Pregenerated sensors for ASPSCR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025142Ensembl transcript IDs: ENSMUST00000026135.15, ENSMUST00000103016.8, ENSMUST00000106158.9, ENSMUST00000106159.10, ENSMUST00000106160.9, ENSMUST00000131727.9, ENSMUST00000135346.8, ENSMUST00000143844.9, ENSMUST00000149389.8, ENSMUST00000151160.8, ENSMUST00000153346.8, ENSMUST00000166838.8, ENSMUST00000167678.2, ENSMUST00000168097.8, ENSMUST00000168510.2, ENSMUST00000168714.9, ENSMUST00000168947.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTCAGACTCCAGGGATACAGGGTCAGGGGCTGGCAGCAGAGGTaGGGACCCGGAAGCCCGGGACATACACCTGGCCACCAGCACATC | + |
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Preference number: 1 (lower is better) Translates to: WLRLQGYRVRGWQQR*GPGSPGHTPGHQHI Trigger: GATGTGCTGGTGGCCAGGTGTATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTATCCCTGGAGTCTGAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| 3UTR CCA 90 bp | ATCCTCAGCGATTGGCTCAGACTCCAGGGATACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCCGGAAGCCCGGGACATACACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ILSDWLRLQGYRVRG*QQRWGPGSPGHTPG Trigger: GCCAGGTGTATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTATCCCTGGAGTCTGAGCCAATCGCTGAGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| 3UTR CCA 90 bp | CGCGACTCTTTATTCCTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTaGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RDSLFLLGVGGGRVL*LVIGISRLVALTSC Trigger: GCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAGGAATAAAGAGTCGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR GCA 90 bp | GCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAGGCTGGGCTGTCCCTTGGATGGGCT | + |
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Preference number: 1 (lower is better) Translates to: ALTSCWLAASATWVL*PGFSSQAGLSLGWA Trigger: AGCCCATCCAAGGGACAGCCCAGCCTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR CCA 90 bp | GGCACCTCTGCCGGCCAGGGCTGTAGCAAGTCCTCTAGGTCAGGGTaGTACACCACAGGATCTCGGTCAACGGGCTGTGAACAGACGAAT | + |
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Preference number: 1 (lower is better) Translates to: GTSAGQGCSKSSRSG*YTTGSRSTGCEQTN Trigger: ATTCGTCTGTTCACAGCCCGTTGACCGAGATCCTGTGGTGTACCACCCTGACCTAGAGGACTTGCTACAGCCCTGGCCGGCAGAGGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168097.8 |
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| 3UTR GCA 90 bp | TTGCTCCTGACGGCTATGGACTCCTGTTTGCCGGCGGTGTCACACTaGTTTATGACAAACCTGATGGTGGCACTACCACCTGTCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LLLTAMDSCLPAVSH*FMTNLMVALPPVRP Trigger: GGGCCTGACAGGTGGTAGTGCCACCATCAGGTTTGTCATAAAGCAGTGTGACACCGCCGGCAAACAGGAGTCCATAGCCGTCAGGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| 3UTR TCA 90 bp | ATGACAAACCTGATGGTGGCACTACCACCTGTCAGGCCCAGTGACTaGAGGGTTGTGTTCTGTAAGGCAGCTCTACCAGTCACCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: MTNLMVALPPVRPSD*RVVFCKAALPVTCR Trigger: TCTGCAGGTGACTGGTAGAGCTGCCTTACAGAACACAACCCTTCAGTCACTGGGCCTGACAGGTGGTAGTGCCACCATCAGGTTTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| 3UTR-3UTR CCA 90 bp | GGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTTGGGTACTTTGCCCGGCTGGCAGCAGAGGTaGGGACCCGGAAGCCCGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSSHLLLAGSFSHLGTLPGWQQR*GPGSPG Trigger: TCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCC...GGGCAAAGTACCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCCTCTGGGGGCCCCAGTaGCCCATCCTCAGCGATTGG | + |
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Preference number: 2 (lower is better) Translates to: VAGDRHLQAGSSHLLLAGLWGPQ*PILSDW Trigger: CCAATCGCTGAGGATGGGGCACTGGGGCCCCCAGAG...GCCAGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTATCACCAGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCCCCATCCTCAGCGATTGGCTCAGACTCCAGGGATACAGGGTCAGGGGCTATTCCTGCTCGGGGTaGGTGGGGGTAGGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QCPILSDWLRLQGYRVRGYSCSG*VGVGSC Trigger: ACAGGACCCTACCCCCACCCACCCCGAGCAGGAATA...GCCCCTGACCCTGTATCCCTGGAGTCTGAGCCAATCGCTGAGGATGGGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGTACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: VLWLVIGISRLVALTSCWYRVRG*QQRWGP Trigger: GGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTA...CCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCTATTCCTGCTCGGGGTaGGTGGGGGTAGGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: IGISRLVALTSCWLAASAYSCSG*VGVGSC Trigger: ACAGGACCCTACCCCCACCCACCCCGAGCAGGAATA...GGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTTGGGTACTTTGCCCTACAGGGTCAGGGGCTaGCCACCAGCACATCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GSSHLLLAGSFSHLGTLPYRVRG*PPAHQL Trigger: CAGCTGATGTGCTGGTGGCCAGCCCCTGACCCTGTA...GGGCAAAGTACCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168947.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCCTGCTGAACTCCCCAGAGTTCAGAGGAAGCAATGTGCTACTGGATGCCCCGGCGGTGTCACACTaGTTTATGACAAACCTGATG | + |
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Preference number: 2 (lower is better) Translates to: SPLLNSPEFRGSNVLLDAPAVSH*FMTNLM Trigger: CATCAGGTTTGTCATAAAGCAGTGTGACACCGCCGG...GGCATCCAGTAGCACATTGCTTCCTCTGAACTCTGGGGAGTTCAGCAGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGCTGAACTCCCCAGAGTTCAGAGGAAGCAATGTGCTACTGGATGCCTGGCTCTACCAGTCACCTaGAGAGAAACAAAAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SPAELPRVQRKQCATGCLALPVT*RETKGH Trigger: ATGTCCTTTTGTTTCTCTGCAGGTGACTGGTAGAGC...CAGGCATCCAGTAGCACATTGCTTCCTCTGAACTCTGGGGAGTTCAGCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| 3UTR CCA 72 bp | GATTGGCTCAGACTCCAGGGATACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCCGGAAGCCCGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: DWLRLQGYRVRG*QQRWGPGSPGH Trigger: ATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTATCCCTGGAGTCTGAGCCAATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| 3UTR CCA 72 bp | CACTTGGGTACTTTGCCCAGGCTTCTCTTCACAGGCTaGGCTGTCCCTTGGATGGGCTCTGGGGGCCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: HLGTLPRLLFTG*AVPWMGSGGPS Trigger: ACTGGGGCCCCCAGAGCCCATCCAAGGGACAGCCCAGCCTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000166838.8 ENSMUST00000167678.2 ENSMUST00000168947.2 |
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| 3UTR CCA 72 bp | GGGGCTTCTTCCAGACGCTTCCGCTCACTCTTGAGCTaGGCCAAGCGTCTCCTCACATCATCCACAGTCACC | + |
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Preference number: 3 (lower is better) Translates to: GASSRRFRSLLS*AKRLLTSSTVT Trigger: GGTGACTGTGGATGATGTGAGGAGACGCTTGGCCCAGCTCAAGAGTGAGCGGAAGCGTCTGGAAGAAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168097.8 |
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| 3UTR GCA 72 bp | TCTTGCTGGCTGGCAGCTTCAGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAGGCTGGGCTGTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: SCWLAASATWVL*PGFSSQAGLSL Trigger: AAGGGACAGCCCAGCCTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGCTGAAGCTGCCAGCCAGCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000168947.2 |
