGGGATCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS GCA 90 bp | TTTGTCATAGTCCCTGCGGTGCTCATAAATACACTGGCTGATTACTaGATACAAATTCTCCAGTTGGAATATATTATATTTCTGACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVIVPAVLINTLADY*IQILQLEYIIFLTF Trigger: AAAAGTCAGAAATATAATATATTCCAACTGGAGAATTTGTATGCAGTAATCAGCCAGTGTATTTATGAGCACCGCAGGGACTATGACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTTGCCTACATGCCACTTaGACTTTTTATGGAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNYYYCSSASLKHLRLISCLHAT*TFYGIF Trigger: GAAAATTCCATAAAAAGTCAAAGTGGCATGTAGGCA...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS-3UTR CAA 90 bp | CCAAACTATTACTATTGTAGCAGTGCTTCACTCAAACATCTAAGACTTATCAGTGAAAATCCATTTCTTTaGATTCACTGTCTTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PNYYYCSSASLKHLRLISENPFL*IHCLRE Trigger: TTCCCGAAGACAGTGAATCAAAAGAAATGGATTTTC...ACTGATAAGTCTTAGATGTTTGAGTGAAGCACTGCTACAATAGTAATAGTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS GCA 72 bp | GCTCGGCGCAATCTGGGCCGCCTCCCGCCGCTGTCCTaGAGGCTGAGGAACTCACTGGACAGGTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARRNLGRLPPLS*RLRNSLDRSRE Trigger: CTCTCTGGACCTGTCCAGTGAGTTCCTCAGCCTGCAGGACAGCGGCGGGAGGCGGCCCAGATTGCGCCGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 72 bp | TGGACAGGTCCAGAGAGTCGGTGGCCGAGGAGGTGGTaGAGCGACTGTGCAGCTCCAGGCTGCTGCGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WTGPESRWPRRW*SDCAAPGCCGG Trigger: TCCTCCGCAGCAGCCTGGAGCTGCACAGTCGCTCCACCACCTCCTCGGCCACCGACTCTCTGGACCTGTCCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS CCA 72 bp | CACTGGACAGGTCCAGAGAGTCGGTGGCCGAGGAGGTaGTGGAGCGACTGTGCAGCTCCAGGCTGCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HWTGPESRWPRR*WSDCAAPGCCG Trigger: TCCGCAGCAGCCTGGAGCTGCACAGTCGCTCCACCACCTCCTCGGCCACCGACTCTCTGGACCTGTCCAGTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
||
| CDS GCA 72 bp | TCTACCGAGGACTCGTCCGTGTTTCCAGGCTCCGTGTaGTCTGCATGTGTGTGCTGGCTGTCTTCTGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: STEDSSVFPGSV*SACVCWLSSVS Trigger: CGACACAGAAGACAGCCAGCACACACATGCAGAGCACACGGAGCCTGGAAACACGGACGAGTCCTCGGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 72 bp | TTCAAGCCGTTTAACTTCCTCTGCTGTCAGTGGTCTTaGTTCAGGCGGTGGTGCGACTGGGAGCACCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FKPFNFLCCQWS*FRRWCDWEHLQ Trigger: TTGGAGGTGCTCCCAGTCGCACCACCGCCTGAACCAAGACCACTGACAGCAGAGGAAGTTAAACGGCTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 72 bp | TTGTTCTTCAAGCCGTTTAACTTCCTCTGCTGTCAGTaGTCTTGGTTCAGGCGGTGGTGCGACTGGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFFKPFNFLCCQ*SWFRRWCDWEH Trigger: GTGCTCCCAGTCGCACCACCGCCTGAACCAAGACCACTGACAGCAGAGGAAGTTAAACGGCTTGAAGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
||
