Pregenerated sensors for ATAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013662Ensembl transcript IDs: ENSMUST00000070210.6, ENSMUST00000235142.2, ENSMUST00000235412.2, ENSMUST00000236011.2, ENSMUST00000236701.2, ENSMUST00000236985.2, ENSMUST00000237752.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTAGAGATGACAGAAATGGCTTAGAGACTGAGACACAGTTGGGCTaGCAAGATACACATGTTACATACAGTATAGAGAATGCCGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PRDDRNGLETETQLG*QDTHVTYSIENAVS Trigger: ACTGACGGCATTCTCTATACTGTATGTAACATGTGTATCTTGTCAGCCCAACTGTGTCTCAGTCTCTAAGCCATTTCTGTCATCTCTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| 3UTR TCA 90 bp | GAAGAAAGACCTTTGGAAGGTAGATTTCTGATGATGTTAACATGCTaGAATAGCTGGAATTATACATGGGCAGTACACACATGGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: EERPLEGRFLMMLTC*NSWNYTWAVHTWDA Trigger: TGCATCCCATGTGTGTACTGCCCATGTATAATTCCAGCTATTTCAGCATGTTAACATCATCAGAAATCTACCTTCCAAAGGTCTTTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| 3UTR CCA 90 bp | ATAATTAAATGCATCGATATAACAGGTTGGCAAGTCAGGGTTACATaGTATGAAAACTTCAGAGCAAGAGAAGAGTTGGCAAACTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: IIKCIDITGWQVRVT*YENFRAREELANSF Trigger: AAAGGAGTTTGCCAACTCTTCTCTTGCTCTGAAGTTTTCATACCATGTAACCCTGACTTGCCAACCTGTTATATCGATGCATTTAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| 3UTR-3UTR TCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAAACAGAGCAAAGATCTaGGAATATGACCCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EYDPSLDFPHCCADGSTGNRAKI*EYDPSL Trigger: CAGGCTTGGGTCATATTCTCAGATCTTTGCTCTGTT...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR CCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAGGCTATAACAGCATATaGCTAAAAAGGTCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: EYDPSLDFPHCCADGSTGGYNSI*LKRSDK Trigger: CTTGTCTGACCTTTTTAGCCATATGCTGTTATAGCC...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCAACACCTAGGAATGGCTaGATCTCCCTGGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPTPRNG*ISLDLS Trigger: TGACAGGTCCAGGGAGATTCAGCCATTCCTAGGTGT...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | GGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGCACAAATGATCCTCATTTCATCTTCATCGTaGCTCTCTTCTGATGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFPSLLCRREHWTAQMILISSSS*LSSDVE Trigger: TTCTACATCAGAAGAGAGTCACGATGAAGATGAAAT...GAGGATCATTTGTGCTGTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236701.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCACTTAGGACTGTGCTGTaGCACTGTACTCTAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPLRTVL*HCTLVL Trigger: CAGAACTAGAGTACAGTGCCACAGCACAGTCCTAAG...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCAAACAGAGCAAAGATCTaGGAATATGACCCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPNRAKI*EYDPSL Trigger: CAGGCTTGGGTCATATTCTCAGATCTTTGCTCTGTT...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGTAGCAGCCCTGTCCACACTGCTCCACACACTTTTGTTATGTATGAAGTTCACTCAACATCAGCCTaGATGCACACAGATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LSSSPVHTAPHTFVMYEVHSTSA*MHTDEH Trigger: ATGCTCATCTGTGTGCATGCAGGCTGATGTTGAGTG...AACTTCATACATAACAAAAGTGTGTGGAGCAGTGTGGACAGGGCTGCTACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGACACCTAGGAATGGCTaGATCTCCCTGGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: NKTNNKTRRRLISLVTQRTPRNG*ISLDLS Trigger: TGACAGGTCCAGGGAGATTCAGCCATTCCTAGGTGT...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTAGGCTATAACAGCATATaGCTAAAAAGGTCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLGYNSI*LKRSDK Trigger: CTTGTCTGACCTTTTTAGCCATATGCTGTTATAGCC...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGACACCTAGGAATGGCTaGATCTCCCTGGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQTPRNG*ISLDLS Trigger: TGACAGGTCCAGGGAGATTCAGCCATTCCTAGGTGT...