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| 3UTR TCA 72 bp | CTGATGGTGGCACTACCACCTGTCAGGCCCAGTGACTaGAGGGTTGTGTTCTGTAAGGCAGCTCTACCAGTC | + |
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Preference number: 3 (lower is better) Translates to: LMVALPPVRPSD*RVVFCKAALPV Trigger: GACTGGTAGAGCTGCCTTACAGAACACAACCCTTCAGTCACTGGGCCTGACAGGTGGTAGTGCCACCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGGCTGGCAGCAGAGGTaGGGACCCGGAAGCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLGWQQR*GPGSPG Trigger: TCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGTGGCGCCGCCCGTTTaGGGCCAGCACCGACACCGC | + |
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Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAVAPPV*GQHRHR Trigger: GCGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCAC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGCAGCAGAGGTGGGGACCCGGAAGCCCGGGACATACACCTGGCCACCGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GAGSRGGDPEARDIHLATGSGSC*GSSPGF Trigger: AAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACC...GGTGGCCAGGTGTATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGGCTGGCAGCAGAGGTaGGGACCCGGAAGCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVGWQQR*GPGSPG Trigger: TCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAGCC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTCTGGGGGCCCCAGTaGCCCATCCTCAGCGATTGG | + |
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Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRLWGPQ*PILSDW Trigger: CCAATCGCTGAGGATGGGGCACTGGGGCCCCCAGAG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCTCTGGGGGCCCCAGTaGCCCATCCTCAGCGATTGG | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLLWGPQ*PILSDW Trigger: CCAATCGCTGAGGATGGGGCACTGGGGCCCCCAGAG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGTCACCTTCACCGTGTaGCGCCGCCCGTTTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVVTFTV*RRPFGA Trigger: GGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGAC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLYRVRG*QQRWGP Trigger: GGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR TCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGCTTCCGCTCACTCTTaGGCTGGGCCAAGCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLASAHS*AGPSVS Trigger: GGAGACGCTTGGCCCAGCTCAAGAGTGAGCGGAAGC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR TCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGCTTCCGCTCACTCTTaGGCTGGGCCAAGCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRASAHS*AGPSVS Trigger: GGAGACGCTTGGCCCAGCTCAAGAGTGAGCGGAAGC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACCTGCAGCAGCACGGTaGTCGGCGTCACCTTCACCG | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVPAAAR*SASPSP Trigger: CGGTGAAGGTGACGCCGAGCACCGTGCTGCTGCAGG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACTCTGGGGGCCCCAGTaGCCCATCCTCAGCGATTGG | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVLWGPQ*PILSDW Trigger: CCAATCGCTGAGGATGGGGCACTGGGGCCCCCAGAG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGAGCATCCGTTGGTTTaGGGCCACCCTCAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISREHPLV*GHPQGR Trigger: CCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGAGCATCCGTTGGTTTaGGGCCACCCTCAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLEHPLV*GHPQGR Trigger: CCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCCCCCACTGTCTCACTaGGGCGGAAGAAGCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRPPLSH*GGRSPA Trigger: TGCAGGGCTTCTTCCGCCCCAGTGAGACAGTGGGGG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106159.10 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVYRVRG*QQRWGP Trigger: GGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTCCGCTCACTCTTaGGCTGGGCCAAGCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVASAHS*AGPSVS Trigger: GGAGACGCTTGGCCCAGCTCAAGAGTGAGCGGAAGC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTCTTCTCACCCAGCTaGTGCAGACGCTCCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLVFSPS*CRRSLV Trigger: GACCAGGGAGCGTCTGCAGCAGCTGGGTGAGAAGAC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGTCTTCTCACCCAGCTaGTGCAGACGCTCCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRVFSPS*CRRSLV Trigger: GACCAGGGAGCGTCTGCAGCAGCTGGGTGAGAAGAC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGAGCATCCGTTGGTTTaGGGCCACCCTCAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVEHPLV*GHPQGR Trigger: CCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLGSGSC*GSSPGF Trigger: AAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRGSGSC*GSSPGF Trigger: AAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCCCGGGACATACACCTaGCCACCAGCACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRPGTYT*PPAHQL Trigger: CAGCTGATGTGCTGGTGGCCAGGTGTATGTCCCGGG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTACAGGGTCAGGGGCTaGCAGCAGAGGTGGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAYRVRG*QQRWGP Trigger: GGGTCCCCACCTCTGCTGCCAGCCCCTGACCCTGTA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTCATCTGAGCCTCCCTaGAAGCCTTGGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSSEPP*KPWSPG Trigger: CCCTGGTGACCAAGGCTTTCAGGGAGGCTCAGATGA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTTTTGGGTGGAGCGATaGCTGTCTCACTGGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRFWVER*LSHWGG Trigger: TCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGTCTTCTCACCCAGCTaGTGCAGACGCTCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVVFSPS*CRRSLV Trigger: GACCAGGGAGCGTCTGCAGCAGCTGGGTGAGAAGAC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAACGAAGGGGGCCGATaGAGGCTCACTGGTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLNEGGR*RLTGAL Trigger: CAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCGTT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAACGAAGGGGGCCGATaGAGGCTCACTGGTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRNEGGR*RLTGAL Trigger: CAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCGTT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAGCCCTCCCAGGTACTaGAGGCACTCACCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSPPRY*RHSPVS Trigger: TGAGACAGGTGAGTGCCTGCAGTACCTGGGAGGGCT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLKRPAT*SRHPAG Trigger: TCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRKRPAT*SRHPAG Trigger: TCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGAGCATCCGTTGGTTTaGGGCCACCCTCAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAEHPLV*GHPQGR Trigger: CCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCGCTCACTCTTGAGCTaGGCCAAGCGTCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLRSLLS*AKRLLT Trigger: TGTGAGGAGACGCTTGGCCCAGCTCAAGAGTGAGCG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCGCTCACTCTTGAGCTaGGCCAAGCGTCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRRSLLS*AKRLLT Trigger: TGTGAGGAGACGCTTGGCCCAGCTCAAGAGTGAGCG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCCCCCACTGTCTCACTaGGGCGGAAGAAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAPPLSH*GGRSPA Trigger: TGCAGGGCTTCTTCCGCCCCAGTGAGACAGTGGGGG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106159.10 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACCCGGGACATACACCTaGCCACCAGCACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVPGTYT*PPAHQL Trigger: CAGCTGATGTGCTGGTGGCCAGGTGTATGTCCCGGG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTCACCTCTTGCTGGCTaGCAGCTTCAGCCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSPLAG*QLQPLG Trigger: CCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTCACCTCTTGCTGGCTaGCAGCTTCAGCCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSPLAG*QLQPLG Trigger: CCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGTTTGCCTGTCTCACTaGGGCGGAAGAAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRVCLSH*GGRSPA Trigger: TGCAGGGCTTCTTCCGCCCCAGTGAGACAGGCAAAC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168947.