Pregenerated sensors for ASPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021388Ensembl transcript IDs: ENSMUST00000021820.14, ENSMUST00000177948.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTATGTACTCTTCAAAATaGTGTTCTTGCCAGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VQFSVFVTLAMFPGITQCMYSSK*CSCQFC Trigger: ACAAAACTGGCAAGAACAGCATTTTGAAGAGTACAT...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATATGTACTCTTCAAAATaGTGTTCTTGCCAGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FSVFVTLAMFPGITQCAYMYSSK*CSCQFC Trigger: ACAAAACTGGCAAGAACAGCATTTTGAAGAGTACAT...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGTCACCCCTTCAAATaGCCCTGGTTCTATCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMCHPFK*PWFYPV Trigger: AACGGGATAGAACCAGGGGCATTTGAAGGGGTGACA...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGCCCTTCAAATGCCCCTaGTTCTATCCCGTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMPFKCP*FYPVVL Trigger: GAGAACAACGGGATAGAACCAGGGGCATTTGAAGGG...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCCCTTCAAATGCCCCTaGTTCTATCCCGTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCPFKCP*FYPVVL Trigger: GAGAACAACGGGATAGAACCAGGGGCATTTGAAGGG...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCTGTCACCCCTTCAAATaGCCCTGGTTCTATCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFCHPFK*PWFYPV Trigger: AACGGGATAGAACCAGGGGCATTTGAAGGGGTGACA...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCCCAAGACCCAGCCTTTaGAGTTCCCTGTACCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFPRPSL*SSLYRL Trigger: TAAACGGTACAGGGAACTGCAAAGGCTGGGTCTTGG...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCACTGGCTCTTTCGTTaGAAAAAGAGAGTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCHWLFR*KKRVVV Trigger: GACGACAACTCTCTTTTTCCAACGAAAGAGCCAGTG...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTTCAGCGATCCTGATATaGAATACTGTCACCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCSAILI*NTVTPS Trigger: TGAAGGGGTGACAGTATTCCATATCAGGATCGCTGA...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCATCTTTGGCACTGTTaGACAGAAGTCATTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCHLWHC*TEVIHS Trigger: GGAGTGAATGACTTCTGTCCAACAGTGCCAAAGATG...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGGCTGAACACTCATTCTaGCAAGAACACAACGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMAEHSF*QEHNEM Trigger: CATTTCGTTGTGTTCTTGGCAGAATGAGTGTTCAGC...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATCACTGGCTCTTTCGTTaGAAAAAGAGAGTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYHWLFR*KKRVVV Trigger: GACGACAACTCTCTTTTTCCAACGAAAGAGCCAGTG...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATTCAGCGATCCTGATATaGAATACTGTCACCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYSAILI*NTVTPS Trigger: TGAAGGGGTGACAGTATTCCATATCAGGATCGCTGA...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGTTCTCAAGAGGGTTTaGACTCATTTCCAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCVLKRV*THFQNM Trigger: CATGTTTTGGAAATGAGTGCAAACCCTCTTGAGAAC...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCCCAAATGGACATGTTaGAAACAAATCGAAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCPKWTC*KQIERE Trigger: TTCCCTTTCGATTTGTTTCCAACATGTCCATTTGGG...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCCATCTTTGGCACTGTTaGACAGAAGTCATTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFHLWHC*TEVIHS Trigger: GGAGTGAATGACTTCTGTCCAACAGTGCCAAAGATG...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTAGATTTCTTCATCTTTaGCACTGTTGGACAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCRFLHL*HCWTEV Trigger: GACTTCTGTCCAACAGTGCCAAAGATGAAGAAATCT...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGAATCAGAGCATAAAGTaGAGTGAGTCCTTTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMNQSIK*SESFKV Trigger: GACTTTAAAGGACTCACTTCACTTTATGCTCTGATT...