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAACACCTAGGAATGGCTaGATCTCCCTGGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RVLYVVHIASSDYRYNTRTPRNG*ISLDLS Trigger: TGACAGGTCCAGGGAGATTCAGCCATTCCTAGGTGT...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCATCACATAGCATCAAGTaGCTACAGATACAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPSHSIK*LQIQHK Trigger: CTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGA...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTAATCGTGACTCTCTTCTaGTGTAGAATTGACATATTC | + |
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Preference number: 2 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLIVTLF*CRIDIF Trigger: GAATATGTCAATTCTACATCAGAAGAGAGTCACGAT...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236701.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCACTTAAATCCCAGTTTTaGTACAGACTATCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPLKSQF*YRLSGA Trigger: AGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAG...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCACTCTTACACAAGCAGCTGACCCTCCAGACACTGTCATCTTGAATCAATCATCTTTACAATCTTaGCCAGCTTGCTTTTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: PLTLTQAADPPDTVILNQSSLQS*PACFLL Trigger: TAACAAAAAGCAAGCTGGGCAAGATTGTAAAGATGA...TTGATTCAAGATGACAGTGTCTGGAGGGTCAGCTGCTTGTGTAAGAGTGAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGTAGCAGCCCTGTCCACACTGCTCCACACACTTTTGTTATGTATGAAGTTCAACATCAGCCTGCATaGACACAGATGAGCATATAT | + |
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Preference number: 2 (lower is better) Translates to: LSSSPVHTAPHTFVMYEVQHQPA*TQMSIY Trigger: ATATATGCTCATCTGTGTGCATGCAGGCTGATGTTG...AACTTCATACATAACAAAAGTGTGTGGAGCAGTGTGGACAGGGCTGCTACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCAGGCTATAACAGCATATaGCTAAAAAGGTCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: LPSLLFVILSSLPQSITPGYNSI*LKRSDK Trigger: CTTGTCTGACCTTTTTAGCCATATGCTGTTATAGCC...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR CAA 90 bp | CCTCTCACTCTTACACAAGCAGCTGACCCTCCAGACACTGTCATCTaGAATCAAACCCGTAAATTACAGATGTTAAATAATCCTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: PLTLTQAADPPDTVI*NQTRKLQMLNNPGL Trigger: TAAACCAGGATTATTTAACATCTGTAATTTACGGGTTTGATTCAAGATGACAGTGTCTGGAGGGTCAGCTGCTTGTGTAAGAGTGAGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAATAGCTGGAATTATACATGGGCAGTACACACATGGGATGCATCTCTCACTCATCAAAAGTGTTTaGCAGATACCAGAAATTGAG | + |
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Preference number: 2 (lower is better) Translates to: AEIAGIIHGQYTHGMHLSLIKSV*QIPEIE Trigger: CTCAATTTCTGGTATCTGTCAAACACTTTTGATGAG...TGAGAGATGCATCCCATGTGTGTACTGCCCATGTATAATTCCAGCTATTTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCTCAAGCAGAATGGAAATTACAAACACTCAAAAGCTGCCTAAGTTATATCTTAGGACTGTGCTGTaGCACTGTACTCTAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLSSRMEITNTQKLPKLYLRTVL*HCTLVL Trigger: CAGAACTAGAGTACAGTGCCACAGCACAGTCCTAAG...ATATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCTCAAGCAGAATGGAAATTACAAACACTCAAAAGCTGCCTAAGTTATATATCCCTGCTGATCACTaGGCAAACTGTGTTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PLSSRMEITNTQKLPKLYIPADH*ANCVCH Trigger: ATGACAAACACAGTTTGCTCAGTGATCAGCAGGGAT...ATATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATCTTAAATCCCAGTTTTaGTACAGACTATCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SNPALNPSFATDYLVLLDLKSQF*YRLSGA Trigger: AGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAG...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATGGCTATAACAGCATATaGCTAAAAAGGTCAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: SNPALNPSFATDYLVLLDGYNSI*LKRSDK Trigger: CTTGTCTGACCTTTTTAGCCATATGCTGTTATAGCC...