Pregenerated sensors for ASZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010796Ensembl transcript IDs: ENSMUST00000010940.11, ENSMUST00000136194.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGTGGCCAACAGTTTACAAATGGTCTCTTCTTTGGTTAGCTGCTaGAGTTTTCCTTCCAATGGATTTAGAGTCAGAGAAAGAAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: SVANSLQMVSSLVSC*SFPSNGFRVRERKL Trigger: CAACTTTCTTTCTCTGACTCTAAATCCATTGGAAGGAAAACTTCAGCAGCTAACCAAAGAAGAGACCATTTGTAAACTGTTGGCCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAAGAATTACATTTTTATaGCCCTGCCGTGCTGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LFAISLGVLPSLVCSILLRITFL*PCRAAH Trigger: ATGGGCAGCACGGCAGGGTCATAAAAATGTAATTCT...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| 3UTR TCA 72 bp | TACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATaGTTAGAAGCCATGCTAGGACACTCAGAAGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: YRQGNKAMLYHK*LEAMLGHSEED Trigger: ATCTTCTTCTGAGTGTCCTAGCATGGCTTCTAATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGCCTCCACCAGCCACTaGCAAGCCCCTCAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDASTSH*QAPQCA Trigger: GGCACACTGAGGGGCTTGGCAGTGGCTGGTGGAGGC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAGCCTCCACCAGCCACTaGCAAGCCCCTCAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LFAISLGVLPSLVCSILLASTSH*QAPQCA Trigger: GGCACACTGAGGGGCTTGGCAGTGGCTGGTGGAGGC...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGAAGCGAACCAGCTCTaGATTGGCCACACTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDEANQL*IGHTSG Trigger: GCCGCTAGTGTGGCCAATGCAGAGCTGGTTCGCTTC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATCAAGACTTGCTCCTCTaGGCCACGAGCAGAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDQDLLL*ATSRTS Trigger: GCTTGTTCTGCTCGTGGCTCAGAGGAGCAAGTCTTG...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTACAAGACTTGCTCCTCTaGGCCACGAGCAGAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFAISLGVLPSLVCSILLQDLLL*ATSRTS Trigger: GCTTGTTCTGCTCGTGGCTCAGAGGAGCAAGTCTTG...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATACACATTTCAAGACTTaGTCCTCTGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDTHFKT*SSEPRA Trigger: TGCTCGTGGCTCAGAGGAGCAAGTCTTGAAATGTGT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAACACATTTCAAGACTTaGTCCTCTGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFAISLGVLPSLVCSILLTHFKT*SSEPRA Trigger: TGCTCGTGGCTCAGAGGAGCAAGTCTTGAAATGTGT...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATTCTCGCTTGGTGTTCTaGCATCTTTGGTCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDSRLVF*HLWSVA Trigger: TGCTACAGACCAAAGATGGCAGAACACCAAGCGAGA...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATAGAATTACATTTTTATaGCCCTGCCGTGCTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDRITFL*PCRAAH Trigger: ATGGGCAGCACGGCAGGGTCATAAAAATGTAATTCT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATACACACTGTAACTGCTaGCCTCTTCAGAATTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDTHCNC*PLQNSS Trigger: ACTCGAATTCTGAAGAGGTCAGCAGTTACAGTGTGT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGGCAGCATACATGATTaGCGTCATAAGTCTCCTACA | + |
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Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDGSIHD*RHKSPT Trigger: TGTAGGAGACTTATGACGCCAATCATGTATGCTGCC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATTCATTCTGCATCTTCTaGATCAACTCCTTCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDSFCIF*INSFSL Trigger: CAGACTGAAGGAGTTGATTCAGAAGATGCAGAATGA...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATATCTCCGGTGGTCAGTaGTTTCTTAAATGTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDISGGQ*FLKCLV Trigger: AACGAGACATTTAAGAAAGCACTGACCACCGGAGAT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAATCTCCGGTGGTCAGTaGTTTCTTAAATGTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFAISLGVLPSLVCSILLISGGQ*FLKCLV Trigger: AACGAGACATTTAAGAAAGCACTGACCACCGGAGAT...