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGAGAAAGGTTTTTGGGTaGATCTTTGTTAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMRKVFG*IFVSLL Trigger: CAACAAGCTAACAAAGATTCACCCAAAAACCTTTCT...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATGTTCTCAAGAGGGTTTaGACTCATTTCCAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYVLKRV*THFQNM Trigger: CATGTTTTGGAAATGAGTGCAAACCCTCTTGAGAAC...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTAACACAACGAAATGTTaGAGGTTGTATTTCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCNTTKC*RLYFPV Trigger: TACTGGGAAATACAACCTGCAACATTTCGTTGTGTT...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGAACACAACGAAATGTTaGAGGTTGTATTTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMNTTKC*RLYFPV Trigger: TACTGGGAAATACAACCTGCAACATTTCGTTGTGTT...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR GCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCGCTGAACACTCATTCTaGCAAGAACACAACGAAATG | + |
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Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFAEHSF*QEHNEM Trigger: CATTTCGTTGTGTTCTTGGCAGAATGAGTGTTCAGC...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATCCCAAATGGACATGTTaGAAACAAATCGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYPKWTC*KQIERE Trigger: TTCCCTTTCGATTTGTTTCCAACATGTCCATTTGGG...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCACTTAGTTGGTTGTaGGATAAATATAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMSLSWL*DKYSLL Trigger: GAGAAGGCTATATTTATCCCACAACCAACTAAGTGA...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTTATCTCTCTCACACGTaGTATATTAGCAAAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VQFSVFVTLAMFPGITQCYLSHT*YISKSS Trigger: GGAACTTTTGCTAATATACCACGTGTGAGAGAGATA...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATAGATTTCTTCATCTTTaGCACTGTTGGACAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYRFLHL*HCWTEV Trigger: GACTTCTGTCCAACAGTGCCAAAGATGAAGAAATCT...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR TCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATAGAAAGGTTTTTGGGTaGATCTTTGTTAGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYRKVFG*IFVSLL Trigger: CAACAAGCTAACAAAGATTCACCCAAAAACCTTTCT...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR TCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCAAGCATTCATTCCCTTaGACGTGTCCTTTTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFKHSFP*TCPFVS Trigger: AGATACAAAAGGACACGTTCAAGGGAATGAATGCTT...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGGGAATTTCACTTAGTTaGTTGTGGGATAAATATAGC | + |
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Preference number: 4 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMGISLS*LWDKYS Trigger: GCTATATTTATCCCACAACCAACTAAGTGAAATTCC...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATTATCTCTCTCACACGTaGTATATTAGCAAAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYYLSHT*YISKSS Trigger: GGAACTTTTGCTAATATACCACGTGTGAGAGAGATA...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR TCA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCAATCAGAGCATAAAGTaGAGTGAGTCCTTTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFNQSIK*SESFKV Trigger: GACTTTAAAGGACTCACTTCACTTTATGCTCTGATT...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CCA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATGGAATTTCACTTAGTTaGTTGTGGGATAAATATAGC | + |
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Preference number: 4 (lower is better) Translates to: FSVFVTLAMFPGITQCAYGISLS*LWDKYS Trigger: GCTATATTTATCCCACAACCAACTAAGTGAAATTCC...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS GCA 90 bp | GTCATCATCTGTGTCTTCCATATCCTTCAACATCATATTCTTCAGTaGTGTGTGGGAAGGGCTAAAGAAGGGTTTGGCAGAGCACACAGC | + |
