Pregenerated sensors for ASRGL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024654Ensembl transcript IDs: ENSMUST00000049948.6
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTCATCTCTCCAGCCATCTGCCACCCCCGCTGTTGGAGAGGCTaGAAATGTCATGTGCCCTATCAAGCCCCAATGAGGACAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: GVISPAICHPRCWRG*KCHVPYQAPMRTTG Trigger: CCCAGTTGTCCTCATTGGGGCTTGATAGGGCACATGACATTTCCAGCCTCTCCAACAGCGGGGGTGGCAGATGGCTGGAGAGATGACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | GCAGACACATCACGGCAGACATGCCATTTCCTGAGTGCTGACAGGTaGACAGAGTGCTCTCCACCGAGGAGACTGCTTTCTGCGTCATGC | + |
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Preference number: 1 (lower is better) Translates to: ADTSRQTCHFLSADR*TECSPPRRLLSASC Trigger: GCATGACGCAGAAAGCAGTCTCCTCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCTGCCGTGATGTGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CCA 90 bp | CTTCAGCCCTACCATGGCTGCTGCTTCGTCTACTCTTACCTTCTCTaGTTCACAGGGCAGATCTCAAGCCTCTTCCTCAGTAACTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LQPYHGCCFVYSYLL*FTGQISSLFLSNSE Trigger: TTCTGAGTTACTGAGGAAGAGGCTTGAGATCTGCCCTGTGAACCAGAGAAGGTAAGAGTAGACGAAGCAGCAGCCATGGTAGGGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | TTTTCTCCAAAGGGTCTCTTCTCTCTTCAGCCCTACCATGGCTGCTaGTTCGTCTACTCTTACCTTCTCTGGTTCACAGGGCAGATCTCA | + |
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Preference number: 1 (lower is better) Translates to: FSPKGLFSLQPYHGC*FVYSYLLWFTGQIS Trigger: TGAGATCTGCCCTGTGAACCAGAGAAGGTAAGAGTAGACGAAGCAGCAGCCATGGTAGGGCTGAAGAGAGAAGAGACCCTTTGGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR TCA 90 bp | ATGAGAAATTCTCCAAAGCTAATGTTCCCAGGATCCTCTGGGAAGTaGGGAGAGGCAGCTTCAAGCTCAGTTCTCAGACTCCTCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: MRNSPKLMFPGSSGK*GEAASSSVLRLLST Trigger: AGTGCTGAGGAGTCTGAGAACTGAGCTTGAAGCTGCCTCTCCTCACTTCCCAGAGGATCCTGGGAACATTAGCTTTGGAGAATTTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | TTATTTTCTCCAAAGGGTCTCTTCTCTCTTCAGCCCTACCATGGCTaGTGCTTCGTCTACTCTTACCTTCTCTGGTTCACAGGGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: LFSPKGLFSLQPYHG*CFVYSYLLWFTGQI Trigger: GATCTGCCCTGTGAACCAGAGAAGGTAAGAGTAGACGAAGCAGCAGCCATGGTAGGGCTGAAGAGAGAAGAGACCCTTTGGAGAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR TCA 90 bp | GCATCTCTCATCGCTTCAGAACCCGACCCTCAACCAAGCATTCATTaGTTTACTGATCAAGGCAACAAAAGGAGGGACAGACTGCGTAAG | + |
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Preference number: 1 (lower is better) Translates to: ASLIASEPDPQPSIH*FTDQGNKRRDRLRK Trigger: CTTACGCAGTCTGTCCCTCCTTTTGTTGCCTTGATCAGTAAATCAATGAATGCTTGGTTGAGGGTCGGGTTCTGAAGCGATGAGAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR TCA 90 bp | GTCAGGACACACTATGAACTTGAGCAACGTGTTGGGAGACAGCCATaGGTCTGGCTGAGACTTGGAAATGCCTTAACACACTCAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VRTHYELEQRVGRQP*VWLRLGNALTHSEK Trigger: TTTCTCTGAGTGTGTTAAGGCATTTCCAAGTCTCAGCCAGACTCATGGCTGTCTCCCAACACGTTGCTCAAGTTCATAGTGTGTCCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CCA 90 bp | GGACAGGATCACCAAAGGAGGAATGAACTTAAAATAAGGATGCCGTaGGGCTGGGGAAATCCAAATTCATGTGAGTACAAGAGGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GQDHQRRNELKIRMP*GWGNPNSCEYKRRA Trigger: AGCCCTCCTCTTGTACTCACATGAATTTGGATTTCCCCAGCCCCACGGCATCCTTATTTTAAGTTCATTCCTCCTTTGGTGATCCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | CTTGTGCATGGTAAAATGGACAACTTCAAGATAAGACCTTCCACTTaGTTCTCTGCTCCCATCCCCTTTCCCTCCGAATATCTAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LVHGKMDNFKIRPST*FSAPIPFPSEYLGT Trigger: AGTCCCTAGATATTCGGAGGGAAAGGGGATGGGAGCAGAGAAGCAAGTGGAAGGTCTTATCTTGAAGTTGTCCATTTTACCATGCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CCA 90 bp | TTCATAGATGAGAAATTCTCCAAAGCTAATGTTCCCAGGATCCTCTaGGAAGTGAGGAGAGGCAGCTTCAAGCTCAGTTCTCAGACTCCT | + |
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Preference number: 1 (lower is better) Translates to: FIDEKFSKANVPRIL*EVRRGSFKLSSQTP Trigger: AGGAGTCTGAGAACTGAGCTTGAAGCTGCCTCTCCTCACTTCCCAGAGGATCCTGGGAACATTAGCTTTGGAGAATTTCTCATCTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | TCTTACCTGGGAGAGGGCTGGCTTCCATGTCTCTTGTTGTACAGTTaGCTAGGTTCTCGTCTTTTGGTTCTAATTATCCTACCATTTTGG | + |
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Preference number: 1 (lower is better) Translates to: SYLGEGWLPCLLLYS*LGSRLLVLIILPFW Trigger: CCAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAGCCAGCCCTCTCCCAGGTAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CCA 90 bp | GATCACCAAAGGAGGAATGAACTTAAAATAAGGATGCCGTGGGGCTaGGGAAATCCAAATTCATGTGAGTACAAGAGGAGGGCTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: DHQRRNELKIRMPWG*GNPNSCEYKRRALC Trigger: ACAAAGAGCCCTCCTCTTGTACTCACATGAATTTGGATTTCCCCAGCCCCACGGCATCCTTATTTTAAGTTCATTCCTCCTTTGGTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | CTACTAAACTCCACGAGGCAGGATATACTGCCACACTTACATTTCTaGAAAAGGTCCTCTCAACTATTATATCTGCCTGCGCTAAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LLNSTRQDILPHLHF*KRSSQLLYLPALKD Trigger: GTCCTTTAGCGCAGGCAGATATAATAGTTGAGAGGACCTTTTGCAGAAATGTAAGTGTGGCAGTATATCCTGCCTCGTGGAGTTTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR GCA 90 bp | ACACTTACATTTCTGCAAAAGGTCCTCTCAACTATTATATCTGCCTaGGCTAAAGGACCAAGAAGGGAGCTTGTATCTGTTCTGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: TLTFLQKVLSTIISA*AKGPRRELVSVLVL Trigger: CAAGACCAGAACAGATACAAGCTCCCTTCTTGGTCCTTTAGCGCAGGCAGATATAATAGTTGAGAGGACCTTTTGCAGAAATGTAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR TCA 90 bp | TATAGGCCTACAATCTCAGCACTTAGGAGGCTGAGGCTGAAGGATTaGGAAGTTAAAGGTCAGATTGTGCTATACAGAAAGATTCCATTA | + |