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTCTTAGGACTGTGCTGTaGCACTGTACTCTAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KNRICFLASCISIHFPSSLRTVL*HCTLVL Trigger: CAGAACTAGAGTACAGTGCCACAGCACAGTCCTAAG...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAACAGAGCAAAGATCTaGGAATATGACCCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQNRAKI*EYDPSL Trigger: CAGGCTTGGGTCATATTCTCAGATCTTTGCTCTGTT...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAAACAGAGCAAAGATCTaGGAATATGACCCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RVLYVVHIASSDYRYNTRNRAKI*EYDPSL Trigger: CAGGCTTGGGTCATATTCTCAGATCTTTGCTCTGTT...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTAACAGAGCAAAGATCTaGGAATATGACCCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KNRICFLASCISIHFPSSNRAKI*EYDPSL Trigger: CAGGCTTGGGTCATATTCTCAGATCTTTGCTCTGTT...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGATCCCTGCTGATCACTaGGCAAACTGTGTTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQIPADH*ANCVCH Trigger: ATGACAAACACAGTTTGCTCAGTGATCAGCAGGGAT...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTATCCCTGCTGATCACTaGGCAAACTGTGTTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: KNRICFLASCISIHFPSSIPADH*ANCVCH Trigger: ATGACAAACACAGTTTGCTCAGTGATCAGCAGGGAT...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGGGACCTGTCAAATCCTaGCTTAAATCCCAGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQGPVKS*LKSQFC Trigger: GCAAAACTGGGATTTAAGGCAGGATTTGACAGGTCC...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGCGTATTAAAGAGGACTaGGGTTTCTTAAACCCATTC | + |
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Preference number: 2 (lower is better) Translates to: NKTNNKTRRRLISLVTQRRIKED*GFLNPF Trigger: GAATGGGTTTAAGAAACCTCAGTCCTCTTTAATACG...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGCTTAAATCCCAGTTTTaGTACAGACTATCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: NKTNNKTRRRLISLVTQRLKSQF*YRLSGA Trigger: AGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAG...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGACGTATTAAAGAGGACTaGGGTTTCTTAAACCCATTC | + |
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Preference number: 2 (lower is better) Translates to: RVLYVVHIASSDYRYNTRRIKED*GFLNPF Trigger: GAATGGGTTTAAGAAACCTCAGTCCTCTTTAATACG...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGCGTATTAAAGAGGACTaGGGTTTCTTAAACCCATTC | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQRIKED*GFLNPF Trigger: GAATGGGTTTAAGAAACCTCAGTCCTCTTTAATACG...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGCTTAAATCCCAGTTTTaGTACAGACTATCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RNKTNNKTRRRLISLVTQLKSQF*YRLSGA Trigger: AGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAG...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAGGCTATAACAGCATATaGCTAAAAAGGTCAGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RVLYVVHIASSDYRYNTRGYNSI*LKRSDK Trigger: CTTGTCTGACCTTTTTAGCCATATGCTGTTATAGCC...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR CCA 72 bp | ACATGGGCAGTACACACATGGGATGCATCTCTCACATaGGGCAGGAGGAAGCAGTATGGTGCTACTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TWAVHTWDASLT*GRRKQYGATVW Trigger: CCAGACAGTAGCACCATACTGCTTCCTCCTGCCCCATGTGAGAGATGCATCCCATGTGTGTACTGCCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| 3UTR GCA 72 bp | TGCATCTCTCACATGGGGCAGGAGGAAGCAGTATGGTaGTACTGTCTGGCAGGGACCTCGTACAAAAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CISHMGQEEAVW*YCLAGTSYKSE Trigger: TTCACTTTTGTACGAGGTCCCTGCCAGACAGTAGCACCATACTGCTTCCTCCTGCCCCATGTGAGAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| 3UTR TCA 72 bp | CCAATGAGAGGCTCCTCTCACTCTTACACAAGCAGCTaGCCCTCCAGACACTGTCATCTTGAATCAAACCCG | + |