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Preference number: 5 (lower is better) Translates to: VIICVFHILQHHILQ*CVGRAKEGFGRAHS Trigger: GCTGTGTGCTCTGCCAAACCCTTCTTTAGCCCTTCCCACACAGCACTGAAGAATATGATGTTGAAGGATATGGAAGACACAGATGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS GCA 90 bp | TTTTGCTTCAGCGATCCTGATATGGAATACTGTCACCCCTTCAAATaGCCCTGGTTCTATCCCGTTGTTCTCAAGAGGGTTTGCACTCAT | + |
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Preference number: 5 (lower is better) Translates to: FCFSDPDMEYCHPFK*PWFYPVVLKRVCTH Trigger: ATGAGTGCAAACCCTCTTGAGAACAACGGGATAGAACCAGGGGCATTTGAAGGGGTGACAGTATTCCATATCAGGATCGCTGAAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CCA 90 bp | TCTGTGTCTTCCATATCCTTCAACATCATATTCTTCAGTGCTGTGTaGGAAGGGCTAAAGAAGGGTTTGGCAGAGCACACAGCCAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SVSSISFNIIFFSAV*EGLKKGLAEHTAKS Trigger: GCTTTTGGCTGTGTGCTCTGCCAAACCCTTCTTTAGCCCTTCCCACACAGCACTGAAGAATATGATGTTGAAGGATATGGAAGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CCA 90 bp | TTCAGCGATCCTGATATGGAATACTGTCACCCCTTCAAATGCCCCTaGTTCTATCCCGTTGTTCTCAAGAGGGTTTGCACTCATTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: FSDPDMEYCHPFKCP*FYPVVLKRVCTHFQ Trigger: TTGGAAATGAGTGCAAACCCTCTTGAGAACAACGGGATAGAACCAGGGGCATTTGAAGGGGTGACAGTATTCCATATCAGGATCGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGGGCTAAAGAAGGGTTaGGCAGAGCACACAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCGLKKG*AEHTAK Trigger: TTTGGCTGTGTGCTCTGCCAAACCCTTCTTTAGCCC...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGCCTGGTTCTATCCCGTaGTTCTCAAGAGGGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMPGSIP*FSRGFA Trigger: TGCAAACCCTCTTGAGAACAACGGGATAGAACCAGG...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCGGGCTAAAGAAGGGTTaGGCAGAGCACACAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFGLKKG*AEHTAK Trigger: TTTGGCTGTGTGCTCTGCCAAACCCTTCTTTAGCCC...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCACTGGCTCTTTCGTaGGAAAAAGAGAGTTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMSLALS*EKESCR Trigger: ACGACAACTCTCTTTTTCCAACGAAAGAGCCAGTGA...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTTCATCTTTGGCACTGTaGGACAGAAGTCATTCACTC | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCSSLAL*DRSHSL Trigger: GAGTGAATGACTTCTGTCCAACAGTGCCAAAGATGA...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGACCCAAATGGACATGTaGGAAACAAATCGAAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMTQMDM*ETNRKG Trigger: TCCCTTTCGATTTGTTTCCAACATGTCCATTTGGGT...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGCAAATGGAATGTTGTTaGGAACCGATGTCAGACCTA | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMQMECC*EPMSDL Trigger: TAGGTCTGACATCGGTTCCAAACAACATTCCATTTG...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTCAAATGGAATGTTGTTaGGAACCGATGTCAGACCTA | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCQMECC*EPMSDL Trigger: TAGGTCTGACATCGGTTCCAAACAACATTCCATTTG...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGGTAGGCCTTTTGGAATaGAGGTTAGTTTTGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMVGLLE*RLVLLQ Trigger: CTGAAGCAAAACTAACCTCAATTCCAAAAGGCCTAC...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTTGGTGGTAGGCCTTTaGGAATTGAGGTTAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMLVVGL*ELRLVL Trigger: CAAAACTAACCTCAATTCCAAAAGGCCTACCACCAA...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTATATCTGTGATTCTGTaGTTTCCAAGACCCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCISVIL*FPRPSL Trigger: AAGGCTGGGTCTTGGAAACAACAGAATCACAGATAT...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATTCATCTTTGGCACTGTaGGACAGAAGTCATTCACTC | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYSSLAL*DRSHSL Trigger: GAGTGAATGACTTCTGTCCAACAGTGCCAAAGATGA...