RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASPM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033952

Ensembl transcript IDs: ENSMUST00000053364.12, ENSMUST00000200083.5

Found 456 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCTGAAGCCCTGGCCTaGGGCGCGCAGCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIAEALA*GAQQRQ
Trigger: CTGTCGCTGCTGCGCGCCGCAGGCCAGGGCTTCAGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTGCTGAAGCCCTGGCCTaGGGCGCGCAGCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGAEALA*GAQQRQ
Trigger: CTGTCGCTGCTGCGCGCCGCAGGCCAGGGCTTCAGC...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGAGCCTTCATCCCCCTaGATGCAGCCTGCAGTCGAA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHEPSSP*MQPAVE
Trigger: TTCGACTGCAGGCTGCATTCAGGGGGATGAAGGCTC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCCCTAACGGCAGCCTaGAGGATTACAGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPLTAA*RITAAC
Trigger: GCATGCTGCTGTAATCCTTCAGGCTGCCGTTAGGGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCCCCTGAATGCAGCCTaGAGTCGAATGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHPLNAA*SRMVAA
Trigger: AGCTGCCACCATTCGACTGCAGGCTGCATTCAGGGG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACGTGCCCTCACATGCTaGTGGATGACTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKRALTC*WMTAAA
Trigger: AGCTGCAGCAGTCATCCAGCAGCATGTGAGGGCACG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTACGCCAAGTGCTaGCTCTTCCCTGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKMYAKC*LFPAAR
Trigger: ACGGGCTGCAGGGAAGAGGCAGCACTTGGCGTACAT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGCCCTCACATGCTGCTaGATGACTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVALTCC*MTAAAA
Trigger: AGCAGCTGCAGCAGTCATCCAGCAGCATGTGAGGGC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCGCCTATACCAAGCTTaGATCCTGCAGGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVRLYQA*ILQAAS
Trigger: GGAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAGTCCGCCTCACTCTTaGTCCTCTGACTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSPPHS*SSDSSL
Trigger: CAAGCTGGAGTCAGAGGAGCAAGAGTGAGGCGGACT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCTTCTGTATCACGGATaGAGCCCTGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVLLYHG*SPVLLE
Trigger: CTCCAGCAGGACAGGGCTGCATCCGTGATACAGAAG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTGTGAGGCCAGTTTTTaGGAACGGTACCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHCEASF*ERYHRW
Trigger: CCAGCGGTGGTACCGTTCCCAAAAACTGGCCTCACA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTATCTCTGCTGCACCATaGTTGCCGCCTTCCTCAACC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVISAAP*LPPSST
Trigger: GGTTGAGGAAGGCGGCAACCATGGTGCAGCAGAGAT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATTTCTTCTTCAGGCCTaGCCGCTCCAGGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKFLLQA*PLQAAY
Trigger: ATAAGCAGCCTGGAGCGGTCAGGCCTGAAGAAGAAA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGGTCACCTTCACCACTaGGGAAATCCCGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEGHLHH*GNPVKR
Trigger: CCTTTTCACGGGATTTCCTCAGTGGTGAAGGTGACC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGGTCACCTTCACCACTaGGGAAATCCCGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVGHLHH*GNPVKR
Trigger: CCTTTTCACGGGATTTCCTCAGTGGTGAAGGTGACC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGCACGCCAATGCCTCTaGATTGTAACTGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEARQCL*IVTVAQ
Trigger: TTGGGCCACAGTTACAATTCAGAGGCATTGGCGTGC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCCCTAAAGTGGGCTTaGATCACACAAGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPLKWA*ITQAAR
Trigger: TCGAGCTGCTTGTGTGATTCAAGCCCACTTTAGGGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACCCCTAAAGTGGGCTTaGATCACACAAGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKPLKWA*ITQAAR
Trigger: TCGAGCTGCTTGTGTGATTCAAGCCCACTTTAGGGG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTGGAGCCAACATGCATaGGCTTCACGTCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVWSQHA*ASRRVL
Trigger: AAGCACTCGACGTGAAGCTCATGCATGTTGGCTCCA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAATGGAGCCAACATGCATaGGCTTCACGTCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEWSQHA*ASRRVL