|
Preference number: 3 (lower is better) Translates to: PMRGSSHSYTSS*PSRHCHLESNP Trigger: CGGGTTTGATTCAAGATGACAGTGTCTGGAGGGTCAGCTGCTTGTGTAAGAGTGAGAGGAGCCTCTCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR CCA 72 bp | TCTCTGGTGACTCAGAGGCACCTTAGGACTGTGCTGTaGCACTGTACTCTAGTTCTGTCACATGTCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVTQRHLRTVL*HCTLVLSHVKV Trigger: CACCTTGACATGTGACAGAACTAGAGTACAGTGCCACAGCACAGTCCTAAGGTGCCTCTGAGTCACCAGAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR TCA 72 bp | CGGTGTCACAGCAGGATGAGGTGGAATAATCCCTGCTaGTCACTGAGCAAACTGTGTTTGTCATCTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RCHSRMRWNNPC*SLSKLCLSSDS Trigger: AGAATCAGATGACAAACACAGTTTGCTCAGTGATCAGCAGGGATTATTCCACCTCATCCTGCTGTGACACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR GCA 72 bp | GCACTGTCCCAACTCCTTAAAAGTAGGTGCCACAGTTaGCTCATAGATCAGAACAGAAACGAAGCAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALSQLLKSRCHS*LIDQNRNEAAN Trigger: ATTTGCTGCTTCGTTTCTGTTCTGATCTATGAGGCAACTGTGGCACCTACTTTTAAGGAGTTGGGACAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCACTGAGCAAACTGTGTTaGTCATCTGATTCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSLLFVILSSLPQSITPLSKLC*SSDSPD Trigger: GTCAGGAGAATCAGATGACAAACACAGTTTGCTCAG...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR TCA 72 bp | GAGGAGACATCAAACCAATCAGAAGTCATCCAACAGTaGGAGTCAGAGAACCATCGCATGGCTTTTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: EETSNQSEVIQQ*ESENHRMAFSS Trigger: AGATGAAAAAGCCATGCGATGGTTCTCTGACTCTCACTGTTGGATGACTTCTGATTGGTTTGATGTCTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR TCA 72 bp | ATGGTGCTACTGTCTGGCAGGGACCTCGTACAAAAGTaGATGAGTTTTAACAGAAGCTTACTATGGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: MVLLSGRDLVQK*MSFNRSLLWHS Trigger: TGAGTGCCATAGTAAGCTTCTGTTAAAACTCATTCACTTTTGTACGAGGTCCCTGCCAGACAGTAGCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| 3UTR TCA 72 bp | CGATATAACAGGTTGGCAAGTCAGGGTTACATGGTATaGAAACTTCAGAGCAAGAGAAGAGTTGGCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: RYNRLASQGYMV*KLQSKRRVGKL Trigger: GAGTTTGCCAACTCTTCTCTTGCTCTGAAGTTTTCATACCATGTAACCCTGACTTGCCAACCTGTTATATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATCTGAGCAAACTGTGTTaGTCATCTGATTCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SNPALNPSFATDYLVLLDLSKLC*SSDSPD Trigger: GTCAGGAGAATCAGATGACAAACACAGTTTGCTCAG...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGCTGAGCAAACTGTGTTaGTCATCTGATTCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NKTNNKTRRRLISLVTQRLSKLC*SSDSPD Trigger: GTCAGGAGAATCAGATGACAAACACAGTTTGCTCAG...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR TCA 72 bp | GACAGAAATGGCTTAGAGACTGAGACACAGTTGGGCTaGCAAGATACACATGTTACATACAGTATAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: DRNGLETETQLG*QDTHVTYSIEN Trigger: ATTCTCTATACTGTATGTAACATGTGTATCTTGTCAGCCCAACTGTGTCTCAGTCTCTAAGCCATTTCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTCTGAGCAAACTGTGTTaGTCATCTGATTCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KNRICFLASCISIHFPSSLSKLC*SSDSPD Trigger: GTCAGGAGAATCAGATGACAAACACAGTTTGCTCAG...