Pregenerated sensors for ASTL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050468Ensembl transcript IDs: ENSMUST00000059839.9, ENSMUST00000089673.10, ENSMUST00000156747.2, ENSMUST00000179618.8
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTaGGGTCCATGCCCAAGGCAGCACTTGAGTCCATGCTGGGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: HGEQDIQGSSHRASH*GPCPRQHLSPCWEL Trigger: TAGCTCCCAGCATGGACTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR GCA 90 bp | GACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCTTaGCAAGGCCTCCACCATGCAGAGCTGATAAGGAACCATCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: DIHKDSRLLSRDWWS*QGLHHAELIRNHLL Trigger: CAAGAGATGGTTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR TCA 90 bp | TGCCCAAGGCAGCACTTGAGTCCATGCTGGGAGCTAGTCCTCAGTTaGAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: CPRQHLSPCWELVLS*RTSRGNQYWNLALD Trigger: GTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCCCAGCATGGACTCAAGTGCTGCCTTGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR TCA 90 bp | CCTCAGTGGCTTCTAGTTGAGCACCTTGTGGGCAAAACAGTGATCTaGCATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: PQWLLVEHLVGKTVI*HSQRLKAAVQGLVV Trigger: GACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTTTTGCCCACAAGGTGCTCAACTAGAAGCCACTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR GCA 90 bp | TCAAGGAGGAGTATGGCATGGCTGAAGGACAAGTCGTGTGACATTTaGCCTCAGTGGCTTCTAGTTGAGCACCTTGTGGGCAAAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: SRRSMAWLKDKSCDI*PQWLLVEHLVGKTV Trigger: CACTGTTTTGCCCACAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCCTTCAGCCATGCCATACTCCTCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR GCA 90 bp | ATGAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTaGCCTTCCTCGCTGGTTCTGGTTCCCCTTCTATCCCAAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: MKQTPNFISTFSHMK*PSSLVLVPLLSQAG Trigger: CCCTGCTTGGGATAGAAGGGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059839.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTTGAGGAGCTAGTCCTCAGTTaGAGAACTTCCAGAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: RFQPQGFPLRSMPKAALEELVLS*RTSRGN Trigger: GTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTC...CTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTAGGATCCTGTCTCCATaGCAAGCATCTTCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FKVPATGLPTEVHAQGSTRILSP*QASSRA Trigger: AGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTAGGGTGGGGGTGTTGTaGGAAAAGAGACCAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FKVPATGLPTEVHAQGSTRVGVL*EKRPRK Trigger: CTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCT...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCAAGGATCCTGTCTCCATaGCAAGCATCTTCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: YSRFQPQGFPLRSMPKAARILSP*QASSRA Trigger: AGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT...TGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAAGGGTGGGGGTGTTGTaGGAAAAGAGACCAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ATPRILSPCQASSRAKAQRVGVL*EKRPRK Trigger: CTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCT...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTAGAGGCAACCAATACTaGAACCTTGCTCTTGACGGC | + |
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Preference number: 2 (lower is better) Translates to: FKVPATGLPTEVHAQGSTRGNQY*NLALDG Trigger: GCCGTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCT...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGAACTCTGCAGGGTaGGGGTGTTGTGGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QASWRAGYSRFQPQGFPLRNSAG*GCCGKR Trigger: TCTTTTCCCACAACACCCCCACCCTGCAGAGTTCCT...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGAACAGGACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATGATAGAAGACAGGGGTaGTGCCCAGAGGGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PGEQDLIPGLQNIFRARHDRRQG*CPEGPK Trigger: CTTTGGCCCCTCTGGGCATCACCCCTGTCTTCTATC...ATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGACAAGTCGTGTGACATTTGCCCTCAGTGGCTTCTAGTTGAGCACCTTGTGGATAGAAGACAGGGGTaGTGCCCAGAGGGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KDKSCDICPQWLLVEHLVDRRQG*CPEGPK Trigger: CTTTGGCCCCTCTGGGCATCACCCCTGTCTTCTATC...CACAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGTCCAGCTTAGCAGGAGAACCAAGTGTGTTCTCTGCCTCCTGGAGAACAGGAGGATCCTGTCTCCATaGCAAGCATCTTCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVQLSRRTKCVLCLLENRRILSP*QASSRA Trigger: AGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT...CCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTCTCCTGCTAAGCTGGACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCGATAGAAGACAGGGGTaGTGCCCAGAGGGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FISTFSHMKCPSSLVLVPDRRQG*CPEGPK Trigger: CTTTGGCCCCTCTGGGCATCACCCCTGTCTTCTATC...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCTACACCCTCTCCACTTaGGGACAGAAGTCTAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SCLHAKHLPGLRLKPRKAYTLST*GQKSKG Trigger: GCCTTTAGACTTCTGTCCCCAAGTGGAGAGGGTGTA...GGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTCTTGCCAAGGCCTCCACCATGCAGAGCTGATAAGGAACCATCTCTTGAGAGGCAACCAATACTaGAACCTTGCTCTTGACGGC | + |
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Preference number: 2 (lower is better) Translates to: WWSCQGLHHAELIRNHLLRGNQY*NLALDG Trigger: GCCGTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCT...CAAGAGATGGTTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTAAGAGACCAAGGAAGTaGCCTGGGCCTGCTAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGKRPRK*PGPARV Trigger: TACTCTAGCAGGCCCAGGTCACTTCCTTGGTCTCTT...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTAGGGACTGGTGGTCTTaGCAAGGCCTCCACCATGCA | + |