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Preference number: 1 (lower is better) Translates to: YRPTISALRRLRLKD*EVKGQIVLYRKIPL Trigger: TAATGGAATCTTTCTGTATAGCACAATCTGACCTTTAACTTCTCAATCCTTCAGCCTCAGCCTCCTAAGTGCTGAGATTGTAGGCCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CCA 90 bp | CAGATCTCAAGCCTCTTCCTCAGTAACTCAGAATATGACTACATTTaGGGACAGGATCACCAAAGGAGGAATGAACTTAAAATAAGGATG | + |
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Preference number: 1 (lower is better) Translates to: QISSLFLSNSEYDYI*GQDHQRRNELKIRM Trigger: CATCCTTATTTTAAGTTCATTCCTCCTTTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAAGAGGCTTGAGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | GGACCATCAGGTACCCCAGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGATCTCTCCAGCCATCTaGCACCCCCGCTGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPSGTPGPRCSVQEVRAEISPAI*HPRCWR Trigger: TCTCCAACAGCGGGGGTGGCAGATGGCTGGAGAGAT...CTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCTGGGGTACCTGATGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | AGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGTACCTACAGGTCTGCTATGGGGCTGGTTCAGGTaGGGCTGGCTTTTGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RTTLLSPRSQSRVPTGLLWGWFR*GWLLGA Trigger: GGCTCCCAAAAGCCAGCCCCACCTGAACCAGCCCCA...TAGCAGACCTGTAGGTACTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | AGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGTACCTACAGGTCTGCTACCCAATGAGGACAACTaGGGCTGGTTCAGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RTTLLSPRSQSRVPTGLLPNEDN*GWFRWG Trigger: GCCCCACCTGAACCAGCCCCAGTTGTCCTCATTGGG...TAGCAGACCTGTAGGTACTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGACACATCACGGCAGACATGCCATTTCCTGAGTGCTGACAGGTGCACAGAGACCACCCTGAACATTTaGTTCACTGCGCTTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: ADTSRQTCHFLSADRCTETTLNI*FTALGT Trigger: AGTCCCAAGCGCAGTGAATCAAATGTTCAGGGTGGT...CTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCTGCCGTGATGTGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTCTCCACCGAGGAGACTGCTTTCTGCGTCATGCTCACCACCCTGAACATAACTCTGTAACATTTTaGGCTTCACCTGGACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SALHRGDCFLRHAHHPEHNSVTF*ASPGPG Trigger: CCCAGGTCCAGGTGAAGCTCAAAATGTTACAGAGTT...ATGTTCAGGGTGGTGAGCATGACGCAGAAAGCAGTCTCCTCGGTGGAGAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAATTCACCTGCCTCTGCCTCCCAAGTGCAGAGAGCTTATTTGAAAACACCATTTCCTGAGTGCTaGCAGGTGCACAGAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PRNSPASASQVQRAYLKTPFPEC*QVHRVL Trigger: GAGCACTCTGTGCACCTGTCAGCACTCAGGAAATGG...TGTTTTCAAATAAGCTCTCTGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGTTCTCAGACTCCTCAGCACTCTCTTTAATGCAGGGCAGATACAGGCTAGACATGCCATTTCCTaGGTGCTGACAGGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SSVLRLLSTLFNAGQIQARHAIS*VLTGAQ Trigger: CTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCT...AGCCTGTATCTGCCCTGCATTAAAGAGAGTGCTGAGGAGTCTGAGAACTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTCTGAGTGCTGACAGGTaGACAGAGTGCTCTCCACCG | + |
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Preference number: 2 (lower is better) Translates to: PLSLRISRDCYFLQRVSSLSADR*TECSPP Trigger: CGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAG...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCAGTAACTCAGAATATGACTACATTTGGGGACAGGATCACCAAAGGAGGGAGGACAACTGGGGCTaGTTCAGGTGGGGCTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLSNSEYDYIWGQDHQRREDNWG*FRWGWL Trigger: AAGCCAGCCCCACCTGAACCAGCCCCAGTTGTCCTC...CCTCCTTTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | ATGTCATGTGCCCTATCAAGCCCCAATGAGGACAACTGGGGCTGGTTCAGGTGGAAAGGAGGGACAGACTaGGTAAGTTTTCCATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: MSCALSSPNEDNWGWFRWKGGTD*VSFPCL Trigger: TAGACATGGAAAACTTACGCAGTCTGTCCCTCCTTT...CCACCTGAACCAGCCCCAGTTGTCCTCATTGGGGCTTGATAGGGCACATGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCACAGGGCAGATCTCAAGCCTCTTCCTCAGTAACTCAGAATATGACTACTGCCACCCCCGCTGTTaGAGAGGCTGGAAATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: WFTGQISSLFLSNSEYDYCHPRC*RGWKCH Trigger: ATGACATTTCCAGCCTCTCCAACAGCGGGGGTGGCA...GTAGTCATATTCTGAGTTACTGAGGAAGAGGCTTGAGATCTGCCCTGTGAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CATTTCCTGAGTGCTGACAGGTGCACAGAGTGCTCTCCACCGAGGAGACTGCTTTGTGTTGGAGAAGTTTaGGCTTTTTGGATAAAGATC | + |
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Preference number: 2 (lower is better) Translates to: HFLSADRCTECSPPRRLLCVGEV*AFWIKI Trigger: GATCTTTATCCAAAAAGCTCAAACTTCTCCAACACA...AAGCAGTCTCCTCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCAGTAACTCAGAATATGACTACATTTGGGGACAGGATCACCAAAGGAGGCACCAGGCAGGATGGTaGATGTCTATAGGCCTACAA | + |