| CDS CCA 72 bp | GCCTGCTCCATACTGATGAGCTCCTGCTGCTCTACCTaGGAACCTCTAGCTAGAGTCATCCGCAGAAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: ACSILMSSCCST*EPLARVIRRKS Trigger: GGATTTTCTGCGGATGACTCTAGCTAGAGGTTCCCAGGTAGAGCAGCAGGAGCTCATCAGTATGGAGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | CTACCCATTTACTCAGGCAGTCAGCACCTTTCCTCATaGAGAACGCCACTCTCTTATCCCCTCGGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: LPIYSGSQHLSS*RTPLSYPLGCT Trigger: AGTGCAGCCGAGGGGATAAGAGAGTGGCGTTCTTCATGAGGAAAGGTGCTGACTGCCTGAGTAAATGGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | TCGACGCAGGGCGCACAAAGCAGCTTCAGCACAGATTaGCTTAATATCCGCACCACAGTAGCCAACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: STQGAQSSFSTD*LNIRTTVANTV Trigger: CACTGTGTTGGCTACTGTGGTGCGGATATTAAGTCAATCTGTGCTGAAGCTGCTTTGTGCGCCCTGCGTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | TTCCTCATGAAGAACGCCACTCTCTTATCCCCTCGGCTGCACTCATaGGCAAGTGCTCTAGCAACCAGGGTTTTTCCAGTTCCAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FLMKNATLLSPRLHS*ASALATRVFPVPGG Trigger: ACCACCTGGAACTGGAAAAACCCTGGTTGCTAGAGCACTTGCCAATGAGTGCAGCCGAGGGGATAAGAGAGTGGCGTTCTTCATGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | AAGGGAAACACCACCATCTCTTTTAGAGCTGCAATGTaGCTGGACAGGCCGCCAACACTGTCAAAGCGCACT | + |
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Preference number: 6 (lower is better) Translates to: KGNTTISFRAAM*LDRPPTLSKRT Trigger: AGTGCGCTTTGACAGTGTTGGCGGCCTGTCCAGTCACATTGCAGCTCTAAAAGAGATGGTGGTGTTTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 72 bp | GAAACACCACCATCTCTTTTAGAGCTGCAATGTGACTaGACAGGCCGCCAACACTGTCAAAGCGCACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ETPPSLLELQCD*TGRQHCQSALK Trigger: CTTCAGTGCGCTTTGACAGTGTTGGCGGCCTGTCCAGTCACATTGCAGCTCTAAAAGAGATGGTGGTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 72 bp | AAGAACGCCACTCTCTTATCCCCTCGGCTGCACTCATaGGCAAGTGCTCTAGCAACCAGGGTTTTTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KNATLLSPRLHS*ASALATRVFPV Trigger: AACTGGAAAAACCCTGGTTGCTAGAGCACTTGCCAATGAGTGCAGCCGAGGGGATAAGAGAGTGGCGTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | AAGTGGTTTCACAATGGCAGACAGTGCCTGTCCGGGTaGTGTCACAGCTCTCTGGGAAGCTGGTCTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: KWFHNGRQCLSG*CHSSLGSWSYF Trigger: AAAATAAGACCAGCTTCCCAGAGAGCTGTGACATCACCCGGACAGGCACTGTCTGCCATTGTGAAACCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS GCA 72 bp | TCTTGGTCCCGTAGAAGACAAGCGGAATCTTGGTCTTaGAGGAGAAGCTGGGCCACTATAAAACATGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SWSRRRQAESWS*RRSWATIKHVG Trigger: CCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS GCA 72 bp | TTTTCAACTGAGCAGGTGTGCTGCACGCCACAGGAGTaGACGGTACCTTTAGCTTCTCATTCTGCTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FSTEQVCCTPQE*TVPLASHSALD Trigger: ATCAAGAGCAGAATGAGAAGCTAAAGGTACCGTGCACTCCTGTGGCGTGCAGCACACCTGCTCAGTTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 72 bp | GGGACTTCTTGGTCCCGTAGAAGACAAGCGGAATCTTaGTCTTGCAGGAGAAGCTGGGCCACTATAAAACAT | + |