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Preference number: 2 (lower is better) Translates to: ANTQLYFYLFPHEVPFLARDWWS*QGLHHA Trigger: TGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCT...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTAAGAGACCAAGGAAGTaGCCTGGGCCTGCTAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: ASPQLKNFQRQPILEPCSKRPRK*PGPARV Trigger: TACTCTAGCAGGCCCAGGTCACTTCCTTGGTCTCTT...AGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGACAAGTCGTGTGACATTTGCCCTCAGTGGCTTCTAGTTGAGCACCTTGTGTACACCCTCTCCACTTaGGGACAGAAGTCTAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: KDKSCDICPQWLLVEHLVYTLST*GQKSKG Trigger: GCCTTTAGACTTCTGTCCCCAAGTGGAGAGGGTGTA...CACAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCAGGGTGGGGGTGTTGTaGGAAAAGAGACCAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FISTFSHMKCPSSLVLVPRVGVL*EKRPRK Trigger: CTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCT...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTAGGAACTCTGCAGGGTaGGGGTGTTGTGGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GLQNIFRARHHGEQDIQGRNSAG*GCCGKR Trigger: TCTTTTCCCACAACACCCCCACCCTGCAGAGTTCCT...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTACCAAGTGTGTTCTCTaGCTCCTGGAGAACAGGACT | + |
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Preference number: 2 (lower is better) Translates to: ANTQLYFYLFPHEVPFLATKCVL*LLENRT Trigger: AGTCCTGTTCTCCAGGAGGCAGAGAACACACTTGGT...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTAGAATTGAGGACTCCTaGCTCAGACCCTACCACCTA | + |
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Preference number: 2 (lower is better) Translates to: ANTQLYFYLFPHEVPFLARIEDS*LRPYHL Trigger: TAGGTGGTAGGGTCTGAGCCAGGAGTCCTCAATTCT...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGAGCTAGTCCTCAGTTaGAGAACTTCCAGAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: EANTQLYFYLFPHEVPFLELVLS*RTSRGN Trigger: GTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTC...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCAGAGGCAACCAATACTaGAACCTTGCTCTTGACGGC | + |
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Preference number: 2 (lower is better) Translates to: EANTQLYFYLFPHEVPFLRGNQY*NLALDG Trigger: GCCGTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCT...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCAAGTCGTGTGACATTTaGCCTCAGTGGCTTCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: EANTQLYFYLFPHEVPFLKSCDI*PQWLLV Trigger: AACTAGAAGCCACTGAGGGCAAATGTCACACGACTT...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR TCA 72 bp | CAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTaGGGTCCATGCCCAAGGCAGCACTTGAGTCCATGC | + |
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Preference number: 3 (lower is better) Translates to: QDIQGSSHRASH*GPCPRQHLSPC Trigger: GCATGGACTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR CCA 72 bp | GACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTaGTGGTCTTGCCAAGGCCTCCACCATGCAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: DIHKDSRLLSRD*WSCQGLHHAEL Trigger: CAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGTCCAGCTTAGCAGGAGAACCAAGTGTGTTCTCTGCCTCCTGGAGAACAGGTGCAGGGTGGGGGTGTaGTGGGAAAAGAGACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LVQLSRRTKCVLCLLENRCRVGV*WEKRPR Trigger: CCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCA...CCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTCTCCTGCTAAGCTGGACTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR GCA 72 bp | AAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCTTaGCAAGGCCTCCACCATGCAGAGCTGATAAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: KDSRLLSRDWWS*QGLHHAELIRN Trigger: GTTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR CCA 72 bp | ATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTaGTCTTGCCAAGGCCTCCACCATGCAGAGCTGATA | + |
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Preference number: 3 (lower is better) Translates to: IHKDSRLLSRDW*SCQGLHHAELI Trigger: TATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR GCA 72 bp | AGTATGGCATGGCTGAAGGACAAGTCGTGTGACATTTaGCCTCAGTGGCTTCTAGTTGAGCACCTTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SMAWLKDKSCDI*PQWLLVEHLVG Trigger: GCCCACAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCCTTCAGCCATGCCATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTTGCAGGGTGGGGGTGTaGTGGGAAAAGAGACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GLQNIFRARHHGEQDIQGCRVGV*WEKRPR Trigger: CCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCA...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CAA 90 bp | AACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTGCAGGGTGGGGGTGTaGTGGGAAAAGAGACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: NTQLYFYLFPHEVPFLAGCRVGV*WEKRPR Trigger: CCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCA...ACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTTGCCCAAGGCAGCACTaGAGTCCATGCTGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: ANTQLYFYLFPHEVPFLACPRQH*SPCWEL Trigger: TAGCTCCCAGCATGGACTCAAGTGCTGCCTTGGGCA...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR CCA 72 bp | TGGCTGAAGGACAAGTCGTGTGACATTTGCCCTCAGTaGCTTCTAGTTGAGCACCTTGTGGGCAAAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: WLKDKSCDICPQ*LLVEHLVGKTV Trigger: CACTGTTTTGCCCACAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCCTTCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCTGCCCAAGGCAGCACTaGAGTCCATGCTGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: EANTQLYFYLFPHEVPFLCPRQH*SPCWEL Trigger: TAGCTCCCAGCATGGACTCAAGTGCTGCCTTGGGCA...