RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASXL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042548

Ensembl transcript IDs: ENSMUST00000109790.2, ENSMUST00000227428.2

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCAGATCCAGAAGCCTGTCTGGGGTCGTCCAAGGAACTCACCCATaGATCCAGAAGCACTTAACACTGGTGAGGACCACTTGTCACATA +
Preference number: 1 (lower is better)
Translates to: ARSRSLSGVVQGTHP*IQKHLTLVRTTCHI
Trigger: TATGTGACAAGTGGTCCTCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGACAGGCTTCTGGATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp CTCAGAGGTCTCAGAAGAGGACTGGACATGCTTGGCTCCTGCTCCTaGTCTTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGC +
Preference number: 1 (lower is better)
Translates to: LRGLRRGLDMLGSCS*SLVKRLLSTQHGLG
Trigger: GCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTCTTCTGAGACCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 90 bp ATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTaGCTCTCAAGGTCTACAGATGGCATTTCCATAAGCAGACAGCCC +
Preference number: 1 (lower is better)
Translates to: MGGWQAGVTCKHLYS*LSRSTDGISISRQP
Trigger: GGGCTGTCTGCTTATGGAAATGCCATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 90 bp AACTATCTGTGGCGCGCAGACTGTAGTAGAATCCCTGGTGACAGGTaGCTAGGCACAGGGCCAAGCATAGGTCACAAGTCAGTAACTTTC +
Preference number: 1 (lower is better)
Translates to: NYLWRADCSRIPGDR*LGTGPSIGHKSVTF
Trigger: GAAAGTTACTGACTTGTGACCTATGCTTGGCCCTGTGCCTAGTCACCTGTCACCAGGGATTCTACTACAGTCTGCGCGCCACAGATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp TCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTGGACATGCTTaGCTCCTGCTCCTGGTCTTTGGTAAAGAGACTTCTGAGCACACA +
Preference number: 1 (lower is better)
Translates to: SLLRPQRSQKRTGHA*LLLLVFGKETSEHT
Trigger: TGTGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 90 bp TCACATACACAGGTGTATGGGTGCCCACTCCCACAGAATCAAATATaGTGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACA +
Preference number: 1 (lower is better)
Translates to: SHTQVYGCPLPQNQI*WVGGKQESPANICT
Trigger: TGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATATTTGATTCTGTGGGAGTGGGCACCCATACACCTGTGTATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp CTCCTGCTCCTGGTCTTTGGTAAAGAGACTTCTGAGCACACAACATaGACTTGGCCAATACTGAATTCACTACCGGCTCCTCACTCATAC +
Preference number: 1 (lower is better)
Translates to: LLLLVFGKETSEHTT*TWPILNSLPAPHSY
Trigger: GTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp CTCCTGGTCTTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTaGCCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATG +
Preference number: 1 (lower is better)
Translates to: LLVFGKETSEHTTWT*PILNSLPAPHSYLM
Trigger: CATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp TTTGATCCCCTGGTGGGCAAAGACAGAATTTACTTTAACCCTGTGTaGCTTCTGCAACCATCAACTCCCAAGCTAAGTAGCAGAAGATGG +
Preference number: 1 (lower is better)
Translates to: FDPLVGKDRIYFNPV*LLQPSTPKLSSRRW
Trigger: CCATCTTCTGCTACTTAGCTTGGGAGTTGATGGTTGCAGAAGCCACACAGGGTTAAAGTAAATTCTGTCTTTGCCCACCAGGGGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp AGTCACCTGCAAACATCTGTACAGTTGACTCTCAAGGTCTACAGATaGCATTTCCATAAGCAGACAGCCCTATTTCCAGACCCCATTGTC +
Preference number: 1 (lower is better)
Translates to: SHLQTSVQLTLKVYR*HFHKQTALFPDPIV
Trigger: GACAATGGGGTCTGGAAATAGGGCTGTCTGCTTATGGAAATGCCATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTTGCAGGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp ACCCCATTGTCCAAGAAGGGCTATTCAAGCTCCCAAGAAAATCTGTaGATCCATGGGTTACAGATTAAAGTTCCAAACTGGGTGAAGCAC +
Preference number: 1 (lower is better)
Translates to: TPLSKKGYSSSQENL*IHGLQIKVPNWVKH
Trigger: GTGCTTCACCCAGTTTGGAACTTTAATCTGTAACCCATGGATCCACAGATTTTCTTGGGAGCTTGAATAGCCCTTCTTGGACAATGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp CAAGAAAATCTGTGGATCCATGGGTTACAGATTAAAGTTCCAAACTaGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTG +
Preference number: 1 (lower is better)
Translates to: QENLWIHGLQIKVPN*VKHQNQRSTWLHQL
Trigger: CAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTTTGGAACTTTAATCTGTAACCCATGGATCCACAGATTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 90 bp AGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTaGGAAGAGGTCAAATACAAAGGGTGTCTACTTGATGGAACCATG +
Preference number: 1 (lower is better)
Translates to: RTPNFQVKIQKQGRN*EEVKYKGCLLDGTM
Trigger: CATGGTTCCATCAAGTAGACACCCTTTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 90 bp TCAGTAACTTTCTTCTCACATAGGCAGCACAGCACTCAGTGGTTTTaGCAATTGGTGCACATAAGTAAACGACACCATTTTAATCAAGGG +
Preference number: 1 (lower is better)
Translates to: SVTFFSHRQHSTQWF*QLVHISKRHHFNQG
Trigger: CCCTTGATTAAAATGGTGTCGTTTACTTATGTGCACCAATTGTCAAAACCACTGAGTGCTGTGCTGCCTATGTGAGAAGAAAGTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 90 bp CAATTGGTGCACATAAGTAAACGACACCATTTTAATCAAGGGTGCTaGAGACGTAAAATAAGGAAGAGACGTTCGTGTTCTCTGTACAAT +
Preference number: 1 (lower is better)
Translates to: QLVHISKRHHFNQGC*RRKIRKRRSCSLYN
Trigger: ATTGTACAGAGAACACGAACGTCTCTTCCTTATTTTACGTCTTCAGCACCCTTGATTAAAATGGTGTCGTTTACTTATGTGCACCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR GCA 90 bp TCAGATGAAATGGCGGAAGAGGCAGCTTACAAAGAAAATGAGACTTaGTCAAGGCACACAAATTTTTATACTTCATACAGAAACAGTCAC +
Preference number: 1 (lower is better)
Translates to: SDEMAEEAAYKENET*SRHTNFYTSYRNSH
Trigger: GTGACTGTTTCTGTATGAAGTATAAAAATTTGTGTGCCTTGAGCAAGTCTCATTTTCTTTGTAAGCTGCCTCTTCCGCCATTTCATCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGGCAGGGAGGGGCAGTaGAAGACTGACATTCCTGCT +
Preference number: 2 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSGREGQ*KTDIPA
Trigger: AGCAGGAATGTCAGTCTTCCACTGCCCCTCCCTGCC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGTGCCCCCATCTCCCTaGAAACCCTTCCAACAAGGC +
Preference number: 2 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTVPPSP*KPFQQG
Trigger: GCCTTGTTGGAAGGGTTTTCAGGGAGATGGGGGCAC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTAGATCAGCAGGGGTTTaGTCCCCTGGTGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGRSAGV*SPGGQR
Trigger: TCTTTGCCCACCAGGGGATCAAACCCCTGCTGATCT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGGCAGGGAGGGGCAGTaGAAGACTGACATTCCTGCT +
Preference number: 2 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTGREGQ*KTDIPA
Trigger: AGCAGGAATGTCAGTCTTCCACTGCCCCTCCCTGCC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTAAGTAGCAGAAGATaGCAGGGAGGGGCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLSSRR*QGGAVE
Trigger: TTCCACTGCCCCTCCCTGCCATCTTCTGCTACTTAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 90 bp TGCCCTGCTACACTATACTGCCTGACTACAAGAGGGTTTATGGTCTaGGGCAACCATAGTGCCCCCATCTCCCTGAAAACCCTTCCAACA +
Preference number: 2 (lower is better)
Translates to: CPATLYCLTTRGFMV*GNHSAPISLKTLPT
Trigger: TGTTGGAAGGGTTTTCAGGGAGATGGGGGCACTATGGTTGCCCAAGACCATAAACCCTCTTGTAGTCAGGCAGTATAGTGTAGCAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 90 bp GATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTaGACTCTCAAGGTCTACAGATGGCATTTCCATAAGCAGACAGCC +
Preference number: 2 (lower is better)
Translates to: DGWVASRSHLQTSVQ*TLKVYRWHFHKQTA
Trigger: GGCTGTCTGCTTATGGAAATGCCATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 90 bp GGTCTCAGAAGAGGACTGGACATGCTTGGCTCCTGCTCCTGGTCTTaGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATAC +
Preference number: 2 (lower is better)
Translates to: GLRRGLDMLGSCSWS*VKRLLSTQHGLGQY
Trigger: GTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTCTTCTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAGGGGCAGTGGAAGACTaGCATTCCTGCTCAGTTCAG +
Preference number: 2 (lower is better)
Translates to: RSLAIPNIALTCDDPGARGAVED*HSCSVQ
Trigger: CTGAACTGAGCAGGAATGTCAGTCTTCCACTGCCCC...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATCCCCAATATTGCTTTaGCATGTGATGACCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSPILL*HVMTLE
Trigger: CTCCAGGGTCATCACATGTCAAAGCAATATTGGGGA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTACACAGGTGTATGGGTaGCCACTCCCACAGAATCAA +
Preference number: 2 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSTQVYG*PLPQNQ
Trigger: TTGATTCTGTGGGAGTGGGCACCCATACACCTGTGT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTAAGTAGCAGAAGATaGCAGGGAGGGGCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLSSRR*QGGAVE
Trigger: TTCCACTGCCCCTCCCTGCCATCTTCTGCTACTTAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATACCCTGTGTGGCTTCTaGAACCATCAACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANTLCGF*NHQLPS
Trigger: GCTTGGGAGTTGATGGTTGCAGAAGCCACACAGGGT...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGGTTTGATCCCCTGGTaGGCAAAGACAGAATTTACT +
Preference number: 2 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSGLIPW*AKTEFT
Trigger: AGTAAATTCTGTCTTTGCCCACCAGGGGATCAAACC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGCAGCCACTCAGGGCTaGAAGAAAAGAGATACAAGG +
Preference number: 2 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDAATQG*KKRDTR
Trigger: CCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAATCCCTGGTGACAGGTaGCTAGGCACAGGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: LSSKDTETGQELGRGQIQIPGDR*LGTGPS
Trigger: GCTTGGCCCTGTGCCTAGTCACCTGTCACCAGGGAT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGCTTACAAAGAAAATaGGACTTGCTCAAGGCACAC +
Preference number: 2 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSLQRK*DLLKAH
Trigger: GTGTGCCTTGAGCAAGTCTCATTTTCTTTGTAAGCT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAGGGGTTTGATCCCCTaGTGGGCAAAGACAGAATTT +
Preference number: 2 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNRGLIP*WAKTEF
Trigger: AAATTCTGTCTTTGCCCACCAGGGGATCAAACCCCT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGACACGTTTGCTCAATaGTGTGTGAGCAACTATCTG +
Preference number: 2 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSDTFAQ*CVSNYL
Trigger: CAGATAGTTGCTCACACACCATTGAGCAAACGTGTC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCAACCTCAGATGAAATaGCGGAAGAGGCAGCTTACA +
Preference number: 2 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDQPQMK*RKRQLT
Trigger: TGTAAGCTGCCTCTTCCGCCATTTCATCTGAGGTTG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAGTGCCCCCATCTCCCTaGAAACCCTTCCAACAAGGC +
Preference number: 2 (lower is better)
Translates to: LSSKDTETGQELGRGQIQVPPSP*KPFQQG
Trigger: GCCTTGTTGGAAGGGTTTTCAGGGAGATGGGGGCAC...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAAGTTCCAAACTGGGTaGAGCACCAGAACCAAAGGT +
Preference number: 2 (lower is better)
Translates to: RSLAIPNIALTCDDPGARKFQTG*STRTKG
Trigger: ACCTTTGGTTCTGGTGCTTCACCCAGTTTGGAACTT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAAACATCTGTACAGTTaGCTCTCAAGGTCTACAGAT +
Preference number: 2 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSKHLYS*LSRSTD
Trigger: ATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAGGGGTTTGATCCCCTaGTGGGCAAAGACAGAATTT +
Preference number: 2 (lower is better)
Translates to: RSLAIPNIALTCDDPGARRGLIP*WAKTEF
Trigger: AAATTCTGTCTTTGCCCACCAGGGGATCAAACCCCT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 90 bp ACAGATGGCATTTCCATAAGCAGACAGCCCTATTTCCAGACCCCATaGTCCAAGAAGGGCTATTCAAGCTCCCAAGAAAATCTGTGGATC +
Preference number: 2 (lower is better)
Translates to: TDGISISRQPYFQTP*SKKGYSSSQENLWI
Trigger: GATCCACAGATTTTCTTGGGAGCTTGAATAGCCCTTCTTGGACAATGGGGTCTGGAAATAGGGCTGTCTGCTTATGGAAATGCCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGGGGCAGTGGAAGACTaGCATTCCTGCTCAGTTCAG +
Preference number: 2 (lower is better)
Translates to: FGKETSEHTTWTWPILNSGAVED*HSCSVQ
Trigger: CTGAACTGAGCAGGAATGTCAGTCTTCCACTGCCCC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTAGAACCCAACCTTCCTaGTTCAATTTCAAGTCCATT +
Preference number: 2 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGRTQPS*FNFKSI
Trigger: AATGGACTTGAAATTGAAGCAGGAAGGTTGGGTTCT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACAACCAAAGGTCAACTTaGCTCCATCAACTGGCAAAT +
Preference number: 2 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDNQRST*LHQLAN
Trigger: ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCTCAAGGTCTACAGATaGCATTTCCATAAGCAGACA +
Preference number: 2 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDLKVYR*HFHKQT
Trigger: TGTCTGCTTATGGAAATGCCATCTGTAGACCTTGAG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCAAATGACAGAAATATaGTATCAAGATCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNQMTEI*YQDQQG
Trigger: CCCCTGCTGATCTTGATATCATATTTCTGTCATTTG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAAACATCTGTACAGTTaGCTCTCAAGGTCTACAGAT +
Preference number: 2 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNKHLYS*LSRSTD
Trigger: ATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACAGAACCCAACCTTCCTaGTTCAATTTCAAGTCCATT +
Preference number: 2 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDRTQPS*FNFKSI
Trigger: AATGGACTTGAAATTGAAGCAGGAAGGTTGGGTTCT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAACCCTGTGTGGCTTCTaGAACCATCAACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FGKETSEHTTWTWPILNSTLCGF*NHQLPS
Trigger: GCTTGGGAGTTGATGGTTGCAGAAGCCACACAGGGT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAACCAAAGGTCAACTTaGCTCCATCAACTGGCAAAT +
Preference number: 2 (lower is better)
Translates to: RSLAIPNIALTCDDPGARNQRST*LHQLAN
Trigger: ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAATATGATGGGTGGGTaGCAAGCAGGAGTCACCTGC +
Preference number: 2 (lower is better)
Translates to: LSSKDTETGQELGRGQIQNMMGG*QAGVTC
Trigger: GCAGGTGACTCCTGCTTGCCACCCACCCATCATATT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTATCCATTTACAGAATTaGCCAGTACTGTGTACAACA +
Preference number: 2 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSIHLQN*PVLCTT
Trigger: TGTTGTACACAGTACTGGCCAATTCTGTAAATGGAT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCATCCATTTACAGAATTaGCCAGTACTGTGTACAACA +
Preference number: 2 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLIHLQN*PVLCTT
Trigger: TGTTGTACACAGTACTGGCCAATTCTGTAAATGGAT...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAAGTTCCAAACTGGGTaGAGCACCAGAACCAAAGGT +
Preference number: 2 (lower is better)
Translates to: FGKETSEHTTWTWPILNSKFQTG*STRTKG
Trigger: ACCTTTGGTTCTGGTGCTTCACCCAGTTTGGAACTT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGCAGCCACTCAGGGCTaGAAGAAAAGAGATACAAGG +
Preference number: 2 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEAATQG*KKRDTR
Trigger: CCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCACAAATGACAGAAATATaGTATCAAGATCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: FGKETSEHTTWTWPILNSQMTEI*YQDQQG
Trigger: CCCCTGCTGATCTTGATATCATATTTCTGTCATTTG...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR TCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACAAGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 2 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTCAAGGTCTACAGATaGCATTTCCATAAGCAGACA +
Preference number: 2 (lower is better)
Translates to: KLNKDSQLSSKDTETGQELKVYR*HFHKQT
Trigger: TGTCTGCTTATGGAAATGCCATCTGTAGACCTTGAG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGAGGACTGGACATGCTaGGCTCCTGCTCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSEDWTC*APAPGL
Trigger: AAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp TGGCGCGCAGACTGTAGTAGAATCCCTGGTGACAGGTaGCTAGGCACAGGGCCAAGCATAGGTCACAAGTCA +
Preference number: 3 (lower is better)
Translates to: WRADCSRIPGDR*LGTGPSIGHKS
Trigger: TGACTTGTGACCTATGCTTGGCCCTGTGCCTAGTCACCTGTCACCAGGGATTCTACTACAGTCTGCGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp CAGGTGTATGGGTGCCCACTCCCACAGAATCAAATATaGTGGGTGGGTGGCAAGCAGGAGTCACCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: QVYGCPLPQNQI*WVGGKQESPAN
Trigger: GTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATATTTGATTCTGTGGGAGTGGGCACCCATACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTAAGATCAGCAGGGGTTaGATCCCCTGGTGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGKISRG*IPWWAK
Trigger: CTTTGCCCACCAGGGGATCAAACCCCTGCTGATCTT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp CAGCCCCATGGACCAGACACTGTCAAGTTTCTCTTCTaGGACCTCAGAGGTCTCAGAAGAGGACTGGACATG +
Preference number: 3 (lower is better)
Translates to: QPHGPDTVKFLF*DLRGLRRGLDM
Trigger: CATGTCCAGTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTCCATGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR GCA 72 bp AGAGGTCTCAGAAGAGGACTGGACATGCTTGGCTCCTaGTCCTGGTCTTTGGTAAAGAGACTTCTGAGCACA +