Trigger: AAGCACTCGACGTGAAGCTCATGCATGTTGGCTCCA...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGTGAAGCCCTGTTCCTaGTTTTCCTTCCAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEVKPCS*FSFQRS
Trigger: CGAACGCTGGAAGGAAAAGCAGGAACAGGGCTTCAC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGTGAAGCCCTGTTCCTaGTTTTCCTTCCAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKVKPCS*FSFQRS
Trigger: CGAACGCTGGAAGGAAAAGCAGGAACAGGGCTTCAC...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAATTTGCCGGCGTACTTTaGAGCCTCTGTAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEFAGVL*SLCKLP
Trigger: AGGCAGCTTACAGAGGCTGCAAAGTACGCCGGCAAA...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCTTCCCTGCAGCCCGTaGCCTCACATGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFLPCSP*PHMLLD
Trigger: ATCCAGCAGCATGTGAGGGCACGGGCTGCAGGGAAG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGCTCGTCAGTCAGTaGAACTCCCCGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKMLVSQ*NSPRLE
Trigger: CTCAAGTCTCGGGGAGTTCCACTGACTGACGAGCAT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGAACGGTACCACCGCTaGATAAACAGTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVERYHR*INSAAA
Trigger: AGCAGCTGCACTGTTTATCCAGCGGTGGTACCGTTC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGGTTCTTGCAACAGTTaGGGGTGTAGATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHGSCNS*GCRFQR
Trigger: CCTCTGGAATCTACACCCTCAACTGTTGCAAGAACC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGGTTCTTGCAACAGTTaGGGGTGTAGATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKGSCNS*GCRFQR
Trigger: CCTCTGGAATCTACACCCTCAACTGTTGCAAGAACC...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCCCAAGAAGCTAAGGTaGCGAGAAAGGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHPKKLR*RERSPS
Trigger: TGAAGGTGACCTTTCTCGTCACCTTAGCTTCTTGGG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCATCAAGTGGTGTCTaGACGTGGCTCACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVSSSGV*TWLTGN
Trigger: GTTACCTGTGAGCCACGTTCAGACACCACTTGATGA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCATCAAGTGGTGTCTaGACGTGGCTCACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSSSGV*TWLTGN
Trigger: GTTACCTGTGAGCCACGTTCAGACACCACTTGATGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTAATCTGCAACCTGTATaGATGGCGAGCCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVNLQPV*MASLHP
Trigger: GGGATGAAGGCTCGCCATTCATACAGGTTGCAGATT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCGCCTATACCAAGCTTaGATCCTGCAGGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIRLYQA*ILQAAS
Trigger: GGAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCCCAGATCCCTAGCTaGAGATCGCACCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSQIPS*RSHQME
Trigger: TTCCATTTGGTGCGATCTGCAGCTAGGGATCTGGGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTGGATGTACGCCAAGTaGTGCCTCTTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGWMYAK*CLFPAA
Trigger: GGCTGCAGGGAAGAGGCAGCACTTGGCGTACATCCA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGCCCTGTGCATCTTTTaGACCCTTTTCCTTACCACC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHALCIF*TLFLTT
Trigger: GGTGGTAAGGAAAAGGGTGCAAAAGATGCACAGGGC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACCTTCTCGCCAGCTGTaGAGAGAGGTAACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKPSRQL*REVTFN
Trigger: ATTGAAGGTTACCTCTCTGCACAGCTGGCGAGAAGG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGTGACAGTAGGCAGCTaGTGTAAAGTGGAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVVTVGS*CKVEKP
Trigger: CGGCTTTTCCACTTTACAGCAGCTGCCTACTGTCAC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGTGACAGTAGGCAGCTaGTGTAAAGTGGAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEVTVGS*CKVEKP
Trigger: CGGCTTTTCCACTTTACAGCAGCTGCCTACTGTCAC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAGCTTTACTCACTCCTaGCTCCACAACGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSFTHS*LHNGKR
Trigger: TCTCTTCCCGTTGTGGAGCCAGGAGTGAGTAAAGCT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAGCTTTACTCACTCCTaGCTCCACAACGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSFTHS*LHNGKR