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR TCA 72 bp | CAGCACTTGAGTCCATGCTGGGAGCTAGTCCTCAGTTaGAGAACTTCCAGAGGCAACCAATACTGGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: QHLSPCWELVLS*RTSRGNQYWNL Trigger: AAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCCCAGCATGGACTCAAGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| 3UTR TCA 72 bp | AGAAACCTCATAGATCAAGGAGGAGTATGGCATGGCTaGAGGACAAGTCGTGTGACATTTGCCCTCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RNLIDQGGVWHG*RTSRVTFALSG Trigger: GCCACTGAGGGCAAATGTCACACGACTTGTCCTTCAGCCATGCCATACTCCTCCTTGATCTATGAGGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CCA 72 bp | AGCTTAGCAGGAGAACCAAGTGTGTTCTCTGCCTCCTaGAGAACAGGACTTAATCCCAGGGCTTCAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLAGEPSVFSAS*RTGLNPRASEH Trigger: ATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTCTCCTGCTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGAGCTAGTCCTCAGTaGAAGAACTTCCAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ANTQLYFYLFPHEVPFLAGASPQ*KNFQRQ Trigger: TTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAGGACTCCTGGCTCAGACCCTACCACCTACATGCTTTGTTCTTAGAAGAAGGAGCTAGTCCTCAGTaGAAGAACTTCCAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IEDSWLRPYHLHALFLEEGASPQ*KNFQRQ Trigger: TTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC...TTCTTCTAAGAACAAAGCATGTAGGTGGTAGGGTCTGAGCCAGGAGTCCTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCTACCACCTACATGCTTaGTTCTTAGAAGAAACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FISTFSHMKCPSSLVLVPYHLHA*FLEETS Trigger: TGAGGTTTCTTCTAAGAACAAAGCATGTAGGTGGTA...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTGGTATGATGGTGGGCTaGCCACGCCAGCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKVPATGLPTEVHAQGSTGMMVG*PRQLKA Trigger: TGCCTTCAGCTGGCGTGGGCAGCCCACCATCATACC...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTTGAGCTGCTTCCATCACTCTaGGCCTCAAACCCTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFQPQGFPLRSMPKAALELLPSL*ASNPLP Trigger: CGGGAGAGGGTTTGAGGCCCAGAGTGATGGAAGCAG...CTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCAGTCCCGATCTGCCCGTaGATGCTCATGCCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSRFQPQGFPLRSMPKAAVPICP*MLMPEA Trigger: GGCTTCTGGCATGAGCATTCACGGGCAGATCGGGAC...TGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCGCCAAGGACACCACCTaGATCCCTCCACTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCAKDTT*IPPLRP Trigger: GGGACGCAGTGGAGGGATGCAGGTGGTGTCCTTGGC...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAACTGCTTCCATCACTCTaGGCCTCAAACCCTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATPRILSPCQASSRAKAQLLPSL*ASNPLP Trigger: CGGGAGAGGGTTTGAGGCCCAGAGTGATGGAAGCAG...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAACTCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACAGCCCGGCAATACTCTaGCCTCCAGTCCTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRNSAGWGCCGKRDQGSDSPAIL*PPVLEP Trigger: TGGCTCCAGGACTGGAGGCCAGAGTATTGCCGGGCT...GTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGAGTTCCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCCCTAGAGCCTCTAGCCCGGCAATACTCTaGCCTCCAGTCCTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKHLPGLRLKPRKAPRASSPAIL*PPVLEP Trigger: TGGCTCCAGGACTGGAGGCCAGAGTATTGCCGGGCT...AGAGGCTCTAGGGGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGGGCTTCCCTCAGGAGTaGAGCCTTCTGGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QASWRAGYSRFQPQGFPLGFPQE*SLLEHW Trigger: CCAGTGTTCCAGAAGGCTTCACTCCTGAGGGAAGCC...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCGTCCCGATCTGCCCGTaGATGCTCATGCCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLHAKHLPGLRLKPRKAVPICP*MLMPEA Trigger: GGCTTCTGGCATGAGCATTCACGGGCAGATCGGGAC...GGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCCCTGCATCCCTCCACTaGGTCCCACACCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCPASLH*VPHQRN Trigger: GTTTCTCTGGTGTGGGACGCAGTGGAGGGATGCAGG...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCCCTAGAGCCTCTCCGGAGACAAGTGGGTaGCAAGGACACCACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKHLPGLRLKPRKAPRASPETSG*QGHHLH Trigger: ATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGG...AGAGGCTCTAGGGGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTCTTGCCAAGGCCTCCACCATGCAGAGCTGATAAGGAACCATCTCTTGGGTATGATGGTGGGCTaGCCACGCCAGCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WWSCQGLHHAELIRNHLLGMMVG*PRQLKA Trigger: TGCCTTCAGCTGGCGTGGGCAGCCCACCATCATACC...CAAGAGATGGTTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTCATCTGAGGTGGTCTTaGCAAGGCTCCCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKVPATGLPTEVHAQGSTHLRWS*QGSHTE Trigger: TTCAGTGTGGGAGCCTTGGCAAGACCACCTCAGATG...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGACTGGAGGTCCAGAGTaGTATGATGGTGGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QASWRAGYSRFQPQGFPLTGGPE*YDGGLP Trigger: GGGCAGCCCACCATCATACCACTCTGGACCTCCAGT...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCTGCTCCCATCCTTGCTaGCTGTTACCAAGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCCSHPC*LLPSPA Trigger: TGCCGGGCTTGGTAACAGCCAGCAAGGATGGGAGCA...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTTGAGATCTTGGATAGGTGCTaGCTTGTCTCTGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFQPQGFPLRSMPKAALEILDRC*LVSGFW Trigger: CCAGAAGCCAGAGACAAGCCAGCACCTATCCAAGAT...CTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTTTCTGGGGTCTCCTCTaGGATGAGCCCTTGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKVPATGLPTEVHAQGSTFWGLL*DEPLVN Trigger: ATTAACCAAGGGCTCATCTCAGAGGAGACCCCAGAA...AGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGAGGTCCAGAGTGGTATaGTGGTGGGCTGCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLIPGLQNIFRARHHGEQRSRVV*WWAAHA Trigger: GGCGTGGGCAGCCCACCATCATACCACTCTGGACCT...CTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCAGGTCCAGAGTGGTATaGTGGTGGGCTGCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCRSRVV*WWAAHA Trigger: GGCGTGGGCAGCCCACCATCATACCACTCTGGACCT...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCGACCCGGGTGATATCTaGGGTACTCAGGTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCDPGDI*GTQVPS Trigger: CGATGGAACCTGAGTACCTCAGATATCACCCGGGTC...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAACACTGAATGTGCTCTaGGGAGGATGCTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATPRILSPCQASSRAKAQTLNVL*GGCSHP Trigger: AGGATGGGAGCATCCTCCTCAGAGCACATTCAGTGT...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAACTTCTACCAGGAAGCTaGTTTCTGGGGTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATPRILSPCQASSRAKAQLLPGS*FLGSPL Trigger: CAGAGGAGACCCCAGAAAGCAGCTTCCTGGTAGAAG...