Preference number: 3 (lower is better)
Translates to: RGLRRGLDMLGS*SWSLVKRLLST
Trigger: TGTGCTCAGAAGTCTCTTTACCAAAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTCTTCTGAGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp AGACCTCAGAGGTCTCAGAAGAGGACTGGACATGCTTaGCTCCTGCTCCTGGTCTTTGGTAAAGAGACTTCT +
Preference number: 3 (lower is better)
Translates to: RPQRSQKRTGHA*LLLLVFGKETS
Trigger: AGAAGTCTCTTTACCAAAGACCAGGAGCAGGAGCCAAGCATGTCCAGTCCTCTTCTGAGACCTCTGAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAATCCCCAATATTGCTTaGACATGTGATGACCCTGGA +
Preference number: 3 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSIPNIA*TCDDPG
Trigger: TCCAGGGTCATCACATGTCAAAGCAATATTGGGGAT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACATCCATTTACAGAATaGGCCAGTACTGTGTACAAC +
Preference number: 3 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSHPFTE*ASTVYN
Trigger: GTTGTACACAGTACTGGCCAATTCTGTAAATGGATG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp CCAATACCAATGAGACATACAAGAGCAGCGCTTTTCTaGGCAGCCCCATGGACCAGACACTGTCAAGTTTCT +
Preference number: 3 (lower is better)
Translates to: PIPMRHTRAALF*AAPWTRHCQVS
Trigger: AGAAACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTCATTGGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGAGGCAAAATTTATCTaGTCTAGAGAGAGAGAGTTC +
Preference number: 3 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSEAKFI*SREREF
Trigger: GAACTCTCTCTCTCTAGACAAGATAAATTTTGCCTC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGAGGCAAAATTTATCTaGTCTAGAGAGAGAGAGTTC +
Preference number: 3 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSEAKFI*SREREF
Trigger: GAACTCTCTCTCTCTAGACAAGATAAATTTTGCCTC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGAGGGTTTATGGTCTaGGGCAACCATAGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: LSSKDTETGQELGRGQIQRGFMV*GNHSAP
Trigger: GGGGGCACTATGGTTGCCCAAGACCATAAACCCTCT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp TGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTaGCTCTCAAGGTCTACAGATGGCATTTCCATAAGC +
Preference number: 3 (lower is better)
Translates to: WQAGVTCKHLYS*LSRSTDGISIS
Trigger: GCTTATGGAAATGCCATCTGTAGACCTTGAGAGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp CTGGTGGGCAAAGACAGAATTTACTTTAACCCTGTGTaGCTTCTGCAACCATCAACTCCCAAGCTAAGTAGC +
Preference number: 3 (lower is better)
Translates to: LVGKDRIYFNPV*LLQPSTPKLSS
Trigger: GCTACTTAGCTTGGGAGTTGATGGTTGCAGAAGCCACACAGGGTTAAAGTAAATTCTGTCTTTGCCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp CTGTGGATCCATGGGTTACAGATTAAAGTTCCAAACTaGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTC +
Preference number: 3 (lower is better)
Translates to: LWIHGLQIKVPN*VKHQNQRSTWL
Trigger: GAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTTTGGAACTTTAATCTGTAACCCATGGATCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp CTGGTCTTTGGTAAAGAGACTTCTGAGCACACAACATaGACTTGGCCAATACTGAATTCACTACCGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LVFGKETSEHTT*TWPILNSLPAP
Trigger: AGGAGCCGGTAGTGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR GCA 72 bp GCTTCAATTTCAAGTCCATTTAGGTGTCAGACAGATTaGCCTGCTACACTATACTGCCTGACTACAAGAGGG +
Preference number: 3 (lower is better)
Translates to: ASISSPFRCQTD*PATLYCLTTRG
Trigger: CCCTCTTGTAGTCAGGCAGTATAGTGTAGCAGGGCAATCTGTCTGACACCTAAATGGACTTGAAATTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp TATGATATCAAGATCAGCAGGGGTTTGATCCCCTGGTaGGCAAAGACAGAATTTACTTTAACCCTGTGTGGC +
Preference number: 3 (lower is better)
Translates to: YDIKISRGLIPW*AKTEFTLTLCG
Trigger: GCCACACAGGGTTAAAGTAAATTCTGTCTTTGCCCACCAGGGGATCAAACCCCTGCTGATCTTGATATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTaGCCAATACTGAATTCACTACCGGCTCCTCACTCA +
Preference number: 3 (lower is better)
Translates to: FGKETSEHTTWT*PILNSLPAPHS
Trigger: TGAGTGAGGAGCCGGTAGTGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAGAGGGTTTATGGTCTaGGGCAACCATAGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: KLNKDSQLSSKDTETGQERGFMV*GNHSAP
Trigger: GGGGGCACTATGGTTGCCCAAGACCATAAACCCTCT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAGAACCAAAGGTCAACTaGGCTCCATCAACTGGCAAA +
Preference number: 3 (lower is better)
Translates to: LSSKDTETGQELGRGQIQEPKVN*APSTGK
Trigger: TTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTC...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGAACCAAAGGTCAACTaGGCTCCATCAACTGGCAAA +
Preference number: 3 (lower is better)
Translates to: FGKETSEHTTWTWPILNSEPKVN*APSTGK
Trigger: TTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp TTCTTCTCACATAGGCAGCACAGCACTCAGTGGTTTTaGCAATTGGTGCACATAAGTAAACGACACCATTTT +
Preference number: 3 (lower is better)
Translates to: FFSHRQHSTQWF*QLVHISKRHHF
Trigger: AAAATGGTGTCGTTTACTTATGTGCACCAATTGTCAAAACCACTGAGTGCTGTGCTGCCTATGTGAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp AAATATGATATCAAGATCAGCAGGGGTTTGATCCCCTaGTGGGCAAAGACAGAATTTACTTTAACCCTGTGT +
Preference number: 3 (lower is better)
Translates to: KYDIKISRGLIP*WAKTEFTLTLC
Trigger: ACACAGGGTTAAAGTAAATTCTGTCTTTGCCCACCAGGGGATCAAACCCCTGCTGATCTTGATATCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACAAACATCTGTACAGTaGACTCTCAAGGTCTACAGA +
Preference number: 3 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEQTSVQ*TLKVYR
Trigger: TCTGTAGACCTTGAGAGTCAACTGTACAGATGTTTG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACATCCATTTACAGAATaGGCCAGTACTGTGTACAAC +
Preference number: 3 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEHPFTE*ASTVYN
Trigger: GTTGTACACAGTACTGGCCAATTCTGTAAATGGATG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR TCA 72 bp CACATAAGTAAACGACACCATTTTAATCAAGGGTGCTaGAGACGTAAAATAAGGAAGAGACGTTCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: HISKRHHFNQGC*RRKIRKRRSCS
Trigger: AGAACACGAACGTCTCTTCCTTATTTTACGTCTTCAGCACCCTTGATTAAAATGGTGTCGTTTACTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR GCA 72 bp ATGGCGGAAGAGGCAGCTTACAAAGAAAATGAGACTTaGTCAAGGCACACAAATTTTTATACTTCATACAGA +
Preference number: 3 (lower is better)
Translates to: MAEEAAYKENET*SRHTNFYTSYR
Trigger: TCTGTATGAAGTATAAAAATTTGTGTGCCTTGAGCAAGTCTCATTTTCTTTGTAAGCTGCCTCTTCCGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CCA 72 bp TTCGTGTTCTCTGTACAATACATCCATTTACAGAATTaGCCAGTACTGTGTACAACATATAAATACAGGATA +
Preference number: 3 (lower is better)
Translates to: FVFSVQYIHLQN*PVLCTTYKYRI
Trigger: TATCCTGTATTTATATGTTGTACACAGTACTGGCCAATTCTGTAAATGGATGTATTGTACAGAGAACACGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATGGCAGGAGGACTCCGTaGTGGGGACGATCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANGRRTP*WGRSGG
Trigger: GCCCCCGGATCGTCCCCATCACGGAGTCCTCCTGCC...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTGTCTGCGAGGGTCCTaGCACCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSCLRGS*HQSNPG
Trigger: GCCGGGGTTGGACTGGTGCCAGGACCCTCGCAGACA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGAGCCAGGCCTCAGTaGGCACACAGACCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSRARPQ*AHRPRL
Trigger: CAGCCGAGGTCTGTGTGCCCACTGAGGCCTGGCTCT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGTGTTGGGCCCACGCTaGGGCCGCACAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLVLGPR*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCGCAGCGTGGGCCCAACAC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACGTGTTGGGCCCACGCTaGGGCCGCACAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNVLGPR*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCGCAGCGTGGGCCCAACAC...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACACTGTCACTGCCAGTaGTGCCCACAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSHCHCQ*CPQLLE
Trigger: CTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGGCTGTCCCTGGGATTaGAGAGGGGTCGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSGCPWD*RGVGSE
Trigger: CTCAGAGCCGACCCCTCTCCAATCCCAGGGACAGCC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACTCTCGCCATCTGCGTaGCGGCCTGAGAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSLSPSA*RPENPD
Trigger: GTCAGGATTCTCAGGCCGCCACGCAGATGGCGAGAG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCCCCTCCGATGGCAGTaGTGGCCGTCTCTCGATTGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSPLRWQ*WPSLDC
Trigger: GCAATCGAGAGACGGCCACCACTGCCATCGGAGGGG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCCCCTCCGATGGCAGTaGTGGCCGTCTCTCGATTGC +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGPLRWQ*WPSLDC
Trigger: GCAATCGAGAGACGGCCACCACTGCCATCGGAGGGG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCACCTCCCTCATCGATaGCCCCACTGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGHLPHR*PHCHLH
Trigger: GTGGAGGTGGCAGTGGGGCCATCGATGAGGGAGGTG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCTCTCCAGAGGTGCTTaGGGCTCCCCTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDLSRGA*GSPGLR
Trigger: CCTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGGAGCAATAGGGGGTTaGGAGGCATCTTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSGAIGG*EASSSP
Trigger: TGGGCTGGAAGATGCCTCTCAACCCCCTATTGCTCC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGTTCACCTTGGACAGTaGGGCAGATGGGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSVHLGQ*GRWVPV
Trigger: GACTGGGACCCATCTGCCTCACTGTCCAAGGTGAAC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGAAGGCTCCAGGGGTTaGCTGAACCCTTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSEGSRG*LNPFPG
Trigger: GCCAGGGAAAGGGTTCAGTCAACCCCTGGAGCCTTC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACTCGAATGGCACTGTTaGCCAAGGCCAGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSLEWHC*PRPENR
Trigger: GCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCACTCTCTCCAGAGGTaGTTGGGGCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLHSLQR*LGLPWA
Trigger: AGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGAGTG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGGCTGTCCCTGGGATTaGAGAGGGGTCGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTGCPWD*RGVGSE
Trigger: CTCAGAGCCGACCCCTCTCCAATCCCAGGGACAGCC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGCTGCTGCTGCTCGATaGACTGCCACTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSAAAAR*TATLAI
Trigger: GATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCGAGTGACCTCGGCCTaGCCTCGAATGGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRVTSA*PRMALL
Trigger: CAACAGTGCCATTCGAGGCCAGGCCGAGGTCACTCG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTCTCCAGAGGTGCTTaGGGCTCCCCTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLSRGA*GSPGLR
Trigger: CCTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCTGTCCAGATGTTGCTaGGGACACATCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGLSRCC*GHIWPR
Trigger: CCTGGGCCAGATGTGTCCTCAGCAACATCTGGACAG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTCTAGACACCCAGCTCTaGGAAGCAGCCACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTLDTQL*EAATPP
Trigger: AGGAGGGGTGGCTGCTTCTCAGAGCTGGGTGTCTAG...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTAGACACCCAGCTCTaGGAAGCAGCCACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLDTQL*EAATPP
Trigger: AGGAGGGGTGGCTGCTTCTCAGAGCTGGGTGTCTAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTCGAATGGCACTGTTaGCCAAGGCCAGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLEWHC*PRPENR
Trigger: GCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGGCAAATGAAGCGCAACAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAACGGGCTTTAATGTCTaGGAGGGTCCTGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSTGFNV*EGPGTS
Trigger: ACTGGTGCCAGGACCCTCGCAGACATTAAAGCCCGT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCTCGCCCCTCGGGCCTaGAAAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDLAPRA*KARALM
Trigger: CATTAAAGCCCGTGCTTTGCAGGCCCGAGGGGCGAG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGCAGGTAGTGGTGTCTaGTCTTCAGACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSAGSGV*SSDLGH
Trigger: GTGCCCCAGGTCTGAAGAGCAGACACCACTACCTGC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTTCGGCCACTGGAGTTTaGGAGGACAGAGGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGSATGV*EDRGGK
Trigger: TTTGCCCCCTCTGTCCTCCCAAACTCCAGTGGCCGA...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTGTTTGTTTGCCTGTaGGGAAGCCCTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLFVCL*GSPVAV
Trigger: GACAGCCACAGGGCTTCCTCACAGGCAAACAAACAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTGTCCAGATGTTGCTaGGGACACATCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLSRCC*GHIWPR
Trigger: CCTGGGCCAGATGTGTCCTCAGCAACATCTGGACAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAGGCAGGAGGACTCCGTaGTGGGGACGATCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQGRRTP*WGRSGG
Trigger: GCCCCCGGATCGTCCCCATCACGGAGTCCTCCTGCC...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGTTCACCTTGGACAGTaGGGCAGATGGGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLVHLGQ*GRWVPV
Trigger: GACTGGGACCCATCTGCCTCACTGTCCAAGGTGAAC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGTTGGTAACCTCCACTaGAGAGCCAGGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTVGNLH*RARPQW
Trigger: CCACTGAGGCCTGGCTCTTCAGTGGAGGTTACCAAC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATCAGACCTGGGGCACTaGAGGGTGGTAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSDLGH*RVVTVF
Trigger: GAATACAGTTACCACCCTTCAGTGCCCCAGGTCTGA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGGCATCCCTTGCAAGTaGCCCACTAGTTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSGIPCK*PTSSRE
Trigger: TTCTCTGGAACTAGTGGGTCACTTGCAAGGGATGCC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAGAAGGCTCCAGGGGTTaGCTGAACCCTTTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGAREGSRG*LNPFPG
Trigger: GCCAGGGAAAGGGTTCAGTCAACCCCTGGAGCCTTC...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGGCAAATGAAGCGCAACAG...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCCTCTTCCCCTCTGTTaGGCTTCATTTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSPLPLC*ASFALW
Trigger: CCACAGGGCAAATGAAGCGCAACAGAGGGGAAGAGG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGGAGGAGGAGGAGTTaGTGCTGGAAGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRRRRS*CWKCSG
Trigger: GCCACTACACTTCCAGCAGCAACTCCTCCTCCTCCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGTCTGGTGCAGCACTTaGATCTTTAGCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSVWCST*IFSNPC
Trigger: GCAGGGGTTGCTAAAGATGCAAGTGCTGCACCAGAC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTCGCCCCTCGGGCCTaGAAAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLAPRA*KARALM
Trigger: CATTAAAGCCCGTGCTTTGCAGGCCCGAGGGGCGAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTGGCCGTCTCTCGATTaGAGTGGTAACCTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDWPSLD*SGNLSP
Trigger: GGGCGAGAGGTTACCACTGCAATCGAGAGACGGCCA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTACCATCACCACTGCTaGTGTCTCTGCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSYHHHC*CLCHLP
Trigger: AGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAGTGCTGCCCACAGCTaGTGGAGGAGGTGTCCAATG +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNSAAHS*WRRCPM
Trigger: CATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTTGCTCACTGTCACTaGCAGTGCTGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLAHCH*QCCPQL
Trigger: CAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGCAGGTAGTGGTGTCTaGTCTTCAGACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDAGSGV*SSDLGH
Trigger: GTGCCCCAGGTCTGAAGAGCAGACACCACTACCTGC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACACATAAACCACTCTTaGCTTTGGCCTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSHINHS*LWPPPG
Trigger: TCCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATTTCTGTTGCTGCAATaGGAGGAACAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSFLLLQ*EEQLSP
Trigger: GGGAGAGAGCTGTTCCTCTCATTGCAGCAACAGAAA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAGTCGGCTGCTTCTGTaGCCTGGAGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNSRLLL*PGGRTF
Trigger: GAAGGTTCTTCCTCCAGGTCACAGAAGCAGCCGACT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCCACCAGCATTGTTCTaGTCACTCAGGGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGPPALF*SLRVPS