Trigger: TCTCTTCCCGTTGTGGAGCCAGGAGTGAGTAAAGCT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCTCCCACTGTTCCGTaGCTCTTTCTTTTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSPTVP*LFLFRA
Trigger: TGCTCGGAAAAGAAAGAGCCACGGAACAGTGGGAGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCCTCCTGGCTGAAATaGAAGCTCGGAAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPSWLK*KLGNES
Trigger: AGACTCATTTCCGAGCTTCCATTTCAGCCAGGAGGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTTTCTTCTTCAGGCCTaGCCGCTCCAGGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIFLLQA*PLQAAY
Trigger: ATAAGCAGCCTGGAGCGGTCAGGCCTGAAGAAGAAA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCTCTGACTCCAGCTTaGAGGGTTTTAATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPLTPA*RVLIAF
Trigger: GAAGGCTATTAAAACCCTTCAAGCTGGAGTCAGAGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGACGTCACTGTTGTCTaGCAGAGGGATCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIDVTVV*QRDQFS
Trigger: GGAGAACTGATCCCTCTGGCAGACAACAGTGACGTC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCACCTGGAAAGCCAGTaGTATTTTCCAAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHHLESQ*YFPKQP
Trigger: GGGTTGCTTTGGAAAATAGCACTGGCTTTCCAGGTG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTTGCCTCTGCAGTTCTaGAGCTGTGTGTACTTGGAT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVLPLQF*SCVYLD
Trigger: ATCCAAGTACACACAGCTGCAGAACTGCAGAGGCAA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAGCCTGGATGAGAGCTaGAGCCCTGTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISLDES*SPVHFL
Trigger: CAAGAAATGCACAGGGCTGCAGCTCTCATCCAGGCT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTACAGCAGATCTCTGCTaGAGGAAGGACTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGTADLC*RKDCLA
Trigger: GGCAAGGCAGTCCTTCCTGCAGCAGAGATCTGCTGT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTACAGCAGATCTCTGCTaGAGGAAGGACTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFTADLC*RKDCLA
Trigger: GGCAAGGCAGTCCTTCCTGCAGCAGAGATCTGCTGT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTAAAACAGCAGATCTCTaGTGCAGGAAGGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVKTADL*CRKDCL
Trigger: AAGGCAGTCCTTCCTGCAGCAGAGATCTGCTGTTTT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCTTCTGTATCACGGATaGAGCCCTGTCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFLLYHG*SPVLLE
Trigger: CTCCAGCAGGACAGGGCTGCATCCGTGATACAGAAG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTACAGGAGAGGAACAGTaGGGTGTCTATATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVTGEEQ*GVYIQL
Trigger: CAGCTGAATATAGACACCCCACTGTTCCTCTCCTGT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGGTGCAATTTATGCTTaGCATAAAGGGTGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEGAIYA*HKGWLG
Trigger: TCCGAGCCACCCTTTATGCCAAGCATAAATTGCACC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATTCTAAAAGTAGCCTaGATGAGAGCTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEILKVA*MRAAAL
Trigger: CAGGGCTGCAGCTCTCATCCAGGCTACTTTTAGAAT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGCAGCTGCTGTAAAGTaGAAAAGCCGAGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVAAAVK*KSRVLA
Trigger: AGCCAAAACTCGGCTTTTCCACTTTACAGCAGCTGC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCATTTACAAGAAATGTaGCAATCTCCCTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHHLQEM*QSPSLP
Trigger: GGGGAGTGAGGGAGATTGTCACATTTCTTGTAAATG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTAATTTAGCCACCAAGTaGAGCCCTGTTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVNLATK*SPVPAF
Trigger: AAAAGCAGGAACAGGGCTTCACTTGGTGGCTAAATT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGCATCCTCTAAAGTGTaGCTGCAGTTTGATACAGGA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVASSKV*LQFDTG
Trigger: TCCTGTATCAAACTGCAGTCACACTTTAGAGGATGC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAGTTCTTCCTTTGACTaGTTTGTGCTCTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSSSFD*FVLCRH
Trigger: GTGCCTACAGAGCACAAATCAGTCAAAGGAAGAACT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACTGCTGTTCTCATCTTaGGGTACCTTACTCTTGACT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKLLFSS*GTLLLT