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCAGCTTAGCAGGAGAACCAAGTGTGTTCTCTGCCTCCTGGAGAACAGGCCTGCATCCCTCCACTaGGTCCCACACCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVQLSRRTKCVLCLLENRPASLH*VPHQRN Trigger: GTTTCTCTGGTGTGGGACGCAGTGGAGGGATGCAGG...CCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTCTCCTGCTAAGCTGGACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTGCCAAGGACACCACCTaGATCCCTCCACTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGAKDTT*IPPLRP Trigger: GGGACGCAGTGGAGGGATGCAGGTGGTGTCCTTGGC...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCAAGACTCCAGAACATCTaGATGCTGAGGGTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSRFQPQGFPLRSMPKAARLQNI*MLRVLP Trigger: TGGGAGCACCCTCAGCATCCAGATGTTCTGGAGTCT...TGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAAGTGTGTTCTCTGCCTCCTGGAGAACAGGACTTAATCCCAGGGCTTCAAGCCCGGCAATACTCTaGCCTCCAGTCCTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSVFSASWRTGLNPRASSPAIL*PPVLEP Trigger: TGGCTCCAGGACTGGAGGCCAGAGTATTGCCGGGCT...TGAAGCCCTGGGATTAAGTCCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CAA 72 bp | CAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCTaGCCAAGGCCTCCACCATGCAGAGCTGATAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRLKAAVQGLVV*PRPPPCRADKE Trigger: TTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGTGTGTTCTCTGCCTCCTGGAGAACAGGACTTAATCCCAGGGCTTCAGGCTTCCCTCAGGAGTaGAGCCTTCTGGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPSVFSASWRTGLNPRASGFPQE*SLLEHW Trigger: CCAGTGTTCCAGAAGGCTTCACTCCTGAGGGAAGCC...TGAAGCCCTGGGATTAAGTCCTGTTCTCCAGGAGGCAGAGAACACACTTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAATTCTGGGGTCTCCTCTaGGATGAGCCCTTGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPRILSPCQASSRAKAQFWGLL*DEPLVN Trigger: ATTAACCAAGGGCTCATCTCAGAGGAGACCCCAGAA...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCGTCCCGATCTGCCCGTaGATGCTCATGCCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCVPICP*MLMPEA Trigger: GGCTTCTGGCATGAGCATTCACGGGCAGATCGGGAC...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCACACTGAATGTGCTCTaGGGAGGATGCTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCTLNVL*GGCSHP Trigger: AGGATGGGAGCATCCTCCTCAGAGCACATTCAGTGT...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGACACTGAATGTGCTCTaGGGAGGATGCTCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QASWRAGYSRFQPQGFPLTLNVL*GGCSHP Trigger: AGGATGGGAGCATCCTCCTCAGAGCACATTCAGTGT...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGAACTCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACGAGCCCTTGGTTAATTaGGGGGATGTCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRNSAGWGCCGKRDQGSDEPLVN*GDVLVL Trigger: CAGGACAAGGACATCCCCGCAATTAACCAAGGGCTC...GTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGAGTTCCTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCGCCAAGGACACCACCTaGATCCCTCCACTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FISTFSHMKCPSSLVLVPAKDTT*IPPLRP Trigger: GGGACGCAGTGGAGGGATGCAGGTGGTGTCCTTGGC...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCCATCTGAGGTGGTCTTaGCAAGGCTCCCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCHLRWS*QGSHTE Trigger: TTCAGTGTGGGAGCCTTGGCAAGACCACCTCAGATG...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCAATCTTGGATAGGTGCTaGCTTGTCTCTGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSRFQPQGFPLRSMPKAAILDRC*LVSGFW Trigger: CCAGAAGCCAGAGACAAGCCAGCACCTATCCAAGAT...TGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CAA 72 bp | GAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTaGACGGCCACTCCCAGGATCCTGTCTCCATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELPEATNTGTLL*TATPRILSPCQ Trigger: TTGGCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGAACAGGACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATGGCTTCCCTCAGGAGTaGAGCCTTCTGGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGEQDLIPGLQNIFRARHGFPQE*SLLEHW Trigger: CCAGTGTTCCAGAAGGCTTCACTCCTGAGGGAAGCC...ATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | AACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTAGGTCCAGAGTGGTATaGTGGTGGGCTGCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTQLYFYLFPHEVPFLAGRSRVV*WWAAHA Trigger: GGCGTGGGCAGCCCACCATCATACCACTCTGGACCT...ACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAACATCGCTGGCCAATGTaGACACTGGAGGTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RILSPCQASSRAKAQAKKHRWPM*TLEVQS Trigger: ACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATG...TTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCCCGGAGACAAGTGGGTaGCAAGGACACCACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCPETSG*QGHHLH Trigger: ATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGG...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCCGGAGACAAGTGGGTaGCAAGGACACCACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGPETSG*QGHHLH Trigger: ATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGG...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCGGTATGATGGTGGGCTaGCCACGCCAGCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FISTFSHMKCPSSLVLVPGMMVG*PRQLKA Trigger: TGCCTTCAGCTGGCGTGGGCAGCCCACCATCATACC...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCCCTAGAGCCTCTAGGAGTGAAGCCTTCTaGAACACTGGTACTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AKHLPGLRLKPRKAPRASRSEAF*NTGTAD Trigger: GTCTGCAGTACCAGTGTTCCAGAAGGCTTCACTCCT...AGAGGCTCTAGGGGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGAGTGAAGCCTTCTaGAACACTGGTACTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QASWRAGYSRFQPQGFPLRSEAF*NTGTAD Trigger: GTCTGCAGTACCAGTGTTCCAGAAGGCTTCACTCCT...