Trigger: AGATGGGACCCTGAGTGATCAGAACAATGCTGGTGG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTCAGACCTGGGGCACTaGAGGGTGGTAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSSDLGH*RVVTVF
Trigger: GAATACAGTTACCACCCTTCAGTGCCCCAGGTCTGA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCCTCTTCCCCTCTGTTaGGCTTCATTTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLPLPLC*ASFALW
Trigger: CCACAGGGCAAATGAAGCGCAACAGAGGGGAAGAGG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAGGAGGAGGAGTTGCTaGTGGAAGTGTAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNRRRSC*WKCSGR
Trigger: CCTGCCACTACACTTCCAGCAGCAACTCCTCCTCCT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTAGGAGGAGGAGGAGTTaGTGCTGGAAGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTRRRRS*CWKCSG
Trigger: GCCACTACACTTCCAGCAGCAACTCCTCCTCCTCCT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGATGCAGAGGCACATaGCAAGTTGTCCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSRCRGT*QVVPFC
Trigger: GCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTACGGGCTTTAATGTCTaGGAGGGTCCTGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTTGFNV*EGPGTS
Trigger: ACTGGTGCCAGGACCCTCGCAGACATTAAAGCCCGT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGATGGCCGTCTCTCGATTaGAGTGGTAACCTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARWPSLD*SGNLSP
Trigger: GGGCGAGAGGTTACCACTGCAATCGAGAGACGGCCA...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCACTACCATCACCACTaGTGCTGTCTCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLHYHHH*CCLCHL
Trigger: GAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTTGCTCACTGTCACTaGCAGTGCTGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLAHCH*QCCPQL
Trigger: CAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGGGTCCCATCTGTCTaGTCAGATCCAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRVPSV*SDPKER
Trigger: CCTCTCCTTTGGATCTGAGCAGACAGATGGGACCCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATGCTTTGTGGCTCAGCTaGACCACACCACCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANALWLS*TTPPAR
Trigger: CCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGC...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATGCTTCATTTGCCCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANASFAL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGGCAAATGAAGC...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAAGCCACAGGTTCACTaGGACACTTGGGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNKPQVH*DTWDPP
Trigger: AGGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTCCGATGGCAGTGGTaGCCGTCTCTCGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLRWQW*PSLDCS
Trigger: ACTGCAATCGAGAGACGGCCACCACTGCCATCGGAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCATGGCAGCTTCAGCTaGAGTGTGCTCTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSHGSFS*SVLSIQ
Trigger: CTGAATGGAGAGCACACTCCAGCTGAAGCTGCCATG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTTCTCTTCTGGCTCTaGGCATGGCAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLLFWL*AWQLQL
Trigger: CAGCTGAAGCTGCCATGCCCAGAGCCAGAAGAGAAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCTGAGTCTTCTCTTCTaGCTCTGGGCATGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGLSLLF*LWAWQL
Trigger: AAGCTGCCATGCCCAGAGCCAGAAGAGAAGACTCAG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAACTTGTAAGCACACCTaGGACCCTCTTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSTCKHT*DPLQQA
Trigger: TGCCTGTTGAAGAGGGTCCCAGGTGTGCTTACAAGT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACGGCCTGTACCAAAGCTaGCTTTGTGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNGLYQS*LCGSAA
Trigger: TGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCC...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNVLRKD*RSSSRG
Trigger: ACCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTCTGTGGATTCACTGTaGGGACTTGGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSSVDSL*GLGASE
Trigger: CTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGGCATCCCTTGCAAGTaGCCCACTAGTTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLGIPCK*PTSSRE
Trigger: TTCTCTGGAACTAGTGGGTCACTTGCAAGGGATGCC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGTCTGGTGCAGCACTTaGATCTTTAGCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLVWCST*IFSNPC
Trigger: GCAGGGGTTGCTAAAGATGCAAGTGCTGCACCAGAC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCAAGTTGTCCCTTTCTaGTTGGATCTGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSQVVPF*LDLGSH
Trigger: GTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTAGATGCAGAGGCACATaGCAAGTTGTCCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGRCRGT*QVVPFC
Trigger: GCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTACCATCACCACTGCTaGTGTCTCTGCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANYHHHC*CLCHLP
Trigger: AGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGGCACACTTTCTGTTaGTGCAATGAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGGHTFC*CNERNS
Trigger: GCTGTTCCTCTCATTGCAGCAACAGAAAGTGTGCCC...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTTGCATCAACCTCACTaGTGTCCTCAGAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLHQPH*CPQRDG
Trigger: GCCATCTCTCTGAGGACAGCAGTGAGGTTGATGCAA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACAGGGTCCCATCTGTCTaGTCAGATCCAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDRVPSV*SDPKER
Trigger: CCTCTCCTTTGGATCTGAGCAGACAGATGGGACCCT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACAGAGAACTGTACCCTaGAGCTTTTCTGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSQRTVP*SFSVLC
Trigger: GCAGAGAACAGAAAAGCTGCAGGGTACAGTTCTCTG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGCTTTCAGGCTGCATaGACATTGGAGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGGFQAA*TLERDA
Trigger: AGCATCTCTCTCCAATGTGCATGCAGCCTGAAAGCC...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATATCAGCGGAGTCCTCTaGCTCGTCTCCATCCACTGT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANISGVL*LVSIHC
Trigger: ACAGTGGATGGAGACGAGCCAGAGGACTCCGCTGAT...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTTATTCCTTCTGGATCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGYSFWI*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGATCCAGAAGGAATA...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAGTTCACTGGGACACTTaGGACCCTCCTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARVHWDT*DPPVQM
Trigger: CATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAAC...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCTTTCTGCTTGGATCTaGGAAGCCACAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGLSAWI*EATGSL
Trigger: CAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGGTAGGGATTCTGTCTaGAGATGCAGAGGCACATGC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLGRDSV*RCRGTC
Trigger: GCATGTGCCTCTGCATCTCCAGACAGAATCCCTACC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTTCTGGCTCTGGGCATaGCAGCTTCAGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANFWLWA*QLQLEC
Trigger: ACACTCCAGCTGAAGCTGCCATGCCCAGAGCCAGAA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGCTGCTTCTGTGACCTaGAGGAAGAACCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSAASVT*RKNLLQ
Trigger: TTGGAGAAGGTTCTTCCTCCAGGTCACAGAAGCAGC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACCAAAGCTGGCTTTGTaGCTCAGCTGCACCACACCA +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARPKLAL*LSCTTP
Trigger: TGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATGGCCTGTACCAAAGCTaGCTTTGTGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANGLYQS*LCGSAA
Trigger: TGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCC...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTTGCATCTCATGAGTaGATTCACCATCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLASHE*IHHQQG
Trigger: GCCTTGCTGATGGTGAATTCACTCATGAGATGCAAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCACATAAACCACTCTTaGCTTTGGCCTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLHINHS*LWPPPG
Trigger: TCCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACCACCAGCATTGTTCTaGTCACTCAGGGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARPPALF*SLRVPS
Trigger: AGATGGGACCCTGAGTGATCAGAACAATGCTGGTGG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTGGTGGGACTGAGCTaGAGTTTAGACAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLVGLS*SLDNFP
Trigger: TGGGAAGTTGTCTAAACTTCAGCTCAGTCCCACCAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCAAGTTGTCCCTTTCTaGTTGGATCTGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNQVVPF*LDLGSH
Trigger: GTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACACACTTTCTGTTGCTaGAATGAGAGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSHTFCC*NERNSS
Trigger: AGAGCTGTTCCTCTCATTGCAGCAACAGAAAGTGTG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGGGCACACTTTCTGTTaGTGCAATGAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDGHTFC*CNERNS
Trigger: GCTGTTCCTCTCATTGCAGCAACAGAAAGTGTGCCC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTTTCAAGGTCCACTTaGTCACTGTCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLSRST*SLSLPV
Trigger: CACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTTGCATCAACCTCACTaGTGTCCTCAGAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTLHQPH*CPQRDG
Trigger: GCCATCTCTCTGAGGACAGCAGTGAGGTTGATGCAA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTTACCATGCAGCAGGTaGATCACAAGTGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLPCSR*ITSGLV
Trigger: TACCAACCCACTTGTGATGCACCTGCTGCATGGTAA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATTTTCCCTTGTAGTTTaGACACCACCAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSFSLVV*TPPDTE
Trigger: CTCTGTGTCTGGTGGTGTGCAAACTACAAGGGAAAA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGGCTTTCAGGCTGCATaGACATTGGAGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLGFQAA*TLERDA
Trigger: AGCATCTCTCTCCAATGTGCATGCAGCCTGAAAGCC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTTCATGGCTTTCAGGCTaGATGCACATTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGSWLSG*MHIGER
Trigger: TCTCTCTCCAATGTGCATGCAGCCTGAAAGCCATGA...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGCTTTGAAGGTCCAATaGAGTCATCATGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSALKVQ*SHHGRM
Trigger: CATTCTGCCATGATGACTGCATTGGACCTTCAAAGC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTGTAGTGGCAGGGCATaGAAGGTCCGAGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLCSGRA*KVREFI
Trigger: GATAAACTCTCGGACCTTCCATGCCCTGCCACTACA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATCTGGTTCGGAGATCTaGCCGAGAACGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSGSEI*PRTFLK
Trigger: TTTAAGAAACGTTCTCGGCCAGATCTCCGAACCAGA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACATGGCAGCTTCAGCTaGAGTGTGCTCTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARHGSFS*SVLSIQ
Trigger: CTGAATGGAGAGCACACTCCAGCTGAAGCTGCCATG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTGAGTCTTCTCTTCTaGCTCTGGGCATGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLSLLF*LWAWQL
Trigger: AAGCTGCCATGCCCAGAGCCAGAAGAGAAGACTCAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTACTTGTAAGCACACCTaGGACCCTCTTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTTCKHT*DPLQQA
Trigger: TGCCTGTTGAAGAGGGTCCCAGGTGTGCTTACAAGT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTCTGGGGCTCCGGACATaGTATGTTTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTLGLRT*YVFSGF
Trigger: GAATCCAGAGAAAACATACCATGTCCGGAGCCCCAG...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTGGGGCTCCGGACATaGTATGTTTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLGLRT*YVFSGF
Trigger: GAATCCAGAGAAAACATACCATGTCCGGAGCCCCAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATTCACTGTGAGGACTTaGTGCTTCAGAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSFTVRT*CFRDAI
Trigger: AATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCAGAGGCTGTATCTGTaGATTCACTGTGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGQRLYL*IHCEDL
Trigger: CAAGTCCTCACAGTGAATCCACAGATACAGCCTCTG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGAGCCAGGCCTCAGTaGGCACACAGACCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQRARPQ*AHRPRL
Trigger: CAGCCGAGGTCTGTGTGCCCACTGAGGCCTGGCTCT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGCTGCTTCTGTGACCTaGAGGAAGAACCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTAASVT*RKNLLQ
Trigger: TTGGAGAAGGTTCTTCCTCCAGGTCACAGAAGCAGC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTAGCAGAGACAGGAGGTaGTTTGGGCATCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTSRDRR*FGHPVF
Trigger: GAAAACAGGATGCCCAAACCACCTCCTGTCTCTGCT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTTTCCCTGGCTCTCTaGGTAACTTCCAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLSLAL*VTSRKA
Trigger: TGCCTTTCTGGAAGTTACCCAGAGAGCCAGGGAAAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTGCTTGATGTTGAGTTaGGAAGGGATGGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSCLMLS*EGMEEG
Trigger: GCCTTCTTCCATCCCTTCCCAACTCAACATCAAGCA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTTTCTGAGAGAAGCTaGGTCTTCTCTTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLSERS*VFSSGS
Trigger: AGAGCCAGAAGAGAAGACTCAGCTTCTCTCAGAAAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTTTCTGAGAGAAGCTaGGTCTTCTCTTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLSERS*VFSSGS
Trigger: AGAGCCAGAAGAGAAGACTCAGCTTCTCTCAGAAAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAGGAGGTGTCCAATGTaGAATGCAGCTCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARRRCPM*NAALRL
Trigger: CAACCTGAGAGCTGCATTTCACATTGGACACCTCCT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGATCTGTGGATTCACTGTaGGGACTTGGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARSVDSL*GLGASE
Trigger: CTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGA...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATATGTCTGCTCTGTCTTaGTGCTGTCAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANMSALS*CCQQRQ
Trigger: CTGTCTCTGCTGACAGCATCAAGACAGAGCAGACAT...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTGGTGGGACTGAGCTaGAGTTTAGACAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLVGLS*SLDNFP
Trigger: TGGGAAGTTGTCTAAACTTCAGCTCAGTCCCACCAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTCCATCCACTGTAGCTaGATTTCTAGACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNSIHCS*ISRPLH
Trigger: GTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTCGCCAGCTCTGAGCTaGATGGGTGAAAAACTCATT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLSPALS*MGEKLI
Trigger: AATGAGTTTTTCACCCATGCAGCTCAGAGCTGGCGA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTTCCTGGACCTCTTTCTaGTGCAGTGATTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGSWTSF*CSDSSL
Trigger: CAAAGAAGAATCACTGCAGCAGAAAGAGGTCCAGGA...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGATGCAGAGGCTTCCTaGTCAAAGGATTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSDAEAS*SKDFLF
Trigger: GAAGAGAAAATCCTTTGAGCAGGAAGCCTCTGCATC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTTTCAAGGTCCACTTaGTCACTGTCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLSRST*SLSLPV
Trigger: CACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTTACCATGCAGCAGGTaGATCACAAGTGGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDLPCSR*ITSGLV
Trigger: TACCAACCCACTTGTGATGCACCTGCTGCATGGTAA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACTATTTCTTCCAGATTaGCAGAGGAAGGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSLFLPD*QRKVSV
Trigger: AACTGACACCTTCCTCTGGCAATCTGGAAGAAATAG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAGAATGGCCTTCTTTCTaGTCTTCACAAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSEWPSF*SSQRKE
Trigger: TTCCTTCCTTTGTGAAGAGCAGAAAGAAGGCCATTC...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGAGATGCTTTCTACTaGACTGCTGTCAGCGAACAT +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRDAFY*TAVSEH
Trigger: ATGTTCGCTGACAGCAGTGCAGTAGAAAGCATCTCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTCATGGCTTTCAGGCTaGATGCACATTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLSWLSG*MHIGER
Trigger: TCTCTCTCCAATGTGCATGCAGCCTGAAAGCCATGA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATCTTTCTGCTTGGATCTaGGAAGCCACAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANLSAWI*EATGSL