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR TCA 72 bp | AGCTGCCTAAGTTATATGGAAATAGTTTCTCTGACTTaGTGGCTTAATATGCCTACAGGAGTCATGGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLSYMEIVSLT*WLNMPTGVMVV Trigger: AACAACCATGACTCCTGTAGGCATATTAAGCCATCAAGTCAGAGAAACTATTTCCATATAACTTAGGCAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR TCA 72 bp | GCAAACGCTTTAAAACCTAACAGCCAACCACATATGTaGAATGCCTCTCTCAAGCAGAATGGAAATTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ANALKPNSQPHM*NASLKQNGNYK Trigger: TTTGTAATTTCCATTCTGCTTGAGAGAGGCATTTCACATATGTGGTTGGCTGTTAGGTTTTAAAGCGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR CCA 72 bp | CCAACCACATATGTGAAATGCCTCTCTCAAGCAGAATaGAAATTACAAACACTCAAAAGCTGCCTAAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PTTYVKCLSQAE*KLQTLKSCLSY Trigger: ATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGGCATTTCACATATGTGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| CDS-3UTR TCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGTAAGGCACTCAACATCAGCCTGCATGCACACAGATGAGCATATATCCGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVVRHSTSACMHTDEHISAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...GGATATATGCTCATCTGTGTGCATGCAGGCTGATGTTGAGTGCCTTACCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR TCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGATTTTCCGCCTGTTTCTaGGCTTCTACCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGFSACF*ASTFCF Trigger: GAAGCAGAAGGTAGAAGCTCAGAAACAGGCGGAAAA...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACTTTTCCGCCTGTTTCTaGGCTTCTACCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDFSACF*ASTFCF Trigger: GAAGCAGAAGGTAGAAGCTCAGAAACAGGCGGAAAA...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACAAGGGCTGGGGAGTAGCTCAAGAGGTAAAGCACTTGCTAGGCCACCATTTTTCCGCCTGTTTCTaGGCTTCTACCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNKGWGVAQEVKHLLGHHFSACF*ASTFCF Trigger: GAAGCAGAAGGTAGAAGCTCAGAAACAGGCGGAAAA...ATGGTGGCCTAGCAAGTGCTTTACCTCTTGAGCTACTCCCCAGCCCTTGTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTAGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | CGGCAACAAGGGCTGGGGAGTAGCTCAAGAGGTAAAGCACTTGCTAGGCCACCAAGAGGGTCTACTAGATaGGCAGCAATACTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQQGLGSSSRGKALARPPRGSTR*AAILIS Trigger: TGAAATGAGTATTGCTGCTCATCTAGTAGACCCTCT...TGGTGGCCTAGCAAGTGCTTTACCTCTTGAGCTACTCCCCAGCCCTTGTTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR CCA 90 bp | GGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGCACAAATGATCCTCTTCATTCCGACTCAATaGACGAGAAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPSLLCRREHWTAQMILFIPTQ*TRKGFS Trigger: GCTGAAGCCTTTTCTCGTCCATTGAGTCGGAATGAA...GAGGATCATTTGTGCTGTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACTTCATTCCGACTCAATaGACGAGAAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDFIPTQ*TRKGFS Trigger: GCTGAAGCCTTTTCTCGTCCATTGAGTCGGAATGAA...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAGTTACCAATGGACAGTaGCTCATTCAAGTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGVTNGQ*LIQVAL Trigger: CAGTGCTACTTGAATGAGCCACTGTCCATTGGTAAC...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236701.2 |
||
| CDS-3UTR TCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAAGAGGGTCTACTAGATaGGCAGCAATACTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGRGSTR*AAILIS Trigger: TGAAATGAGTATTGCTGCTCATCTAGTAGACCCTCT...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGAGGGTCTACTAGATaGGCAGCAATACTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDRGSTR*AAILIS Trigger: TGAAATGAGTATTGCTGCTCATCTAGTAGACCCTCT...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | CGGCAACAAGGGCTGGGGAGTAGCTCAAGAGGTAAAGCACTTGCTAGGCCACCACTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQQGLGSSSRGKALARPPLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...TGGTGGCCTAGCAAGTGCTTTACCTCTTGAGCTACTCCCCAGCCCTTGTTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR GCA 90 bp | CGGCAACAAGGGCTGGGGAGTAGCTCAAGAGGTAAAGCACTTGCTAGGCCACCATCACTCCAAGTAACATaGATATTAAGAGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: RQQGLGSSSRGKALARPPSLQVT*ILRGST Trigger: AGTAGACCCTCTTAATATGCATGTTACTTGGAGTGA...TGGTGGCCTAGCAAGTGCTTTACCTCTTGAGCTACTCCCCAGCCCTTGTTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCACTCTTACACAAGCAGCTGACCCTCCAGACACTGTCATCTTGAATCAACTACCTTCTGCTTCCTaGTGGGGTCAATGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLTQAADPPDTVILNQLPSAS*WGQWHL Trigger: TAGATGCCATTGACCCCACCAGGAAGCAGAAGGTAG...TTGATTCAAGATGACAGTGTCTGGAGGGTCAGCTGCTTGTGTAAGAGTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTATGGTGCAGCTTCGGGAGAAAGGCCTTTTCAGAATCTTTCTCAAAGGCTACCTTCTGCTTCCTaGTGGGGTCAATGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VWYGAASGERPFQNLSQRLPSAS*WGQWHL Trigger: TAGATGCCATTGACCCCACCAGGAAGCAGAAGGTAG...CCTTTGAGAAAGATTCTGAAAAGGCCTTTCTCCCGAAGCTGCACCATACCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR CCA 90 bp | GGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGCACAAATGATCCTCCTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPSLLCRREHWTAQMILLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...GAGGATCATTTGTGCTGTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYDPSLDFPHCCADGSTGLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACATCGTGACTCTCTTCTaGTGTAGAATTGACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDIVTLF*CRIDIF Trigger: GAATATGTCAATTCTACATCAGAAGAGAGTCACGAT...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACATTTCATCTTCATCGTaGCTCTCTTCTGATGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NMTQAWISLTAVQTGALDISSSS*LSSDVE Trigger: TTCTACATCAGAAGAGAGTCACGATGAAGATGAAAT...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236985.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGCACAAATGATCCTCTCACTCCAAGTAACATaGATATTAAGAGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GFPSLLCRREHWTAQMILSLQVT*ILRGST Trigger: AGTAGACCCTCTTAATATGCATGTTACTTGGAGTGA...GAGGATCATTTGTGCTGTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGGTAAGGCACTCAACATCAGCCTGCATGCACACAGATGAGCATATATCCCTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVVRHSTSACMHTDEHISLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...GGATATATGCTCATCTGTGTGCATGCAGGCTGATGTTGAGTGCCTTACCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTGCGGAGTCAAGGTCTTaGGGGCGATTGGTAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRICFLASCISIHFPSSAESRS*GRLVAP Trigger: GGGAGCTACCAATCGCCCTCAAGACCTTGACTCCGC...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCATTCATTCCGACTCAATaGACGAGAAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLFVILSSLPQSITPFIPTQ*TRKGFS Trigger: GCTGAAGCCTTTTCTCGTCCATTGAGTCGGAATGAA...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATCTACCTTCTGCTTCCTaGTGGGGTCAATGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDLPSAS*WGQWHL Trigger: TAGATGCCATTGACCCCACCAGGAAGCAGAAGGTAG...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCACTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLFVILSSLPQSITPLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTACTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATTTCATTCCGACTCAATaGACGAGAAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDFIPTQ*TRKGFS Trigger: GCTGAAGCCTTTTCTCGTCCATTGAGTCGGAATGAA...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAGCTTGCTTTTTGTTATCCTAAGTAGTCTCCCGCAATCTATAACCCCACTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLFVILSSLPQSITPLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...TGGGGTTATAGATTGCGGGAGACTACTTAGGATAACAAAAAGCAAGCTGGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATCTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGTTTTCCGCCTGTTTCTaGGCTTCTACCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTNNKTRRRLISLVTQRFSACF*ASTFCF Trigger: GAAGCAGAAGGTAGAAGCTCAGAAACAGGCGGAAAA...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTCTACCTTCTGCTTCCTaGTGGGGTCAATGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KNRICFLASCISIHFPSSLPSAS*WGQWHL Trigger: TAGATGCCATTGACCCCACCAGGAAGCAGAAGGTAG...