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Preference number: 2 (lower is better) Translates to: FLSNSEYDYIWGQDHQRRHQAGW*MSIGLQ Trigger: TTGTAGGCCTATAGACATGCACCATCCTGCCTGGTG...CCTCCTTTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CAA 90 bp | CTCTTACCTGGGAGAGGGCTGGCTTCCATGTCTCTTGTTGTACAGTaGCCTAGGTTCTCGTCTTTTGGTTCTAATTATCCTACCATTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLPGRGLASMSLVVQ*PRFSSFGSNYPTIL Trigger: CAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAGCCAGCCCTCTCCCAGGTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CAACCAACAAACCAGTCAAAGAACCAGAAACAAGCAAAACCCCCATTTGTTGATGCTAGACTAAGAAGCTaGGCAGACACATCACGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QPTNQSKNQKQAKPPFVDARLRS*ADTSRQ Trigger: CTGCCGTGATGTGTCTGCTCAGCTTCTTAGTCTAGC...ATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCTTTGACTGGTTTGTTGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGGCAATTTACCTGTCTGTTCCCAGGATCCTCTaGGAAGTGAGGAGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SNYPTILACSDQMAIYLSVPRIL*EVRRGS Trigger: GCTGCCTCTCCTCACTTCCCAGAGGATCCTGGGAAC...AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAATTCACCTGCCTCTGCCTCCCAAGTGCAGAGAGCTTATTTGAAAACAGAGAGAACATATTTCTaGAAATTAAGTCACCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRNSPASASQVQRAYLKTERTYF*KLSHPA Trigger: GGCTGGGTGACTTAATTTTCAGAAATATGTTCTCTC...TGTTTTCAAATAAGCTCTCTGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCCATGTCTCTTGTTGTACAGTTGCCTAGGTTCTCGTCTTTTGGTTCTAATTATAAGACCTTCCACTTaGTTCTCTGCTCCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LPCLLLYSCLGSRLLVLIIRPST*FSAPIP Trigger: GGGGATGGGAGCAGAGAAGCAAGTGGAAGGTCTTAT...AATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATCTGTTCTGGTCTTGGTCAAAGTGACACCTAACCACACTCTTTTCTTTACTGTCCTAAAGCGCTaGCAGCTACTCCTTAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LVSVLVLVKVTPNHTLFFTVLKR*QLLLSD Trigger: GTCACTAAGGAGTAGCTGCCAGCGCTTTAGGACAGT...AAAGAAAAGAGTGTGGTTAGGTGTCACTTTGACCAAGACCAGAACAGATACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTCAACCAAGCATTCATTaGTTTACTGATCAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PLSLRISRDCYFLQRVSSQPSIH*FTDQGN Trigger: GTTGCCTTGATCAGTAAATCAATGAATGCTTGGTTG...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTCCACACTTACATTTCTaGAAAAGGTCCTCTCAACTA | + |
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Preference number: 2 (lower is better) Translates to: PLSLRISRDCYFLQRVSSPHLHF*KRSSQL Trigger: TAGTTGAGAGGACCTTTTGCAGAAATGTAAGTGTGG...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTTCCTCAGTAACTCAGAATATGACTACATTTGGGGACAGGATCACCAAATTTTGAGCTTCACCTaGACCTGGGTCTTTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: SLFLSNSEYDYIWGQDHQILSFT*TWVFLT Trigger: TGTAAGAAAGACCCAGGTCCAGGTGAAGCTCAAAAT...TTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAAGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR CAA 90 bp | TGGCTTCCATGTCTCTTGTTGTACAGTTGCCTAGGTTCTCGTCTTTaGGTTCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGG | + |
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Preference number: 2 (lower is better) Translates to: WLPCLLLYSCLGSRL*VLIILPFWLVVTKW Trigger: CCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CTTGTATCTGTTCTGGTCTTGGTCAAAGTGACACCTAACCACACTCTTTTCTTTCTAGCCTCTGCAAAGTaGCATTCTCCCAATCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LVSVLVLVKVTPNHTLFFLASAK*HSPNPN Trigger: ATTTGGATTGGGAGAATGGCACTTTGCAGAGGCTAG...AAAGAAAAGAGTGTGGTTAGGTGTCACTTTGACCAAGACCAGAACAGATACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTTCAGAGAAAGTTCAATaGTCTAAAACACTCCCTACT | + |
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Preference number: 2 (lower is better) Translates to: PLSLRISRDCYFLQRVSSSEKVQ*SKTLPT Trigger: AGTAGGGAGTGTTTTAGAGCATTGAACTTTCTCTGA...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCCATGTCTCTTGTTGTACAGTTGCCTAGGTTCTCGTCTTTTGGTTCTAATTGCTGAGACTTGGAAATaGCTTAACACACTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPCLLLYSCLGSRLLVLIAETWK*LNTLRE Trigger: TTCTCTGAGTGTGTTAAGGCATTTCCAAGTCTCAGC...AATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR GCA 90 bp | TCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGGCAATTTACCTGTCTCCTGTCAGTTTCAGATaGTGTATAGGCCAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SNYPTILACSDQMAIYLSPVSFR*CIGQTP Trigger: AGGAGTCTGGCCTATACAGCATCTGAAACTGACAGG...AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCCATGTCTCTTGTTGTACAGTTGCCTAGGTTCTCGTCTTTTGGTTCTAATTTCCAGAGGATCCTTATaGTACCCTAAGTTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPCLLLYSCLGSRLLVLISRGSL*YPKFFF Trigger: GAAGAAAAACTTAGGGTATCATAAGGATCCTCTGGA...AATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
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| 3UTR-3UTR CCA 90 bp | TCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGGCAATTTACCTGTCTTACTCTTACCTTCTCTaGTTCACAGGGCAGATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SNYPTILACSDQMAIYLSYSYLL*FTGQIS Trigger: TGAGATCTGCCCTGTGAACCAGAGAAGGTAAGAGTA...AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 90 bp | CAACAAACCAGTCAAAGAACCAGAAACAAGCAAAACCCCCATTTGTaGATGTTGGATTTCCAGTGTCTAGAACTGAGAGAACATATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QQTSQRTRNKQNPHL*MLDFQCLELREHIS Trigger: AGAAATATGTTCTCTCAGTTCTAGACACTGGAAATCCAACATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCTTTGACTGGTTTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CCA 90 bp | CAACCAACAAACCAGTCAAAGAACCAGAAACAAGCAAAACCCCCATTTGTTGATTCTCACACTGGGGACTaGTTATCATTTTTGAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: QPTNQSKNQKQAKPPFVDSHTGD*LSFLNL Trigger: CAAATTCAAAAATGATAACCAGTCCCCAGTGTGAGA...ATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCTTTGACTGGTTTGTTGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGGCAATTTACCTGTCTACTGGTTATCATTTTTaGATTTGTCCAGAGGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: SNYPTILACSDQMAIYLSTGYHF*ICPEDP Trigger: AGGATCCTCTGGACAAATTCAAAAATGATAACCAGT...AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | TCTCCAGCCATCTGCCACCCCCGCTGTTGGAGAGGCTaGAAATGTCATGTGCCCTATCAAGCCCCAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAICHPRCWRG*KCHVPYQAPMR Trigger: CCTCATTGGGGCTTGATAGGGCACATGACATTTCCAGCCTCTCCAACAGCGGGGGTGGCAGATGGCTGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR TCA 72 bp | GCTGAGCAGACACATCACGGCAGACATGCCATTTCCTaGGTGCTGACAGGTGCACAGAGTGCTCTCCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: AEQTHHGRHAIS*VLTGAQSALHR Trigger: TCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCTGCCGTGATGTGTCTGCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | CAAAGGGGTGGACCATCAGGTACCCCAGGACCACGCTaGTCAGTCCAAGAAGTCAGAGCAGAGTACCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: QRGGPSGTPGPR*SVQEVRAEYLQ Trigger: CTGTAGGTACTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCTGGGGTACCTGATGGTCCACCCCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | ACATGCCATTTCCTGAGTGCTGACAGGTGCACAGAGTaGTCTCCACCGAGGAGACTGCTTTCTGCGTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: TCHFLSADRCTE*SPPRRLLSASC Trigger: GCATGACGCAGAAAGCAGTCTCCTCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | TCACGGCAGACATGCCATTTCCTGAGTGCTGACAGGTaGACAGAGTGCTCTCCACCGAGGAGACTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRQTCHFLSADR*TECSPPRRLLS Trigger: AGAAAGCAGTCTCCTCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCTGCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | CTGCGTCATGCTCACCACCCTGAACATTTGATTCACTaGGCTTGGGACTGTCCTAAAGCGCTGGCAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LRHAHHPEHLIH*AWDCPKALAAT Trigger: AGTAGCTGCCAGCGCTTTAGGACAGTCCCAAGCGCAGTGAATCAAATGTTCAGGGTGGTGAGCATGACGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | AAGGGTCTCTTCTCTCTTCAGCCCTACCATGGCTGCTaGTTCGTCTACTCTTACCTTCTCTGGTTCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KGLFSLQPYHGC*FVYSYLLWFTG Trigger: CCCTGTGAACCAGAGAAGGTAAGAGTAGACGAAGCAGCAGCCATGGTAGGGCTGAAGAGAGAAGAGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | TACAAGGTAGAGGCCCTCTCTTACCTGGGAGAGGGCTaGCTTCCATGTCTCTTGTTGTACAGTTGCCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YKVEALSYLGEG*LPCLLLYSCLG Trigger: ACCTAGGCAACTGTACAACAAGAGACATGGAAGCCAGCCCTCTCCCAGGTAAGAGAGGGCCTCTACCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CAA 90 bp | GGACAACTTCAAGATAAGACCTTCCACTTGCTTCTCTGCTCCCATCCCCTTTCCAGGTGGGGCTGGCTTTaGGGAGCCAAGAAAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: GQLQDKTFHLLLCSHPLSRWGWL*GAKKNP Trigger: GGGATTTTTCTTGGCTCCCAAAAGCCAGCCCCACCT...GGAAAGGGGATGGGAGCAGAGAAGCAAGTGGAAGGTCTTATCTTGAAGTTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CAA 90 bp | CACGTTAAAGGTAATCAGTTTCTTCCCAGAGAGAAGGGGATCCCTGCTAGACTACTGCCACCCCCGCTGTaGGAGAGGCTGGAAATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVKGNQFLPREKGIPARLLPPPL*ERLEMS Trigger: TGACATTTCCAGCCTCTCCAACAGCGGGGGTGGCAG...TAGTCTAGCAGGGATCCCCTTCTCTCTGGGAAGAAACTGATTACCTTTAACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR TCA 72 bp | TCTCCAAAGCTAATGTTCCCAGGATCCTCTGGGAAGTaGGGAGAGGCAGCTTCAAGCTCAGTTCTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: SPKLMFPGSSGK*GEAASSSVLRL Trigger: GAGTCTGAGAACTGAGCTTGAAGCTGCCTCTCCTCACTTCCCAGAGGATCCTGGGAACATTAGCTTTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | GGACAACTTCAAGATAAGACCTTCCACTTGCTTCTCTaGTCCCATCCCCTTTCCCTCCGAATATCTAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GQLQDKTFHLLL*SHPLSLRISRD Trigger: GTCCCTAGATATTCGGAGGGAAAGGGGATGGGAGCAGAGAAGCAAGTGGAAGGTCTTATCTTGAAGTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | TTCTCCAAAGGGTCTCTTCTCTCTTCAGCCCTACCATaGCTGCTGCTTCGTCTACTCTTACCTTCTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSKGSLLSSALP*LLLRLLLPSLV Trigger: AACCAGAGAAGGTAAGAGTAGACGAAGCAGCAGCCATGGTAGGGCTGAAGAGAGAAGAGACCCTTTGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATGTGCCCTATCAAGCCCCAATGAGGACAACTGGGGCTGGTTCAGGTGGACAAAGAGAACCTTCTaGAACATCTTGTCCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: MSCALSSPNEDNWGWFRWTKRTF*NILSSV Trigger: AACACTGGACAAGATGTTCAAGAAGGTTCTCTTTGT...CCACCTGAACCAGCCCCAGTTGTCCTCATTGGGGCTTGATAGGGCACATGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR TCA 72 bp | CACTATGAACTTGAGCAACGTGTTGGGAGACAGCCATaGGTCTGGCTGAGACTTGGAAATGCCTTAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HYELEQRVGRQP*VWLRLGNALTH Trigger: GTGTGTTAAGGCATTTCCAAGTCTCAGCCAGACTCATGGCTGTCTCCCAACACGTTGCTCAAGTTCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | CTGTATAGGCCAGACTCCTCTTGGGTGCCTATAAGCTaGCTATATATTGTAGTTTGCTGCCCTCTTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYRPDSSWVPIS*LYIVVCCPLVV Trigger: CACCACAAGAGGGCAGCAAACTACAATATATAGGCAGCTTATAGGCACCCAAGAGGAGTCTGGCCTATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | GAGAAATTCTCCAAAGCTAATGTTCCCAGGATCCTCTaGGAAGTGAGGAGAGGCAGCTTCAAGCTCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EKFSKANVPRIL*EVRRGSFKLSS Trigger: AGAACTGAGCTTGAAGCTGCCTCTCCTCACTTCCCAGAGGATCCTGGGAACATTAGCTTTGGAGAATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAAATTCACCTGCCTCTGCCTCCCAAGTGCAGAGAGCTTATTTGAAAACAGTGCCCAGATATGTGTaGGAGAAGTTTGAGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRNSPASASQVQRAYLKTVPRYV*EKFELF Trigger: AAAAAGCTCAAACTTCTCCAACACATATCTGGGCAC...TGTTTTCAAATAAGCTCTCTGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR TCA 72 bp | ATCGCTTCAGAACCCGACCCTCAACCAAGCATTCATTaGTTTACTGATCAAGGCAACAAAAGGAGGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: IASEPDPQPSIH*FTDQGNKRRDR Trigger: TCTGTCCCTCCTTTTGTTGCCTTGATCAGTAAATCAATGAATGCTTGGTTGAGGGTCGGGTTCTGAAGCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | TCCACGAGGCAGGATATACTGCCACACTTACATTTCTaGAAAAGGTCCTCTCAACTATTATATCTGCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: STRQDILPHLHF*KRSSQLLYLPA Trigger: CGCAGGCAGATATAATAGTTGAGAGGACCTTTTGCAGAAATGTAAGTGTGGCAGTATATCCTGCCTCGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | CTTTGTGTTCTAAAAACCTCTCACCAGGCAGGATGGTaGATGTCTATAGGCCTACAATCTCAGCACTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCVLKTSHQAGW*MSIGLQSQHLG Trigger: TCCTAAGTGCTGAGATTGTAGGCCTATAGACATGCACCATCCTGCCTGGTGAGAGGTTTTTAGAACACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | GGAGAGGGCTGGCTTCCATGTCTCTTGTTGTACAGTTaGCTAGGTTCTCGTCTTTTGGTTCTAATTATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GEGWLPCLLLYS*LGSRLLVLIIL Trigger: TAGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAGCCAGCCCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | GCTCTTTGTGTTCTAAAAACCTCTCACCAGGCAGGATaGTGCATGTCTATAGGCCTACAATCTCAGCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALCVLKTSHQAG*CMSIGLQSQHL Trigger: TAAGTGCTGAGATTGTAGGCCTATAGACATGCACCATCCTGCCTGGTGAGAGGTTTTTAGAACACAAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | AGGAGGAATGAACTTAAAATAAGGATGCCGTGGGGCTaGGGAAATCCAAATTCATGTGAGTACAAGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRNELKIRMPWG*GNPNSCEYKRR Trigger: CCTCCTCTTGTACTCACATGAATTTGGATTTCCCCAGCCCCACGGCATCCTTATTTTAAGTTCATTCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTCCCCATTTGTTGATGTaGGATTTCCAGTGTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLSLRISRDCYFLQRVSSPHLLM*DFQCLE Trigger: TTCTAGACACTGGAAATCCAACATCAACAAATGGGG...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | AGCAGCTGCGGCATACGAGGCTTTCAAGTTTCTAAATaGATAATTGTTCTCACACTGGGGACTGGTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSCGIRGFQVSK*IIVLTLGTGYH Trigger: ATGATAACCAGTCCCCAGTGTGAGAACAATTATGCATTTAGAAACTTGAAAGCCTCGTATGCCGCAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | CACCAAAGGAGGAATGAACTTAAAATAAGGATGCCGTaGGGCTGGGGAAATCCAAATTCATGTGAGTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: HQRRNELKIRMP*GWGNPNSCEYK Trigger: CTTGTACTCACATGAATTTGGATTTCCCCAGCCCCACGGCATCCTTATTTTAAGTTCATTCCTCCTTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | TTTCTGCAAAAGGTCCTCTCAACTATTATATCTGCCTaGGCTAAAGGACCAAGAAGGGAGCTTGTATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FLQKVLSTIISA*AKGPRRELVSV Trigger: AACAGATACAAGCTCCCTTCTTGGTCCTTTAGCGCAGGCAGATATAATAGTTGAGAGGACCTTTTGCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR GCA 72 bp | CACCTCTTAACAATATGCTTTCCGAGAATCAGCAGCTaGGGCATACGAGGCTTTCAAGTTTCTAAATGCATA | + |
|
Preference number: 3 (lower is better) Translates to: HLLTICFPRISS*GIRGFQVSKCI Trigger: TATGCATTTAGAAACTTGAAAGCCTCGTATGCCGCAGCTGCTGATTCTCGGAAAGCATATTGTTAAGAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CCA 72 bp | GGTTCTCGTCTTTTGGTTCTAATTATCCTACCATTTTaGCTTGTAGTGACCAAATGGCAATTTACCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSRLLVLIILPF*LVVTKWQFTCL Trigger: AAGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | CCCAGGATCCTCTGGGAAGTGAGGAGAGGCAGCTTCAAGCTCAGTTCTCAGACTTGCCGGCCTGCAGCTTaGCATTCTTCACCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRILWEVRRGSFKLSSQTCRPAA*HSSPLP Trigger: GGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCA...AGTCTGAGAACTGAGCTTGAAGCTGCCTCTCCTCACTTCCCAGAGGATCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | GCAGACACATCACGGCAGACATGCCATTTCCTGAGTGCTGACAGGTGCACAGAGAAGCCAAGTTTCCTCTaGAGTCCAAGGCAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADTSRQTCHFLSADRCTEKPSFL*SPRQQH Trigger: GTGCTGTTGCCTTGGACTGCAGAGGAAACTTGGCTT...CTCTGTGCACCTGTCAGCACTCAGGAAATGGCATGTCTGCCGTGATGTGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTCCGCTGCCCAGGGCATaGAGGCAGAGGTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLRISRDCYFLQRVSSPLPRA*RQRSTL Trigger: CAAAGTGGACCTCTGCCTCCATGCCCTGGGCAGCGG...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | GACTGCTTTCTGCGTCATGCTCACCACCCTGAACATTaGATTCACTGCGCTTGGGACTGTCCTAAAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCFLRHAHHPEH*IHCAWDCPKAL Trigger: CAGCGCTTTAGGACAGTCCCAAGCGCAGTGAATCAAATGTTCAGGGTGGTGAGCATGACGCAGAAAGCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR TCA 90 bp | GGACCATCAGGTACCCCAGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGCCAGTCAGAAAGCAATaGGGTGTCTTTTCCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: GPSGTPGPRCSVQEVRAEPVRKQ*GVFSIT Trigger: TGTTATGGAAAAGACACCTCATTGCTTTCTGACTGG...CTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCTGGGGTACCTGATGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | AAATCTAACACCTCCTTTCTAGCCTTACATGATGGAGATGTAGGCTCCTCAAGGGCCATTCTTCACCGCTaGCCAGGGCATGGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSNTSFLALHDGDVGSSRAILHR*PGHGGR Trigger: TCTGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGC...CCTTGAGGAGCCTACATCTCCATCATGTAAGGCTAGAAAGGAGGTGTTAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTTCCTCAGTAACTCAGAATATGACTACATTTGGGGACAGGATCACCAAGGCAGACACTGCACCTaGAGACAGGTCCTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLFLSNSEYDYIWGQDHQGRHCT*RQVLPI Trigger: GATGGGAAGGACCTGTCTGCAGGTGCAGTGTCTGCC...TTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAAGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | CATTTCCTGAGTGCTGACAGGTGCACAGAGTGCTCTCCACCGAGGAGACTGCTTAATCCCCATGTCTTCTaGAAATTTCTCTGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: HFLSADRCTECSPPRRLLNPHVF*KFLCTM Trigger: CATGGTGCAGAGAAATTTGCAGAAGACATGGGGATT...AAGCAGTCTCCTCGGTGGAGAGCACTCTGTGCACCTGTCAGCACTCAGGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR TCA 90 bp | CACGTTAAAGGTAATCAGTTTCTTCCCAGAGAGAAGGGGATCCCTGCTAGACTACCCATGTCCTGTGGTTaGAACGGCTCCAAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HVKGNQFLPREKGIPARLPMSCG*NGSKVI Trigger: AATAACCTTGGAGCCGTTTCAACCACAGGACATGGG...TAGTCTAGCAGGGATCCCCTTCTCTCTGGGAAGAAACTGATTACCTTTAACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCCTCCGAATATCTAGGGACTGTTATTTTCTCCAAAGGGTCTCTTCTACCTGCGTTGAACTCTaGGTCGTTTTCCAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLRISRDCYFLQRVSSTCVEL*VVFQDS Trigger: ACTGTCCTGGAAAACGACCCAGAGTTCAACGCAGGT...AGAAGAGACCCTTTGGAGAAAATAACAGTCCCTAGATATTCGGAGGGAAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | CTTGTATCTGTTCTGGTCTTGGTCAAAGTGACACCTAACCACACTCTTTTCTTTAGGTCAATGCCGGCCTaGAGCTTGCCATTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVSVLVLVKVTPNHTLFFRSMPA*SLPFFT Trigger: GGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCT...AAAGAAAAGAGTGTGGTTAGGTGTCACTTTGACCAAGACCAGAACAGATACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CCA 90 bp | AAATCTAACACCTCCTTTCTAGCCTTACATGATGGAGATGTAGGCTCCTCAAGGTTCTACAGGGACCTGTaGAATCCCCATGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSNTSFLALHDGDVGSSRFYRDL*NPHVFC Trigger: GCAGAAGACATGGGGATTCCACAGGTCCCTGTAGAA...CCTTGAGGAGCCTACATCTCCATCATGTAAGGCTAGAAAGGAGGTGTTAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | GGGAGAGGGCTGGCTTCCATGTCTCTTGTTGTACAGTaGCCTAGGTTCTCGTCTTTTGGTTCTAATTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGLASMSLVVQ*PRFSSFGSNYP Trigger: AGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACATGGAAGCCAGCCCTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTTCCTCAGTAACTCAGAATATGACTACATTTGGGGACAGGATCACCAACTTCATGTAATCCAATaGCAACTGAGCAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLFLSNSEYDYIWGQDHQLHVIQ*QLSSLL Trigger: GAGGAGGCTGCTCAGTTGGCATTGGATTACATGAAG...TTGGTGATCCTGTCCCCAAATGTAGTCATATTCTGAGTTACTGAGGAAGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCTGTTCTGGTCTTGGTCAAAGTGACACCTAACCACACTCTTTTCTTTGGAAGAGGGCAAGTCTaGCCAGATTCACCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSVLVLVKVTPNHTLFFGRGQV*PDSPSG Trigger: TCCTGAAGGTGAATCTGGCCAGACTTGCCCTCTTCC...AAAGAAAAGAGTGTGGTTAGGTGTCACTTTGACCAAGACCAGAACAGATACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | AAAGGACCAAGAAGGGAGCTTGTATCTGTTCTGGTCTaGGTCAAAGTGACACCTAACCACACTCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGPRRELVSVLV*VKVTPNHTLFF Trigger: AAAGAAAAGAGTGTGGTTAGGTGTCACTTTGACCAAGACCAGAACAGATACAAGCTCCCTTCTTGGTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | ACCAGTCAAAGAACCAGAAACAAGCAAAACCCCCATTaGTTGATGTTGGATTTCCAGTGTCTAGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSQRTRNKQNPH*LMLDFQCLELR Trigger: TCTCAGTTCTAGACACTGGAAATCCAACATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCTTTGACTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | CTTACATTTCTGCAAAAGGTCCTCTCAACTATTATATCTGCCTGCGCTAAAGGATTCCATAACAAGCCGTaGAAGTTTAACGGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTFLQKVLSTIISACAKGFHNKP*KFNGIC Trigger: GCAAATCCCGTTAAACTTGCACGGCTTGTTATGGAA...TCCTTTAGCGCAGGCAGATATAATAGTTGAGAGGACCTTTTGCAGAAATGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTCTTCCATTTCTAGTGAAATACTTATGGATTTCACTAGAAAACACACAGCAGTCAGCATTCTGTaGTCCCTTCTCAAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WWSSISSEILMDFTRKHTAVSIL*SLLKLL Trigger: GAGAAGCTTGAGAAGGGAGCACAGAATGCTGACTGC...TGTGTGTTTTCTAGTGAAATCCATAAGTATTTCACTAGAAATGGAAGACCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | AGTCAAAGAACCAGAAACAAGCAAAACCCCCATTTGTaGATGTTGGATTTCCAGTGTCTAGAACTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRTRNKQNPHL*MLDFQCLELRE Trigger: TTCTCTCAGTTCTAGACACTGGAAATCCAACATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCTTTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | TGTCTCTTGTTGTACAGTTGCCTAGGTTCTCGTCTTTaGGTTCTAATTATCCTACCATTTTGGCTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLLYSCLGSRL*VLIILPFWLVV Trigger: CACTACAAGCCAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACCTAGGCAACTGTACAACAAGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CCA 90 bp | TCTAATTATCCTACCATTTTGGCTTGTAGTGACCAAATGGCAATTTACCTGTCTTCTCCAGGTGCTTCTTaGTTCTCTCAGTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNYPTILACSDQMAIYLSSPGAS*FSQLSV Trigger: AACTGATAACTGAGAGAACCAAGAAGCACCTGGAGA...AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | AGAACCAGAAACAAGCAAAACCCCCATTTGTTGATGTaGGATTTCCAGTGTCTAGAACTGAGAGAACATATT | + |
|
Preference number: 4 (lower is better) Translates to: RTRNKQNPHLLM*DFQCLELREHI Trigger: AATATGTTCTCTCAGTTCTAGACACTGGAAATCCAACATCAACAAATGGGGGTTTTGCTTGTTTCTGGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| 3UTR CAA 72 bp | AGGTTCTCGTCTTTTGGTTCTAATTATCCTACCATTTaGGCTTGTAGTGACCAAATGGCAATTTACCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSSFGSNYPTI*ACSDQMAIYLS Trigger: AGACAGGTAAATTGCCATTTGGTCACTACAAGCCAAAATGGTAGGATAATTAGAACCAAAAGACGAGAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS TCA 90 bp | CAGTCACGGCTCCTTCCACAGCATCTACCGCGCTCCCTCCCGCCTTaGGGATTTTGTAGCCCTCGGTTGCCGCTCTGGCGATGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRLLPQHLPRSLPP*GFCSPRLPLWRCPR Trigger: GCGAGGGCATCGCCAGAGCGGCAACCGAGGGCTACAAAATCCTCAAGGCGGGAGGGAGCGCGGTAGATGCTGTGGAAGGAGCCGTGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | ATCTACCGCGCTCCCTCCCGCCTTGAGGATTTTGTAGCCCTCGGTTaGCGCTCTGGCGATGCCCTCGCGCACCAGCTCTTTCCGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IYRAPSRLEDFVALG*RSGDALAHQLFPVG Trigger: GCCAACCGGAAAGAGCTGGTGCGCGAGGGCATCGCCAGAGCGGCAACCGAGGGCTACAAAATCCTCAAGGCGGGAGGGAGCGCGGTAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | GGTCCCTTGTCCTGGTCTCACAGAGGTCAATGCCGGCCTGCAGCTTaGCATTCTTCACCGCTGCCCAGGGCATGGAGGCAGAGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GPLSWSHRGQCRPAA*HSSPLPRAWRQRST Trigger: AGTGGACCTCTGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGACAAGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | CAAGGTAGGTCCCTTGTCCTGGTCTCACAGAGGTCAATGCCGGCCTaGAGCTTGCCATTCTTCACCGCTGCCCAGGGCATGGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGRSLVLVSQRSMPA*SLPFFTAAQGMEAE Trigger: CTCTGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGACAAGGGACCTACCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CAA 90 bp | GGACCATCAGGTACCCCAGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGCAGTCTCCTGTTTTGTaGACCAAGATGAGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSGTPGPRCSVQEVRAEQSPVL*TKMRPP Trigger: AGGTGGCCTCATCTTGGTCAACAAAACAGGAGACTG...CTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCTGGGGTACCTGATGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CAA 90 bp | GGACCATCAGGTACCCCAGGACCACGCTGCTCAGTCCAAGAAGTCAGAGCAGAGACCCAGTCTCCTGTTTaGTTGACCAAGATGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPSGTPGPRCSVQEVRAETQSPV*LTKMRP Trigger: TGGCCTCATCTTGGTCAACAAAACAGGAGACTGGGT...CTCTGCTCTGACTTCTTGGACTGAGCAGCGTGGTCCTGGGGTACCTGATGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | CCGTGCAAGTTTAACGGGATTTGCGATACAGCGCACGGCAGACACTaGACCTGCAGACAGGTCCTTCCCATCCATGATACTAGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCKFNGICDTAHGRH*TCRQVLPIHDTSIH Trigger: ATGGATGCTAGTATCATGGATGGGAAGGACCTGTCTGCAGGTGCAGTGTCTGCCGTGCGCTGTATCGCAAATCCCGTTAAACTTGCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 90 bp | CCTCCTCTACGGTCTTTCCTTGCTCTACATGGAAGAGGGCAAGTCTaGCCAGATTCACCTTCAGGATACTTTCCCCATGTCCTGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLRSFLALHGRGQV*PDSPSGYFPHVLWL Trigger: CAACCACAGGACATGGGGAAAGTATCCTGAAGGTGAATCTGGCCAGACTTGCCCTCTTCCATGTAGAGCAAGGAAAGACCGTAGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS-3UTR CAA 90 bp | ATTTTCCCTGGTCTTAATACAGGCAGGCATCTCTCATCGCTTCAGAACCCGACCAGGCAGAGGTCCACTTaGCCACCCAGTCTCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFPGLNTGRHLSSLQNPTRQRST*PPSLLF Trigger: AAACAGGAGACTGGGTGGCAAAGTGGACCTCTGCCT...GGTCGGGTTCTGAAGCGATGAGAGATGCCTGCCTGTATTAAGACCAGGGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS TCA 90 bp | AGCCAAGTTTCCTCTGCAGTCCAAGGCAACAGCACCCACAGTTCCTaGGTTTTTAGGGCAGTCAGCATTCTGTGCTCCCTTCTCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQVSSAVQGNSTHSS*VFRAVSILCSLLKL Trigger: AAGCTTGAGAAGGGAGCACAGAATGCTGACTGCCCTAAAAACTCAGGAACTGTGGGTGCTGTTGCCTTGGACTGCAGAGGAAACTTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | ATGAGGTGTCTTTTCCATAACAAGCCGTGCAAGTTTAACGGGATTTaGGATACAGCGCACGGCAGACACTGCACCTGCAGACAGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MRCLFHNKPCKFNGI*DTAHGRHCTCRQVL Trigger: AAGGACCTGTCTGCAGGTGCAGTGTCTGCCGTGCGCTGTATCGCAAATCCCGTTAAACTTGCACGGCTTGTTATGGAAAAGACACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 90 bp | ATCACCGTTTACATTCAGGACAGACCCATAACCTGCGTTGAACTCTaGGTCGTTTTCCAGGACAGTCACGGCTCCTTCCACAGCATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ITVYIQDRPITCVEL*VVFQDSHGSFHSIY Trigger: GTAGATGCTGTGGAAGGAGCCGTGACTGTCCTGGAAAACGACCCAGAGTTCAACGCAGGTTATGGGTCTGTCCTGAATGTAAACGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | AAGTTTAACGGGATTTGCGATACAGCGCACGGCAGACACTGCACCTaGAGACAGGTCCTTCCCATCCATGATACTAGCATCCATCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KFNGICDTAHGRHCT*RQVLPIHDTSIHLN Trigger: ATTGAGATGGATGCTAGTATCATGGATGGGAAGGACCTGTCTGCAGGTGCAGTGTCTGCCGTGCGCTGTATCGCAAATCCCGTTAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | ATGGCCAGTCAGAAAGCAATGAGGTGTCTTTTCCATAACAAGCCGTaGAAGTTTAACGGGATTTGCGATACAGCGCACGGCAGACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: MASQKAMRCLFHNKP*KFNGICDTAHGRHC Trigger: GCAGTGTCTGCCGTGCGCTGTATCGCAAATCCCGTTAAACTTGCACGGCTTGTTATGGAAAAGACACCTCATTGCTTTCTGACTGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 90 bp | CAAGTCTGGCCAGATTCACCTTCAGGATACTTTCCCCATGTCCTGTaGTTGAAACGGCTCCAAGGTTATTATCTGCGTAACCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVWPDSPSGYFPHVL*LKRLQGYYLRNLQL Trigger: GAGCTGGAGGTTACGCAGATAATAACCTTGGAGCCGTTTCAACCACAGGACATGGGGAAAGTATCCTGAAGGTGAATCTGGCCAGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS TCA 90 bp | TCTGGCCAGATTCACCTTCAGGATACTTTCCCCATGTCCTGTGGTTaGAACGGCTCCAAGGTTATTATCTGCGTAACCTCCAGCTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SGQIHLQDTFPMSCG*NGSKVIICVTSSSY Trigger: ATAGGAGCTGGAGGTTACGCAGATAATAACCTTGGAGCCGTTTCAACCACAGGACATGGGGAAAGTATCCTGAAGGTGAATCTGGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 90 bp | TTCTACAGGGACCTGTGGAATCCCCATGTCTTCTGCAAATTTCTCTaGACCATGGCCAGTCAGAAAGCAATGAGGTGTCTTTTCCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: FYRDLWNPHVFCKFL*TMASQKAMRCLFHN Trigger: GTTATGGAAAAGACACCTCATTGCTTTCTGACTGGCCATGGTGCAGAGAAATTTGCAGAAGACATGGGGATTCCACAGGTCCCTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 90 bp | CATTCTGTGCTCCCTTCTCAAGCTTCTCTTTCTCCAGGTGCTTCTTaGTTCTCTCAGTTATCAGTTTTTCTACAGGGACCTGTGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: HSVLPSQASLSPGAS*FSQLSVFLQGPVES Trigger: GGATTCCACAGGTCCCTGTAGAAAAACTGATAACTGAGAGAACCAAGAAGCACCTGGAGAAAGAGAAGCTTGAGAAGGGAGCACAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | GCTCCCTCCCGCCTTGAGGATTTTGTAGCCCTCGGTTaGCGCTCTGGCGATGCCCTCGCGCACCAGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: APSRLEDFVALG*RSGDALAHQLF Trigger: AAAGAGCTGGTGCGCGAGGGCATCGCCAGAGCGGCAACCGAGGGCTACAAAATCCTCAAGGCGGGAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 90 bp | AGGTCCCTTGTCCTGGTCTCACAGAGGTCAATGCCGGCCTGCAGCTaGCCATTCTTCACCGCTGCCCAGGGCATGGAGGCAGAGGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSLVLVSQRSMPACS*PFFTAAQGMEAEVH Trigger: GTGGACCTCTGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGACAAGGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS TCA 72 bp | CTCCTTCCACAGCATCTACCGCGCTCCCTCCCGCCTTaGGGATTTTGTAGCCCTCGGTTGCCGCTCTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LLPQHLPRSLPP*GFCSPRLPLWR Trigger: TCGCCAGAGCGGCAACCGAGGGCTACAAAATCCTCAAGGCGGGAGGGAGCGCGGTAGATGCTGTGGAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | TCCTGGTCTCACAGAGGTCAATGCCGGCCTGCAGCTTaGCATTCTTCACCGCTGCCCAGGGCATGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SWSHRGQCRPAA*HSSPLPRAWRQ Trigger: CTGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 72 bp | GTCCTGGTCTCACAGAGGTCAATGCCGGCCTGCAGCTaGCCATTCTTCACCGCTGCCCAGGGCATGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLVSQRSMPACS*PFFTAAQGMEA Trigger: TGCCTCCATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | TCCCTTGTCCTGGTCTCACAGAGGTCAATGCCGGCCTaGAGCTTGCCATTCTTCACCGCTGCCCAGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLVLVSQRSMPA*SLPFFTAAQGM Trigger: CATGCCCTGGGCAGCGGTGAAGAATGGCAAGCTGCAGGCCGGCATTGACCTCTGTGAGACCAGGACAAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | TTTAACGGGATTTGCGATACAGCGCACGGCAGACACTaGACCTGCAGACAGGTCCTTCCCATCCATGATACT | + |
|
Preference number: 6 (lower is better) Translates to: FNGICDTAHGRH*TCRQVLPIHDT Trigger: AGTATCATGGATGGGAAGGACCTGTCTGCAGGTGCAGTGTCTGCCGTGCGCTGTATCGCAAATCCCGTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 72 bp | TACATTCAGGACAGACCCATAACCTGCGTTGAACTCTaGGTCGTTTTCCAGGACAGTCACGGCTCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: YIQDRPITCVEL*VVFQDSHGSFH Trigger: GTGGAAGGAGCCGTGACTGTCCTGGAAAACGACCCAGAGTTCAACGCAGGTTATGGGTCTGTCCTGAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 90 bp | CAGGGCATGGAGGCAGAGGTCCACTTTGCCACCCAGTCTCCTGTTTaGTTGACCAAGATGAGGCCACCTAGACCTTTGAGTTTTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QGMEAEVHFATQSPV*LTKMRPPRPLSFDF Trigger: GAAGTCAAAACTCAAAGGTCTAGGTGGCCTCATCTTGGTCAACAAAACAGGAGACTGGGTGGCAAAGTGGACCTCTGCCTCCATGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 90 bp | CATGTAATCCAATGCCAACTGAGCAGCCTCCTCTACGGTCTTTCCTaGCTCTACATGGAAGAGGGCAAGTCTGGCCAGATTCACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HVIQCQLSSLLYGLS*LYMEEGKSGQIHLQ Trigger: CTGAAGGTGAATCTGGCCAGACTTGCCCTCTTCCATGTAGAGCAAGGAAAGACCGTAGAGGAGGCTGCTCAGTTGGCATTGGATTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 90 bp | GGCATGGAGGCAGAGGTCCACTTTGCCACCCAGTCTCCTGTTTTGTaGACCAAGATGAGGCCACCTAGACCTTTGAGTTTTGACTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GMEAEVHFATQSPVL*TKMRPPRPLSFDFM Trigger: CATGAAGTCAAAACTCAAAGGTCTAGGTGGCCTCATCTTGGTCAACAAAACAGGAGACTGGGTGGCAAAGTGGACCTCTGCCTCCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 72 bp | CGGTCTTTCCTTGCTCTACATGGAAGAGGGCAAGTCTaGCCAGATTCACCTTCAGGATACTTTCCCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSFLALHGRGQV*PDSPSGYFPHV Trigger: GACATGGGGAAAGTATCCTGAAGGTGAATCTGGCCAGACTTGCCCTCTTCCATGTAGAGCAAGGAAAGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | CAGAAAGCAATGAGGTGTCTTTTCCATAACAAGCCGTaGAAGTTTAACGGGATTTGCGATACAGCGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: QKAMRCLFHNKP*KFNGICDTAHG Trigger: GCCGTGCGCTGTATCGCAAATCCCGTTAAACTTGCACGGCTTGTTATGGAAAAGACACCTCATTGCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | GACCTGTGGAATCCCCATGTCTTCTGCAAATTTCTCTaGACCATGGCCAGTCAGAAAGCAATGAGGTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLWNPHVFCKFL*TMASQKAMRCL Trigger: AAGACACCTCATTGCTTTCTGACTGGCCATGGTGCAGAGAAATTTGCAGAAGACATGGGGATTCCACAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS GCA 72 bp | CTCCAAGGTTATTATCTGCGTAACCTCCAGCTCCTATaGAAGGCGAGTCTCCAACTCGGCCAACCATTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LQGYYLRNLQLL*KASLQLGQPFY Trigger: ATAAAATGGTTGGCCGAGTTGGAGACTCGCCTTGCATAGGAGCTGGAGGTTACGCAGATAATAACCTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CAA 90 bp | GCATTCTGTGCTCCCTTCTCAAGCTTCTCTTTCTCCAGGTGCTTCTaGGTTCTCTCAGTTATCAGTTTTTCTACAGGGACCTGTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: AFCAPFSSFSFSRCF*VLSVISFSTGTCGI Trigger: GATTCCACAGGTCCCTGTAGAAAAACTGATAACTGAGAGAACCAAGAAGCACCTGGAGAAAGAGAAGCTTGAGAAGGGAGCACAGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS TCA 72 bp | ATTCACCTTCAGGATACTTTCCCCATGTCCTGTGGTTaGAACGGCTCCAAGGTTATTATCTGCGTAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IHLQDTFPMSCG*NGSKVIICVTS Trigger: GGAGGTTACGCAGATAATAACCTTGGAGCCGTTTCAACCACAGGACATGGGGAAAGTATCCTGAAGGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 72 bp | CCAGATTCACCTTCAGGATACTTTCCCCATGTCCTGTaGTTGAAACGGCTCCAAGGTTATTATCTGCGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: PDSPSGYFPHVL*LKRLQGYYLRN Trigger: GTTACGCAGATAATAACCTTGGAGCCGTTTCAACCACAGGACATGGGGAAAGTATCCTGAAGGTGAATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||
| CDS CCA 72 bp | GGTTCTCTCAGTTATCAGTTTTTCTACAGGGACCTGTaGAATCCCCATGTCTTCTGCAAATTTCTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GSLSYQFFYRDL*NPHVFCKFLCT Trigger: GGTGCAGAGAAATTTGCAGAAGACATGGGGATTCCACAGGTCCCTGTAGAAAAACTGATAACTGAGAGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049948.6 |
||