Trigger: CAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAG...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGAGGCTCACATTTGTaGAGGAGAAACATGGCACTT +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRGSHL*RRNMAL
Trigger: AAGTGCCATGTTTCTCCTCCACAAATGTGAGCCTCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTGCTTGATGTTGAGTTaGGAAGGGATGGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNCLMLS*EGMEEG
Trigger: GCCTTCTTCCATCCCTTCCCAACTCAACATCAAGCA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGGCTGCATGCACATTaGAGAGAGATGCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRLHAH*REMLST
Trigger: AGTAGAAAGCATCTCTCTCCAATGTGCATGCAGCCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTAGAGCAGGATGCATTTaGAGATGTTTCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSRAGCI*RCFIQR
Trigger: TCTCTGGATGAAACATCTTCAAATGCATCCTGCTCT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTGACTTGCATCTCATaGGTGAATTCACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLTCIS*VNSPSA
Trigger: TGCTGATGGTGAATTCACTCATGAGATGCAAGTCAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTCTTTCTGCTGCAGTaGTTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLFLLQ*FFFGQT
Trigger: GGTTTGACCAAAGAAGAATCACTGCAGCAGAAAGAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAGCTCTCTTCCTTTCTaGGAGAAGCTGAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARSSLPF*EKLSLL
Trigger: GAGAAGACTCAGCTTCTCTCAGAAAGGAAGAGAGCT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGGAGCAATAGGGGGTTaGGAGGCATCTTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSGAIGG*EASSSP
Trigger: TGGGCTGGAAGATGCCTCTCAACCCCCTATTGCTCC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGTTGGTAACCTCCACTaGAGAGCCAGGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSVGNLH*RARPQW
Trigger: CCACTGAGGCCTGGCTCTTCAGTGGAGGTTACCAAC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATACTTTGGAGGTAGTGTaGTCTCCTAGACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANTLEVV*SPRHWP
Trigger: AGGCCAATGTCTAGGAGATCACACTACCTCCAAAGT...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDFLQSF*LYDLQN
Trigger: ATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTCGCCAGCTCTGAGCTaGATGGGTGAAAAACTCATT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANSPALS*MGEKLI
Trigger: AATGAGTTTTTCACCCATGCAGCTCAGAGCTGGCGA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTGGACCTCTTTCTGCTaGAGTGATTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDWTSFC*SDSSLV
Trigger: GACCAAAGAAGAATCACTGCAGCAGAAAGAGGTCCA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGATGCAGAGGCTTCCTaGTCAAAGGATTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDDAEAS*SKDFLF
Trigger: GAAGAGAAAATCCTTTGAGCAGGAAGCCTCTGCATC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACACTCTCTCCAGAGGTaGTTGGGGCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEHSLQR*LGLPWA
Trigger: AGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGAGTG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCACACTTTCTGTTGCTaGAATGAGAGGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNHTFCC*NERNSS
Trigger: AGAGCTGTTCCTCTCATTGCAGCAACAGAAAGTGTG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGTGCTGCCCACAGCTaGTGGAGGAGGTGTCCAATG +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSSAAHS*WRRCPM
Trigger: CATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACACTGTGAGGACTTGGTaGTTCAGAGATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDTVRTW*FRDAIH
Trigger: ATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCACTGTGAGGACTTGGTaGTTCAGAGATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLTVRTW*FRDAIH
Trigger: ATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGT...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACTGTACCTTGTAGAGTaGCTCTATCCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARLYLVE*LYPGSV
Trigger: AACAGAGCCAGGATAGAGGCACTCTACAAGGTACAG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACTCTTTCAATGTTTGTaGAGAACCAGGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSLFQCL*RTRVDS
Trigger: AGAATCAACCCTGGTTCTGCACAAACATTGAAAGAG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTCTGTCTCTGGATaGTGTGAGTCTAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSSVSG*CESKLV
Trigger: TACAAGTTTAGACTCACAGCATCCAGAGACAGAACT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGAATGGCCTTCTTTCTaGTCTTCACAAAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSEWPSF*SSQRKE
Trigger: TTCCTTCCTTTGTGAAGAGCAGAAAGAAGGCCATTC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGCTTTGTGGCTCAGCTaGACCACACCACCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSALWLS*TTPPAR
Trigger: CCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACAGAGATGCTTTCTACTaGACTGCTGTCAGCGAACAT +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDRDAFY*TAVSEH
Trigger: ATGTTCGCTGACAGCAGTGCAGTAGAAAGCATCTCT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACGCTTTGAAGGTCCAATaGAGTCATCATGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNALKVQ*SHHGRM
Trigger: CATTCTGCCATGATGACTGCATTGGACCTTCAAAGC...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATCGGCCACTGGAGTTTaGGAGGACAGAGGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQSATGV*EDRGGK
Trigger: TTTGCCCCCTCTGTCCTCCCAAACTCCAGTGGCCGA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTTCACTGTGAGGACTTaGTGCTTCAGAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNFTVRT*CFRDAI
Trigger: AATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACAGAGGCTGTATCTGTaGATTCACTGTGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARQRLYL*IHCEDL
Trigger: CAAGTCCTCACAGTGAATCCACAGATACAGCCTCTG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCAGAGGCTCACATTTGTaGAGGAGAAACATGGCACTT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLRGSHL*RRNMAL
Trigger: AAGTGCCATGTTTCTCCTCCACAAATGTGAGCCTCT...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATCTGACTTGCATCTCATaGGTGAATTCACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANLTCIS*VNSPSA
Trigger: TGCTGATGGTGAATTCACTCATGAGATGCAAGTCAG...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGTCGGCTGCTTCTGTaGCCTGGAGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSSRLLL*PGGRTF
Trigger: GAAGGTTCTTCCTCCAGGTCACAGAAGCAGCCGACT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTCTAGACCACTGCACTaGATCTTTCTTGAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDSRPLH*IFLECE
Trigger: TTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGCATTTCTAGACCACTaGACTGCATCTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDAFLDH*TASFLS
Trigger: ACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGGAGGAGGAGTTGCTaGTGGAAGTGTAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQRRRSC*WKCSGR
Trigger: CCTGCCACTACACTTCCAGCAGCAACTCCTCCTCCT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTGGACCTCTTTCTGCTaGAGTGATTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANWTSFC*SDSSLV
Trigger: GACCAAAGAAGAATCACTGCAGCAGAAAGAGGTCCA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACACTACCATCACCACTaGTGCTGTCTCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQHYHHH*CCLCHL
Trigger: GAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACACTGTCACTGCCAGTaGTGCCCACAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEHCHCQ*CPQLLE
Trigger: CTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCAGACACAGAGTTTTTaGTTGGTTCTATCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSQTQSF*LVLSSY
Trigger: GTAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTCAGACACAGAGTTTTTaGTTGGTTCTATCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGQTQSF*LVLSSY
Trigger: GTAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTG...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTCCCTCAAAAATGTCTaGTCTGTCTTGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTSLKNV*SVLMLS
Trigger: TGACAGCATCAAGACAGAGCAGACATTTTTGAGGGA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTGCTTTCTACTGCACTaGTGTCAGCGAACATTTGTA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLCFLLH*CQRTFV
Trigger: TACAAATGTTCGCTGACAGCAGTGCAGTAGAAAGCA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAATCAGCGGAGTCCTCTaGCTCGTCTCCATCCACTGT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSISGVL*LVSIHC
Trigger: ACAGTGGATGGAGACGAGCCAGAGGACTCCGCTGAT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGCTGCTGCTGCTCGATaGACTGCCACTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEAAAAR*TATLAI
Trigger: GATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGATCTGGTTCGGAGATCTaGCCGAGAACGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARSGSEI*PRTFLK
Trigger: TTTAAGAAACGTTCTCGGCCAGATCTCCGAACCAGA...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAAGCCACAGGTTCACTaGGACACTTGGGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSKPQVH*DTWDPP
Trigger: AGGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATTCTGGCTCTGGGCATaGCAGCTTCAGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQFWLWA*QLQLEC
Trigger: ACACTCCAGCTGAAGCTGCCATGCCCAGAGCCAGAA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCACTTCTCTTCTGGCTCTaGGCATGGCAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSLLFWL*AWQLQL
Trigger: CAGCTGAAGCTGCCATGCCCAGAGCCAGAAGAGAAG...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACCAAAGCTGGCTTTGTaGCTCAGCTGCACCACACCA +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQPKLAL*LSCTTP
Trigger: TGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSVLRKD*RSSSRG
Trigger: ACCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAGCATTTCTAGACCACTaGACTGCATCTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSLAIPNIALTCDDPGARAFLDH*TASFLS
Trigger: ACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGC...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTTGGTGCTTCAGAGATaGCATTCATTTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTLVLQR*HSFPVF
Trigger: AAAGACTGGAAATGAATGGCATCTCTGAAGCACCAA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACAGTTCTGTCTCTGGATaGTGTGAGTCTAAACTTGTA +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDSSVSG*CESKLV
Trigger: TACAAGTTTAGACTCACAGCATCCAGAGACAGAACT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATCTATTTCTTCCAGATTaGCAGAGGAAGGTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANLFLPD*QRKVSV
Trigger: AACTGACACCTTCCTCTGGCAATCTGGAAGAAATAG...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGACGCAGGTTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEDAGST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAACCTGCGTC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGCTTCATTTGCCCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEASFAL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGGCAAATGAAGC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAACTTTGGCCTCCTCCTaGACCTCTTTCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSTLASS*TSFCCS
Trigger: ACTGCAGCAGAAAGAGGTCCAGGAGGAGGCCAAAGT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAACTTTGGCCTCCTCCTaGACCTCTTTCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQTLASS*TSFCCS
Trigger: ACTGCAGCAGAAAGAGGTCCAGGAGGAGGCCAAAGT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTGTATATATTCCTTCTaGATCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNCIYSF*IWFGDL
Trigger: CAGATCTCCGAACCAGATCCAGAAGGAATATATACA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTGTATATATTCCTTCTaGATCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTCIYSF*IWFGDL
Trigger: CAGATCTCCGAACCAGATCCAGAAGGAATATATACA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAGGTAGGGATTCTGTCTaGAGATGCAGAGGCACATGC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQGRDSV*RCRGTC
Trigger: GCATGTGCCTCTGCATCTCCAGACAGAATCCCTACC...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTCCGATGGCAGTGGTaGCCGTCTCTCGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQELRWQW*PSLDCS
Trigger: ACTGCAATCGAGAGACGGCCACCACTGCCATCGGAG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACATATTATCAAAGGCCTaGTCACTTCCTCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNILSKA*SLPPPN
Trigger: ATTAGGAGGAGGAAGTGACCAGGCCTTTGATAATAT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAAGAGAGATGCTCTTTaGAATCTATTTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSKRDAL*NLFLPD
Trigger: ATCTGGAAGAAATAGATTCCAAAGAGCATCTCTCTT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAATGTCTGCTCTGTCTTaGTGCTGTCAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQMSALS*CCQQRQ
Trigger: CTGTCTCTGCTGACAGCATCAAGACAGAGCAGACAT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTTGGTGCTTCAGAGATaGCATTCATTTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANLVLQR*HSFPVF
Trigger: AAAGACTGGAAATGAATGGCATCTCTGAAGCACCAA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATGTAGTGGCAGGGCATaGAAGGTCCGAGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQCSGRA*KVREFI
Trigger: GATAAACTCTCGGACCTTCCATGCCCTGCCACTACA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGTTCACTGGGACACTTaGGACCCTCCTGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEVHWDT*DPPVQM
Trigger: CATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAAC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGCAGAGACAGGAGGTaGTTTGGGCATCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQSRDRR*FGHPVF
Trigger: GAAAACAGGATGCCCAAACCACCTCCTGTCTCTGCT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 72 bp ATTTCCATAAGCAGACAGCCCTATTTCCAGACCCCATaGTCCAAGAAGGGCTATTCAAGCTCCCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ISISRQPYFQTP*SKKGYSSSQEN
Trigger: ATTTTCTTGGGAGCTTGAATAGCCCTTCTTGGACAATGGGGTCTGGAAATAGGGCTGTCTGCTTATGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGTATCTTTAGAGAGTaGGACGTCTGGTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQSIFRE*DVWCST
Trigger: AGTGCTGCACCAGACGTCTCACTCTCTAAAGATACT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAGCTCTCTTCCTTTCTaGGAGAAGCTGAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQSSLPF*EKLSLL
Trigger: GAGAAGACTCAGCTTCTCTCAGAAAGGAAGAGAGCT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAACTTTGGAGGTAGTGTaGTCTCCTAGACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQTLEVV*SPRHWP
Trigger: AGGCCAATGTCTAGGAGATCACACTACCTCCAAAGT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACTGTACCTTGTAGAGTaGCTCTATCCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQLYLVE*LYPGSV
Trigger: AACAGAGCCAGGATAGAGGCACTCTACAAGGTACAG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACAGAGAACTGTACCCTaGAGCTTTTCTGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQQRTVP*SFSVLC
Trigger: GCAGAGAACAGAAAAGCTGCAGGGTACAGTTCTCTG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACATGGTATGTTTTCTCTaGATTCTGGATCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDMVCFL*ILDQMF
Trigger: AAACATCTGATCCAGAATCCAGAGAAAACATACCAT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCATGGTATGTTTTCTCTaGATTCTGGATCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLMVCFL*ILDQMF
Trigger: AAACATCTGATCCAGAATCCAGAGAAAACATACCAT...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTAAGAGAGATGCTCTTTaGAATCTATTTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTKRDAL*NLFLPD
Trigger: ATCTGGAAGAAATAGATTCCAAAGAGCATCTCTCTT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACTCTTTCTGCTGCAGTaGTTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQLFLLQ*FFFGQT
Trigger: GGTTTGACCAAAGAAGAATCACTGCAGCAGAAAGAG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATTTCTGTTGCTGCAATaGGAGGAACAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEFLLLQ*EEQLSP
Trigger: GGGAGAGAGCTGTTCCTCTCATTGCAGCAACAGAAA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAGGAGGTGTCCAATGTaGAATGCAGCTCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQERRCPM*NAALRL
Trigger: CAACCTGAGAGCTGCATTTCACATTGGACACCTCCT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQFLQSF*LYDLQN
Trigger: ATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAATCTTTAGCAACCCCTaGTTGTTCTGGCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LSSKDTETGQELGRGQIQIFSNP*LFWLLF
Trigger: AAACAGGAGCCAGAACAAGCAGGGGTTGCTAAAGAT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATATTCCTTCTGGATCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEYSFWI*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGATCCAGAAGGAATA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGGCTGCATGCACATTaGAGAGAGATGCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSRLHAH*REMLST