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACGTATTCACTGGGGTTaGAGTCTTGCCGCCGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVRIHWG*SLAAGM Trigger: CATGCCGGCGGCAAGACTTCAACCCCAGTGAATACG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTTAGGTCTCCCCTGCTaGACTCCCCAGAGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRLGLPC*TPQSSE Trigger: CTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCTAA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTGCTTCCGCTCACTCTTaGGCTGGGCCAAGCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GISRLVALTSCWLAASATASAHS*AGPSVS Trigger: GGAGACGCTTGGCCCAGCTCAAGAGTGAGCGGAAGC...AGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATCATCTGAGCCTCCCTaGAAGCCTTGGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSSEPP*KPWSPG Trigger: CCCTGGTGACCAAGGCTTTCAGGGAGGCTCAGATGA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGGGAAGAGGTTTGCCTaGAAGAGAGTCAGCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLGKRFA*KRVSVW Trigger: CCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATTTTGGGTGGAGCGATaGCTGTCTCACTGGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVFWVER*LSHWGG Trigger: TCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAAACGAAGGGGGCCGATaGAGGCTCACTGGTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVNEGGR*RLTGAL Trigger: CAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCGTT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGAGCCGTCATCCAGCTaGAACGCGATGCGAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISREPSSS*NAMRTM Trigger: CATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAGSGSC*GSSPGF Trigger: AAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTCGGGGTTCCCCAGGTaGCTCCTAACAAAGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSGFPR*LLTKSR Trigger: TCGAGACTTTGTTAGGAGCCACCTGGGGAACCCCGA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106159.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTCGGGGTTCCCCAGGTaGCTCCTAACAAAGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSGFPR*LLTKSR Trigger: TCGAGACTTTGTTAGGAGCCACCTGGGGAACCCCGA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106159.10 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCCCGGGACATACACCTaGCCACCAGCACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAPGTYT*PPAHQL Trigger: CAGCTGATGTGCTGGTGGCCAGGTGTATGTCCCGGG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATCACCTCTTGCTGGCTaGCAGCTTCAGCCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSPLAG*QLQPLG Trigger: CCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATTAGGTCTCCCCTGCTaGACTCCCCAGAGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVLGLPC*TPQSSE Trigger: CTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCTAA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTCATCTGAGCCTCCCTaGAAGCCTTGGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVASSEPP*KPWSPG Trigger: CCCTGGTGACCAAGGCTTTCAGGGAGGCTCAGATGA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGGGAAGAGGTTTGCCTaGAAGAGAGTCAGCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVGKRFA*KRVSVW Trigger: CCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGTGTCTTCTAGTACCTaGAGCAGCACGGTGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAVSSST*SSTVLG Trigger: GCCGAGCACCGTGCTGCTGCAGGTACTAGAAGACAC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGACGCTCCCTGGTCTGTaGAAAATGGCTGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLTLPGL*KMAEKL Trigger: GAGCTTCTCAGCCATTTTGCACAGACCAGGGAGCGT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTCAGAGGAAGCAATGTaGTACTGGATGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSEEAM*YWMPGR Trigger: CCGACCAGGCATCCAGTAGCACATTGCTTCCTCTGA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTCAGAGGAAGCAATGTaGTACTGGATGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSEEAM*YWMPGR Trigger: CCGACCAGGCATCCAGTAGCACATTGCTTCCTCTGA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTCTTCAGCTCCAAAGTaGACAAGCGCAGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSSAPK*TSAAGK Trigger: CTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGAGGTGGGGACCCGGAAGCCCGGGACATACACCTGGCCACCAGCACATTCTTCAGCTCCAAAGTaGACAAGCGCAGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAEVGTRKPGTYTWPPAHSSAPK*TSAAGK Trigger: CTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGA...ATGTGCTGGTGGCCAGGTGTATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLATWVL*PGFSSQ Trigger: CTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRATWVL*PGFSSQ Trigger: CTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGAGCCGTCATCCAGCTaGAACGCGATGCGAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVEPSSS*NAMRTM Trigger: CATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAKRPAT*SRHPAG Trigger: TCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLLLTRL*LLGLRR Trigger: CCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCGCTCACTCTTGAGCTaGGCCAAGCGTCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVARSLLS*AKRLLT Trigger: TGTGAGGAGACGCTTGGCCCAGCTCAAGAGTGAGCG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTCACCTCTTGCTGGCTaGCAGCTTCAGCCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVASPLAG*QLQPLG Trigger: CCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTTAGGTCTCCCCTGCTaGACTCCCCAGAGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVALGLPC*TPQSSE Trigger: CTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCTAA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAGTTTCTCCTTCATCTaGGCCTCCCTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSFSFI*ASLKAL Trigger: CAAGGCTTTCAGGGAGGCTCAGATGAAGGAGAAACT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAGTTTCTCCTTCATCTaGGCCTCCCTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSFSFI*ASLKAL Trigger: CAAGGCTTTCAGGGAGGCTCAGATGAAGGAGAAACT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGGGAAGAGGTTTGCCTaGAAGAGAGTCAGCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAGKRFA*KRVSVW Trigger: CCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTGGGGTTGAAGTCTTaGCGCCGGCATGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVALGLKS*RRHVSS Trigger: AGAAGACACATGCCGGCGGCAAGACTTCAACCCCAG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCCGGCGGTGTCACACTaGTTTATGACAAACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLPAVSH*FMTNLM Trigger: CATCAGGTTTGTCATAAAGCAGTGTGACACCGCCGG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATCAGAGGAAGCAATGTaGTACTGGATGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSEEAM*YWMPGR Trigger: CCGACCAGGCATCCAGTAGCACATTGCTTCCTCTGA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAGCAGGGAAGAGGTTTaGCTGAAAGAGAGTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRSREEV*LKESQR Trigger: ACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAGCAGGGAAGAGGTTTaGCTGAAAGAGAGTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSREEV*LKESQR Trigger: ACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATCTTCAGCTCCAAAGTaGACAAGCGCAGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSSAPK*TSAAGK Trigger: CTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVATWVL*PGFSSQ Trigger: CTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTTGGCAAATCTCCACTaGAGAGAGAGGTCTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRLANLH*RERSST Trigger: GGTGCTAGACCTCTCTCTCCAGTGGAGATTTGCCAA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTCTGTGCAAAATaGCTGAGAAGCTCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRLVCAK*LRSSQR Trigger: TCTCTGGGAGCTTCTCAGCCATTTTGCACAGACCAG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCTGGTCTGTGCAAAATaGCTGAGAAGCTCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLLVCAK*LRSSQR Trigger: TCTCTGGGAGCTTCTCAGCCATTTTGCACAGACCAG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGGCCAGAGAAAGACTTaGATGAATTGGCCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRGQRKT*MNWPKV Trigger: CACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGGCCAGAGAAAGACTTaGATGAATTGGCCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLGQRKT*MNWPKV Trigger: CACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVLLTRL*LLGLRR Trigger: CCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CCA 90 bp | GGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTCGCTCACTCTTGAGCTaGGCCAAGCGTCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GISRLVALTSCWLAASATRSLLS*AKRLLT Trigger: TGTGAGGAGACGCTTGGCCCAGCTCAAGAGTGAGCG...AGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGTGCTTTGCTTTGTTTaGGCATCCGTTGGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVVLCFV*ASVGLG Trigger: CCCCAAACCAACGGATGCTCAAACAAAGCAAAGCAC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAAGTTTCTCCTTCATCTaGGCCTCCCTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSFSFI*ASLKAL Trigger: CAAGGCTTTCAGGGAGGCTCAGATGAAGGAGAAACT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTACGCTCCCTGGTCTGTaGAAAATGGCTGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVATLPGL*KMAEKL Trigger: GAGCTTCTCAGCCATTTTGCACAGACCAGGGAGCGT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACCGGCGGTGTCACACTaGTTTATGACAAACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVPAVSH*FMTNLM Trigger: CATCAGGTTTGTCATAAAGCAGTGTGACACCGCCGG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTCAGAGGAAGCAATGTaGTACTGGATGCCTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVASEEAM*YWMPGR Trigger: CCGACCAGGCATCCAGTAGCACATTGCTTCCTCTGA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAAGCAGGGAAGAGGTTTaGCTGAAAGAGAGTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSREEV*LKESQR Trigger: ACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTCTTCAGCTCCAAAGTaGACAAGCGCAGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVASSAPK*TSAAGK Trigger: CTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGCCACTTGGGTACTTTaGCCAGGCTTCTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAATWVL*PGFSSQ Trigger: CTGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCGTCAGGCACCTCTGCCGGCCAGGGCTGTAGCAAGTCCTCTAGGTCAAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSSGTSAGQGCSKSSRSKRPAT*SRHPAG Trigger: TCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTT...TGACCTAGAGGACTTGCTACAGCCCTGGCCGGCAGAGGTGCCTGACGAGTTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168097.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACTGGTCTGTGCAAAATaGCTGAGAAGCTCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVLVCAK*LRSSQR Trigger: TCTCTGGGAGCTTCTCAGCCATTTTGCACAGACCAG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVALLTRL*LLGLRR Trigger: CCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | GGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGACTCACCTGTCTCACTaGGGCGGAAGAAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVAGDRHLQAGSSHLLLTHLSH*GGRSPA Trigger: TGCAGGGCTTCTTCCGCCCCAGTGAGACAGGTGAGT...CAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR TCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTAGTTTCTCCTTCATCTaGGCCTCCCTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVASFSFI*ASLKAL Trigger: CAAGGCTTTCAGGGAGGCTCAGATGAAGGAGAAACT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAGTGCCCCATCCTCAGCGATTGGCTCAGACTCCAGGGATACAGGGTCAAGTTTCTCCTTCATCTaGGCCTCCCTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPSAPSSAIGSDSRDTGSSFSFI*ASLKAL Trigger: CAAGGCTTTCAGGGAGGCTCAGATGAAGGAGAAACT...TGACCCTGTATCCCTGGAGTCTGAGCCAATCGCTGAGGATGGGGCACTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR GCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCCGGCGGTGTCACACTaGTTTATGACAAACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAPAVSH*FMTNLM Trigger: CATCAGGTTTGTCATAAAGCAGTGTGACACCGCCGG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR GCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGATGCAGGCTCACTGGTaGTTTGCTTTGTTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLMQAHW*FALFEH Trigger: ATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCAT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR GCA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGATGCAGGCTCACTGGTaGTTTGCTTTGTTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGGGRVLWLVIGISRMQAHW*FALFEH Trigger: ATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCAT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTGGCCAGAGAAAGACTTaGATGAATTGGCCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAGQRKT*MNWPKV Trigger: CACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCC...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCAGATAGAGACCTGTTaGTTCTTCAGCTCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGGGRVLWLVIGISRLQIETC*FFSSKV Trigger: CACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR GCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAATGCAGGCTCACTGGTaGTTTGCTTTGTTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVMQAHW*FALFEH Trigger: ATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCAT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTAGCAGGGAAGAGGTTTaGCTACAAGGAGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVAGDRHLQAGSSHLLLASREEV*LQGGQE Trigger: TTCCTGCCCTCCTTGTAGGCAAACCTCTTCCCTGCT...AGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | ATAGGCATCTCCAGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCCTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGISRLVALTSCWLAASALLTRL*LLGLRR Trigger: CCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAG...GGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACCAGCCTGGAGATGCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACAGATAGAGACCTGTTaGTTCTTCAGCTCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRVLWLVIGISRLVQIETC*FFSSKV Trigger: CACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTCCCCTGCTGAACTCCCCAGAGTTCAGAGGAAGCAATGTGCTACTGGATAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLNSPEFRGSNVLLDKRPAT*SRHPAG Trigger: TCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTT...ATCCAGTAGCACATTGCTTCCTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| CDS-3UTR CCA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTCAGATAGAGACCTGTTaGTTCTTCAGCTCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGGRVLWLVIGISRLVAQIETC*FFSSKV Trigger: CACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTG...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| 3UTR CAA 72 bp | TGGCACTACCACCTGTCAGGCCCAGTGACTGAAGGGTaGTGTTCTGTAAGGCAGCTCTACCAGTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WHYHLSGPVTEG*CSVRQLYQSPA Trigger: TGCAGGTGACTGGTAGAGCTGCCTTACAGAACACAACCCTTCAGTCACTGGGCCTGACAGGTGGTAGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| CDS-3UTR CCA 90 bp | GCTGTAGCAAGTCCTCTAGGTCAGGGTGGTACACCACAGGATCTCGGTCAACGGCTGGTCTGTGCAAAATaGCTGAGAAGCTCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVASPLGQGGTPQDLGQRLVCAK*LRSSQR Trigger: TCTCTGGGAGCTTCTCAGCCATTTTGCACAGACCAG...CCGTTGACCGAGATCCTGTGGTGTACCACCCTGACCTAGAGGACTTGCTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168097.8 |
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| CDS-3UTR GCA 90 bp | CTGAACTCCCCAGAGTTCAGAGGAAGCAATGTGCTACTGGATGCCTGGTCGGCTCAACTCCCTGGTCTGTaGAAAATGGCTGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSPEFRGSNVLLDAWSAQLPGL*KMAEKL Trigger: GAGCTTCTCAGCCATTTTGCACAGACCAGGGAGTTG...AGCCGACCAGGCATCCAGTAGCACATTGCTTCCTCTGAACTCTGGGGAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| CDS-3UTR CCA 90 bp | AGGTCTCCCCTGCTGAACTCCCCAGAGTTCAGAGGAAGCAATGTGCTACTGGATCTGGTCTGTGCAAAATaGCTGAGAAGCTCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLNSPEFRGSNVLLDLVCAK*LRSSQR Trigger: TCTCTGGGAGCTTCTCAGCCATTTTGCACAGACCAG...ATCCAGTAGCACATTGCTTCCTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143844.9 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTAGCTCTCACCTCTTGCTGGCTGGCAGCTTCAGCCACTTGGGTACTTCAGATAGAGACCTGTTaGTTCTTCAGCTCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVALTSCWLAASATWVLQIETC*FFSSKV Trigger: CACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTG...AAGTACCCAAGTGGCTGAAGCTGCCAGCCAGCAAGAGGTGAGAGCTACCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS CCA 90 bp | TCTAGTACCTGCAGCAGCACGGTGCTCGGCGTCACCTTCACCGTGTaGCGCCGCCCGTTTGGGGCCAGCACCGACACCGCGGAGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSTCSSTVLGVTFTV*RRPFGASTDTAEPP Trigger: CGGGGGCTCCGCGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGACGCCGAGCACCGTGCTGCTGCAGGTACTAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTGTGGCGCCGCCCGTTaGGGGCCAGCACCGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVACGAAR*GPAPTP Trigger: CGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS CCA 90 bp | GGCACCTCTGCCGGCCAGGGCTGTAGCAAGTCCTCTAGGTCAGGGTaGTACACCACAGGATCTCGGTCAACGGGCGGTTCAGGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSAGQGCSKSSRSG*YTTGSRSTGGSGSC Trigger: GCAGGAGCCTGAACCGCCCGTTGACCGAGATCCTGTGGTGTACCACCCTGACCTAGAGGACTTGCTACAGCCCTGGCCGGCAGAGGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 ENSMUST00000167678.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLPGFGF*GLEGPP Trigger: TGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRPGFGF*GLEGPP Trigger: TGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS GCA 90 bp | AGCAGGTTCCGGTACCCAACAGGGCACAGTAGCCCTCCCAGGTACTaGAGGCACTCACCTGTCTCACTGGGGCGGAAGAAGCCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRFRYPTGHSSPPRY*RHSPVSLGRKKPCR Trigger: CCTGCAGGGCTTCTTCCGCCCCAGTGAGACAGGTGAGTGCCTGCAGTACCTGGGAGGGCTACTGTGCCCTGTTGGGTACCGGAACCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000167678.2 |
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| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTACCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVPGFGF*GLEGPP Trigger: TGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGG...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS GCA 90 bp | GGGTGGTACACCACAGGATCTCGGTCAACGGGCGGTTCAGGCTCCTaGTGGGGCTCCTCACCAGGCTTTGGCTTCTTGGGCTTAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWYTTGSRSTGGSGS*WGSSPGFGFLGLEG Trigger: CCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCGCCCGTTGACCGAGATCCTGTGGTGTACCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS CCA 90 bp | GTCAACGGGCGGTTCAGGCTCCTGCTGGGGCTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VNGRFRLLLGLLTRL*LLGLRRAPRARERL Trigger: AAGTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCGCCCGTTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS CCA 90 bp | TGGTACACCACAGGATCTCGGTCAACGGGCGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTTGGCTTCTTGGGCTTAGAAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WYTTGSRSTGGSGSC*GSSPGFGFLGLEGP Trigger: GGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCGCCCGTTGACCGAGATCCTGTGGTGTACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTCGTATTCACTGGGGTaGAAGTCTTGCCGCCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSYSLG*KSCRRH Trigger: ATGCCGGCGGCAAGACTTCAACCCCAGTGAATACGA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CAA 90 bp | GACCCGGAAGCCCGGGACATACACCTGGCCACCAGCACATCAGCTGTAGATGGGCCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DPEARDIHLATSTSAVDGPGFGF*GLEGPP Trigger: TGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGG...CCCATCTACAGCTGATGTGCTGGTGGCCAGGTGTATGTCCCGGGCTTCCGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166838.8 |
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| CDS TCA 90 bp | GGAACGAAGGGGGCCGATGCAGGCTCACTGGTGCTTTGCTTTGTTTaGGCATCCGTTGGTTTGGGGCCACCCTCAAGGCCGGTCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTKGADAGSLVLCFV*ASVGLGPPSRPVPE Trigger: CTCAGGGACCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000151160.8 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTACTGGGGTTGAAGTCTaGCCGCCGGCATGTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVATGVEV*PPACVF Trigger: GAAGACACATGCCGGCGGCAAGACTTCAACCCCAGT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGGCACCATCTCCAGCTaGGCATTGTTAGGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVGTISS*ALLGRL Trigger: CAACCTGCCTAACAATGCCAAGCTGGAGATGGTGCC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGTTGTTTGAGCATCCGTaGGTTTGGGGCCACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLLFEHP*VWGHPQ Trigger: TTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAA...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGTTGTTTGAGCATCCGTaGGTTTGGGGCCACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRLFEHP*VWGHPQ Trigger: TTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAA...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAGCCACTTGGGTACTTaGCCCAGGCTTCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLSHLGT*PRLLFT Trigger: TGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGCT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS CCA 90 bp | GGGCCACCCTCAAGGCCGGTCCCTGAGGTGTTTGCATCACCCTCATaGTTTAGGTCTCCCCTGCTGAACTCCCCAGAGTTCAGAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPSRPVPEVFASPS*FRSPLLNSPEFRGS Trigger: GCTTCCTCTGAACTCTGGGGAGTTCAGCAGGGGAGACCTAAACCATGAGGGTGATGCAAACACCTCAGGGACCGGCCTTGAGGGTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000168510.2 |