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGACTACCTTCTGCTTCCTaGTGGGGTCAATGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRLPSAS*WGQWHL Trigger: TAGATGCCATTGACCCCACCAGGAAGCAGAAGGTAG...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTTTTTCCGCCTGTTTCTaGGCTTCTACCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNRICFLASCISIHFPSSFSACF*ASTFCF Trigger: GAAGCAGAAGGTAGAAGCTCAGAAACAGGCGGAAAA...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATATCGTGACTCTCTTCTaGTGTAGAATTGACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDIVTLF*CRIDIF Trigger: GAATATGTCAATTCTACATCAGAAGAGAGTCACGAT...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236985.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATTCACTCCAAGTAACATaGATATTAAGAGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SNPALNPSFATDYLVLLDSLQVT*ILRGST Trigger: AGTAGACCCTCTTAATATGCATGTTACTTGGAGTGA...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGTTCATTCCGACTCAATaGACGAGAAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNKTNNKTRRRLISLVTQFIPTQ*TRKGFS Trigger: GCTGAAGCCTTTTCTCGTCCATTGAGTCGGAATGAA...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTCTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNRICFLASCISIHFPSSLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGACTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGCTTCGTGGTCAGAACTaGAACGATTTCGTAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNKTNNKTRRRLISLVTQLRGQN*NDFVGK Trigger: CTTTCCTACGAAATCGTTCCAGTTCTGACCACGAAG...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| 3UTR CAA 72 bp | CTTACACAAGCAGCTGACCCTCCAGACACTGTCATCTaGAATCAAACCCGTAAATTACAGATGTTAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTQAADPPDTVI*NQTRKLQMLNN Trigger: ATTATTTAACATCTGTAATTTACGGGTTTGATTCAAGATGACAGTGTCTGGAGGGTCAGCTGCTTGTGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| 3UTR CAA 72 bp | GTTACATGGTATGAAAACTTCAGAGCAAGAGAAGAGTaGGCAAACTCCTTTAACATGACCTCAAAGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: VTWYENFRAREE*ANSFNMTSKVY Trigger: GTATACCTTTGAGGTCATGTTAAAGGAGTTTGCCAACTCTTCTCTTGCTCTGAAGTTTTCATACCATGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAAGAGGGTCTACTAGATaGGCAGCAATACTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRRGSTR*AAILIS Trigger: TGAAATGAGTATTGCTGCTCATCTAGTAGACCCTCT...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGCTTTGGCTGTTGCTTTaGCAATTAATGTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTNNKTRRRLISLVTQRLWLLL*QLMFSH Trigger: GTGGGAAAACATTAATTGCCAAAGCAACAGCCAAAG...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGAGGATCGTGACTCTCTTCTaGTGTAGAATTGACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTNNKTRRRLISLVTQRIVTLF*CRIDIF Trigger: GAATATGTCAATTCTACATCAGAAGAGAGTCACGAT...CCTCTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236985.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCTCAAGCAGAATGGAAATTACAAACACTCAAAAGCTGCCTAAGTTATATATTTCATCTTCATCGTaGCTCTCTTCTGATGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSSRMEITNTQKLPKLYISSSS*LSSDVE Trigger: TTCTACATCAGAAGAGAGTCACGATGAAGATGAAAT...ATATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCAAGCAGAATGGAAATTACAAACACTCAAAAGCTGCCTAAGTTATATTCACTCCAAGTAACATaGATATTAAGAGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSSRMEITNTQKLPKLYSLQVT*ILRGST Trigger: AGTAGACCCTCTTAATATGCATGTTACTTGGAGTGA...ATATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAATTTCATCTTCATCGTaGCTCTCTTCTGATGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRISSSS*LSSDVE Trigger: TTCTACATCAGAAGAGAGTCACGATGAAGATGAAAT...