Trigger: AGTAGAAAGCATCTCTCTCCAATGTGCATGCAGCCT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGAGCAGGATGCATTTaGAGATGTTTCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSRAGCI*RCFIQR
Trigger: TCTCTGGATGAAACATCTTCAAATGCATCCTGCTCT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTTGCATCTCATGAGTaGATTCACCATCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQELASHE*IHHQQG
Trigger: GCCTTGCTGATGGTGAATTCACTCATGAGATGCAAG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR TCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAGTATCTTTAGAGAGTaGGACGTCTGGTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQESIFRE*DVWCST
Trigger: AGTGCTGCACCAGACGTCTCACTCTCTAAAGATACT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATCCATCCACTGTAGCTaGATTTCTAGACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQESIHCS*ISRPLH
Trigger: GTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCATCCCTCAAAAATGTCTaGTCTGTCTTGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSSLKNV*SVLMLS
Trigger: TGACAGCATCAAGACAGAGCAGACATTTTTGAGGGA...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATCTCTGAGGGAATGGTaGGTCCTTGATCTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQESLREW*VLDLLY
Trigger: GTAGAGAAGATCAAGGACCCACCATTCCCTCAGAGA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQESASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAATCTTTAGCAACCCCTaGTTGTTCTGGCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEIFSNP*LFWLLF
Trigger: AAACAGGAGCCAGAACAAGCAGGGGTTGCTAAAGAT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCACTCTTTCAATGTTTGTaGAGAACCAGGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSLFQCL*RTRVDS
Trigger: AGAATCAACCCTGGTTCTGCACAAACATTGAAAGAG...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGCTTTTCTGTTCTCTaGATCTGCCTTAATAGGATC +
Preference number: 4 (lower is better)
Translates to: FGKETSEHTTWTWPILNSSFSVL*ICLNRI
Trigger: GATCCTATTAAGGCAGATGCAGAGAACAGAAAAGCT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAATGCTTTCTACTGCACTaGTGTCAGCGAACATTTGTA +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQECFLLH*CQRTFV
Trigger: TACAAATGTTCGCTGACAGCAGTGCAGTAGAAAGCA...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR GCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAGCTTTTCTGTTCTCTaGATCTGCCTTAATAGGATC +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQESFSVL*ICLNRI
Trigger: GATCCTATTAAGGCAGATGCAGAGAACAGAAAAGCT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CCA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAATATTATCAAAGGCCTaGTCACTTCCTCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEILSKA*SLPPPN
Trigger: ATTAGGAGGAGGAAGTGACCAGGCCTTTGATAATAT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
3UTR CAA 72 bp CAGCACTATAAATCTCATGGGGAGGCAAAATTTATCTaGTCTAGAGAGAGAGAGTTCATTATATCAGTGATA +
Preference number: 4 (lower is better)
Translates to: QHYKSHGEAKFI*SREREFIISVI
Trigger: TATCACTGATATAATGAACTCTCTCTCTCTAGACAAGATAAATTTTGCCTCCCCATGAGATTTATAGTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CGGCCTGGCCTCGAATGGCACTGTTGCCCAAGGCCAGAGAACCGCTaGTGCTGCTCGATGGACTGCCACTCTCGCCATCTGCGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RPGLEWHCCPRPENR*CCSMDCHSRHLRGG
Trigger: GCCGCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGGCCAGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CCTGGCCTCGAATGGCACTGTTGCCCAAGGCCAGAGAACCGCTGCTaGTGCTCGATGGACTGCCACTCTCGCCATCTGCGTGGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGLEWHCCPRPENRC*CSMDCHSRHLRGGL
Trigger: CAGGCCGCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CCCTGGGCTCAGGGTGGCCACAGGCCTCACTACCATCACCACTGCTaGTGTCTCTGCCACCTCCCTCATCGATGGCCCCACTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: PWAQGGHRPHYHHHC*CLCHLPHRWPHCHL
Trigger: GAGGTGGCAGTGGGGCCATCGATGAGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTGAGGCCTGTGGCCACCCTGAGCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CTCCCCTGGGCTCAGGGTGGCCACAGGCCTCACTACCATCACCACTaGTGCTGTCTCTGCCACCTCCCTCATCGATGGCCCCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: LPWAQGGHRPHYHHH*CCLCHLPHRWPHCH
Trigger: GTGGCAGTGGGGCCATCGATGAGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTGAGGCCTGTGGCCACCCTGAGCCCAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GGCCTCGAATGGCACTGTTGCCCAAGGCCAGAGAACCGCTGCTGCTaGTCGATGGACTGCCACTCTCGCCATCTGCGTGGCGGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: GLEWHCCPRPENRCC*SMDCHSRHLRGGLR
Trigger: TCTCAGGCCGCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GTAACCTCTCGCCCCTCGGGCCTGCAAAGCACGGGCTTTAATGTCTaGGAGGGTCCTGGCACCAGTCCAACCCCGGCAGGAGGACTCCGT +
Preference number: 5 (lower is better)
Translates to: VTSRPSGLQSTGFNV*EGPGTSPTPAGGLR
Trigger: ACGGAGTCCTCCTGCCGGGGTTGGACTGGTGCCAGGACCCTCGCAGACATTAAAGCCCGTGCTTTGCAGGCCCGAGGGGCGAGAGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CACTGTTGCCCAAGGCCAGAGAACCGCTGCTGCTGCTCGATGGACTaGCACTCTCGCCATCTGCGTGGCGGCCTGAGAATCCTGACGCAG +
Preference number: 5 (lower is better)
Translates to: HCCPRPENRCCCSMD*HSRHLRGGLRILTQ
Trigger: CTGCGTCAGGATTCTCAGGCCGCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GCAGTAGTTGTGTTCGCTGTAGATCTGACGCACTCTCTCCAGAGGTaGTTGGGGCTCCCCTGGGCTCAGGGTGGCCACAGGCCTCACTAC +
Preference number: 5 (lower is better)
Translates to: AVVVFAVDLTHSLQR*LGLPWAQGGHRPHY
Trigger: GTAGTGAGGCCTGTGGCCACCCTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGAGTGCGTCAGATCTACAGCGAACACAACTACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp TCGCCATCTGCGTGGCGGCCTGAGAATCCTGACGCAGGTTCCACGTaGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACACGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: SPSAWRPENPDAGST*APFTFRGVRTTRGS
Trigger: GCTACCTCGTGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAACCTGCGTCAGGATTCTCAGGCCGCCACGCAGATGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp GTTCGGAGATCTGGCCGAGAACGTTTCTTAAAATGTCCGTCCCGTTaGCGGGTGTTGGGCCCACGCTGCGGCCGCACAGACTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VRRSGRERFLKCPSR*RVLGPRCGRTDSPE
Trigger: CTCTGGAGAGTCTGTGCGGCCGCAGCGTGGGCCCAACACCCGTCAACGGGACGGACATTTTAAGAAACGTTCTCGGCCAGATCTCCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp CTGTCTGGAGATGCAGAGGCACATGCCAAGTTGTCCCTTTCTGCTTaGATCTGGGAAGCCACAGGTTCACTGGGACACTTGGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGDAEAHAKLSLSA*IWEATGSLGHLGPS
Trigger: GGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCTCCAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTCTCTCCAGAGGTGCTaGGGGCTCCCCTGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDSLQRC*GLPWAQ
Trigger: CTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTCTCTCCAGAGGTGCTaGGGGCTCCCCTGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLSLQRC*GLPWAQ
Trigger: CTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GAGTCTTCTCTTCTGGCTCTGGGCATGGCAGCTTCAGCTGGAGTGTaGTCTCCATTCAGAGGACAAGGCGGCAGTAGTTGTGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: ESSLLALGMAASAGV*SPFRGQGGSSCVRC
Trigger: ACAGCGAACACAACTACTGCCGCCTTGTCCTCTGAATGGAGAGCACACTCCAGCTGAAGCTGCCATGCCCAGAGCCAGAAGAGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GGCAGGAGGAGGAGGAGTTGCTGCTGGAAGTGTAGTGGCAGGGCATaGAAGGTCCGAGAGTTTATCAGAGCACGGAGGTTGGTGTTAACA +
Preference number: 5 (lower is better)
Translates to: GRRRRSCCWKCSGRA*KVREFIRARRLVLT
Trigger: TGTTAACACCAACCTCCGTGCTCTGATAAACTCTCGGACCTTCCATGCCCTGCCACTACACTTCCAGCAGCAACTCCTCCTCCTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTGGGAGCAATAGGGGGTaGAGAGGCATCTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSGSNRG*RGIFQP
Trigger: GGGCTGGAAGATGCCTCTCAACCCCCTATTGCTCCC...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCCTCGGCCACTGGAGTTaGGGAGGACAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLLGHWS*GGQRGQ
Trigger: TTGCCCCCTCTGTCCTCCCAAACTCCAGTGGCCGAG...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp CACGCTGCGGCCGCACAGACTCTCCAGAGACACATAAACCACTCTTaGCTTTGGCCTCCTCCTGGACCTCTTTCTGCTGCAGTGATTCTT +
Preference number: 5 (lower is better)
Translates to: HAAAAQTLQRHINHS*LWPPPGPLSAAVIL
Trigger: AAGAATCACTGCAGCAGAAAGAGGTCCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTGTCTCTGGAGAGTCTGTGCGGCCGCAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp TGGGACCCTCTTCAACAGGCAGCTCTCTTCCTTTCTGAGAGAAGCTaGGTCTTCTCTTCTGGCTCTGGGCATGGCAGCTTCAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: WDPLQQAALFLSERS*VFSSGSGHGSFSWS
Trigger: ACTCCAGCTGAAGCTGCCATGCCCAGAGCCAGAAGAGAAGACTCAGCTTCTCTCAGAAAGGAAGAGAGCTGCCTGTTGAAGAGGGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp CTCAGTACTGGACAGCAACAGAGAGTCTGGGATCTTGTGTGGGACTaGACATACTCTAGACACCCAGCTCTGAGAAGCAGCCACCCCTCC +
Preference number: 5 (lower is better)
Translates to: LSTGQQQRVWDLVWD*TYSRHPALRSSHPS
Trigger: GGAGGGGTGGCTGCTTCTCAGAGCTGGGTGTCTAGAGTATGTTCAGTCCCACACAAGATCCCAGACTCTCTGTTGCTGTCCAGTACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GATTCTGTCTGGAGATGCAGAGGCACATGCCAAGTTGTCCCTTTCTaGTTGGATCTGGGAAGCCACAGGTTCACTGGGACACTTGGGACC +
Preference number: 5 (lower is better)
Translates to: DSVWRCRGTCQVVPF*LDLGSHRFTGTLGT
Trigger: GGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCTCCAGACAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GGTGCTTCAGAGATGCCATTCATTTCCAGTCTTTCAAGGTCCACTTaGTCACTGTCACTGCCAGTGCTGCCCACAGCTGCTGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: GASEMPFISSLSRST*SLSLPVLPTAAGGG
Trigger: ACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCATCTCTGAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CCTGGAGGAAGAACCTTCTCCAAGGGCAAATTACCATGCAGCAGGTaGATCACAAGTGGGTTGGTAACCTCCACTGAAGAGCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PGGRTFSKGKLPCSR*ITSGLVTSTEEPGL
Trigger: GAGGCCTGGCTCTTCAGTGGAGGTTACCAACCCACTTGTGATGCACCTGCTGCATGGTAATTTGCCCTTGGAGAAGGTTCTTCCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp CATCTTCGCAATCTTCTGGGACATTGCAGGAGCCTTGGAGGCCATTaGCCTGACAAGACCAGCACTTGCTCCATAGCTCTGGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: HLRNLLGHCRSLGGH*PDKTSTCSIALGQN
Trigger: ATTCTGGCCCAGAGCTATGGAGCAAGTGCTGGTCTTGTCAGGGCAATGGCCTCCAAGGCTCCTGCAATGTCCCAGAAGATTGCGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GCTGGCTTCATTAGACCCACAGCTTTCCACATCAGCGGAGTCCTCTaGCTCGTCTCCATCCACTGTAGCTGCATTTCTAGACCACTGCAC +
Preference number: 5 (lower is better)
Translates to: AGFIRPTAFHISGVL*LVSIHCSCISRPLH
Trigger: GTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGAGACGAGCCAGAGGACTCCGCTGATGTGGAAAGCTGTGGGTCTAATGAAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp TGTAAGGACAGTGATGCAGTGTGGCCTGTACCAAAGCTGGCTTTGTaGCTCAGCTGCACCACACCACCAGCAAGGCCTTTGGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: CKDSDAVWPVPKLAL*LSCTTPPARPLGKV
Trigger: TACCTTTCCCAAAGGCCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACTGTCCTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp CGAACATTTGTAAGGACAGTGATGCAGTGTGGCCTGTACCAAAGCTaGCTTTGTGGCTCAGCTGCACCACACCACCAGCAAGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RTFVRTVMQCGLYQS*LCGSAAPHHQQGLW
Trigger: CCAAAGGCCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACTGTCCTTACAAATGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCCTCGAATGGCACTGTaGCCCAAGGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNPRMAL*PKAREP
Trigger: CGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTTCACTGGGACACTaGGGACCCTCCTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGGSLGH*GPSCPD
Trigger: ATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAACC...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACGGGAGCAATAGGGGGTaGAGAGGCATCTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNGSNRG*RGIFQP
Trigger: GGGCTGGAAGATGCCTCTCAACCCCCTATTGCTCCC...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATGTGCAGAACCAGGGTaGATTCTGGCAGCTAGGCGA +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSCAEPG*ILAARR
Trigger: TCGCCTAGCTGCCAGAATCAACCCTGGTTCTGCACA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp TTTCCAGTCTTTCAAGGTCCACTTGCTCACTGTCACTGCCAGTGCTaGCCACAGCTGCTGGAGGAGGTGTCCAATGTGAAATGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: FPVFQGPLAHCHCQC*PQLLEEVSNVKCSS
Trigger: AGAGCTGCATTTCACATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp TCATTTCCAGTCTTTCAAGGTCCACTTGCTCACTGTCACTGCCAGTaGTGCCCACAGCTGCTGGAGGAGGTGTCCAATGTGAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: SFPVFQGPLAHCHCQ*CPQLLEEVSNVKCS
Trigger: GCTGCATTTCACATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp AATAGGGGGTTGAGAGGCATCTTCCAGCCCACTTGTAAGCACACCTaGGACCCTCTTCAACAGGCAGCTCTCTTCCTTTCTGAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NRGLRGIFQPTCKHT*DPLQQAALFLSERS
Trigger: GCTTCTCTCAGAAAGGAAGAGAGCTGCCTGTTGAAGAGGGTCCCAGGTGTGCTTACAAGTGGGCTGGAAGATGCCTCTCAACCCCCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp ACTGCACTGCTGTCAGCGAACATTTGTAAGGACAGTGATGCAGTGTaGCCTGTACCAAAGCTGGCTTTGTGGCTCAGCTGCACCACACCA +
Preference number: 5 (lower is better)
Translates to: TALLSANICKDSDAV*PVPKLALWLSCTTP
Trigger: TGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACTGTCCTTACAAATGTTCGCTGACAGCAGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACCTCGAATGGCACTGTaGCCCAAGGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARPRMAL*PKAREP
Trigger: CGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCCTCCTGTCCAGATGTaGCTGAGGACACATCTGGCC +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNPPVQM*LRTHLA
Trigger: GGCCAGATGTGTCCTCAGCAACATCTGGACAGGAGG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGTTGTCCCTTTCTGCTaGGATCTGGGAAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGVVPFC*DLGSHR
Trigger: CCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAAC...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGACATTGCAGGAGCCTaGGAGGCCATTGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLDIAGA*EAIALT
Trigger: TGTCAGGGCAATGGCCTCCAAGGCTCCTGCAATGTC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGTACCAAAGCTGGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGVPKLA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTAC...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp ATGAGTGAATTCACCATCAGCAAGGCGTTCTCGCCAGCTCTGAGCTaGATGGGTGAAAAACTCATTATTGAGTGCACTGCCGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: MSEFTISKAFSPALS*MGEKLIIECTAAEA
Trigger: CGCCTCAGCGGCAGTGCACTCAATAATGAGTTTTTCACCCATGCAGCTCAGAGCTGGCGAGAACGCCTTGCTGATGGTGAATTCACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp TGCCATTCATTTCCAGTCTTTCAAGGTCCACTTGCTCACTGTCACTaGCAGTGCTGCCCACAGCTGCTGGAGGAGGTGTCCAATGTGAAA +
Preference number: 5 (lower is better)
Translates to: CHSFPVFQGPLAHCH*QCCPQLLEEVSNVK
Trigger: TTTCACATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GCTAGGCGATTGTTTTCCCCTGTACCTTGTAGAGTGCCTCTATCCTaGCTCTGTTCTCTAAGTGGCAGCTGTGATGACTCTAGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: ARRLFSPVPCRVPLS*LCSLSGSCDDSSRL
Trigger: CAGCCGACTAGAGTCATCACAGCTGCCACTTAGAGAACAGAGCCAGGATAGAGGCACTCTACAAGGTACAGGGGAAAACAATCGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACACCTCTTCCCCTCTGTaGCGCTTCATTTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNTSSPL*RFICPV
Trigger: CACAGGGCAAATGAAGCGCAACAGAGGGGAAGAGGT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACCTCCTGTCCAGATGTaGCTGAGGACACATCTGGCC +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARPPVQM*LRTHLA
Trigger: GGCCAGATGTGTCCTCAGCAACATCTGGACAGGAGG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACGTTGTCCCTTTCTGCTaGGATCTGGGAAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDVVPFC*DLGSHR
Trigger: CCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAAC...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCAATCTTCTGGGACATaGCAGGAGCCTTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDQSSGT*QEPWRP
Trigger: TGGCCTCCAAGGCTCCTGCAATGTCCCAGAAGATTG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGTACCAAAGCTGGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLVPKLA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTAC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp TGTTCTCTAAGTGGCAGCTGTGATGACTCTAGTCGGCTGCTTCTGTaGCCTGGAGGAAGAACCTTCTCCAAGGGCAAATTACCATGCAGC +