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS TCA 90 bp | CTTTGGCACTGTTGGACAGAAGTCATTCACTCCCACTTTTGCAATTaGATTATAATGAAGGAAGATTATCTGGAGGTATTTCAACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LWHCWTEVIHSHFCN*IIMKEDYLEVFQLL Trigger: CAGGAGTTGAAATACCTCCAGATAATCTTCCTTCATTATAATTCAATTGCAAAAGTGGGAGTGAATGACTTCTGTCCAACAGTGCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCTCACTGGCTCTTTCGTaGGAAAAAGAGAGTTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFSLALS*EKESCR Trigger: ACGACAACTCTCTTTTTCCAACGAAAGAGCCAGTGA...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGGTATCAAATGGAATGTaGTTTGGAACCGATGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMVSNGM*FGTDVR Trigger: TCTGACATCGGTTCCAAACAACATTCCATTTGATAC...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGTTCTCAAGAGGGTTaGCACTCATTTCCAAAACAT | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMCSQEG*HSFPKH Trigger: ATGTTTTGGAAATGAGTGCAAACCCTCTTGAGAACA...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATGTAGGCCTTTTGGAATaGAGGTTAGTTTTGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYVGLLE*RLVLLQ Trigger: CTGAAGCAAAACTAACCTCAATTCCAAAAGGCCTAC...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATTTGGTGGTAGGCCTTTaGGAATTGAGGTTAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYLVVGL*ELRLVL Trigger: CAAAACTAACCTCAATTCCAAAAGGCCTACCACCAA...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTACGAAATGTTGCAGGTaGTATTTCCCAGTACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCTKCCR*YFPVLH Trigger: ATGAAGTACTGGGAAATACAACCTGCAACATTTCGT...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGACGAAATGTTGCAGGTaGTATTTCCCAGTACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMTKCCR*YFPVLH Trigger: ATGAAGTACTGGGAAATACAACCTGCAACATTTCGT...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATGTATCAAATGGAATGTaGTTTGGAACCGATGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYVSNGM*FGTDVR Trigger: TCTGACATCGGTTCCAAACAACATTCCATTTGATAC...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTTGGTTAGAAAGGTTTTaGGGTGAATCTTTGTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: VQFSVFVTLAMFPGITQCWLERF*GESLLA Trigger: AGCTAACAAAGATTCACCCAAAAACCTTTCTAACCA...ACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TGTTCAGTTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGGCCTTCTCAATTTCTTaGTGGTTAGAAAGGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: CSVFSFCHLSYVSRHYPMAFSIS*WLERFL Trigger: CAAAAACCTTTCTAACCACAAAGAAATTGAGAAGGC...CATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAACTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATAAGATTTCTTCATCTTaGGCACTGTTGGACAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYKISSS*ALLDRS Trigger: ACTTCTGTCCAACAGTGCCAAAGATGAAGAAATCTT...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | GATATAAAATTGATTGGCGTCCATACTGTTCCAAAGGGATATCCTGAAATATTCGAACACAACGAAATGTaGCAGGTTGTATTTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: DIKLIGVHTVPKGYPEIFEHNEM*QVVFPS Trigger: ACTGGGAAATACAACCTGCAACATTTCGTTGTGTTC...GAATATTTCAGGATATCCCTTTGGAACAGTATGGACGCCAATCAATTTTATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATTGGTTAGAAAGGTTTTaGGGTGAATCTTTGTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYWLERF*GESLLA Trigger: AGCTAACAAAGATTCACCCAAAAACCTTTCTAACCA...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAGTTTTTGTCACCTTAGCTATGTTTCCAGGCATTACCCAATGTGCATATGCCTTCTCAATTTCTTaGTGGTTAGAAAGGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FSVFVTLAMFPGITQCAYAFSIS*WLERFL Trigger: CAAAAACCTTTCTAACCACAAAGAAATTGAGAAGGC...ATATGCACATTGGGTAATGCCTGGAAACATAGCTAAGGTGACAAAAACTGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | TTCTTCAGTGCTGTGTGGGAAGGGCTAAAGAAGGGTTaGGCAGAGCACACAGCCAAAAGCAGTAGCATCACA | + |