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| CDS CCA 90 bp | CTGGCAGCAGAGGTGGGGACCCGGAAGCCCGGGACATACACCTGTTaGTTCTTCAGCTCCAAAGTGCACAAGCGCAGCAGGGAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LAAEVGTRKPGTYTC*FFSSKVHKRSREEV Trigger: AACCTCTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGAACCAACAGGTGTATGTCCCGGGCTTCCGGGTCCCCACCTCTGCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167678.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTATTGTTTGAGCATCCGTaGGTTTGGGGCCACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVLFEHP*VWGHPQ Trigger: TTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAA...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGGGTGCTTTGCTTTGTTaGAGCATCCGTTGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRGALLC*SIRWFG Trigger: CCCAAACCAACGGATGCTCAAACAAAGCAAAGCACC...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGGTGCTTTGCTTTGTTaGAGCATCCGTTGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLGALLC*SIRWFG Trigger: CCCAAACCAACGGATGCTCAAACAAAGCAAAGCACC...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAGGCTCACTGGTGCTTaGCTTTGTTTGAGCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLRLTGA*LCLSIR Trigger: ACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAGGCTCACTGGTGCTTaGCTTTGTTTGAGCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRRLTGA*LCLSIR Trigger: ACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAAGCCACTTGGGTACTTaGCCCAGGCTTCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVSHLGT*PRLLFT Trigger: TGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGCT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS GCA 90 bp | CCCGGAAGCCCGGGACATACACCTGTTGGTTCTTCAGCTCCAAAGTaGACAAGCGCAGCAGGGAAGAGGTTTGCCTACAAGGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSPGHTPVGSSAPK*TSAAGKRFAYKEGR Trigger: CCTGCCCTCCTTGTAGGCAAACCTCTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGAACCAACAGGTGTATGTCCCGGGCTTCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167678.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGATCTCCAGCTTGGCATaGTTAGGCAGGTTGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLISSLA*LGRLAN Trigger: ATTTGCCAACCTGCCTAACAATGCCAAGCTGGAGAT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTTTGTTTGAGCATCCGTaGGTTTGGGGCCACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVALFEHP*VWGHPQ Trigger: TTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAA...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGGTGCTTTGCTTTGTTaGAGCATCCGTTGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVGALLC*SIRWFG Trigger: CCCAAACCAACGGATGCTCAAACAAAGCAAAGCACC...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAAGGCTCACTGGTGCTTaGCTTTGTTTGAGCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGGGRVLWLVIGISRLVRLTGA*LCLSIR Trigger: ACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCT...TACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGCCAGATAGAGACCTGTaGGTTCTTCAGCTCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLPDRDL*VLQLQS Trigger: ACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTGG...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCCAGATAGAGACCTGTaGGTTCTTCAGCTCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRPDRDL*VLQLQS Trigger: ACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTGG...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTAGCCACTTGGGTACTTaGCCCAGGCTTCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVASHLGT*PRLLFT Trigger: TGTGAAGAGAAGCCTGGGCAAAGTACCCAAGTGGCT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS TCA 90 bp | AGAGAGTCAGCGTGTGGTCATCCAGGACCATTTTGGGTGGAGCGATaGCTGTCTCACTGGGGCGGAAGAAGCCCTGCAGGATGTAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RESACGHPGPFWVER*LSHWGGRSPAGCSG Trigger: ACCGCTACATCCTGCAGGGCTTCTTCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAATGGTCCTGGATGACCACACGCTGACTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
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| CDS TCA 90 bp | CTGGTGATAGGCATCTCCAGGCTGGTAGTGGTGCTTTGCTTTGTTTaGGCATCCGTTGGTTTGGGGCCACCCTCAAGGCCGGTCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVIGISRLVVVLCFV*ASVGLGPPSRPVPE Trigger: CTCAGGGACCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCACTACCAGCCTGGAGATGCCTATCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168510.2 |
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| CDS GCA 90 bp | TGGCTGAGAAGCTCCCAGAGAGTCTGTCGGGAACAGAAAGCGTCCTaGAACCTGGAGCCGTCATCCAGCTGGAACGCGATGCGAACTATG | + |
|
Preference number: 5 (lower is better) Translates to: WLRSSQRVCREQKAS*NLEPSSSWNAMRTM Trigger: CATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTTTCTGTTCCCGACAGACTCTCTGGGAGCTTCTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTAGGCTCACTGGTGCTTaGCTTTGTTTGAGCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVARLTGA*LCLSIR Trigger: ACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS CCA 90 bp | GAAGCTCCCAGAGAGTCTGTCGGGAACAGAAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGAACGCGATGCGAACTATGTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAPRESVGNRKRPAT*SRHPAGTRCELCSQ Trigger: CTGAGAACATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTTTCTGTTCCCGACAGACTCTCTGGGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
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| CDS CCA 90 bp | TGCCTGAAAGAGAGTCAGCGTGTGGTCATCCAGGACCATTTTGGGTaGAGCGATGACTGTCTCACTGGGGCGGAAGAAGCCCTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLKESQRVVIQDHFG*SDDCLTGAEEALQD Trigger: ATCCTGCAGGGCTTCTTCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAATGGTCCTGGATGACCACACGCTGACTCTCTTTCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGAAAGACTTGGATGAATaGGCCGAAGGTGATGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGVGGGRVLWLVIGISRLKDLDE*AEGDVR Trigger: TCTAACATCACCTTCGGCCAATTCATCCAAGTCTTT...CAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS-3UTR CAA 90 bp | CTGCTCGGGGTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGAAAGACTTGGATGAATaGGCCGAAGGTGATGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLGVGGGRVLWLVIGISRKDLDE*AEGDVR Trigger: TCTAACATCACCTTCGGCCAATTCATCCAAGTCTTT...CCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCACCCCGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS TCA 90 bp | GGTCTAGCACCGTCCTCTGAAACTTCAGGTCGTATTCACTGGGGTTaGAGTCTTGCCGCCGGCATGTGTCTTCTAGTACCTGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLAPSSETSGRIHWG*SLAAGMCLLVPAAA Trigger: TGCTGCTGCAGGTACTAGAAGACACATGCCGGCGGCAAGACTTCAACCCCAGTGAATACGACCTGAAGTTTCAGAGGACGGTGCTAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGGGGTAGGGTCCTGTGGCTGGTGATAGGCATCTCCAGGCTGGTAGCTAAAGACTTGGATGAATaGGCCGAAGGTGATGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRVLWLVIGISRLVAKDLDE*AEGDVR Trigger: TCTAACATCACCTTCGGCCAATTCATCCAAGTCTTT...AGCTACCAGCCTGGAGATGCCTATCACCAGCCACAGGACCCTACCCCCACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS TCA 90 bp | TCTTCAGCTCCAAAGTGCACAAGCGCAGCAGGGAAGAGGTTTGCCTaGAAGAGAGTCAGCGTGTGGTCATCCAGGACCATTTTGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSAPKCTSAAGKRFA*KRVSVWSSRTILGG Trigger: TCCACCCAAAATGGTCCTGGATGACCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS GCA 90 bp | TGGTTCTTCAGCTCCAAAGTGCACAAGCGCAGCAGGGAAGAGGTTTaGCTGAAAGAGAGTCAGCGTGTGGTCATCCAGGACCATTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WFFSSKVHKRSREEV*LKESQRVVIQDHFG Trigger: CCCAAAATGGTCCTGGATGACCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCTGCGCTTGTGCACTTTGGAGCTGAAGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS TCA 90 bp | ATGACAAACCTGATGGTGGCACTACCACCTGTCAGGCCCAGTGACTaGAGGGTTGTGTTCTGTAAGGCAGCTCTACCAGTCACCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: MTNLMVALPPVRPSD*RVVFCKAALPVTSF Trigger: GAATGAGGTGACTGGTAGAGCTGCCTTACAGAACACAACCCTTCAGTCACTGGGCCTGACAGGTGGTAGTGCCACCATCAGGTTTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000168510.2 |
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| CDS TCA 90 bp | GGTCTAGCACCGTCCTCTGAAACTTCAGGTCGTATTCACTGGGGTTaGAGTCTTGCCGCCGGCATGTGTCTTCTAGTACTGAACTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLAPSSETSGRIHWG*SLAAGMCLLVLNFV Trigger: CACAAAGTTCAGTACTAGAAGACACATGCCGGCGGCAAGACTTCAACCCCAGTGAATACGACCTGAAGTTTCAGAGGACGGTGCTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149389.8 |
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| CDS CCA 72 bp | GCTCGGCGTCACCTTCACCGTGTGGCGCCGCCCGTTTaGGGCCAGCACCGACACCGCGGAGCCCCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRHLHRVAPPV*GQHRHRGAPAA Trigger: GGCGGCGGGGGCTCCGCGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGACGCCGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS CAA 72 bp | TGCTCGGCGTCACCTTCACCGTGTGGCGCCGCCCGTTaGGGGCCAGCACCGACACCGCGGAGCCCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSASPSPCGAAR*GPAPTPRSPRR Trigger: GCGGCGGGGGCTCCGCGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGACGCCGAGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS CCA 72 bp | TGCAGCAGCACGGTGCTCGGCGTCACCTTCACCGTGTaGCGCCGCCCGTTTGGGGCCAGCACCGACACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSSTVLGVTFTV*RRPFGASTDTA Trigger: CGCGGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGACGCCGAGCACCGTGCTGCTGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS GCA 72 bp | GCCGGCATGTGTCTTCTAGTACCTGCAGCAGCACGGTaGTCGGCGTCACCTTCACCGTGTGGCGCCGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AGMCLLVPAAAR*SASPSPCGAAR Trigger: ACGGGCGGCGCCACACGGTGAAGGTGACGCCGAGCACCGTGCTGCTGCAGGTACTAGAAGACACATGCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS CCA 72 bp | CGGTTCAGGCTCCTGCTGGGGCTCCTCACCAGGCTTTaGCTTCTTGGGCTTAGAAGGGCCCCCAGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RFRLLLGLLTRL*LLGLRRAPRAR Trigger: TCTGGCCCTGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS GCA 72 bp | CCTGCAACCTGGAGCCGTCATCCAGCTGGAACGCGATaGGAACTATGTTCTCAGGCCCCTCGCGGCTACGGG | + |
|
Preference number: 6 (lower is better) Translates to: PATWSRHPAGTR*ELCSQAPRGYG Trigger: CCCGTAGCCGCGAGGGGCCTGAGAACATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
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| CDS CAA 72 bp | GGCTCCTGCTGGGGCTCCTCACCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GSCWGSSPGFGF*GLEGPPGPEKD Trigger: GTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS GCA 72 bp | CGGTACCCAACAGGGCACAGTAGCCCTCCCAGGTACTaGAGGCACTCACCTGTCTCACTGGGGCGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RYPTGHSSPPRY*RHSPVSLGRKK Trigger: CTTCTTCCGCCCCAGTGAGACAGGTGAGTGCCTGCAGTACCTGGGAGGGCTACTGTGCCCTGTTGGGTACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166838.8 ENSMUST00000167678.2 |
||
| CDS CAA 90 bp | GGCGGTTCAGGCTCCTGCTGGGGCTCCTCACCAGGCTTTGGCTTCTaGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGACTTGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGSGSCWGSSPGFGF*GLEGPPGPEKDLDE Trigger: TTCATCCAAGTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
||
| CDS TCA 72 bp | GGGGCCGATGCAGGCTCACTGGTGCTTTGCTTTGTTTaGGCATCCGTTGGTTTGGGGCCACCCTCAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GADAGSLVLCFV*ASVGLGPPSRP Trigger: CGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCATCGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000151160.8 |
||
| CDS CCA 72 bp | ACAGGATCTCGGTCAACGGGCGGTTCAGGCTCCTGCTaGGGCTCCTCACCAGGCTTTGGCTTCTTGGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TGSRSTGGSGSC*GSSPGFGFLGL Trigger: TAAGCCCAAGAAGCCAAAGCCTGGTGAGGAGCCCCAGCAGGAGCCTGAACCGCCCGTTGACCGAGATCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 |
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| CDS CAA 72 bp | GGGGGCCGATGCAGGCTCACTGGTGCTTTGCTTTGTTaGAGCATCCGTTGGTTTGGGGCCACCCTCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGRCRLTGALLC*SIRWFGATLKA Trigger: GGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCATCGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000151160.8 |
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| CDS CAA 90 bp | GGCCCCTCGCGGCTACGGGACACAGGCACCATCTCCAGCTTGGCATaGTTAGGCAGGTTGGCAAATCTCCACTGGAGAGAGAGGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: GPSRLRDTGTISSLA*LGRLANLHWRERSS Trigger: GCTAGACCTCTCTCTCCAGTGGAGATTTGCCAACCTGCCTAACAATGCCAAGCTGGAGATGGTGCCTGTGTCCCGTAGCCGCGAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026135.15 ENSMUST00000149389.8 |
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| CDS TCA 72 bp | GCGTGTGGTCATCCAGGACCATTTTGGGTGGAGCGATaGCTGTCTCACTGGGGCGGAAGAAGCCCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ACGHPGPFWVER*LSHWGGRSPAG Trigger: TCCTGCAGGGCTTCTTCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAATGGTCCTGGATGACCACACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
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| CDS GCA 72 bp | AGCTCCCAGAGAGTCTGTCGGGAACAGAAAGCGTCCTaGAACCTGGAGCCGTCATCCAGCTGGAACGCGATG | + |
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Preference number: 6 (lower is better) Translates to: SSQRVCREQKAS*NLEPSSSWNAM Trigger: CATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTTTCTGTTCCCGACAGACTCTCTGGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
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| CDS CCA 72 bp | CAGAAAGCGTCCTGCAACCTGGAGCCGTCATCCAGCTaGAACGCGATGCGAACTATGTTCTCAGGCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: QKASCNLEPSSS*NAMRTMFSGPS Trigger: CGAGGGGCCTGAGAACATAGTTCGCATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
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| CDS CAA 72 bp | CCCTCGCGGCTACGGGACACAGGCACCATCTCCAGCTaGGCATTGTTAGGCAGGTTGGCAAATCTCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: PSRLRDTGTISS*ALLGRLANLHW Trigger: CCAGTGGAGATTTGCCAACCTGCCTAACAATGCCAAGCTGGAGATGGTGCCTGTGTCCCGTAGCCGCGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026135.15 ENSMUST00000149389.8 |