Preference number: 5 (lower is better)
Translates to: CSLSGSCDDSSRLLL*PGGRTFSKGKLPCS
Trigger: GCTGCATGGTAATTTGCCCTTGGAGAAGGTTCTTCCTCCAGGTCACAGAAGCAGCCGACTAGAGTCATCACAGCTGCCACTTAGAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp GAGGCACGCAAGAGGGGATGTCCCACTCATTTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAATCTGTTTTGGTGTCATTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: EARKRGCPTHFLQSF*LYDLQNLFWCHWSI
Trigger: GATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGTGGGACATCCCCTCTTGCGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGAATGTAGCATGGCATaGAGGCACGCAAGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTECSMA*RHARGD
Trigger: ATCCCCTCTTGCGTGCCTCAATGCCATGCTACATTC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCGCCCTTCTCCTCCTCTaGAGTTGGAATGTAGCATGG +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLALLLL*SWNVAW
Trigger: CCATGCTACATTCCAACTCAAGAGGAGGAGAAGGGC...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAATCAGAGCACGGAGGTaGGTGTTAACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSIRARR*VLTRMD
Trigger: GTCCATTCTTGTTAACACCAACCTCCGTGCTCTGAT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACAAACCACTCTTGACTTaGGCCTCCTCCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNKPLLT*ASSWTS
Trigger: AGAGGTCCAGGAGGAGGCCAAAGTCAAGAGTGGTTT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTGTGCAGAACCAGGGTaGATTCTGGCAGCTAGGCGA +
Preference number: 5 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANCAEPG*ILAARR
Trigger: TCGCCTAGCTGCCAGAATCAACCCTGGTTCTGCACA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACAATCTTCTGGGACATaGCAGGAGCCTTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARQSSGT*QEPWRP
Trigger: TGGCCTCCAAGGCTCCTGCAATGTCCCAGAAGATTG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp AAAACAGCCCTTCTCCTCCTCTTGAGTTGGAATGTAGCATGGCATTaGGGCACGCAAGAGGGGATGTCCCACTTCTCATTTCCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: KTALLLLLSWNVAWH*GTQEGMSHFSFPSV
Trigger: GACTGAAGGAAATGAGAAGTGGGACATCCCCTCTTGCGTGCCTCAATGCCATGCTACATTCCAACTCAAGAGGAGGAGAAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS TCA 90 bp AAAACAGCCCTTCTCCTCCTCTTGAGTTGGAATGTAGCATGGCATTaGGGCACGCAAGAGGGGATGTCCCACTCATTTCCTTCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: KTALLLLLSWNVAWH*GTQEGMSHSFPSVL
Trigger: AAGGACTGAAGGAAATGAGTGGGACATCCCCTCTTGCGTGCCTCAATGCCATGCTACATTCCAACTCAAGAGGAGGAGAAGGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS GCA 90 bp GCACGCAAGAGGGGATGTCCCACTTCTCATTTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAATCTGTTTTGGTGTCATTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: ARKRGCPTSHFLQSF*LYDLQNLFWCHWSI
Trigger: GATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGAAGTGGGACATCCCCTCTTGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS GCA 90 bp TCCTCTGGCTCGTCTCCATCCACTGTAGCTGCATTTCTAGACCACTaGACTGCATCTTTCTTGAGTGTGAAAAGACTAATGCGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SSGSSPSTVAAFLDH*TASFLSVKRLMRPG
Trigger: ACCTGGCCGCATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGAGACGAGCCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 90 bp TTCCACATCAGCGGAGTCCTCTGGCTCGTCTCCATCCACTGTAGCTaGATTTCTAGACCACTGCACTGCATCTTTCTTGAGTGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: FHISGVLWLVSIHCS*ISRPLHCIFLECEK
Trigger: CTTTTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGAGACGAGCCAGAGGACTCCGCTGATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp TTGAATCCGGATGGGCGGGACTTTGGGCTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACTTTCAATTGTGTTACGAAAGGACTG +
Preference number: 5 (lower is better)
Translates to: LNPDGRDFGLLFSGL*LFGVNTFNCVTKGL
Trigger: CAGTCCTTTCGTAACACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCGGATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp TGCTGTCCTCAGAGAGATGGCCTTCGGAGTCAGAGGCTGTATCTGTaGATTCACTGTGAGGACTTGGTGCTTCAGAGATGCCATTCATTT +
Preference number: 5 (lower is better)
Translates to: CCPQRDGLRSQRLYL*IHCEDLVLQRCHSF
Trigger: AAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACTCCGAAGGCCATCTCTCTGAGGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCTG +
Preference number: 5 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSPAESV*VSLEHL
Trigger: CAGATGCTCCAATGACACCAAAACAGATTCTGCAGG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATGCCCTTCTCCTCCTCTaGAGTTGGAATGTAGCATGG +
Preference number: 5 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANALLLL*SWNVAW
Trigger: CCATGCTACATTCCAACTCAAGAGGAGGAGAAGGGC...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTATCAGAGCACGGAGGTaGGTGTTAACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGIRARR*VLTRMD
Trigger: GTCCATTCTTGTTAACACCAACCTCCGTGCTCTGAT...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACACACATAAACCACTCTaGACTTTGGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDTHKPL*TLASSW
Trigger: CCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTGT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCACTCGGCCACTGGAGTTaGGGAGGACAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSLGHWS*GGQRGQ
Trigger: TTGCCCCCTCTGTCCTCCCAAACTCCAGTGGCCGAG...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAATGCAGCTCTCAGGTaGGGGCACACTTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARNAALR*GHTFCC
Trigger: GCAACAGAAAGTGTGCCCCAACCTGAGAGCTGCATT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATAATGCAGCTCTCAGGTaGGGGCACACTTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANNAALR*GHTFCC
Trigger: GCAACAGAAAGTGTGCCCCAACCTGAGAGCTGCATT...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAAGGTCATTGTTCACCTaGGACAGTGAGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARRSLFT*DSEADG
Trigger: CCCATCTGCCTCACTGTCCAAGGTGAACAATGACCT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTGCATCACAAGTGGGTaGGTAACCTCCACTGAAGAG +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDCITSG*VTSTEE
Trigger: CTCTTCAGTGGAGGTTACCAACCCACTTGTGATGCA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCATCTATTTCTTCCAGATaGCCAGAGGAAGGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSSISSR*PEEGVS
Trigger: ACTGACACCTTCCTCTGGCAATCTGGAAGAAATAGA...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCAGGAGAGGCTCACATTaGTGGAGGAGAAACATGGCA +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLRRGSH*WRRNMA
Trigger: TGCCATGTTTCTCCTCCACAAATGTGAGCCTCTCCT...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCTGCTTGATGTTGAGTaGGGAAGGGATGGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDLLDVE*GRDGRR
Trigger: CCTTCTTCCATCCCTTCCCAACTCAACATCAAGCAG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTAAGGCCTGCTTGATGTaGAGTTGGGAAGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTKACLM*SWEGME
Trigger: TTCCATCCCTTCCCAACTCAACATCAAGCAGGCCTT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCAGGCTGCATGCACATaGGAGAGAGATGCTTTCTAC +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNQAACT*ERDAFY
Trigger: GTAGAAAGCATCTCTCTCCAATGTGCATGCAGCCTG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp GAGAGATGGCCTTCGGAGTCAGAGGCTGTATCTGTGGATTCACTGTaGGGACTTGGTGCTTCAGAGATGCCATTCATTTCCAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ERWPSESEAVSVDSL*GLGASEMPFISSLS
Trigger: TGAAAGACTGGAAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACTCCGAAGGCCATCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GTTGCTGCAATGAGAGGAACAGCTCTCTCCCACTCTTTTTCATCCTaGGGCTCCGGACATGGTATGTTTTCTCTGGATTCTGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: VAAMRGTALSHSFSS*GSGHGMFSLDSGSD
Trigger: ATCTGATCCAGAATCCAGAGAAAACATACCATGTCCGGAGCCCCAGGATGAAAAAGAGTGGGAGAGAGCTGTTCCTCTCATTGCAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GTTTTCCCTTGTAGTTTGCACACCACCAGACACAGAGTTTTTGCTTaGTTCTATCTTCCTACTGGGAAACACTGGAGGGACCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VFPCSLHTTRHRVFA*FYLPTGKHWRDLSR
Trigger: CCTGCTGAGGTCCCTCCAGTGTTTCCCAGTAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTGGTGGTGTGCAAACTACAAGGGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp CAAAAATGTCTGCTCTGTCTTGATGCTGTCAGCAGAGACAGGAGGTaGTTTGGGCATCCTGTTTTCCCTTGTAGTTTGCACACCACCAGA +
Preference number: 5 (lower is better)
Translates to: QKCLLCLDAVSRDRR*FGHPVFPCSLHTTR
Trigger: TCTGGTGGTGTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCCTGTCTCTGCTGACAGCATCAAGACAGAGCAGACATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTCTCCTCCTCTTGAGTaGGAATGTAGCATGGCATTG +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNSPPLE*ECSMAL
Trigger: CAATGCCATGCTACATTCCAACTCAAGAGGAGGAGA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACATTCACTGTGAGGACTaGGTGCTTCAGAGATGCCAT +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNIHCED*VLQRCH
Trigger: ATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAAT...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTTCTATTTCTTCCAGATaGCCAGAGGAAGGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSSISSR*PEEGVS
Trigger: ACTGACACCTTCCTCTGGCAATCTGGAAGAAATAGA...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAACACAGAGTTTTTGCTaGGTTCTATCTTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSTQSFC*VLSSYW
Trigger: CCAGTAGGAAGATAGAACCAAGCAAAAACTCTGTGT...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTAATGTCTGCTCTGTCTaGATGCTGTCAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTNVCSV*MLSAET
Trigger: TGTCTCTGCTGACAGCATCAAGACAGAGCAGACATT...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp GAGGGGATGTCCCACTTCTCATTTCCTTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTGGTGTCATTGGAGCATCTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: EGMSHFSFPSVLLPL*PAESVLVSLEHLSS
Trigger: ACTACTCAGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGAAGTGGGACATCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS TCA 90 bp ATGCAAAAGCCTCAGTCAAAGCTTCTTGTCTACTACTTTCCCTTATaGGTAGGCCTGTGGCACCAAGCCCTAATCCATCATCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: MQKPQSKLLVYYFPL*VGLWHQALIHHHQA
Trigger: GGCCTGATGATGATGGATTAGGGCTTGGTGCCACAGGCCTACTCATAAGGGAAAGTAGTAGACAAGAAGCTTTGACTGAGGCTTTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp CAAGAGGGGATGTCCCACTCATTTCCTTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTGGTGTCATTGGAGCATCTGAGTAGT +
Preference number: 5 (lower is better)
Translates to: QEGMSHSFPSVLLPL*PAESVLVSLEHLSS
Trigger: ACTACTCAGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGTGGGACATCCCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS GCA 90 bp GCAGAGACAGGAGGTGGTTTGGGCATCCTGTTTTCCCTTGTAGTTTaGACACCACCAGACACAGAGTTTTTGCTTGGTTCTATCTTCCTA +
Preference number: 5 (lower is better)
Translates to: AETGGGLGILFSLVV*TPPDTEFLLGSIFL
Trigger: TAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTGGTGGTGTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCCTGTCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp GACTCTCCAGAGACACATAAACCACTCTTGACTTTGGCCTCCTCCTaGACCTCTTTCTGCTGCAGTGATTCTTCTTTGGTCAAACCCAAT +
Preference number: 5 (lower is better)
Translates to: DSPETHKPLLTLASS*TSFCCSDSSLVKPN
Trigger: ATTGGGTTTGACCAAAGAAGAATCACTGCAGCAGAAAGAGGTCCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTGTCTCTGGAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCTG +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARPAESV*VSLEHL
Trigger: CAGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAGTCCTTTTCTTCTGTTaGTTTGCCTGTGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARVLFFC*FACEEA
Trigger: GGCTTCCTCACAGGCAAACAAACAGAAGAAAAGGAC...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAACGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLNKDSQLSSKDTETGQERMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GAGACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCACTCAGTCAAAGCTTCTaGTCTACTACTTTCCCTTAT +
Preference number: 5 (lower is better)
Translates to: ETYKSSAFLSSPMDQTLSLSQSF*STTFPY
Trigger: ATAAGGGAAAGTAGTAGACAAGAAGCTTTGACTGAG...TGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGAATTCACTGTGAGGACTaGGTGCTTCAGAGATGCCAT +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARIHCED*VLQRCH
Trigger: ATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAAT...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAGACATTGCAGGAGCCTaGGAGGCCATTGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQDIAGA*EAIALT
Trigger: TGTCAGGGCAATGGCCTCCAAGGCTCCTGCAATGTC...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTACACAGAGTTTTTGCTaGGTTCTATCTTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSTQSFC*VLSSYW
Trigger: CCAGTAGGAAGATAGAACCAAGCAAAAACTCTGTGT...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp ACATACAAGAGCAGCGCTTTTCTGAGCAGCCCCATGGACCAGACACTGTCAAGTCCAGACACAGAGTTTTaGCTTGGTTCTATCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TYKSSAFLSSPMDQTLSSPDTEF*LGSIFL
Trigger: TAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTGG...ACTTGACAGTGTCTGGTCCATGGGGCTGCTCAGAAAAGCGCTGCTCTTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAACCTCTTCCCCTCTGTaGCGCTTCATTTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQTSSPL*RFICPV
Trigger: CACAGGGCAAATGAAGCGCAACAGAGGGGAAGAGGT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GTCTGGGGTCGTCCAAGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: VWGRPRNSPMNPEALNTGCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCTTGGACGACCCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACCCAGACACAGAGTTTTaGCTTGGTTCTATCTTCCTA +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDPDTEF*LGSIFL
Trigger: TAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTGG...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACACAATACACAGAGCTTaGAAGGTCCAATGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDTIHRA*KVQCSH
Trigger: ATGACTGCATTGGACCTTCAAAGCTCTGTGTATTGT...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 90 bp ATTGGAGAGGGGTCGGCTCTGAGACTCTGTAGAGCAGGATGCATTTaGAGATGTTTCATCCAGAGATACATCATTTTCACCACTCACAGT +
Preference number: 5 (lower is better)
Translates to: IGEGSALRLCRAGCI*RCFIQRYIIFTTHS
Trigger: ACTGTGAGTGGTGAAAATGATGTATCTCTGGATGAAACATCTTCAAATGCATCCTGCTCTACAGAGTCTCAGAGCCGACCCCTCTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACTCTGTTTTGGTGTCATaGGAGCATCTGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNSVLVS*EHLSSF
Trigger: AAAACTACTCAGATGCTCCAATGACACCAAAACAGA...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTGCACTGCATCTTTCTaGAGTGTGAAAAGACTAATG +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTCTASF*SVKRLM
Trigger: CATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTTGCAGTGATTCTTCTTaGGTCAAACCCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTCSDSS*VKPNFC
Trigger: ACAGAAATTGGGTTTGACCAAAGAAGAATCACTGCA...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAAAACCACTCTTGACTTaGGCCTCCTCCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQKPLLT*ASSWTS
Trigger: AGAGGTCCAGGAGGAGGCCAAAGTCAAGAGTGGTTT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CCAATACTGAATTCACTACCGGCTCCTCACTCATACCTGATGGGTTCCCCAAACCTCAGTCAAAGCTTCTaGTCTACTACTTTCCCTTAT +
Preference number: 5 (lower is better)
Translates to: PILNSLPAPHSYLMGSPNLSQSF*STTFPY
Trigger: ATAAGGGAAAGTAGTAGACAAGAAGCTTTGACTGAG...GTTTGGGGAACCCATCAGGTATGAGTGAGGAGCCGGTAGTGAATTCAGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAAGGTCATTGTTCACCTaGGACAGTGAGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSRSLFT*DSEADG
Trigger: CCCATCTGCCTCACTGTCCAAGGTGAACAATGACCT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TATGATGGGTGGGTGGCAAGCAGGAGTCACCTGCAAACATCTGTACAGTTGACTGAAGAGAGATGCTCTTaGGAATCTATTTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: YDGWVASRSHLQTSVQLTEERCS*ESISSR
Trigger: TCTGGAAGAAATAGATTCCAAAGAGCATCTCTCTTC...AGTCAACTGTACAGATGTTTGCAGGTGACTCCTGCTTGCCACCCACCCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 90 bp AAAGTAGGTGTCATACTTACAGGCTCCTTCATATTATCAAAGGCCTaGTCACTTCCTCCTCCTAATAGATCTCCCAATGGAAACCGTCCA +
Preference number: 5 (lower is better)
Translates to: KVGVILTGSFILSKA*SLPPPNRSPNGNRP
Trigger: TGGACGGTTTCCATTGGGAGATCTATTAGGAGGAGGAAGTGACCAGGCCTTTGATAATATGAAGGAGCCTGTAAGTATGACACCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AGAAGCCTAGCAATCCCCAATATTGCTTTGACATGTGATGACCCTGGAGCCAGATCTGTTTTGGTGTCATaGGAGCATCTGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: RSLAIPNIALTCDDPGARSVLVS*EHLSSF