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Preference number: 6 (lower is better) Translates to: FFSAVWEGLKKG*AEHTAKSSSIT Trigger: TGTGATGCTACTGCTTTTGGCTGTGTGCTCTGCCAAACCCTTCTTTAGCCCTTCCCACACAGCACTGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 90 bp | AACATCATATTCTTCAGTGCTGTGTGGGAAGGGCTAAAGAAGGGTTaGGCAGAGCACACAGCCAAAAGCAGTAGCATCACATACTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NIIFFSAVWEGLKKG*AEHTAKSSSITYSF Trigger: GAAGGAGTATGTGATGCTACTGCTTTTGGCTGTGTGCTCTGCCAAACCCTTCTTTAGCCCTTCCCACACAGCACTGAAGAATATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CCA 72 bp | TCCATATCCTTCAACATCATATTCTTCAGTGCTGTGTaGGAAGGGCTAAAGAAGGGTTTGGCAGAGCACACA | + |
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Preference number: 6 (lower is better) Translates to: SISFNIIFFSAV*EGLKKGLAEHT Trigger: TGTGTGCTCTGCCAAACCCTTCTTTAGCCCTTCCCACACAGCACTGAAGAATATGATGTTGAAGGATATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS GCA 72 bp | ATATCTGTGATTCTGTTGTTTCCAAGACCCAGCCTTTaGAGTTCCCTGTACCGTTTAAGATCTTCAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ISVILLFPRPSL*SSLYRLRSSSS Trigger: GGAACTTGAAGATCTTAAACGGTACAGGGAACTGCAAAGGCTGGGTCTTGGAAACAACAGAATCACAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | AAAGGGTTCACTGGCTCTTTCGTTGGAAAAAGAGAGTaGTCGTCATCATCGTTATCGTCATCATCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: KGFTGSFVGKRE*SSSSLSSSSVS Trigger: AGACACAGATGATGACGATAACGATGATGACGACAACTCTCTTTTTCCAACGAAAGAGCCAGTGAACCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | GAAGGTCAACCATTCGAGTATCAAATGGAATGTTGTTaGGAACCGATGTCAGACCTAGATCAGAGCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGQPFEYQMECC*EPMSDLDQSSE Trigger: TTCACTGCTCTGATCTAGGTCTGACATCGGTTCCAAACAACATTCCATTTGATACTCGAATGGTTGACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | ATGCCCCTGGTTCTATCCCGTTGTTCTCAAGAGGGTTaGCACTCATTTCCAAAACATGTAAAGCATTCATTC | + |
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Preference number: 6 (lower is better) Translates to: MPLVLSRCSQEG*HSFPKHVKHSF Trigger: GAATGAATGCTTTACATGTTTTGGAAATGAGTGCAAACCCTCTTGAGAACAACGGGATAGAACCAGGGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 90 bp | TATTATTTTGAAGGTCAACCATTCGAGTATCAAATGGAATGTTGTTaGGAACCGATGTCAGACCTAGATCAGAGCAGTGAACAACTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: YYFEGQPFEYQMECC*EPMSDLDQSSEQLE Trigger: CTCGAGTTGTTCACTGCTCTGATCTAGGTCTGACATCGGTTCCAAACAACATTCCATTTGATACTCGAATGGTTGACCTTCAAAATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 90 bp | CAACGAAATGTTGCAGGTTGTATTTCCCAGTACTTCATTGGGTTGTaGAATAAACTTATTGCACTGTATAAAGATTTCTTCATCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRNVAGCISQYFIGL*NKLIALYKDFFIFG Trigger: GCCAAAGATGAAGAAATCTTTATACAGTGCAATAAGTTTATTCAACAACCCAATGAAGTACTGGGAAATACAACCTGCAACATTTCGTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | ATAAACTTATTGCACTGTATAAAGATTTCTTCATCTTaGGCACTGTTGGACAGAAGTCATTCACTCCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: INLLHCIKISSS*ALLDRSHSLPL Trigger: AAGTGGGAGTGAATGACTTCTGTCCAACAGTGCCAAAGATGAAGAAATCTTTATACAGTGCAATAAGTTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CCA 72 bp | TTGGGAAGATTAAGTGGAATTTCACTTAGTTGGTTGTaGGATAAATATAGCCTTCTCAATTTCTTTGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGRLSGISLSWL*DKYSLLNFFVV Trigger: AACCACAAAGAAATTGAGAAGGCTATATTTATCCCACAACCAACTAAGTGAAATTCCACTTAATCTTCCCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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| CDS CAA 72 bp | GATTTGGGAAGATTAAGTGGAATTTCACTTAGTTGGTaGTGGGATAAATATAGCCTTCTCAATTTCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: DLGRLSGISLSW*WDKYSLLNFFV Trigger: CACAAAGAAATTGAGAAGGCTATATTTATCCCACAACCAACTAAGTGAAATTCCACTTAATCTTCCCAAATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021820.14 ENSMUST00000177948.2 |
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