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Preference number: 6 (lower is better) Translates to: GTSWSRRRQAES*SCRRSWATIKH Trigger: ATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGAAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 72 bp | CCTTCGCCTGCTCATTCGTTTACAATAGGGACTTCTTaGTCCCGTAGAAGACAAGCGGAATCTTGGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PSPAHSFTIGTS*SRRRQAESWSC Trigger: GCAAGACCAAGATTCCGCTTGTCTTCTACGGGACCAAGAAGTCCCTATTGTAAACGAATGAGCAGGCGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 72 bp | TCTTCCCCCTCTTCAGATGATTCCACACTGCCGTCCTaGTTATCAGTTGTTTCTTCATCAGCTCGCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: SSPSSDDSTLPS*LSVVSSSARWI Trigger: TATCCAGCGAGCTGATGAAGAAACAACTGATAACCAGGACGGCAGTGTGGAATCATCTGAAGAGGGGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 72 bp | GTCTTGCAGGAGAAGCTGGGCCACTATAAAACATGTTaGGCTTTCTCTGGTGACGAGGTTTACTTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VLQEKLGHYKTC*AFSGDEVYFPV Trigger: CACTGGAAAGTAAACCTCGTCACCAGAGAAAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 72 bp | AGAAGACAAGCGGAATCTTGGTCTTGCAGGAGAAGCTaGGCCACTATAAAACATGTTGGGCTTTCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRQAESWSCRRS*ATIKHVGLSLV Trigger: CACCAGAGAAAGCCCAACATGTTTTATAGTGGCCCAGCTTCTCCTGCAAGACCAAGATTCCGCTTGTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS TCA 72 bp | AATTTTTCCAAAGCATGGATGACAGCTGGTGCCAAGTaGGAACTCTGTCCAAATCCTGGTTCTCCCACTATC | + |
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Preference number: 6 (lower is better) Translates to: NFSKAWMTAGAK*ELCPNPGSPTI Trigger: GATAGTGGGAGAACCAGGATTTGGACAGAGTTCTCACTTGGCACCAGCTGTCATCCATGCTTTGGAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 72 bp | ATGCTGGGTGCTGTTCTCTTAGCTTCACGAATCATTTaGGAACATGCCTCTTCAGGAGATGTTGTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: MLGAVLLASRII*EHASSGDVVLM Trigger: CATCAGTACAACATCTCCTGAAGAGGCATGTTCCCAAATGATTCGTGAAGCTAAGAGAACAGCACCCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | GACATAGACTATGCTGGGTGCTGTTCTCTTAGCTTCACGAATCATTaGGGAACATGCCTCTTCAGGAGATGTTGTACTGATGCCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: DIDYAGCCSLSFTNH*GTCLFRRCCTDAKK Trigger: CTTTTTGGCATCAGTACAACATCTCCTGAAGAGGCATGTTCCCAAATGATTCGTGAAGCTAAGAGAACAGCACCCAGCATAGTCTATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | GGAGTGCACGGTACCTTTAGCTTCTCATTCTGCTCTTaGTCTGGCTTTTTATCACCAACAGGAGGAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GVHGTFSFSFCS*SGFLSPTGGEF Trigger: AAATTCTCCTCCTGTTGGTGATAAAAAGCCAGATCAAGAGCAGAATGAGAAGCTAAAGGTACCGTGCACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 72 bp | CCGTCCTGGTTATCAGTTGTTTCTTCATCAGCTCGCTaGATAGCCTTTAGTTTTCCTCTTGTGTACATAGTG | + |
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Preference number: 6 (lower is better) Translates to: PSWLSVVSSSAR*IAFSFPLVYIV Trigger: CACTATGTACACAAGAGGAAAACTAAAGGCTATCCAGCGAGCTGATGAAGAAACAACTGATAACCAGGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 72 bp | TGCTGTCGAGCAAATTGCCTTGTGAAATGTCTGCCATaGGAGTATTTCTCTGTTCTGTCCACGTTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CCRANCLVKCLP*EYFSVLSTFLS Trigger: TGACAAGAACGTGGACAGAACAGAGAAATACTCCAATGGCAGACATTTCACAAGGCAATTTGCTCGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 72 bp | TATGCTGGGTGCTGTTCTCTTAGCTTCACGAATCATTaGGGAACATGCCTCTTCAGGAGATGTTGTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: YAGCCSLSFTNH*GTCLFRRCCTD Trigger: ATCAGTACAACATCTCCTGAAGAGGCATGTTCCCAAATGATTCGTGAAGCTAAGAGAACAGCACCCAGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | TTATCAGCCTGCTGTCGAGCAAATTGCCTTGTGAAATGTCTGCCATaGGAGTATTTCTCTGTTCTGTCCACGTTCTTGTCAAAACTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSACCRANCLVKCLP*EYFSVLSTFLSKLD Trigger: GTCTAGTTTTGACAAGAACGTGGACAGAACAGAGAAATACTCCAATGGCAGACATTTCACAAGGCAATTTGCTCGACAGCAGGCTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS TCA 72 bp | TTTTATCACCAACAGGAGGAGAATTTTGCTTTGGCATaGCGTGGTAATAAGATGGTGCGTATTTGGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FYHQQEENFALA*RGNKMVRIWRS Trigger: GCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTTGGTGATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CCA 72 bp | TTCTTGTCAAAACTAGACTCTGAAGAAGTTTGTGCTTaGTTTCTCAGAGACCTTAAAGAGCGCGTGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: FLSKLDSEEVCA*FLRDLKERVLW Trigger: CCACAACACGCGCTCTTTAAGGTCTCTGAGAAACCAAGCACAAACTTCTTCAGAGTCTAGTTTTGACAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CCA 72 bp | AGGAGAATTTTGCTTTGGCATGACGTGGTAATAAGATaGTGCGTATTTGGAGGAGCTACAACCTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RRILLWHDVVIR*CVFGGATTSLL Trigger: AAGAAGAGAGGTTGTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 72 bp | CTGCCATTGGAGTATTTCTCTGTTCTGTCCACGTTCTaGTCAAAACTAGACTCTGAAGAAGTTTGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LPLEYFSVLSTF*SKLDSEEVCAW Trigger: CCAAGCACAAACTTCTTCAGAGTCTAGTTTTGACAAGAACGTGGACAGAACAGAGAAATACTCCAATGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 90 bp | ATTCTGCTCTTGATCTGGCTTTTTATCACCAACAGGAGGAGAATTTaGCTTTGGCATGACGTGGTAATAAGATGGTGCGTATTTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ILLLIWLFITNRRRI*LWHDVVIRWCVFGG Trigger: TCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAAAATTCTCCTCCTGTTGGTGATAAAAAGCCAGATCAAGAGCAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | GTGAAATGTCTGCCATTGGAGTATTTCTCTGTTCTGTCCACGTTCTaGTCAAAACTAGACTCTGAAGAAGTTTGTGCTTGGTTTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VKCLPLEYFSVLSTF*SKLDSEEVCAWFLR Trigger: TCTGAGAAACCAAGCACAAACTTCTTCAGAGTCTAGTTTTGACAAGAACGTGGACAGAACAGAGAAATACTCCAATGGCAGACATTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 90 bp | ACGACTTCTAATCCTGCAACTTCTTCGAACTTCAACATCTCCACTTaGTTCGTGCAAATGTTCTGCAGTTGGAGCAATGTTTCTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: TTSNPATSSNFNIST*FVQMFCSWSNVSIP Trigger: AGGAATAGAAACATTGCTCCAACTGCAGAACATTTGCACGAACAAAGTGGAGATGTTGAAGTTCGAAGAAGTTGCAGGATTAGAAGTCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 90 bp | GGAGCAAATGAAGGTATAGTCTGTAATAATGTTGTAAATGTGGCTTaGAGTGTCGGTCCAACTATTTCCCACCACAAATGGATATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GANEGIVCNNVVNVA*SVGPTISHHKWICG Trigger: CCCACATATCCATTTGTGGTGGGAAATAGTTGGACCGACACTCAAAGCCACATTTACAACATTATTACAGACTATACCTTCATTTGCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | TCTTCTGTGTCGCTCCTGCTTGAACTGTTCATAGCATTCAAGCTGTaGTCTTTAGCTTGTGAAATTTTCCTTCGCTTTATTTTGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSVSLLLELFIAFKL*SLACEIFLRFILVP