Trigger: AGTCAAGAGTAAGGTACCTCAAGATGAGAACAGCAG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTCACTCTTGCTCCTCTaGCTCCAGCTTGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISLLLL*LQLEGF
Trigger: AAACCCTTCAAGCTGGAGTCAGAGGAGCAAGAGTGA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCCCCTAAAATGTGACTaGATGAGTGTTGCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHPLKCD*MSVAAK
Trigger: TTTCGCAGCAACACTCATTCAGTCACATTTTAGGGG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTGCATAGTCTTCAGATaGCTTCTGGTTTTCATCCCC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHCIVFR*LLVFIP
Trigger: GGGGATGAAAACCAGAAGTCATCTGAAGACTATGCA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAGATTTTCACAAGGCTaGAGTGGGCTCCTAATTCTG +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHRFSQG*SGLLIL
Trigger: CAGAATTAGGAGCCCACTGCAGCCTTGTGAAAATCT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATGCTACTTTTCCATTTaGATCTCCCACTGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKCYFSI*ISHCSV
Trigger: CACGGAACAGTGGGAGATGCAAATGGAAAAGTAGCA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGACGTCACTGTTGTCTaGCAGAGGGATCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFDVTVV*QRDQFS
Trigger: GGAGAACTGATCCCTCTGGCAGACAACAGTGACGTC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGAACTTAGACAAGGCTaGTTCATGACCATCCCGAAA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHELRQG*FMTIPK
Trigger: TTTCGGGATGGTCATGAAGCAGCCTTGTCTAAGTTC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAGGGTTTTCTCTCTGTaGCTGTCCACAACATCCTTA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHRVFSL*LSTTSL
Trigger: TAAGGATGTTGTGGACAGGCACAGAGAGAAAACCCT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCTGAAACACCAGAGCTaGATGACGGAGCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGILKHQS*MTELDV
Trigger: TACATCCAGCTCCGTCATGCAGCTCTGGTGTTTCAG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTAGAGTAGCAGCCAGGTaGATAGCTTTTAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVRVAAR*IAFKCL
Trigger: GAGACACTTAAAAGCTATGCACCTGGCTGCTACTCT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCACAGTAGCCGCCCTGTaGATCTTTTGCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGITVAAL*IFCTLF
Trigger: GAAAAGGGTGCAAAAGATGCACAGGGCGGCTACTGT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATTCACAAGGCTGCAGTaGGCTCCTAATTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKFTRLQ*APNSVF
Trigger: AAAGACAGAATTAGGAGCCCACTGCAGCCTTGTGAA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTTTCAGATCTGCTGCTaGGAGTCTGTGCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIFQICC*ESVHAD
Trigger: GTCAGCATGCACAGACTCCCAGCAGCAGATCTGAAA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCAGGTAGCTTTTCTCTaGCATTGGTGGGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHQVAFL*HWWVSF
Trigger: AAAGGAAACCCACCAATGCCAGAGAAAAGCTACCTG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTATGCTCGTCAGTCAGTaGAACTCCCCGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFMLVSQ*NSPRLE
Trigger: CTCAAGTCTCGGGGAGTTCCACTGACTGACGAGCAT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCCTGCAGTCGAATGGTaGCAGCTCGTTTCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIPAVEW*QLVSAN
Trigger: ATTTGCAGAAACGAGCTGCCACCATTCGACTGCAGG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGTGACCGCTGCTTTGTaGCATTCAGCTACCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFVTAAL*HSATRF
Trigger: AAAGCGGGTAGCTGAATGCCACAAAGCAGCGGTCAC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGTTGTCGGGAATACTTaGCATAAAGTCTTGCACGGT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVVVGNT*HKVLHG
Trigger: ACCGTGCAAGACTTTATGCCAAGTATTCCCGACAAC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATTCTCACAGCAAAGTaGAGAGAGTCTGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEILTAK*RESGND
Trigger: GTCGTTACCAGACTCTCTCCACTTTGCTGTGAGAAT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCCCAAGAAGCTAAGGTaGCGAGAAAGGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGPKKLR*RERSPS
Trigger: TGAAGGTGACCTTTCTCGTCACCTTAGCTTCTTGGG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACATTGTGCATCTTTTaGACTCGACTTATTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTETLCIF*TRLIAG