Trigger: AAAACTACTCAGATGCTCCAATGACACCAAAACAGA...TCTGGCTCCAGGGTCATCACATGTCAAAGCAATATTGGGGATTGCTAGGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AACTGGGTGAAGCACCAGAACCAAAGGTCAACTTGGCTCCATCAACTGGCAAATTGCACTGCATCTTTCTaGAGTGTGAAAAGACTAATG +
Preference number: 5 (lower is better)
Translates to: NWVKHQNQRSTWLHQLANCTASF*SVKRLM
Trigger: CATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCA...ATTTGCCAGTTGATGGAGCCAAGTTGACCTTTGGTTCTGGTGCTTCACCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAAACACATAAACCACTCTaGACTTTGGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQTHKPL*TLASSW
Trigger: CCAGGAGGAGGCCAAAGTCAAGAGTGGTTTATGTGT...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GACCAGACACTGTCAAGTTTCTCTTCTGAGACCTCAGAGGTCTCAGAAGAGGACTCTGGCTCCTGTTTTTaGTATATATTCCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: DQTLSSFSSETSEVSEEDSGSCF*YIFLLD
Trigger: ATCCAGAAGGAATATATACAAAAAACAGGAGCCAGA...GTCCTCTTCTGAGACCTCTGAGGTCTCAGAAGAGAAACTTGACAGTGTCTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp GCAGCCACTCAGGGCTGGAAGAAAAGAGATACAAGGAACAAGACACGTTTGCTCTCTGGCTCCTGTTTTTaGTATATATTCCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: AATQGWKKRDTRNKTRLLSGSCF*YIFLLD
Trigger: ATCCAGAAGGAATATATACAAAAAACAGGAGCCAGA...GAGCAAACGTGTCTTGTTCCTTGTATCTCTTTTCTTCCAGCCCTGAGTGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATGCATCACAAGTGGGTaGGTAACCTCCACTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQCITSG*VTSTEE
Trigger: CTCTTCAGTGGAGGTTACCAACCCACTTGTGATGCA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAACTGCTTGATGTTGAGTaGGGAAGGGATGGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQLLDVE*GRDGRR
Trigger: CCTTCTTCCATCCCTTCCCAACTCAACATCAAGCAG...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCACAGGCTGCATGCACATaGGAGAGAGATGCTTTCTAC +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSQAACT*ERDAFY
Trigger: GTAGAAAGCATCTCTCTCCAATGTGCATGCAGCCTG...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAGGAGAGGCTCACATTaGTGGAGGAGAAACATGGCA +
Preference number: 5 (lower is better)
Translates to: KLNKDSQLSSKDTETGQERRGSH*WRRNMA
Trigger: TGCCATGTTTCTCCTCCACAAATGTGAGCCTCTCCT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAAGGCCTGCTTGATGTaGAGTTGGGAAGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEKACLM*SWEGME
Trigger: TTCCATCCCTTCCCAACTCAACATCAAGCAGGCCTT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAGTCCTTTTCTTCTGTTaGTTTGCCTGTGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KLNKDSQLSSKDTETGQEVLFFC*FACEEA
Trigger: GGCTTCCTCACAGGCAAACAAACAGAAGAAAAGGAC...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp AAATTAAACAAGGACTCCCAACTTTCAAGTAAAGATACAGAAACAGGGCAGGAAAATGTCTGCTCTGTCTaGATGCTGTCAGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: KLNKDSQLSSKDTETGQENVCSV*MLSAET
Trigger: TGTCTCTGCTGACAGCATCAAGACAGAGCAGACATT...TTCCTGCCCTGTTTCTGTATCTTTACTTGAAAGTTGGGAGTCCTTGTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAACAATACACAGAGCTTaGAAGGTCCAATGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSTIHRA*KVQCSH
Trigger: ATGACTGCATTGGACCTTCAAAGCTCTGTGTATTGT...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCATGCAGTGATTCTTCTTaGGTCAAACCCAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSCSDSS*VKPNFC
Trigger: ACAGAAATTGGGTTTGACCAAAGAAGAATCACTGCA...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp CTTTCAAGTAAAGATACAGAAACAGGGCAGGAACTGGGAAGAGGTCAAATACAATTATTACCTCATAATTaGACAGAATGGGTACCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSKDTETGQELGRGQIQLLPHN*TEWVPR
Trigger: CCTGGGTACCCATTCTGTCAAATTATGAGGTAATAA...TTGTATTTGACCTCTTCCCAGTTCCTGCCCTGTTTCTGTATCTTTACTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS-3UTR CAA 90 bp TTTGGTAAAGAGACTTCTGAGCACACAACATGGACTTGGCCAATACTGAATTCAGAAGAGAGATGCTCTTaGGAATCTATTTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: FGKETSEHTTWTWPILNSEERCS*ESISSR
Trigger: TCTGGAAGAAATAGATTCCAAAGAGCATCTCTCTTC...TGAATTCAGTATTGGCCAAGTCCATGTTGTGTGCTCAGAAGTCTCTTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GGGGCAGGGTCCCGAGTGACCTCGGCCTGGCCTCGAATGGCACTGTaGCCCAAGGCCAGAGAACCGCTGCTGCTGCTCGATGGACTGCCA +
Preference number: 6 (lower is better)
Translates to: GAGSRVTSAWPRMAL*PKAREPLLLLDGLP
Trigger: TGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGGCCAGGCCGAGGTCACTCGGGACCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CGCCCCTCGGGCCTGCAAAGCACGGGCTTTAATGTCTaGGAGGGTCCTGGCACCAGTCCAACCCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RPSGLQSTGFNV*EGPGTSPTPAG
Trigger: TCCTGCCGGGGTTGGACTGGTGCCAGGACCCTCGCAGACATTAAAGCCCGTGCTTTGCAGGCCCGAGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TGGCACTGTTGCCCAAGGCCAGAGAACCGCTGCTGCTaGTCGATGGACTGCCACTCTCGCCATCTGCGTGGC +
Preference number: 6 (lower is better)
Translates to: WHCCPRPENRCC*SMDCHSRHLRG
Trigger: GCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CAGGGTGGCCACAGGCCTCACTACCATCACCACTGCTaGTGTCTCTGCCACCTCCCTCATCGATGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: QGGHRPHYHHHC*CLCHLPHRWPH
Trigger: GTGGGGCCATCGATGAGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTGAGGCCTGTGGCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GCTCAGGGTGGCCACAGGCCTCACTACCATCACCACTaGTGCTGTCTCTGCCACCTCCCTCATCGATGGCCC +
Preference number: 6 (lower is better)
Translates to: AQGGHRPHYHHH*CCLCHLPHRWP
Trigger: GGGCCATCGATGAGGGAGGTGGCAGAGACAGCAGCAGTGGTGATGGTAGTGAGGCCTGTGGCCACCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GTGTTCGCTGTAGATCTGACGCACTCTCTCCAGAGGTaGTTGGGGCTCCCCTGGGCTCAGGGTGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: VFAVDLTHSLQR*LGLPWAQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGAGTGCGTCAGATCTACAGCGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp CTGCTGCTCGATGGACTGCCACTCTCGCCATCTGCGTaGCGGCCTGAGAATCCTGACGCAGGTTCCACGTGG +
Preference number: 6 (lower is better)
Translates to: LLLDGLPLSPSA*RPENPDAGSTW
Trigger: CCACGTGGAACCTGCGTCAGGATTCTCAGGCCGCCACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp TCCCGAGTGACCTCGGCCTGGCCTCGAATGGCACTGTaGCCCAAGGCCAGAGAACCGCTGCTGCTGCTCGAT +
Preference number: 6 (lower is better)
Translates to: SRVTSAWPRMAL*PKAREPLLLLD
Trigger: ATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAGGCCAGGCCGAGGTCACTCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GCCACTGGAGTTTGGGAGGACAGAGGGGGCAAAGCCTaGCACGGCTGGTCTCCAGTGGGAGCAATAGGGGGT +
Preference number: 6 (lower is better)
Translates to: ATGVWEDRGGKA*HGWSPVGAIGG
Trigger: ACCCCCTATTGCTCCCACTGGAGACCAGCCGTGTCAGGCTTTGCCCCCTCTGTCCTCCCAAACTCCAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp TCTGGCCGAGAACGTTTCTTAAAATGTCCGTCCCGTTaGCGGGTGTTGGGCCCACGCTGCGGCCGCACAGAC +
Preference number: 6 (lower is better)
Translates to: SGRERFLKCPSR*RVLGPRCGRTD
Trigger: GTCTGTGCGGCCGCAGCGTGGGCCCAACACCCGTCAACGGGACGGACATTTTAAGAAACGTTCTCGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GAATGGCACTGTTGCCCAAGGCCAGAGAACCGCTGCTaGTGCTCGATGGACTGCCACTCTCGCCATCTGCGT +
Preference number: 6 (lower is better)
Translates to: EWHCCPRPENRC*CSMDCHSRHLR
Trigger: ACGCAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CTCGAATGGCACTGTTGCCCAAGGCCAGAGAACCGCTaGTGCTGCTCGATGGACTGCCACTCTCGCCATCTG +
Preference number: 6 (lower is better)
Translates to: LEWHCCPRPENR*CCSMDCHSRHL
Trigger: CAGATGGCGAGAGTGGCAGTCCATCGAGCAGCAGCAGCGGTTCTCTGGCCTTGGGCAACAGTGCCATTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp GCGTGGCGGCCTGAGAATCCTGACGCAGGTTCCACGTaGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACA +
Preference number: 6 (lower is better)
Translates to: AWRPENPDAGST*APFTFRGVRTT
Trigger: TGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAACCTGCGTCAGGATTCTCAGGCCGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GGTTCGGAGATCTGGCCGAGAACGTTTCTTAAAATGTCCGTCCCGTaGACGGGTGTTGGGCCCACGCTGCGGCCGCACAGACTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GSEIWPRTFLKMSVP*TGVGPTLRPHRLSR
Trigger: TCTGGAGAGTCTGTGCGGCCGCAGCGTGGGCCCAACACCCGTCAACGGGACGGACATTTTAAGAAACGTTCTCGGCCAGATCTCCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GTAGTTGTGTTCGCTGTAGATCTGACGCACTCTCTCCAGAGGTGCTaGGGGCTCCCCTGGGCTCAGGGTGGCCACAGGCCTCACTACCAT +
Preference number: 6 (lower is better)
Translates to: VVVFAVDLTHSLQRC*GLPWAQGGHRPHYH
Trigger: ATGGTAGTGAGGCCTGTGGCCACCCTGAGCCCAGGGGAGCCCCAAGCACCTCTGGAGAGAGTGCGTCAGATCTACAGCGAACACAACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GGGCAAAGCCTGACACGGCTGGTCTCCAGTGGGAGCAATAGGGGGTaGAGAGGCATCTTCCAGCCCACTTGTAAGCACACCTGGGACCCT +
Preference number: 6 (lower is better)
Translates to: GQSLTRLVSSGSNRG*RGIFQPTCKHTWDP
Trigger: AGGGTCCCAGGTGTGCTTACAAGTGGGCTGGAAGATGCCTCTCAACCCCCTATTGCTCCCACTGGAGACCAGCCGTGTCAGGCTTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp ACTGGGACACTTGGGACCCTCCTGTCCAGATGTTGCTaGGGACACATCTGGCCCAGGGGTACTGTTCACCCC +
Preference number: 6 (lower is better)
Translates to: TGTLGTLLSRCC*GHIWPRGTVHP
Trigger: GGGGTGAACAGTACCCCTGGGCCAGATGTGTCCTCAGCAACATCTGGACAGGAGGGTCCCAAGTGTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp ATCTGGCCGAGAACGTTTCTTAAAATGTCCGTCCCGTaGACGGGTGTTGGGCCCACGCTGCGGCCGCACAGA +
Preference number: 6 (lower is better)
Translates to: IWPRTFLKMSVP*TGVGPTLRPHR
Trigger: TCTGTGCGGCCGCAGCGTGGGCCCAACACCCGTCAACGGGACGGACATTTTAAGAAACGTTCTCGGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GGGCCGACCTTTAGCCACCCAGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGGCGGGACTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: GPTFSHPGWFDT*KLNPDGRDFGL
Trigger: GAGCCCAAAGTCCCGCCCATCCGGATTCAACTTTCACGTATCAAACCACCCTGGGTGGCTAAAGGTCGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp GACAGTGATGCAGTGTGGCCTGTACCAAAGCTGGCTTaGTGGCTCAGCTGCACCACACCACCAGCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: DSDAVWPVPKLA*WLSCTTPPARP
Trigger: AGGCCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp TCCCTTTCTGCTTGGATCTGGGAAGCCACAGGTTCACTGGGACACTaGGGACCCTCCTGTCCAGATGTTGCTGAGGACACATCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: SLSAWIWEATGSLGH*GPSCPDVAEDTSGP
Trigger: TGGGCCAGATGTGTCCTCAGCAACATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GCTCTGAGCTGCATGGGTGAAAAACTCATTATTGAGTaGACTGCCGCTGAGGCGCAGCAGGCCATCTGTCCC +
Preference number: 6 (lower is better)
Translates to: ALSCMGEKLIIE*TAAEAQQAICP
Trigger: GGGACAGATGGCCTGCTGCGCCTCAGCGGCAGTGCACTCAATAATGAGTTTTTCACCCATGCAGCTCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CTTCTGGCTCTGGGCATGGCAGCTTCAGCTGGAGTGTaGTCTCCATTCAGAGGACAAGGCGGCAGTAGTTGT +
Preference number: 6 (lower is better)
Translates to: LLALGMAASAGV*SPFRGQGGSSC
Trigger: ACAACTACTGCCGCCTTGTCCTCTGAATGGAGAGCACACTCCAGCTGAAGCTGCCATGCCCAGAGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GTCTTTCAAGGTCCACTTGCTCACTGTCACTGCCAGTaGTGCCCACAGCTGCTGGAGGAGGTGTCCAATGTG +
Preference number: 6 (lower is better)
Translates to: VFQGPLAHCHCQ*CPQLLEEVSNV
Trigger: CACATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TTTCCAGTCTTTCAAGGTCCACTTGCTCACTGTCACTaGCAGTGCTGCCCACAGCTGCTGGAGGAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: FPVFQGPLAHCH*QCCPQLLEEVS
Trigger: GGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp TCAGTGGGCACACAGACCTCGGCTGGCACTCAGTACTaGACAGCAACAGAGAGTCTGGGATCTTGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SVGTQTSAGTQY*TATESLGSCVG
Trigger: TCCCACACAAGATCCCAGACTCTCTGTTGCTGTCCAGTACTGAGTGCCAGCCGAGGTCTGTGTGCCCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp AGTGATGCAGTGTGGCCTGTACCAAAGCTGGCTTTGTaGCTCAGCTGCACCACACCACCAGCAAGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: SDAVWPVPKLAL*LSCTTPPARPL
Trigger: CAAAGGCCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp GACCCAGGCGTCTCAAAATCTACCTCTTCCCCTCTGTaGCGCTTCATTTGCCCTGTGGCTGGCTTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: DPGVSKSTSSPL*RFICPVAGFRK
Trigger: CTTCCGGAAGCCAGCCACAGGGCAAATGAAGCGCAACAGAGGGGAAGAGGTAGATTTTGAGACGCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp GCTTGGATCTGGGAAGCCACAGGTTCACTGGGACACTaGGGACCCTCCTGTCCAGATGTTGCTGAGGACACA +
Preference number: 6 (lower is better)
Translates to: AWIWEATGSLGH*GPSCPDVAEDT
Trigger: TGTGTCCTCAGCAACATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp TCTGTCTGGAGATGCAGAGGCACATGCCAAGTTGTCCCTTTCTGCTaGGATCTGGGAAGCCACAGGTTCACTGGGACACTTGGGACCCTC +
Preference number: 6 (lower is better)
Translates to: SVWRCRGTCQVVPFC*DLGSHRFTGTLGTL
Trigger: GAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCTCCAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp AGACATTGGCCTGGGGCCGCACCTGGATCACTGCCTTaGGACAGGGAATGGCCTTCTTTCTGCTCTTCACAA +
Preference number: 6 (lower is better)
Translates to: RHWPGAAPGSLP*DREWPSFCSSQ
Trigger: TTGTGAAGAGCAGAAAGAAGGCCATTCCCTGTCTCAAGGCAGTGATCCAGGTGCGGCCCCAGGCCAATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TGCCCACAGCTGCTGGAGGAGGTGTCCAATGTGAAATaGAGCTCTCAGGTTGGGGCACACTTTCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: CPQLLEEVSNVK*SSQVGAHFLLL
Trigger: CAGCAACAGAAAGTGTGCCCCAACCTGAGAGCTGCATTTCACATTGGACACCTCCTCCAGCAGCTGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp CTTGGATCTGGGAAGCCACAGGTTCACTGGGACACTTaGGACCCTCCTGTCCAGATGTTGCTGAGGACACAT +
Preference number: 6 (lower is better)
Translates to: LGSGKPQVHWDT*DPPVQMLLRTH
Trigger: ATGTGTCCTCAGCAACATCTGGACAGGAGGGTCCCAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp TGGTGCTTCAGAGATGCCATTCATTTCCAGTCTTTCAAGGTCCACTaGCTCACTGTCACTGCCAGTGCTGCCCACAGCTGCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: WCFRDAIHFQSFKVH*LTVTASAAHSCWRR
Trigger: CCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCATCTCTGAAGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CTGTGGCTGTCCCTGGGATTGGAGAGGGGTCGGCTCTaGGACTCTGTAGAGCAGGATGCATTTGAAGATGTT +
Preference number: 6 (lower is better)
Translates to: LWLSLGLERGRL*DSVEQDAFEDV
Trigger: AACATCTTCAAATGCATCCTGCTCTACAGAGTCTCAGAGCCGACCCCTCTCCAATCCCAGGGACAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CTGGGACCCTCTTCAACAGGCAGCTCTCTTCCTTTCTaGGAGAAGCTGAGTCTTCTCTTCTGGCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LGPSSTGSSLPF*EKLSLLFWLWA
Trigger: TGCCCAGAGCCAGAAGAGAAGACTCAGCTTCTCTCAGAAAGGAAGAGAGCTGCCTGTTGAAGAGGGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp TTTGTGGAGGAGAAACATGGCACTTTGGAGGTAGTGTaGTCTCCTAGACATTGGCCTGGGGCCGCACCTGGA +
Preference number: 6 (lower is better)
Translates to: FVEEKHGTLEVV*SPRHWPGAAPG
Trigger: TCCAGGTGCGGCCCCAGGCCAATGTCTAGGAGATCACACTACCTCCAAAGTGCCATGTTTCTCCTCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GCAGGTAGTGGTGTCTGCTCTTCAGACCTGGGGCACTaGAGGGTGGTAACTGTATTCCCGGGACCAAATAGT +
Preference number: 6 (lower is better)
Translates to: AGSGVCSSDLGH*RVVTVFPGPNS
Trigger: ACTATTTGGTCCCGGGAATACAGTTACCACCCTTCAGTGCCCCAGGTCTGAAGAGCAGACACCACTACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TGGAGATGCAGAGGCACATGCCAAGTTGTCCCTTTCTaGTTGGATCTGGGAAGCCACAGGTTCACTGGGACA +
Preference number: 6 (lower is better)
Translates to: WRCRGTCQVVPF*LDLGSHRFTGT
Trigger: TGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TTTCAAGGTCCACTTGCTCACTGTCACTGCCAGTGCTaGCCACAGCTGCTGGAGGAGGTGTCCAATGTGAAA +
Preference number: 6 (lower is better)
Translates to: FQGPLAHCHCQC*PQLLEEVSNVK
Trigger: TTTCACATTGGACACCTCCTCCAGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp GATGCAGAGGCACATGCCAAGTTGTCCCTTTCTGCTTaGATCTGGGAAGCCACAGGTTCACTGGGACACTTG +
Preference number: 6 (lower is better)
Translates to: DAEAHAKLSLSA*IWEATGSLGHL
Trigger: CAAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GGTAAGGTAGGGATTCTGTCTGGAGATGCAGAGGCACATGCCAAGTaGTCCCTTTCTGCTTGGATCTGGGAAGCCACAGGTTCACTGGGA +
Preference number: 6 (lower is better)
Translates to: GKVGILSGDAEAHAK*SLSAWIWEATGSLG
Trigger: TCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCTCCAGACAGAATCCCTACCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp ATTTGTAAGGACAGTGATGCAGTGTGGCCTGTACCAAAGCTGGCTTaGTGGCTCAGCTGCACCACACCACCAGCAAGGCCTTTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: ICKDSDAVWPVPKLA*WLSCTTPPARPLGK
Trigger: CTTTCCCAAAGGCCTTGCTGGTGGTGTGGTGCAGCTGAGCCACAAAGCCAGCTTTGGTACAGGCCACACTGCATCACTGTCCTTACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CATAACCCCAGTCCTTTTCTTCTGTTTGTTTGCCTGTaGGGAAGCCCTGTGGCTGTCCCTGGGATTGGAGAG +
Preference number: 6 (lower is better)
Translates to: HNPSPFLLFVCL*GSPVAVPGIGE