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGCTCGTCTTTCTTCATaGTCAGAAGGTGTCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDARLSS*SEGVLK Trigger: CTTTAAGACACCTTCTGACCATGAAGAAAGACGAGC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR TCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGCCAAGATTTTCTGTTaGTCTTTACTAGCAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDAKIFC*SLLAIP Trigger: TGGAATTGCTAGTAAAGATCAACAGAAAATCTTGGC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATTCGGTAATGATATTCTaGACAGCTGTGATTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDSVMIF*TAVIKW Trigger: CCATTTAATCACAGCTGTGCAGAATATCATTACCGA...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATAAATGGTCTCTTCTTTaGTTAGCTGCTGAAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDKWSLL*LAAEVF Trigger: GAAAACTTCAGCAGCTAACCAAAGAAGAGACCATTT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATCTTTATCAGAATCTGTaGCCAACAGTTTACAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDLYQNL*PTVYKW Trigger: CCATTTGTAAACTGTTGGCCACAGATTCTGATAAAG...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATACAGCTGTGATTAAATaGCCACACTGCTTATTTAAT | + |
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Preference number: 4 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDTAVIK*PHCLFN Trigger: ATTAAATAAGCAGTGTGGCCATTTAATCACAGCTGT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| 3UTR CAA 72 bp | AGGAAAACTGTACTTTATAGTATCATAATTGTTCCTTaGGAGTACAGGCAAGGAAATAAAGCTATGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: RKTVLYSIIIVP*EYRQGNKAMLY Trigger: GTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAATTATGATACTATAAAGTACAGTTTTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS GCA 90 bp | AAAGCTGGCATTAGCACCTCTGTCCAAAAGGAAGCGAACCAGCTCTaGATTGGCCACACTAGCGGCATACATAAGAGGGGTCCATCCATA | + |
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Preference number: 5 (lower is better) Translates to: KAGISTSVQKEANQL*IGHTSGIHKRGPSI Trigger: TATGGATGGACCCCTCTTATGTATGCCGCTAGTGTGGCCAATGCAGAGCTGGTTCGCTTCCTTTTGGACAGAGGTGCTAATGCCAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS CCA 90 bp | CAGAGCCACAACCTGAGTATGACCGTCTCGGGCAGCATACATGATTaGCGTCATAAGTCTCCTACAAGCAGTATTTGGGTCCGCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: QSHNLSMTVSGSIHD*RHKSPTSSIWVRIS Trigger: AGAAATGCGGACCCAAATACTGCTTGTAGGAGACTTATGACGCCAATCATGTATGCTGCCCGAGACGGTCATACTCAGGTTGTGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS TCA 90 bp | CTTGCCGATGAAAAGCAGCAGCCCGAATCCACACACTGTAACTGCTaGCCTCTTCAGAATTCGAGTCTTCCATGTAGAGACCTCTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: LADEKQQPESTHCNC*PLQNSSLPCRDLFY Trigger: GTAGAAGAGGTCTCTACATGGAAGACTCGAATTCTGAAGAGGTCAGCAGTTACAGTGTGTGGATTCGGGCTGCTGCTTTTCATCGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATCGAACCAGCTCTGCATaGGCCACACTAGCGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDRTSSA*ATLAAY Trigger: GTATGCCGCTAGTGTGGCCAATGCAGAGCTGGTTCG...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTACGAACCAGCTCTGCATaGGCCACACTAGCGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: LFAISLGVLPSLVCSILLRTSSA*ATLAAY Trigger: GTATGCCGCTAGTGTGGCCAATGCAGAGCTGGTTCG...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS TCA 90 bp | AATGTCTCGTTCTTCTCTTCAACGGGTAAAGACCTTTTTAATTTCTaGGAGGACCGGTCGAGATACCCAATATCCCAGCCGTCATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: NVSFFSSTGKDLFNF*EDRSRYPISQPSSS Trigger: TGAGGATGACGGCTGGGATATTGGGTATCTCGACCGGTCCTCTCAGAAATTAAAAAGGTCTTTACCCGTTGAAGAGAAGAACGAGACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS GCA 90 bp | GGGTCCGCATTTCTTGAAAGTAGTAACTCTACACATTTCAAGACTTaGTCCTCTGAGCCACGAGCAGAACAAGCACTTATCAAAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: GSAFLESSNSTHFKT*SSEPRAEQALIKMV Trigger: AACCATTTTGATAAGTGCTTGTTCTGCTCGTGGCTCAGAGGAGCAAGTCTTGAAATGTGTAGAGTTACTACTTTCAAGAAATGCGGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATCTAGTGGGATATGAGTaGGGTCATTTTCCCGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDLVGYE*GHFPAH Trigger: ATGAGCGGGAAAATGACCCAACTCATATCCCACTAG...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAGCCTACAAGCAGTATTaGGGTCCGCATTTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LFAISLGVLPSLVCSILLAYKQY*GPHFLK Trigger: TTTCAAGAAATGCGGACCCAAATACTGCTTGTAGGC...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATTCCTACAAGCAGTATTaGGGTCCGCATTTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDSYKQY*GPHFLK Trigger: TTTCAAGAAATGCGGACCCAAATACTGCTTGTAGGA...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS CCA 90 bp | TGTGATCTTTTTCTTTATCAGAATCTGTGGCCAACAGTTTACAAATaGTCTCTTCTTTGGTTAGCTGCTGAAGTTTTCCTTCCAATGGAT | + |