Trigger: AGGCACCAAAATAAAGCGAAGGAAAATTTCACAAGCTAAAGACAACAGCTTGAATGCTATGAACAGTTCAAGCAGGAGCGACACAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | CAACACAGTGTTCTGCTAGTTCTTCTAGAAACATGTCCACTGGCTTaGGATTCCAATCTCTTGTATGAATCTTCAGAATCTCTTTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: QHSVLLVLLETCPLA*DSNLLYESSESLFE Trigger: CTCGAAAAGAGATTCTGAAGATTCATACAAGAGATTGGAATCCAAAGCCAGTGGACATGTTTCTAGAAGAACTAGCAGAACACTGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | TGTGGAAATACTTTCTGTAGGGCGTCTAAGATCCTATaGACAGTATTTTGCAGAAGTGGTTTCACAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: CGNTFCRASKIL*TVFCRSGFTMA Trigger: TGCCATTGTGAAACCACTTCTGCAAAATACTGTTCATAGGATCTTAGACGCCCTACAGAAAGTATTTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS TCA 72 bp | TGTCATAGTCCCTGCGGTGCTCATAAATACACTGGCTaGTTACTGCATACAAATTCTCCAGTTGGAATATAT | + |
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Preference number: 6 (lower is better) Translates to: CHSPCGAHKYTG*LLHTNSPVGIY Trigger: ATATATTCCAACTGGAGAATTTGTATGCAGTAATCAGCCAGTGTATTTATGAGCACCGCAGGGACTATGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS GCA 72 bp | CAACTTCTTCGAACTTCAACATCTCCACTTTGTTCGTaGAAATGTTCTGCAGTTGGAGCAATGTTTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: QLLRTSTSPLCS*KCSAVGAMFLF Trigger: GAATAGAAACATTGCTCCAACTGCAGAACATTTGCACGAACAAAGTGGAGATGTTGAAGTTCGAAGAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038194.5 |
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| CDS CAA 72 bp | GAAGGTATAGTCTGTAATAATGTTGTAAATGTGGCTTaGAGTGTCGGTCCAACTATTTCCCACCACAAATGG | + |
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Preference number: 6 (lower is better) Translates to: EGIVCNNVVNVA*SVGPTISHHKW Trigger: CCATTTGTGGTGGGAAATAGTTGGACCGACACTCAAAGCCACATTTACAACATTATTACAGACTATACCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 72 bp | GTTCTGCTAGTTCTTCTAGAAACATGTCCACTGGCTTaGGATTCCAATCTCTTGTATGAATCTTCAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: VLLVLLETCPLA*DSNLLYESSES Trigger: AGATTCTGAAGATTCATACAAGAGATTGGAATCCAAAGCCAGTGGACATGTTTCTAGAAGAACTAGCAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 72 bp | CTAGAAACATGTCCACTGGCTTTGGATTCCAATCTCTaGTATGAATCTTCAGAATCTCTTTTCGAGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: LETCPLALDSNL*YESSESLFEHF Trigger: AAAATGCTCGAAAAGAGATTCTGAAGATTCATACAAGAGATTGGAATCCAAAGCCAGTGGACATGTTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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| CDS CAA 90 bp | CTAGTTCTTCTAGAAACATGTCCACTGGCTTTGGATTCCAATCTCTaGTATGAATCTTCAGAATCTCTTTTCGAGCATTTTTATCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LVLLETCPLALDSNL*YESSESLFEHFYQV Trigger: TACCTGATAAAAATGCTCGAAAAGAGATTCTGAAGATTCATACAAGAGATTGGAATCCAAAGCCAGTGGACATGTTTCTAGAAGAACTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038194.5 ENSMUST00000228783.2 |
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