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGAACAGGACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATCTGCTTCCATCACTCTaGGCCTCAAACCCTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGEQDLIPGLQNIFRARHLLPSL*ASNPLP Trigger: CGGGAGAGGGTTTGAGGCCCAGAGTGATGGAAGCAG...ATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CAA 72 bp | GTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTaGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEELPEATNTGT*LLTATPRILSP Trigger: TGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGAACAGGACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATCATCGCTGGCCAATGTaGACACTGGAGGTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGEQDLIPGLQNIFRARHHRWPM*TLEVQS Trigger: ACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATG...ATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAGCTTCCAGATTCCTCTaGCAGTGCCTCGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RILSPCQASSRAKAQAKKASRFL*QCLEKS Trigger: AGACTTCTCGAGGCACTGTCAGAGGAATCTGGAAGC...TTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTCCTGCATCCCTCCACTaGGTCCCACACCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPQLKNFQRQPILEPCSPASLH*VPHQRN Trigger: GTTTCTCTGGTGTGGGACGCAGTGGAGGGATGCAGG...AGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGCAGAAGCCAAGTACGTaGATGAGCTCATGTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QASWRAGYSRFQPQGFPLQKPST*MSSCRT Trigger: TGTCCTACATGAGCTCATGCACGTACTTGGCTTCTG...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTACTGGAGGTCCAGAGTaGTATGATGGTGGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQNIFRARHHGEQDIQGTGGPE*YDGGLP Trigger: GGGCAGCCCACCATCATACCACTCTGGACCTCCAGT...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTTGCTCCCATCCTTGCTaGCTGTTACCAAGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQNIFRARHHGEQDIQGCSHPC*LLPSPA Trigger: TGCCGGGCTTGGTAACAGCCAGCAAGGATGGGAGCA...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | ACCAATACTGGAACCTTGCTCTTGACGGCCACTCCCAGGATCCTGTCTCCATGCGTGCTGGCTTGTCTCTaGCTTCTGGAAATAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNTGTLLLTATPRILSPCVLACL*LLEIEQ Trigger: TTGCTCTATTTCCAGAAGCCAGAGACAAGCCAGCAC...GCATGGAGACAGGATCCTGGGAGTGGCCGTCAAGAGCAAGGTTCCAGTATTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAACTCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACCTCTCAAAGGCATCTTaGATAGGTGCTGGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRNSAGWGCCGKRDQGSDLSKAS*IGAGLS Trigger: AGACAAGCCAGCACCTATCCAAGATGCCTTTGAGAG...GTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGAGTTCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCCCTAGAGCCTCTCAAACCGGATGCATGTaGAACGTTCAAACTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKHLPGLRLKPRKAPRASQTGCM*NVQTQQ Trigger: TTGCTGAGTTTGAACGTTTCACATGCATCCGGTTTG...AGAGGCTCTAGGGGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTGACCCGGGTGATATCTaGGGTACTCAGGTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: GLQNIFRARHHGEQDIQGDPGDI*GTQVPS Trigger: CGATGGAACCTGAGTACCTCAGATATCACCCGGGTC...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCGAGCCCTTGGTTAATTaGGGGGATGTCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCEPLVN*GDVLVL Trigger: CAGGACAAGGACATCCCCGCAATTAACCAAGGGCTC...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTGAGCCCTTGGTTAATTaGGGGGATGTCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGEPLVN*GDVLVL Trigger: CAGGACAAGGACATCCCCGCAATTAACCAAGGGCTC...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCCTTCTACCAGGAAGCTaGTTTCTGGGGTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCLLPGS*FLGSPL Trigger: CAGAGGAGACCCCAGAAAGCAGCTTCCTGGTAGAAG...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCAATGTGACTTCCAGGTaGACAGCCTCCTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCNVTSR*TASWKW Trigger: CCACTTCCAGGAGGCTGTGCACCTGGAAGTCACATT...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCAGACTCCAGAACATCTaGATGCTGAGGGTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCRLQNI*MLRVLP Trigger: TGGGAGCACCCTCAGCATCCAGATGTTCTGGAGTCT...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACCTGGGCCTGTGGGCCATTTATTATTaGTCACTGACAACAATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAGWGCCGKRDQGSDLGLWAIYY*SLTTIG Trigger: TCCGATTGTTGTCAGTGACCAATAATAAATGGCCCA...CAGGCCCAGGTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTTGCTCCCATCCTTGCTaGCTGTTACCAAGCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANTQLYFYLFPHEVPFLACSHPC*LLPSPA Trigger: TGCCGGGCTTGGTAACAGCCAGCAAGGATGGGAGCA...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CAA 72 bp | GCAGCACTTGAGTCCATGCTGGGAGCTAGTCCTCAGTaGAAGAACTTCCAGAGGCAACCAATACTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: AALESMLGASPQ*KNFQRQPILEP Trigger: AGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCCCAGCATGGACTCAAGTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| 3UTR CAA 72 bp | GGCCTCCACCATGCAGAGCTGATAAGGAACCATCTCTaGCTAGTCCAGCTTAGCAGGAGAACCAAGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHHAELIRNHL*LVQLSRRTKCV Trigger: AACACACTTGGTTCTCCTGCTAAGCTGGACTAGCAAGAGATGGTTCCTTATCAGCTCTGCATGGTGGAGGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGACTCCTGGCTCAGACCCTACCACCTACATGCTTTGTTCTTAGAAGAAGACCCGGGTGATATCTaGGGTACTCAGGTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IEDSWLRPYHLHALFLEEDPGDI*GTQVPS Trigger: CGATGGAACCTGAGTACCTCAGATATCACCCGGGTC...TTCTTCTAAGAACAAAGCATGTAGGTGGTAGGGTCTGAGCCAGGAGTCCTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTGCTTCCAGATTCCTCTaGCAGTGCCTCGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPQLKNFQRQPILEPCSASRFL*QCLEKS Trigger: AGACTTCTCGAGGCACTGTCAGAGGAATCTGGAAGC...AGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTAATGTGACTTCCAGGTaGACAGCCTCCTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQNIFRARHHGEQDIQGNVTSR*TASWKW Trigger: CCACTTCCAGGAGGCTGTGCACCTGGAAGTCACATT...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCCATCGCTGGCCAATGTaGACACTGGAGGTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EANTQLYFYLFPHEVPFLHRWPM*TLEVQS Trigger: ACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATG...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCAGAAGCCAAGTACGTaGATGAGCTCATGTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGQKPST*MSSCRT Trigger: TGTCCTACATGAGCTCATGCACGTACTTGGCTTCTG...