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Preference number: 5 (lower is better) Translates to: CDLFLYQNLWPTVYK*SLLWLAAEVFLPMD Trigger: ATCCATTGGAAGGAAAACTTCAGCAGCTAACCAAAGAAGAGACCATTTGTAAACTGTTGGCCACAGATTCTGATAAAGAAAAAGATCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATATCAAAATGGTTAACTaGTCCTTATCAAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDIKMVN*SLSKLA Trigger: TGCCAGCTTTGATAAGGACAAGTTAACCATTTTGAT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCAATCTCGCTTGGTGTTCTGCCATCTTTGGTCTGTAGCATTTTATTAATCAAAATGGTTAACTaGTCCTTATCAAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFAISLGVLPSLVCSILLIKMVN*SLSKLA Trigger: TGCCAGCTTTGATAAGGACAAGTTAACCATTTTGAT...TAATAAAATGCTACAGACCAAAGATGGCAGAACACCAAGCGAGATTGCAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136194.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATGATGTTTATTTCTTTTaGCAATCTCGCTTGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDDVYFF*QSRLVF Trigger: GAACACCAAGCGAGATTGCAAAAAGAAATAAACATC...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTGGAGTACAGGCAAGGAAATAAAGCTATGCTGTACCACAAATGATAGCCAAGATTTTCTGTaGATCTTTACTAGCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: LFLWSTGKEIKLCCTTNDSQDFL*IFTSNS Trigger: GGAATTGCTAGTAAAGATCAACAGAAAATCTTGGCT...ATCATTTGTGGTACAGCATAGCTTTATTTCCTTGCCTGTACTCCAAAGGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS GCA 72 bp | GATACCCAATATCCCAGCCGTCATCCTCACTATCGCTaGTCTCGCCTCCACCAGCCACTGCCAAGCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: DTQYPSRHPHYR*SRLHQPLPSPS Trigger: TGAGGGGCTTGGCAGTGGCTGGTGGAGGCGAGAGCAGCGATAGTGAGGATGACGGCTGGGATATTGGGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS CAA 72 bp | GCACCTCTGTCCAAAAGGAAGCGAACCAGCTCTGCATaGGCCACACTAGCGGCATACATAAGAGGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: APLSKRKRTSSA*ATLAAYIRGVH Trigger: ATGGACCCCTCTTATGTATGCCGCTAGTGTGGCCAATGCAGAGCTGGTTCGCTTCCTTTTGGACAGAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS GCA 72 bp | ATTAGCACCTCTGTCCAAAAGGAAGCGAACCAGCTCTaGATTGGCCACACTAGCGGCATACATAAGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ISTSVQKEANQL*IGHTSGIHKRG Trigger: ACCCCTCTTATGTATGCCGCTAGTGTGGCCAATGCAGAGCTGGTTCGCTTCCTTTTGGACAGAGGTGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS CCA 72 bp | AACCTGAGTATGACCGTCTCGGGCAGCATACATGATTaGCGTCATAAGTCTCCTACAAGCAGTATTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: NLSMTVSGSIHD*RHKSPTSSIWV Trigger: GACCCAAATACTGCTTGTAGGAGACTTATGACGCCAATCATGTATGCTGCCCGAGACGGTCATACTCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS TCA 72 bp | TTCTTCTCTTCAACGGGTAAAGACCTTTTTAATTTCTaGGAGGACCGGTCGAGATACCCAATATCCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: FFSSTGKDLFNF*EDRSRYPISQP Trigger: CGGCTGGGATATTGGGTATCTCGACCGGTCCTCTCAGAAATTAAAAAGGTCTTTACCCGTTGAAGAGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS TCA 72 bp | GTCTTCCATGTAGAGACCTCTTCTACTAGTGGGATATaGGTTGGGTCATTTTCCCGCTCATTCTGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VFHVETSSTSGI*VGSFSRSFCIF Trigger: GAAGATGCAGAATGAGCGGGAAAATGACCCAACTCATATCCCACTAGTAGAAGAGGTCTCTACATGGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010940.11 |
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| CDS CAA 72 bp | CCACGAGCAGAACAAGCACTTATCAAAATGGTTAACTaGTCCTTATCAAAGCTGGCATTAGCACCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRAEQALIKMVN*SLSKLALAPLS Trigger: GGACAGAGGTGCTAATGCCAGCTTTGATAAGGACAAGTTAACCATTTTGATAAGTGCTTGTTCTGCTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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| CDS GCA 72 bp | TTTCTTGAAAGTAGTAACTCTACACATTTCAAGACTTaGTCCTCTGAGCCACGAGCAGAACAAGCACTTATC | + |
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Preference number: 6 (lower is better) Translates to: FLESSNSTHFKT*SSEPRAEQALI Trigger: GATAAGTGCTTGTTCTGCTCGTGGCTCAGAGGAGCAAGTCTTGAAATGTGTAGAGTTACTACTTTCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010940.11 ENSMUST00000136194.2 |
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