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236985.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGATCACTCCAAGTAACATaGATATTAAGAGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: RVLYVVHIASSDYRYNTRSLQVT*ILRGST Trigger: AGTAGACCCTCTTAATATGCATGTTACTTGGAGTGA...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070210.6 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | GAATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGAAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EYDPSLDFPHCCADGSTGSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...TCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | AATATGACCCAAGCCTGGATTTCCCTCACTGCTGTGCAGACGGGAGCACTGGACAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NMTQAWISLTAVQTGALDSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...GTCCAGTGCTCCCGTCTGCACAGCAGTGAGGGAAATCCAGGCTTGGGTCATATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTAAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | ATTCATACTCACGTGTCTAGAAACCAGCACCTAACCACACCCCATTCCTCACTAACAGAAGAACACCTTTaGGAGGCTGCAGTAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHTHVSRNQHLTTPHSSLTEEHL*EAAVVW Trigger: CCAGACTACTGCAGCCTCCAAAAGGTGTTCTTCTGT...TAGTGAGGAATGGGGTGTGGTTAGGTGCTGGTTTCTAGACACGTGAGTATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | TCAAATCCTGCCTTAAATCCCAGTTTTGCTACAGACTATCTGGTGCTTTTGGATACAGAAGAACACCTTTaGGAGGCTGCAGTAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SNPALNPSFATDYLVLLDTEEHL*EAAVVW Trigger: CCAGACTACTGCAGCCTCCAAAAGGTGTTCTTCTGT...ATCCAAAAGCACCAGATAGTCTGTAGCAAAACTGGGATTTAAGGCAGGATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTTATATGTGGTTCACATAGCATCAAGTGACTACAGATACAACACAAGAAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVLYVVHIASSDYRYNTRSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...TCTTGTGTTGTATCTGTAGTCACTTGATGCTATGTGAACCACATATAAAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNRICFLASCISIHFPSSSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTTTTCAGAATCTTTCTCAAAGGAGTTAATTCAGGGCTAACTTACTTTAGCGGAGTCAAGGTCTaGAGGGCGATTGGTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: KGLFRIFLKGVNSGLTYFSGVKV*RAIGSS Trigger: GGAGCTACCAATCGCCCTCAAGACCTTGACTCCGCT...AAAGTAAGTTAGCCCTGAATTAACTCCTTTGAGAAAGATTCTGAAAAGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237752.2 |
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| CDS-3UTR CAA 90 bp | CCTCTCTCAAGCAGAATGGAAATTACAAACACTCAAAAGCTGCCTAAGTTATATACAGAAGAACACCTTTaGGAGGCTGCAGTAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLSSRMEITNTQKLPKLYTEEHL*EAAVVW Trigger: CCAGACTACTGCAGCCTCCAAAAGGTGTTCTTCTGT...ATATAACTTAGGCAGCTTTTGAGTGTTTGTAATTTCCATTCTGCTTGAGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235412.2 |
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| CDS-3UTR CAA 90 bp | AGAAATAAAACAAATAATAAAACCCGTCGTCGTTTAATCTCTCTGGTGACTCAGACAGAAGAACACCTTTaGGAGGCTGCAGTAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RNKTNNKTRRRLISLVTQTEEHL*EAAVVW Trigger: CCAGACTACTGCAGCCTCCAAAAGGTGTTCTTCTGT...CTGAGTCACCAGAGAGATTAAACGACGACGGGTTTTATTATTTGTTTTATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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| CDS-3UTR CAA 90 bp | AAAAACAGGATATGTTTCTTGGCGTCTTGTATTAGCATTCATTTCCCATCATCTACAGAAGAACACCTTTaGGAGGCTGCAGTAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KNRICFLASCISIHFPSSTEEHL*EAAVVW Trigger: CCAGACTACTGCAGCCTCCAAAAGGTGTTCTTCTGT...AGATGATGGGAAATGAATGCTAATACAAGACGCCAAGAAACATATCCTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000070210.6 ENSMUST00000235142.2 ENSMUST00000235412.2 ENSMUST00000236011.2 ENSMUST00000236701.2 ENSMUST00000236985.2 |
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