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGACTCCTGGCTCAGACCCTACCACCTACATGCTTTGTTCTTAGAAGAACATCTGAGGTGGTCTTaGCAAGGCTCCCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IEDSWLRPYHLHALFLEEHLRWS*QGSHTE Trigger: TTCAGTGTGGGAGCCTTGGCAAGACCACCTCAGATG...TTCTTCTAAGAACAAAGCATGTAGGTGGTAGGGTCTGAGCCAGGAGTCCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTCAAACCGGATGCATGTaGAACGTTCAAACTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGQTGCM*NVQTQQ Trigger: TTGCTGAGTTTGAACGTTTCACATGCATCCGGTTTG...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | AACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTAGGAGTGAAGCCTTCTaGAACACTGGTACTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTQLYFYLFPHEVPFLAGRSEAF*NTGTAD Trigger: GTCTGCAGTACCAGTGTTCCAGAAGGCTTCACTCCT...ACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTATCTTGGATAGGTGCTaGCTTGTCTCTGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANTQLYFYLFPHEVPFLAILDRC*LVSGFW Trigger: CCAGAAGCCAGAGACAAGCCAGCACCTATCCAAGAT...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTCTCTCAAAGGCATCTTaGATAGGTGCTGGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLQNIFRARHHGEQDIQGLSKAS*IGAGLS Trigger: AGACAAGCCAGCACCTATCCAAGATGCCTTTGAGAG...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTGATCTGACATTCACAAAGACTCAAGGCTGCTGTCCAGGGACTGGTGGTGTTCATCATACTTTCTaGAAAGCAGGAAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NSDLTFTKTQGCCPGTGGVHHTF*KAGRGS Trigger: AGATCCCCTTCCTGCTTTCCAGAAAGTATGATGAAC...ACCACCAGTCCCTGGACAGCAGCCTTGAGTCTTTGTGAATGTCAGATCACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | AACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTGTGCTGGCTTGTCTCTaGCTTCTGGAAATAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTQLYFYLFPHEVPFLAGVLACL*LLEIEQ Trigger: TTGCTCTATTTCCAGAAGCCAGAGACAAGCCAGCAC...ACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGTGCTGGCTTGTCTCTaGCTTCTGGAAATAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ANTQLYFYLFPHEVPFLAVLACL*LLEIEQ Trigger: TTGCTCTATTTCCAGAAGCCAGAGACAAGCCAGCAC...AGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTGGGCCATTTATTATTaGTCACTGACAACAATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GASPQLKNFQRQPILEPCWAIYY*SLTTIG Trigger: TCCGATTGTTGTCAGTGACCAATAATAAATGGCCCA...GCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCGTTCATCATACTTTCTaGAAAGCAGGAAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FISTFSHMKCPSSLVLVPVHHTF*KAGRGS Trigger: AGATCCCCTTCCTGCTTTCCAGAAAGTATGATGAAC...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCCTCTCAAAGGCATCTTaGATAGGTGCTGGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EANTQLYFYLFPHEVPFLLSKAS*IGAGLS Trigger: AGACAAGCCAGCACCTATCCAAGATGCCTTTGAGAG...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTTGGGCCATTTATTATTaGTCACTGACAACAATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPQLKNFQRQPILEPCSWAIYY*SLTTIG Trigger: TCCGATTGTTGTCAGTGACCAATAATAAATGGCCCA...AGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGTTCATCATACTTTCTaGAAAGCAGGAAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: EANTQLYFYLFPHEVPFLVHHTF*KAGRGS Trigger: AGATCCCCTTCCTGCTTTCCAGAAAGTATGATGAAC...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS GCA 90 bp | ATGCCTCGGCCCTTCCGGAGACAAGTGGGTGCCAAGGACACCACCTaGATCCCTCCACTGCGTCCCACACCAGAGAAACACCCCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: MPRPFRRQVGAKDTT*IPPLRPTPEKHPAI Trigger: TATGGCGGGGTGTTTCTCTGGTGTGGGACGCAGTGGAGGGATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGGAAGGGCCGAGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS CCA 90 bp | TGTAGACGTGATATAGAGGCAGGGGTGAGGCTGCTTCCATCACTCTaGGCCTCAAACCCTCTCCCGTGGGAGTCAGGGACACTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRRDIEAGVRLLPSL*ASNPLPWESGTLRL Trigger: CAGCCGGAGTGTCCCTGACTCCCACGGGAGAGGGTTTGAGGCCCAGAGTGATGGAAGCAGCCTCACCCCTGCCTCTATATCACGTCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 90 bp | GGATGCTCCCATCCTTGCTGGCTGTTACCAAGCCCGGCAATACTCTaGCCTCCAGTCCTGGAGCCACTAGGGGCAGAGCTTCCAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCSHPCWLLPSPAIL*PPVLEPLGAELPDS Trigger: GGAATCTGGAAGCTCTGCCCCTAGTGGCTCCAGGACTGGAGGCCAGAGTATTGCCGGGCTTGGTAACAGCCAGCAAGGATGGGAGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACTTGAGCTCGTTCCAGTTGACTaGGATGTAGCGGTCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RFQPQGFPLRSMPKAALELVPVD*DVAVPI Trigger: GATCGGGACCGCTACATCCAAGTCAACTGGAACGAG...CTCAAGTGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACCTGGGCCTGAGGATGCTCCCATCCTaGCTGGCTGTTACCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGWGCCGKRDQGSDLGLRMLPS*LAVTKP Trigger: GGGCTTGGTAACAGCCAGCAAGGATGGGAGCATCCT...CAGGCCCAGGTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS TCA 90 bp | CCCGATCTGCCCGTGAATGCTCATGCCAGAAGCCAAGTACGTGCATaGGCTCATGTAGGACAATGCCTCGGCCCTTCCGGAGACAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDLPVNAHARSQVRA*AHVGQCLGPSGDKW Trigger: CCACTTGTCTCCGGAAGGGCCGAGGCATTGTCCTACATGAGCTCATGCACGTACTTGGCTTCTGGCATGAGCATTCACGGGCAGATCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS TCA 90 bp | ACCCGGGTGATATCTGAGGTACTCAGGTTCCATCGCTGGCCAATGTaGACACTGGAGGTCCAGAGTGGTATGATGGTGGGCTGCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: TRVISEVLRFHRWPM*TLEVQSGMMVGCPR Trigger: GCGTGGGCAGCCCACCATCATACCACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATGGAACCTGAGTACCTCAGATATCACCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | GCCACTCCCAGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAAGGATGCTCCCATCCTaGCTGGCTGTTACCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATPRILSPCQASSRAKAQRMLPS*LAVTKP Trigger: GGGCTTGGTAACAGCCAGCAAGGATGGGAGCATCCT...TTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCTGGGAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS GCA 90 bp | GGAAATAGAGCAAGAGGTACAGTGGGGGCCTGGGCTAGCTGGAACTaGTCTAGAGACAAGCTGTCTGCACCTGCTCCAGGCCCCGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNRARGTVGAWASWN*SRDKLSAPAPGPDF Trigger: AAAATCGGGGCCTGGAGCAGGTGCAGACAGCTTGTCTCTAGAGCAGTTCCAGCTAGCCCAGGCCCCCACTGTACCTCTTGCTCTATTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAAAGCCCCTAGAGCCTCTAGGATGCTCCCATCCTaGCTGGCTGTTACCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AKHLPGLRLKPRKAPRASRMLPS*LAVTKP Trigger: GGGCTTGGTAACAGCCAGCAAGGATGGGAGCATCCT...AGAGGCTCTAGGGGCTTTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS TCA 90 bp | GACACTCCGGCTGCAGTTATACAGCCTGCAGACCCGGGTGATATCTaGGGTACTCAGGTTCCATCGCTGGCCAATGTGAACACTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DTPAAVIQPADPGDI*GTQVPSLANVNTGG Trigger: ACCTCCAGTGTTCACATTGGCCAGCGATGGAACCTGAGTACCTCAGATATCACCCGGGTCTGCAGGCTGTATAACTGCAGCCGGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACCTGGGCCTGCGTGACTTGATGAAGTaGATTTCAAAGCCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGWGCCGKRDQGSDLGLRDLMK*ISKPGR Trigger: CCTCCCGGGCTTTGAAATCAACTTCATCAAGTCACG...CAGGCCCAGGTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGGGTGGGGGTGTTGTGGGAAAAGAGACCAAGGAAGTGACCTGGGCCTGTGGATAGGTGCTGGCTaGTCTCTGGCTTCTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAGWGCCGKRDQGSDLGLWIGAG*SLASGN Trigger: ATTTCCAGAAGCCAGAGACAAGCCAGCACCTATCCA...CAGGCCCAGGTCACTTCCTTGGTCTCTTTTCCCACAACACCCCCACCCTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TATTCAAGGTTCCAGCCACAGGGCTTCCCACTGAGGTCCATGCCCAAGGCAGCACGTGACTTGATGAAGTaGATTTCAAAGCCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSRFQPQGFPLRSMPKAARDLMK*ISKPGR Trigger: CCTCCCGGGCTTTGAAATCAACTTCATCAAGTCACG...TGCTGCCTTGGGCATGGACCTCAGTGGGAAGCCCTGTGGCTGGAACCTTGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 90 bp | GGTGCACAGCCTCCTGGAAGTGGAGCTAGCCTCTCAAAGGCATCTTaGATAGGTGCTGGCTTGTCTCTGGCTTCTGGAAATAGAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAQPPGSGASLSKAS*IGAGLSLASGNRAR Trigger: TCTTGCTCTATTTCCAGAAGCCAGAGACAAGCCAGCACCTATCCAAGATGCCTTTGAGAGGCTAGCTCCACTTCCAGGAGGCTGTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGAACAGGACTTAATCCCAGGGCTTCAGAACATCTTTAGAGCCAGGCATCTCGTTCCAGTTGACTaGGATGTAGCGGTCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: PGEQDLIPGLQNIFRARHLVPVD*DVAVPI Trigger: GATCGGGACCGCTACATCCAAGTCAACTGGAACGAG...ATGCCTGGCTCTAAAGATGTTCTGAAGCCCTGGGATTAAGTCCTGTTCTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAATGGATAGGTGCTGGCTaGTCTCTGGCTTCTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RILSPCQASSRAKAQAKKWIGAG*SLASGN Trigger: ATTTCCAGAAGCCAGAGACAAGCCAGCACCTATCCA...TTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 90 bp | TTCTGGAAAGCAGGAAGGGGATCTCCACAAAGCCACCAACGCCCTTaGGCCATTTATTATTGGTCACTGACAACAATCGGAAAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FWKAGRGSPQSHQRP*AIYYWSLTTIGKGL Trigger: CAAGCCCTTTCCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGGAGATCCCCTTCCTGCTTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATCATGGAGAGCAGGATATTCAAGGTTCCAGCCACAGGGCTTCCCACTGTTGGGCCATTTATTATaGGTCACTGACAACAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: QASWRAGYSRFQPQGFPLLGHLL*VTDNNR Trigger: CCGATTGTTGTCAGTGACCAATAATAAATGGCCCAA...CAGTGGGAAGCCCTGTGGCTGGAACCTTGAATATCCTGCTCTCCATGATGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGTCCTCAGTTGAAGAACTTCCAGAGGCAACCAATACTGGAACCTTGCTCTCGTGACTTGATGAAGTaGATTTCAAAGCCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPQLKNFQRQPILEPCSRDLMK*ISKPGR Trigger: CCTCCCGGGCTTTGAAATCAACTTCATCAAGTCACG...AGAGCAAGGTTCCAGTATTGGTTGCCTCTGGAAGTTCTTCAACTGAGGACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTCTTGCCAAGGCCTCCACCATGCAGAGCTGATAAGGAACCATCTCTTGTTGGTACTCCGTGACTaGATGAAGTTGATTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WWSCQGLHHAELIRNHLLLVLRD*MKLISK Trigger: CTTTGAAATCAACTTCATCAAGTCACGGAGTACCAA...CAAGAGATGGTTCCTTATCAGCTCTGCATGGTGGAGGCCTTGGCAAGACCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGACTCCTGGCTCAGACCCTACCACCTACATGCTTTGTTCTTAGAAGAATGGATAGGTGCTGGCTaGTCTCTGGCTTCTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IEDSWLRPYHLHALFLEEWIGAG*SLASGN Trigger: ATTTCCAGAAGCCAGAGACAAGCCAGCACCTATCCA...TTCTTCTAAGAACAAAGCATGTAGGTGGTAGGGTCTGAGCCAGGAGTCCTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTGTCTCCATGCCAAGCATCTTCCAGGGCTAAGGCTCAAGCCAAGAAATTGGTACTCCGTGACTaGATGAAGTTGATTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RILSPCQASSRAKAQAKKLVLRD*MKLISK Trigger: CTTTGAAATCAACTTCATCAAGTCACGGAGTACCAA...TTTCTTGGCTTGAGCCTTAGCCCTGGAAGATGCTTGGCATGGAGACAGGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCGCTGGTTCTGGTTCCCTTGGGCCATTTATTATaGGTCACTGACAACAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: FISTFSHMKCPSSLVLVPLGHLL*VTDNNR Trigger: CCGATTGTTGTCAGTGACCAATAATAAATGGCCCAA...GGGAACCAGAACCAGCGAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTCAGAACATCTTTAGAGCCAGGCATCATGGAGAGCAGGATATTCAAGGTTTGGGCCATTTATTATaGGTCACTGACAACAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQNIFRARHHGEQDIQGLGHLL*VTDNNR Trigger: CCGATTGTTGTCAGTGACCAATAATAAATGGCCCAA...ACCTTGAATATCCTGCTCTCCATGATGCCTGGCTCTAAAGATGTTCTGAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAACACCCAACTTTATTTCTACCTTTTCCCACATGAAGTGCCCTTCCTCTTGGTACTCCGTGACTaGATGAAGTTGATTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EANTQLYFYLFPHEVPFLLVLRD*MKLISK Trigger: CTTTGAAATCAACTTCATCAAGTCACGGAGTACCAA...GAGGAAGGGCACTTCATGTGGGAAAAGGTAGAAATAAAGTTGGGTGTTTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS GCA 72 bp | CCCTTCCGGAGACAAGTGGGTGCCAAGGACACCACCTaGATCCCTCCACTGCGTCCCACACCAGAGAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: PFRRQVGAKDTT*IPPLRPTPEKH Trigger: GTGTTTCTCTGGTGTGGGACGCAGTGGAGGGATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS GCA 72 bp | GCAAGAGGTACAGTGGGGGCCTGGGCTAGCTGGAACTaGTCTAGAGACAAGCTGTCTGCACCTGCTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARGTVGAWASWN*SRDKLSAPAPG Trigger: GCCTGGAGCAGGTGCAGACAGCTTGTCTCTAGAGCAGTTCCAGCTAGCCCAGGCCCCCACTGTACCTCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 72 bp | CATGTAGGACAATGCCTCGGCCCTTCCGGAGACAAGTaGGTGCCAAGGACACCACCTGCATCCCTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: HVGQCLGPSGDK*VPRTPPASLHC Trigger: GCAGTGGAGGGATGCAGGTGGTGTCCTTGGCACCCACTTGTCTCCGGAAGGGCCGAGGCATTGTCCTACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS CCA 72 bp | CCATCGCTGGCCAATGTGAACACTGGAGGTCCAGAGTaGTATGATGGTGGGCTGCCCACGCCAGCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSLANVNTGGPE*YDGGLPTPAEG Trigger: GCCTTCAGCTGGCGTGGGCAGCCCACCATCATACCACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 72 bp | GATATAGAGGCAGGGGTGAGGCTGCTTCCATCACTCTaGGCCTCAAACCCTCTCCCGTGGGAGTCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: DIEAGVRLLPSL*ASNPLPWESGT Trigger: TGTCCCTGACTCCCACGGGAGAGGGTTTGAGGCCCAGAGTGATGGAAGCAGCCTCACCCCTGCCTCTATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CCA 72 bp | CATCCTTGCTGGCTGTTACCAAGCCCGGCAATACTCTaGCCTCCAGTCCTGGAGCCACTAGGGGCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HPCWLLPSPAIL*PPVLEPLGAEL Trigger: AAGCTCTGCCCCTAGTGGCTCCAGGACTGGAGGCCAGAGTATTGCCGGGCTTGGTAACAGCCAGCAAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS TCA 72 bp | CCCGTGAATGCTCATGCCAGAAGCCAAGTACGTGCATaGGCTCATGTAGGACAATGCCTCGGCCCTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVNAHARSQVRA*AHVGQCLGPSG Trigger: TCCGGAAGGGCCGAGGCATTGTCCTACATGAGCTCATGCACGTACTTGGCTTCTGGCATGAGCATTCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
||
| CDS TCA 72 bp | GGTGGTCTTGCCAAGGCTCCCACACTGAATGTGCTCTaGGGAGGATGCTCCCATCCTTGCTGGCTGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLAKAPTLNVL*GGCSHPCWLLP Trigger: TGGTAACAGCCAGCAAGGATGGGAGCATCCTCCTCAGAGCACATTCAGTGTGGGAGCCTTGGCAAGACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS CAA 72 bp | GAGACAAGCTGTCTGCACCTGCTCCAGGCCCCGATTTaGAAGCATCGGCTAGCATCTGAGGTGGTCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ETSCLHLLQAPI*KHRLASEVVLP Trigger: TGGCAAGACCACCTCAGATGCTAGCCGATGCTTCAAAATCGGGGCCTGGAGCAGGTGCAGACAGCTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
||
| CDS TCA 72 bp | GCTGCAGTTATACAGCCTGCAGACCCGGGTGATATCTaGGGTACTCAGGTTCCATCGCTGGCCAATGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AAVIQPADPGDI*GTQVPSLANVN Trigger: GTTCACATTGGCCAGCGATGGAACCTGAGTACCTCAGATATCACCCGGGTCTGCAGGCTGTATAACTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | TGTCTCTGGCTTCTGGAAATAGAGCAAGAGGTACAGTaGGGGCCTGGGCTAGCTGGAACTGCTCTAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: CLWLLEIEQEVQ*GPGLAGTALET Trigger: TGTCTCTAGAGCAGTTCCAGCTAGCCCAGGCCCCCACTGTACCTCTTGCTCTATTTCCAGAAGCCAGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| CDS TCA 72 bp | ATGAGCCCTTGGTTAATTGCGGGGATGTCCTTGTCCTaGAATACCGGGCTTCCCTCAGGAGTGAAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MSPWLIAGMSLS*NTGLPSGVKPS Trigger: AGAAGGCTTCACTCCTGAGGGAAGCCCGGTATTTCAGGACAAGGACATCCCCGCAATTAACCAAGGGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS TCA 72 bp | ATATCTGAGGTACTCAGGTTCCATCGCTGGCCAATGTaGACACTGGAGGTCCAGAGTGGTATGATGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ISEVLRFHRWPM*TLEVQSGMMVG Trigger: GCCCACCATCATACCACTCTGGACCTCCAGTGTTCACATTGGCCAGCGATGGAACCTGAGTACCTCAGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | CTGAAATACCGGGCTTCCCTCAGGAGTGAAGCCTTCTaGAACACTGGTACTGCAGACTCCAGAACATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LKYRASLRSEAF*NTGTADSRTSG Trigger: TCCAGATGTTCTGGAGTCTGCAGTACCAGTGTTCCAGAAGGCTTCACTCCTGAGGGAAGCCCGGTATTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | CCACAAAGCCACCAACGCCCTTGGGCCATTTATTATTaGTCACTGACAACAATCGGAAAGGGCTTGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PQSHQRPWAIYY*SLTTIGKGLAG Trigger: TCCGGCCAAGCCCTTTCCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | CCTCCTGGAAGTGGAGCTAGCCTCTCAAAGGCATCTTaGATAGGTGCTGGCTTGTCTCTGGCTTCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PPGSGASLSKAS*IGAGLSLASGN Trigger: ATTTCCAGAAGCCAGAGACAAGCCAGCACCTATCCAAGATGCCTTTGAGAGGCTAGCTCCACTTCCAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | CTTCTGGAACACTGGTACTGCAGACTCCAGAACATCTaGATGCTGAGGGTGCTCCCATGCTCAAACCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLEHWYCRLQNI*MLRVLPCSNLA Trigger: TGCTAGGTTTGAGCATGGGAGCACCCTCAGCATCCAGATGTTCTGGAGTCTGCAGTACCAGTGTTCCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089673.10 |
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| CDS CAA 72 bp | TCCACAAAGCCACCAACGCCCTTGGGCCATTTATTATaGGTCACTGACAACAATCGGAAAGGGCTTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: STKPPTPLGHLL*VTDNNRKGLGR Trigger: CCGGCCAAGCCCTTTCCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CCA 72 bp | GCAGGAAGGGGATCTCCACAAAGCCACCAACGCCCTTaGGCCATTTATTATTGGTCACTGACAACAATCGGA | + |
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Preference number: 6 (lower is better) Translates to: AGRGSPQSHQRP*AIYYWSLTTIG Trigger: TCCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGGAGATCCCCTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CAA 72 bp | AGCAGGAAGGGGATCTCCACAAAGCCACCAACGCCCTaGGGCCATTTATTATTGGTCACTGACAACAATCGG | + |
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Preference number: 6 (lower is better) Translates to: SRKGISTKPPTP*GHLLLVTDNNR Trigger: CCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGGAGATCCCCTTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CAA 90 bp | TTTCTGGAAAGCAGGAAGGGGATCTCCACAAAGCCACCAACGCCCTaGGGCCATTTATTATTGGTCACTGACAACAATCGGAAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FLESRKGISTKPPTP*GHLLLVTDNNRKGL Trigger: AAGCCCTTTCCGATTGTTGTCAGTGACCAATAATAAATGGCCCAAGGGCGTTGGTGGCTTTGTGGAGATCCCCTTCCTGCTTTCCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000156747.2 ENSMUST00000179618.8 |
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| CDS CAA 72 bp | GGAACTAACATATTGGTACTCCGTGACTTGATGAAGTaGATTTCAAAGCCCGGGAGGATCTCGTTCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GTNILVLRDLMK*ISKPGRISFQL Trigger: CAACTGGAACGAGATCCTCCCGGGCTTTGAAATCAACTTCATCAAGTCACGGAGTACCAATATGTTAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059839.9 ENSMUST00000089673.10 ENSMUST00000179618.8 |
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