Trigger: CCCTGCAATAAGTCGAGTTCAAAAGATGCACAATGT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGCTTTGTCTCTTTCCTaGTGGTGTTTCAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEALSLS*WCFRSL
Trigger: AAGAGATCTGAAACACCATCAGGAAAGAGACAAAGC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGCTTTGTCTCTTTCCTaGTGGTGTTTCAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHALSLS*WCFRSL
Trigger: AAGAGATCTGAAACACCATCAGGAAAGAGACAAAGC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTATAACTTTTGGGCTTaGAAGCACCGAACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHYNFWA*KHRTLL
Trigger: GAGAAGAGTTCGGTGCTTTCAAGCCCAAAAGTTATA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAGTAGAAACTCTGAATaGCAAGAGCCGCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISRNSE*QEPPCT
Trigger: TGTGCAAGGCGGCTCTTGTCATTCAGAGTTTCTACT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCACGGTACTGTCTCTaGATCCAAATGGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIARYCL*IQMAVF
Trigger: GAAAACTGCCATTTGGATTCAGAGACAGTACCGTGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAACAGCAAGTTCTTGTaGAAATGCTGGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHNSKFL*KCWHSS
Trigger: AGAAGAGTGCCAGCATTTTCACAAGAACTTGCTGTT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAACAGCAAGTTCTTGTaGAAATGCTGGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKNSKFL*KCWHSS
Trigger: AGAAGAGTGCCAGCATTTTCACAAGAACTTGCTGTT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGTATCCATTACCAGTTaGATAGCTTGCAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEVSITS*IACREF
Trigger: AAACTCCCTGCAAGCTATTCAACTGGTAATGGATAC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTTTCTACATCCAGCCTaGATGAGCACTGCTGATTTA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVFLHPA*MSTADL
Trigger: TAAATCAGCAGTGCTCATTCAGGCTGGATGTAGAAA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATCCGCTTTGAGGTATaGCCTTCTTTCTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKIRFEV*PSFFVV
Trigger: AACCACAAAGAAAGAAGGGCATACCTCAAAGCGGAT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGGTCAAATGAGACTGTaGTACAGCAACAATGGATCT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEGQMRL*YSNNGS
Trigger: AGATCCATTGTTGCTGTAGCACAGTCTCATTTGACC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGGTCAAATGAGACTGTaGTACAGCAACAATGGATCT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKGQMRL*YSNNGS
Trigger: AGATCCATTGTTGCTGTAGCACAGTCTCATTTGACC...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACATAGAACATGTTCTTTaGAGCAAACGGCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHIEHVL*SKRHWV
Trigger: CACCCAATGCCGTTTGCTGCAAAGAACATGTTCTAT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCTCTAAAAGCTCGCTaGAATGTTACTGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSLKAR*NVTAAL
Trigger: CAAAGCTGCAGTAACATTGCAGCGAGCTTTTAGAGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGCAGCCTCTGTAAGCTaGCTGCAAACAAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFAASVS*LQTNSC
Trigger: GCAGCTATTTGTTTGCAGGCAGCTTACAGAGGCTGC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGAGCTGCAGCCCTGTaGATTTCTTGTAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTERAAAL*ISCNFF
Trigger: AAAGAAGTTACAAGAAATGCACAGGGCTGCAGCTCT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGTTAGATATTTCTTGTaGGCTCTCCAACGCCTATAC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEVRYFL*ALQRLY
Trigger: GTATAGGCGTTGGAGAGCGCACAAGAAATATCTAAC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCCTTCTCGCCAGCTGTaGAGAGAGGTAACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFPSRQL*REVTFN
Trigger: ATTGAAGGTTACCTCTCTGCACAGCTGGCGAGAAGG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACGAGTTTTGGCTTTCTaGTCTGAAACCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTERVLAF*SETLFL
Trigger: AAGGAAAAGGGTTTCAGAGCAGAAAGCCAAAACTCG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTATGACTGAATCCATGTaGTTCTTAGCGTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVMTESM*FLAFLK
Trigger: CTTGAGGAACGCTAAGAAGCACATGGATTCAGTCAT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATGACTGAATCCATGTaGTTCTTAGCGTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEMTESM*FLAFLK