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| CDS CAA 72 bp | GGGAACGAAGGGGGCCGATGCAGGCTCACTGGTGCTTaGCTTTGTTTGAGCATCCGTTGGTTTGGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: GNEGGRCRLTGA*LCLSIRWFGAT Trigger: GGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCGTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000151160.8 |
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| CDS CAA 90 bp | TTCTCAGGCCCCTCGCGGCTACGGGACACAGGCACCATCTCCAGCTaGGCATTGTTAGGCAGGTTGGCAAATCTCCACTGGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSGPSRLRDTGTISS*ALLGRLANLHWRER Trigger: CCTCTCTCTCCAGTGGAGATTTGCCAACCTGCCTAACAATGCCAAGCTGGAGATGGTGCCTGTGTCCCGTAGCCGCGAGGGGCCTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026135.15 ENSMUST00000149389.8 |
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| CDS CAA 90 bp | TTGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGACTTGGATGAATaGGCCGAAGGTGATGTTAGAGGTCTCAAGGACGCAGACGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LGLEGPPGPEKDLDE*AEGDVRGLKDADGP Trigger: GGGCCCGTCTGCGTCCTTGAGACCTCTAACATCACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS GCA 72 bp | CTCATGTACACGCAGACAGGGGTCTTCTCACCCAGCTaGTGCAGACGCTCCCTGGTCTGTGCAAAATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LMYTQTGVFSPS*CRRSLVCAKWL Trigger: CAGCCATTTTGCACAGACCAGGGAGCGTCTGCAGCAGCTGGGTGAGAAGACCCCTGTCTGCGTGTACATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168714.9 |
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| CDS CCA 72 bp | GAGAGTCAGCGTGTGGTCATCCAGGACCATTTTGGGTaGAGCGATGACTGTCTCACTGGGGCGGAAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ESQRVVIQDHFG*SDDCLTGAEEA Trigger: GGCTTCTTCCGCCCCAGTGAGACAGTCATCGCTCCACCCAAAATGGTCCTGGATGACCACACGCTGACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106158.9 ENSMUST00000106160.9 |
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| CDS CAA 72 bp | CGAAGGGGGCCGATGCAGGCTCACTGGTGCTTTGCTTaGTTTGAGCATCCGTTGGTTTGGGGCCACCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RRGPMQAHWCFA*FEHPLVWGHPQ Trigger: TTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTGAGCCTGCATCGGCCCCCTTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000151160.8 |
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| CDS GCA 72 bp | ATGTACACGCAGACAGGGGTCTTCTCACCCAGCTGCTaGAGACGCTCCCTGGTCTGTGCAAAATGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: MYTQTGVFSPSC*RRSLVCAKWLR Trigger: TCTCAGCCATTTTGCACAGACCAGGGAGCGTCTGCAGCAGCTGGGTGAGAAGACCCCTGTCTGCGTGTACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168714.9 |
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| CDS CCA 72 bp | AGAGAGTCTGTCGGGAACAGAAAGCGTCCTGCAACCTaGAGCCGTCATCCAGCTGGAACGCGATGCGAACTA | + |
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Preference number: 6 (lower is better) Translates to: RESVGNRKRPAT*SRHPAGTRCEL Trigger: TAGTTCGCATCGCGTTCCAGCTGGATGACGGCTCCAGGTTGCAGGACGCTTTCTGTTCCCGACAGACTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000143844.9 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000153346.8 ENSMUST00000168097.8 ENSMUST00000168714.9 |
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| CDS CCA 72 bp | CACTGGTGCTTTGCTTTGTTTGAGCATCCGTTGGTTTaGGGCCACCCTCAAGGCCGGTCCCTGAGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HWCFALFEHPLV*GHPQGRSLRCL Trigger: CAAACACCTCAGGGACCGGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000151160.8 |
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| CDS CAA 72 bp | AGGCATCTCCAGGCTGGTAGTGGTGCTTTGCTTTGTTaGAGCATCCGTTGGTTTGGGGCCACCCTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RHLQAGSGALLC*SIRWFGATLKA Trigger: GGCCTTGAGGGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCACTACCAGCCTGGAGATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168510.2 |
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| CDS CAA 72 bp | GCTGGTGATAGGCATCTCCAGGCTGGTAGTGGTGCTTaGCTTTGTTTGAGCATCCGTTGGTTTGGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: AGDRHLQAGSGA*LCLSIRWFGAT Trigger: GGTGGCCCCAAACCAACGGATGCTCAAACAAAGCAAAGCACCACTACCAGCCTGGAGATGCCTATCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168510.2 |
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| CDS TCA 72 bp | CCAAAGTGCACAAGCGCAGCAGGGAAGAGGTTTGCCTaGAAGAGAGTCAGCGTGTGGTCATCCAGGACCATT | + |
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Preference number: 6 (lower is better) Translates to: PKCTSAAGKRFA*KRVSVWSSRTI Trigger: AATGGTCCTGGATGACCACACGCTGACTCTCTTTCAGGCAAACCTCTTCCCTGCTGCGCTTGTGCACTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS CAA 72 bp | TGGCACTACCACCTGTCAGGCCCAGTGACTGAAGGGTaGTGTTCTGTAAGGCAGCTCTACCAGTCACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: WHYHLSGPVTEG*CSVRQLYQSPH Trigger: ATGAGGTGACTGGTAGAGCTGCCTTACAGAACACAACCCTTCAGTCACTGGGCCTGACAGGTGGTAGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000131727.9 ENSMUST00000135346.8 ENSMUST00000149389.8 ENSMUST00000151160.8 ENSMUST00000168510.2 |
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| CDS CAA 72 bp | TTGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGACTaGGATGAATTGGCCGAAGGTGATGTTAGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGLEGPPGPEKD*DELAEGDVRGL Trigger: GAGACCTCTAACATCACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS CAA 72 bp | TGTAGCGGTCAGGGAATAGGACCCGCAGAGCCACCTTaGGGTAACGTTCCAGTTTCTCCTTCATCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSGQGIGPAEPP*GNVPVSPSSEP Trigger: AGGCTCAGATGAAGGAGAAACTGGAACGTTACCCAAAGGTGGCTCTGCGGGTCCTATTCCCTGACCGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000166838.8 ENSMUST00000167678.2 |
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| CDS CAA 90 bp | TTTGGCTTCTTGGGCTTAGAAGGGCCCCCAGGGCCAGAGAAAGACTaGGATGAATTGGCCGAAGGTGATGTTAGAGGTCTCAAGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: FGFLGLEGPPGPEKD*DELAEGDVRGLKDA Trigger: TGCGTCCTTGAGACCTCTAACATCACCTTCGGCCAATTCATCCAAGTCTTTCTCTGGCCCTGGGGGCCCTTCTAAGCCCAAGAAGCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 |
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| CDS TCA 72 bp | CCGTCCTCTGAAACTTCAGGTCGTATTCACTGGGGTTaGAGTCTTGCCGCCGGCATGTGTCTTCTAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: PSSETSGRIHWG*SLAAGMCLLVP Trigger: AGGTACTAGAAGACACATGCCGGCGGCAAGACTTCAACCCCAGTGAATACGACCTGAAGTTTCAGAGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026135.15 |
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| CDS TCA 72 bp | CCGTCCTCTGAAACTTCAGGTCGTATTCACTGGGGTTaGAGTCTTGCCGCCGGCATGTGTCTTCTAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: PSSETSGRIHWG*SLAAGMCLLVL Trigger: CAGTACTAGAAGACACATGCCGGCGGCAAGACTTCAACCCCAGTGAATACGACCTGAAGTTTCAGAGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149389.8 |
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| CDS CAA 72 bp | TGTGTTCTAGCAGCCCAGGTTCCAGATAGAGACCTGTaGGTTCTTCAGCTCCAAAGTGCACAAGCGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CVLAAQVPDRDL*VLQLQSAQAQQ Trigger: CTGCTGCGCTTGTGCACTTTGGAGCTGAAGAACCAACAGGTCTCTATCTGGAACCTGGGCTGCTAGAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026135.15 ENSMUST00000103016.8 ENSMUST00000106158.9 ENSMUST00000106159.10 ENSMUST00000106160.9 ENSMUST00000168714.9 |
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