Trigger: CTCTCCAATCCCAGGGACAGCCACAGGGCTTCCTCACAGGCAAACAAACAGAAGAAAAGGACTGGGGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GGACAGCAACAGAGAGTCTGGGATCTTGTGTGGGACTaGACATACTCTAGACACCCAGCTCTGAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: GQQQRVWDLVWD*TYSRHPALRSS
Trigger: GCTGCTTCTCAGAGCTGGGTGTCTAGAGTATGTTCAGTCCCACACAAGATCCCAGACTCTCTGTTGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AGCGGAGTCCTCTGGCTCGTCTCCATCCACTGTAGCTaGATTTCTAGACCACTGCACTGCATCTTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SGVLWLVSIHCS*ISRPLHCIFLE
Trigger: CTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGAGACGAGCCAGAGGACTCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GAGATGCCATTCATTTCCAGTCTTTCAAGGTCCACTTaGTCACTGTCACTGCCAGTGCTGCCCACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: EMPFISSLSRST*SLSLPVLPTAA
Trigger: AGCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CCTGGAGGAAGAACCTTCTCCAAGGGCAAATTACCATaGAGCAGGTGCATCACAAGTGGGTTGGTAACCTCC +
Preference number: 6 (lower is better)
Translates to: PGGRTFSKGKLP*SRCITSGLVTS
Trigger: GGAGGTTACCAACCCACTTGTGATGCACCTGCTGCATGGTAATTTGCCCTTGGAGAAGGTTCTTCCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AGCCTTGGAGGCCATTGCCCTGACAAGACCAGCACTTaGTCCATAGCTCTGGGCCAGAATAGACTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: SLGGHCPDKTST*SIALGQNRLFQ
Trigger: TTGAAAGAGTCTATTCTGGCCCAGAGCTATGGAGCAAGTGCTGGTCTTGTCAGGGCAATGGCCTCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp CAGAGAGATGGCCTTCGGAGTCAGAGGCTGTATCTGTaGATTCACTGTGAGGACTTGGTGCTTCAGAGATGC +
Preference number: 6 (lower is better)
Translates to: QRDGLRSQRLYL*IHCEDLVLQRC
Trigger: GCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACTCCGAAGGCCATCTCTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp AGATGCAGAGGCACATGCCAAGTTGTCCCTTTCTGCTaGGATCTGGGAAGCCACAGGTTCACTGGGACACTT +
Preference number: 6 (lower is better)
Translates to: RCRGTCQVVPFC*DLGSHRFTGTL
Trigger: AAGTGTCCCAGTGAACCTGTGGCTTCCCAGATCCAAGCAGAAAGGGACAACTTGGCATGTGCCTCTGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp AGAGATGCCATTCATTTCCAGTCTTTCAAGGTCCACTaGCTCACTGTCACTGCCAGTGCTGCCCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: RDAIHFQSFKVH*LTVTASAAHSC
Trigger: GCAGCTGTGGGCAGCACTGGCAGTGACAGTGAGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp AGTGGCAGGGCATGGAAGGTCCGAGAGTTTATCAGAGCACGGAGGTaGGTGTTAACAAGAATGGACCCAGGCGTCTCAAAATCTACCTCT +
Preference number: 6 (lower is better)
Translates to: SGRAWKVREFIRARR*VLTRMDPGVSKSTS
Trigger: AGAGGTAGATTTTGAGACGCCTGGGTCCATTCTTGTTAACACCAACCTCCGTGCTCTGATAAACTCTCGGACCTTCCATGCCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp AGTGGCAGCTGTGATGACTCTAGTCGGCTGCTTCTGTaGCCTGGAGGAAGAACCTTCTCCAAGGGCAAATTA +
Preference number: 6 (lower is better)
Translates to: SGSCDDSSRLLL*PGGRTFSKGKL
Trigger: TAATTTGCCCTTGGAGAAGGTTCTTCCTCCAGGTCACAGAAGCAGCCGACTAGAGTCATCACAGCTGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CTTCTCCTCCTCTTGAGTTGGAATGTAGCATGGCATTaGGGCACGCAAGAGGGGATGTCCCACTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: LLLLLSWNVAWH*GTQEGMSHSFP
Trigger: AGGAAATGAGTGGGACATCCCCTCTTGCGTGCCTCAATGCCATGCTACATTCCAACTCAAGAGGAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS GCA 72 bp TTCACCATCAGCAAGGCGTTCTCGCCAGCTCTGAGCTaGATGGGTGAAAAACTCATTATTGAGTGCACTGCC +
Preference number: 6 (lower is better)
Translates to: FTISKAFSPALS*MGEKLIIECTA
Trigger: GGCAGTGCACTCAATAATGAGTTTTTCACCCATGCAGCTCAGAGCTGGCGAGAACGCCTTGCTGATGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp ATTAGACCCACAGCTTTCCACATCAGCGGAGTCCTCTaGCTCGTCTCCATCCACTGTAGCTGCATTTCTAGA +
Preference number: 6 (lower is better)
Translates to: IRPTAFHISGVL*LVSIHCSCISR
Trigger: TCTAGAAATGCAGCTACAGTGGATGGAGACGAGCCAGAGGACTCCGCTGATGTGGAAAGCTGTGGGTCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp GATGGGCGGGACTTTGGGCTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACTTTCAATTGTGTTACG +
Preference number: 6 (lower is better)
Translates to: DGRDFGLLFSGL*LFGVNTFNCVT
Trigger: CGTAACACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp GGAGGAGGTGTCCAATGTGAAATGCAGCTCTCAGGTTaGGGCACACTTTCTGTTGCTGCAATGAGAGGAACA +
Preference number: 6 (lower is better)
Translates to: GGGVQCEMQLSG*GTLSVAAMRGT
Trigger: TGTTCCTCTCATTGCAGCAACAGAAAGTGTGCCCCAACCTGAGAGCTGCATTTCACATTGGACACCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp CTGCTCTGTCTTGATGCTGTCAGCAGAGACAGGAGGTaGTTTGGGCATCCTGTTTTCCCTTGTAGTTTGCAC +
Preference number: 6 (lower is better)
Translates to: LLCLDAVSRDRR*FGHPVFPCSLH
Trigger: GTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCCTGTCTCTGCTGACAGCATCAAGACAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp CACTCAGTACTGGACAGCAACAGAGAGTCTGGGATCTaGTGTGGGACTGAACATACTCTAGACACCCAGCTC +
Preference number: 6 (lower is better)
Translates to: HSVLDSNRESGI*CGTEHTLDTQL
Trigger: GAGCTGGGTGTCTAGAGTATGTTCAGTCCCACACAAGATCCCAGACTCTCTGTTGCTGTCCAGTACTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp AGACAACTTCCCATACAAGGCCTGCTTGATGTTGAGTaGGGAAGGGATGGAAGAAGGCTCCAGGGGTTGACT +
Preference number: 6 (lower is better)
Translates to: RQLPIQGLLDVE*GRDGRRLQGLT
Trigger: AGTCAACCCCTGGAGCCTTCTTCCATCCCTTCCCAACTCAACATCAAGCAGGCCTTGTATGGGAAGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp GGCCTTCGGAGTCAGAGGCTGTATCTGTGGATTCACTGTGAGGACTaGGTGCTTCAGAGATGCCATTCATTTCCAGTCTTTCAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GLRSQRLYLWIHCED*VLQRCHSFPVFQGP
Trigger: TGGACCTTGAAAGACTGGAAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACTCCGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CTTCTCCTCCTCTTGAGTTGGAATGTAGCATGGCATTaGGGCACGCAAGAGGGGATGTCCCACTTCTCATTT +
Preference number: 6 (lower is better)
Translates to: LLLLLSWNVAWH*GTQEGMSHFSF
Trigger: AAATGAGAAGTGGGACATCCCCTCTTGCGTGCCTCAATGCCATGCTACATTCCAACTCAAGAGGAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS TCA 72 bp AGCTCTCAGGTTGGGGCACACTTTCTGTTGCTGCAATaGGAGGAACAGCTCTCTCCCACTCTTTTTCATCCT +
Preference number: 6 (lower is better)
Translates to: SSQVGAHFLLLQ*EEQLSPTLFHP
Trigger: AGGATGAAAAAGAGTGGGAGAGAGCTGTTCCTCTCATTGCAGCAACAGAAAGTGTGCCCCAACCTGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CCTTCGGAGTCAGAGGCTGTATCTGTGGATTCACTGTaGGGACTTGGTGCTTCAGAGATGCCATTCATTTCC +
Preference number: 6 (lower is better)
Translates to: PSESEAVSVDSL*GLGASEMPFIS
Trigger: GGAAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACTCCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp AAAGGCAGATCCACAACAAAAGGCATCCCTTGCAAGTaGCCCACTAGTTCCAGAGAACTGTACCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: KGRSTTKGIPCK*PTSSRELYPAA
Trigger: AGCTGCAGGGTACAGTTCTCTGGAACTAGTGGGTCACTTGCAAGGGATGCCTTTTGTTGTGGATCTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AATGCAGCTCTCAGGTTGGGGCACACTTTCTGTTGCTaGAATGAGAGGAACAGCTCTCTCCCACTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: NAALRLGHTFCC*NERNSSLPLFF
Trigger: GAAAAAGAGTGGGAGAGAGCTGTTCCTCTCATTGCAGCAACAGAAAGTGTGCCCCAACCTGAGAGCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AGAACCTTCTCCAAGGGCAAATTACCATGCAGCAGGTaGATCACAAGTGGGTTGGTAACCTCCACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: RTFSKGKLPCSR*ITSGLVTSTEE
Trigger: CTCTTCAGTGGAGGTTACCAACCCACTTGTGATGCACCTGCTGCATGGTAATTTGCCCTTGGAGAAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp TGTGAGTCTAAACTTGTAACCATCTTCGCAATCTTCTaGGACATTGCAGGAGCCTTGGAGGCCATTGCCCTG +
Preference number: 6 (lower is better)
Translates to: CESKLVTIFAIF*DIAGALEAIAL
Trigger: CAGGGCAATGGCCTCCAAGGCTCCTGCAATGTCCCAGAAGATTGCGAAGATGGTTACAAGTTTAGACTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp CAGACACAGAGTTTTTGCTTGGTTCTATCTTCCTACTaGGAAACACTGGAGGGACCTCAGCAGGTAGTGGTG +
Preference number: 6 (lower is better)
Translates to: QTQSFCLVLSSY*ETLEGPQQVVV
Trigger: CACCACTACCTGCTGAGGTCCCTCCAGTGTTTCCCAGTAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp GCATGGAAGGTCCGAGAGTTTATCAGAGCACGGAGGTaGGTGTTAACAAGAATGGACCCAGGCGTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: AWKVREFIRARR*VLTRMDPGVSK
Trigger: TTTTGAGACGCCTGGGTCCATTCTTGTTAACACCAACCTCCGTGCTCTGATAAACTCTCGGACCTTCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp CCTGTCCTTGTAAGCACACTTAGGTCATTGTTCACCTaGGACAGTGAGGCAGATGGGTCCCAGTCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: PVLVSTLRSLFT*DSEADGSQSCF
Trigger: AAAGCAAGACTGGGACCCATCTGCCTCACTGTCCAAGGTGAACAATGACCTAAGTGTGCTTACAAGGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp TCTGTCTTGATGCTGTCAGCAGAGACAGGAGGTGGTTaGGGCATCCTGTTTTCCCTTGTAGTTTGCACACCA +
Preference number: 6 (lower is better)
Translates to: SVLMLSAETGGG*GILFSLVVCTP
Trigger: TGGTGTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCCTGTCTCTGCTGACAGCATCAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp TTCAATGTTTGTGCAGAACCAGGGTTGATTCTGGCAGCTAGGCGATaGTTTTCCCCTGTACCTTGTAGAGTGCCTCTATCCTGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: FNVCAEPGLILAARR*FSPVPCRVPLSWLC
Trigger: ACAGAGCCAGGATAGAGGCACTCTACAAGGTACAGGGGAAAACAATCGCCTAGCTGCCAGAATCAACCCTGGTTCTGCACAAACATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 90 bp CTGAAGTTTAGACAACTTCCCATACAAGGCCTGCTTGATGTTGAGTaGGGAAGGGATGGAAGAAGGCTCCAGGGGTTGACTGAACCCTTT +
Preference number: 6 (lower is better)
Translates to: LKFRQLPIQGLLDVE*GRDGRRLQGLTEPF
Trigger: AAAGGGTTCAGTCAACCCCTGGAGCCTTCTTCCATCCCTTCCCAACTCAACATCAAGCAGGCCTTGTATGGGAAGTTGTCTAAACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GTGAATTCACCATCAGCAAGGCGTTCTCGCCAGCTCTaGGCTGCATGGGTGAAAAACTCATTATTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: VNSPSARRSRQL*AAWVKNSLLSA
Trigger: TGCACTCAATAATGAGTTTTTCACCCATGCAGCTCAGAGCTGGCGAGAACGCCTTGCTGATGGTGAATTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp GGAGGTGGTTTGGGCATCCTGTTTTCCCTTGTAGTTTaGACACCACCAGACACAGAGTTTTTGCTTGGTTCT +
Preference number: 6 (lower is better)
Translates to: GGGLGILFSLVV*TPPDTEFLLGS
Trigger: AGAACCAAGCAAAAACTCTGTGTCTGGTGGTGTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp ATGAGAGGAACAGCTCTCTCCCACTCTTTTTCATCCTaGGGCTCCGGACATGGTATGTTTTCTCTGGATTCT +
Preference number: 6 (lower is better)
Translates to: MRGTALSHSFSS*GSGHGMFSLDS
Trigger: AGAATCCAGAGAAAACATACCATGTCCGGAGCCCCAGGATGAAAAAGAGTGGGAGAGAGCTGTTCCTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp AGGAGGTGGTTTGGGCATCCTGTTTTCCCTTGTAGTTaGCACACCACCAGACACAGAGTTTTTGCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: RRWFGHPVFPCS*HTTRHRVFAWF
Trigger: GAACCAAGCAAAAACTCTGTGTCTGGTGGTGTGCAAACTACAAGGGAAAACAGGATGCCCAAACCACCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp TTTTCCATTTCCTGTCTTAGCCTGACTTGCATCTCATaGGTGAATTCACCATCAGCAAGGCGTTCTCGCCAG +
Preference number: 6 (lower is better)
Translates to: FSISCLSLTCIS*VNSPSARRSRQ
Trigger: CTGGCGAGAACGCCTTGCTGATGGTGAATTCACTCATGAGATGCAAGTCAGGCTAAGACAGGAAATGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CCTCAGTCAAAGCTTCTTGTCTACTACTTTCCCTTATaGGTAGGCCTGTGGCACCAAGCCCTAATCCATCAT +
Preference number: 6 (lower is better)
Translates to: PQSKLLVYYFPL*VGLWHQALIHH
Trigger: ATGATGGATTAGGGCTTGGTGCCACAGGCCTACTCATAAGGGAAAGTAGTAGACAAGAAGCTTTGACTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AGGGGATGTCCCACTTCTCATTTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAATCTGTTTTGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: RGCPTSHFLQSF*LYDLQNLFWCH
Trigger: ATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGAAGTGGGACATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS GCA 72 bp TCCATCCACTGTAGCTGCATTTCTAGACCACTGCACTaGATCTTTCTTGAGTGTGAAAAGACTAATGCGGCC +
Preference number: 6 (lower is better)
Translates to: SIHCSCISRPLH*IFLECEKTNAA
Trigger: GGCCGCATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CTGTGGATTCACTGTGAGGACTTGGTGCTTCAGAGATaGCATTCATTTCCAGTCTTTCAAGGTCCACTTGCT +
Preference number: 6 (lower is better)
Translates to: LWIHCEDLVLQR*HSFPVFQGPLA
Trigger: AGCAAGTGGACCTTGAAAGACTGGAAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TCTGCATCTGCCTTAATAGGATCCCTCAAAAATGTCTaGTCTGTCTTGATGCTGTCAGCAGAGACAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SASALIGSLKNV*SVLMLSAETGG
Trigger: ACCTCCTGTCTCTGCTGACAGCATCAAGACAGAGCAGACATTTTTGAGGGATCCTATTAAGGCAGATGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp CCACTCATTTCCTTCAGTCCTTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTCATTGGAGCATCTGAG +
Preference number: 6 (lower is better)
Translates to: PLISFSPSASMT*RICFGVIGASE
Trigger: CTCAGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS GCA 72 bp AAGAGGGGATGTCCCACTCATTTCCTTCAGTCCTTCTaGCTCTATGACCTGCAGAATCTGTTTTGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: KRGCPTHFLQSF*LYDLQNLFWCH
Trigger: ATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGTGGGACATCCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS TCA 72 bp TCCCACTTCTCATTTCCTTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTGGTGTCATTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: SHFSFPSVLLPL*PAESVLVSLEH
Trigger: ATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGAAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS TCA 72 bp GGGTCGGCTCTGAGACTCTGTAGAGCAGGATGCATTTaGAGATGTTTCATCCAGAGATACATCATTTTCACC +
Preference number: 6 (lower is better)
Translates to: GSALRLCRAGCI*RCFIQRYIIFT
Trigger: GGTGAAAATGATGTATCTCTGGATGAAACATCTTCAAATGCATCCTGCTCTACAGAGTCTCAGAGCCGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp CGTCCAGAACTACTCTCTGAGGGAATGGTGGGTCCTTaGTCTTCTCTACTAGATTCACACTCAGTTCTATCA +
Preference number: 6 (lower is better)
Translates to: RPELLSEGMVGP*SSLLDSHSVLS
Trigger: TGATAGAACTGAGTGTGAATCTAGTAGAGAAGATCAAGGACCCACCATTCCCTCAGAGAGTAGTTCTGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp ATGTCCCACTCATTTCCTTCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTGGTGTCATTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: MSHSFPSVLLPL*PAESVLVSLEH
Trigger: ATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGTGGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227428.2
CDS GCA 72 bp CTTCTCATTTCCTTCAGTCCTTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTCATTGGAGCATCTGAG +
Preference number: 6 (lower is better)
Translates to: LLISFSPSASMT*RICFGVIGASE
Trigger: CTCAGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTGAAGGAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109790.2
CDS CAA 72 bp AGTCAGAGGCTGTATCTGTGGATTCACTGTGAGGACTaGGTGCTTCAGAGATGCCATTCATTTCCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: SQRLYLWIHCED*VLQRCHSFPVF
Trigger: AAAGACTGGAAATGAATGGCATCTCTGAAGCACCAAGTCCTCACAGTGAATCCACAGATACAGCCTCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp TCCCTTGTAGTTTGCACACCACCAGACACAGAGTTTTaGCTTGGTTCTATCTTCCTACTGGGAAACACTGGA +
Preference number: 6 (lower is better)
Translates to: SLVVCTPPDTEF*LGSIFLLGNTG
Trigger: TCCAGTGTTTCCCAGTAGGAAGATAGAACCAAGCAAAAACTCTGTGTCTGGTGGTGTGCAAACTACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp TCGTCTCCATCCACTGTAGCTGCATTTCTAGACCACTaGACTGCATCTTTCTTGAGTGTGAAAAGACTAATG +
Preference number: 6 (lower is better)
Translates to: SSPSTVAAFLDH*TASFLSVKRLM
Trigger: CATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTACAGTGGATGGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS GCA 72 bp AGAACTGTACCCTGCAGCTTTTCTGTTCTCTGCATCTaGCTTAATAGGATCCCTCAAAAATGTCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: RTVPCSFSVLCI*LNRIPQKCLLC
Trigger: ACAGAGCAGACATTTTTGAGGGATCCTATTAAGGCAGATGCAGAGAACAGAAAAGCTGCAGGGTACAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CCA 72 bp TTTGTATATATTCCTTCTGGATCTGGTTCGGAGATCTaGCCGAGAACGTTTCTTAAAATGTCCGTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: FVYIPSGSGSEI*PRTFLKMSVPL
Trigger: CAACGGGACGGACATTTTAAGAAACGTTCTCGGCCAGATCTCCGAACCAGATCCAGAAGGAATATATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS TCA 72 bp GGATTCTGGATCAGATGTTTTTATTACCTCATAATTTaGCAGAATGGGTACCCAGGAGGTAGGACTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GFWIRCFYYLII*QNGYPGGRTAR
Trigger: TCTGGCAGTCCTACCTCCTGGGTACCCATTCTGTCAAATTATGAGGTAATAAAAACATCTGATCCAGAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2
CDS CAA 72 bp GTAGCTGCATTTCTAGACCACTGCACTGCATCTTTCTaGAGTGTGAAAAGACTAATGCGGCCAGGTAATTTA +
Preference number: 6 (lower is better)
Translates to: VAAFLDHCTASF*SVKRLMRPGNL
Trigger: TAAATTACCTGGCCGCATTAGTCTTTTCACACTCAAGAAAGATGCAGTGCAGTGGTCTAGAAATGCAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109790.2
ENSMUST00000227428.2