Trigger: CTTGAGGAACGCTAAGAAGCACATGGATTCAGTCAT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGTTTGGCAAACTTCATaGACAGTTTGGGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHVWQTS*TVWDSR
Trigger: TCTGGAATCCCAAACTGTCCATGAAGTTTGCCAAAC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTTTCAGATCTGCTGCTaGGAGTCTGTGCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFFQICC*ESVHAD
Trigger: GTCAGCATGCACAGACTCCCAGCAGCAGATCTGAAA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGTGGCAGAAAGAATTaGGCGTCTCTTGTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFSGRKN*ASLVRL
Trigger: CAACCGCACAAGAGACGCCCAATTCTTTCTGCCACT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTCTCCCACTGTTCCGTaGCTCTTTCTTTTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGSPTVP*LFLFRA
Trigger: TGCTCGGAAAAGAAAGAGCCACGGAACAGTGGGAGA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTATCAAATTCATCAAGTaGTGTCTGAACGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVIKFIK*CLNVAH
Trigger: GTGAGCCACGTTCAGACACCACTTGATGAATTTGAT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACATCAAATTCATCAAGTaGTGTCTGAACGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHIKFIK*CLNVAH
Trigger: GTGAGCCACGTTCAGACACCACTTGATGAATTTGAT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCACCGAACTCTTCTCTaGATGACAATAACACAAGAC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHHRTLL*MTITQD
Trigger: GTCTTGTGTTATTGTCATCCAGAGAAGAGTTCGGTG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCAGCTGCTGTAAAGTaGAAAAGCCGAGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIAAAVK*KSRVLA
Trigger: AGCCAAAACTCGGCTTTTCCACTTTACAGCAGCTGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTCCCCTTCACTCTGGTaGCAGACACTAATGGGATTA +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFSPSLW*QTLMGL
Trigger: TAATCCCATTAGTGTCTGTCACCAGAGTGAAGGGGA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAATTTAGCCACCAAGTaGAGCCCTGTTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGINLATK*SPVPAF
Trigger: AAAAGCAGGAACAGGGCTTCACTTGGTGGCTAAATT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCCTTGCACAAAGAAATaGCAAATAGGTGATAACCAC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHPCTKK*QIGDNH
Trigger: GTGGTTATCACCTATTTGTCATTTCTTTGTGCAAGG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACAGACTGTAGAACAATaGCTGAAGACCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEQTVEQ*LKTLFS
Trigger: AGAAAACAAGGTCTTCAGTCATTGTTCTACAGTCTG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGTGTGACTGCAGTTTaGTACAGGATTCACGCACCT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFSVTAV*YRIHAP
Trigger: AGGTGCGTGAATCCTGTATCAAACTGCAGTCACACT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAAATGGCAGTTTTCCTaGGGGAAAGGAACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIKWQFS*GKGTSF
Trigger: GAAGGAAGTTCCTTTCCCTCAGGAAAACTGCCATTT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTTTCGAAACCATCTCTaGATGAAGATGACTGAATCC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVFRNHL*MKMTES
Trigger: GGATTCAGTCATCTTCATTCAGAGATGGTTTCGAAA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATACATCCAGCCTGAATaGGCACTGCTGATTTATTTT +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKYIQPE*ALLIYF
Trigger: AAAATAAATCAGCAGTGCTCATTCAGGCTGGATGTA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAATTCGAGACATCTTTTTaGGTCTGGCTTGTTAATCTC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEFETSF*VWLVNL
Trigger: GAGATTAACAAGCCAGACGCAAAAAGATGTCTCGAA...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACATCCATTCTTCAGCTaGTACTTTTCCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEHPFFS*YFSICI
Trigger: GATGCAAATGGAAAAGTAGCAGCTGAAGAATGGATG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCATCCATTCTTCAGCTaGTACTTTTCCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVHPFFS*YFSICI
Trigger: GATGCAAATGGAAAAGTAGCAGCTGAAGAATGGATG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGTGTCTATATTCAGCTaGTATGTCAGGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVVSIFS*YVRIPK
Trigger: CTTTGGAATCCTGACATAGCAGCTGAATATAGACAC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGAACTTAGACAAGGCTaGTTCATGACCATCCCGAAA +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIELRQG*FMTIPK
Trigger: TTTCGGGATGGTCATGAAGCAGCCTTGTCTAAGTTC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTACACTGCAAGTCCACTaGAAGATTTGTAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVTLQVH*KICNSK
Trigger: TTTGCTGTTACAAATCTTGCAGTGGACTTGCAGTGT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACACTGCAAGTCCACTaGAAGATTTGTAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHTLQVH*KICNSK
Trigger: TTTGCTGTTACAAATCTTGCAGTGGACTTGCAGTGT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCACCTGGAAAGCCAGTaGTATTTTCCAAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFHLESQ*YFPKQP
Trigger: GGGTTGCTTTGGAAAATAGCACTGGCTTTCCAGGTG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCATTGCAACCTCAACTaGTTTCTGACCAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFHCNLN*FLTRHP
Trigger: AGGATGCCTGGTCAGAAAGCAGTTGAGGTTGCAATG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACTGAATGAGTGTTGCTaGGAAATGCATCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKLNECC*EMHLSY
Trigger: GTAAGAAAGATGCATTTCGCAGCAACACTCATTCAG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGCTCGGAATTTCCTCTaGACAAATATAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEARNFL*TNIAAF
Trigger: AAAAGCTGCTATATTTGTGCAGAGGAAATTCCGAGC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGCTGCCTTTCGTAACTaGAAGAATTGGTGCAATTTA +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEAAFRN*KNWCNL
Trigger: TAAATTGCACCAATTCTTGCAGTTACGAAAGGCAGC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTTTTTGTATTACCTTTaGTGCCCACCGACGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIFLYYL*CPPTLL
Trigger: CAACAGCGTCGGTGGGCAGCAAAGGTAATACAAAAA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTAAAACAGCAGATCTCTaGTGCAGGAAGGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGKTADL*CRKDCL
Trigger: AAGGCAGTCCTTCCTGCAGCAGAGATCTGCTGTTTT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCAGGTAGCTTTTCTCTaGCATTGGTGGGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIQVAFL*HWWVSF
Trigger: AAAGGAAACCCACCAATGCCAGAGAAAAGCTACCTG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTCCAGAGGAGAAAAATaGATTCGTTTGACTTCACAC +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSRGEK*IRLTSH
Trigger: GTGTGAAGTCAAACGAATCCATTTTTCTCCTCTGGA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTACAGGAGAGGAACAGTaGGGTGTCTATATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGTGEEQ*GVYIQL
Trigger: CAGCTGAATATAGACACCCCACTGTTCCTCTCCTGT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTCAGAAACCGTTTTCTaGTGGAGTATCTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSETVF*WSIFSN
Trigger: ATTGGAGAAGATACTCCACCAGAAAACGGTTTCTGA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTGGCGAAATGCTTTTCTaGCTTGCATCCCTCTACATG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGGEMLF*LASLYM
Trigger: CATGTAGAGGGATGCAAGCCAGAAAAGCATTTCGCC...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAAGACTGTAGAGAAATaGCAGCTTTACATTGCAACC +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKKTVEK*QLYIAT
Trigger: GGTTGCAATGTAAAGCTGCCATTTCTCTACAGTCTT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCGTAACTGCAAGAATTaGTGCAATTTATGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVRNCKN*CNLCLA
Trigger: TGCCAAGCATAAATTGCACCAATTCTTGCAGTTACG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCATTTACAAGAAATGTaGCAATCTCCCTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFHLQEM*QSPSLP
Trigger: GGGGAGTGAGGGAGATTGTCACATTTCTTGTAAATG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCTTTTTGTATGTTTTaGAGAGGCTGGAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPFCMF*RGWNLL
Trigger: AAGAAGATTCCAGCCTCTTCAAAACATACAAAAAGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATTTATAAAGGTCAAATaGGACTGTGCTACAGCAACA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKFIKVK*DCATAT
Trigger: TGTTGCTGTAGCACAGTCTCATTTGACCTTTATAAA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTTTATAAAGGTCAAATaGGACTGTGCTACAGCAACA +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVFIKVK*DCATAT
Trigger: TGTTGCTGTAGCACAGTCTCATTTGACCTTTATAAA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCCACAGAGGATTATATaGCAAGAGCCAATTCAGGAC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFPQRII*QEPIQD
Trigger: GTCCTGAATTGGCTCTTGTCATATAATCCTCTGTGG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCCACAGAGGATTATATaGCAAGAGCCAATTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGPQRII*QEPIQD
Trigger: GTCCTGAATTGGCTCTTGTCATATAATCCTCTGTGG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCTGGAAATTTTAGCATaGTCAAGGAAACAGATCAAC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVLEILA*SRKQIN
Trigger: GTTGATCTGTTTCCTTGATCATGCTAAAATTTCCAG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAAATTGAGAACAACTaGCTGAATAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEKIENN*LNNSSS
Trigger: GCTGCTAGAGTTATTCAGTCAGTTGTTCTCAATTTT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACTGAATGAGCACTGCTaGTTTATTTTGAAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTELNEHC*FILKFC
Trigger: GCAAAACTTCAAAATAAATCAGCAGTGCTCATTCAG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGACTGAAGGATGACTaGATAGTGCTTCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFRLKDD*IVLQPQ
Trigger: CTGAGGTTGAAGCACTATTCAGTCATCCTTCAGTCT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGATTTTCACAAGGCTaGAGTGGGCTCCTAATTCTG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFRFSQG*SGLLIL
Trigger: CAGAATTAGGAGCCCACTGCAGCCTTGTGAAAATCT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCATCCGCTTTGAGGTATaGCCTTCTTTCTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIIRFEV*PSFFVV
Trigger: AACCACAAAGAAAGAAGGGCATACCTCAAAGCGGAT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTTCCTCTTTAGTAGGTaGTTTCGGGACACTTATTTT +
Preference number: 4 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHFLFSR*FRDTYF
Trigger: AAAATAAGTGTCCCGAAAGCACCTACTAAAGAGGAA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGGGTTTTCTCTCTGTaGCTGTCCACAACATCCTTA +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFRVFSL*LSTTSL
Trigger: TAAGGATGTTGTGGACAGGCACAGAGAGAAAACCCT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATAGAAGGCACAAACTaGATTTACCCAATCCATCAA +
Preference number: 4 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKIEGTN*IYPIHQ
Trigger: TTGATGGATTGGGTAAATGCAGTTTGTGCCTTCTAT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATAGAAGGCACAAACTaGATTTACCCAATCCATCAA +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEIEGTN*IYPIHQ
Trigger: TTGATGGATTGGGTAAATGCAGTTTGTGCCTTCTAT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCATGGCAGCTTTACATTaGAACCTCAACTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIMAALH*NLNCFL
Trigger: CAGAAAGCAGTTGAGGTTGCAATGTAAAGCTGCCAT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGGATTACAGCAGCATaGTTTTGCCTCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFRITAA*FCLCSS
Trigger: AGAACTGCAGAGGCAAAAGCATGCTGCTGTAATCCT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTACTCTGAATAAGGGTTaGAGAAGAATGCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVTLNKG*RRMHSL
Trigger: AAGACTATGCATTCTTCTGCAACCCTTATTCAGAGT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTTTAGATCTACTTTGTaGATCAAAAGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVFRSTL*IKSTLL
Trigger: GAGCAGTGTGCTTTTGATGCACAAAGTAGATCTAAA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACCTACACAGGAATTCTaGTTCTGCTTATCAAACAAT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEPTQEF*FCLSNN
Trigger: ATTGTTTGATAAGCAGAAGCAGAATTCCTGTGTAGG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTTCACAAGGCTGCAGTaGGCTCCTAATTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFFTRLQ*APNSVF
Trigger: AAAGACAGAATTAGGAGCCCACTGCAGCCTTGTGAA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAATAGGACTAATGGATaGGGTGGGGACTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGINRTNG*GGDFVF
Trigger: GAAAACAAAGTCCCCACCCCATCCATTAGTCCTATT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGTGCTACAGCAACAATaGATCTTCTCTTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEVLQQQ*IFSFSL
Trigger: CAAAGAAAAAGAGAAGATCCATTGTTGCTGTAGCAC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACACTTATTTTATGTTaGCTTTCCGCTCCCAAAACA +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTETLILC*LSAPKT
Trigger: TGTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGT...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCAATTCAGGACTTTTTaGCGTTGTCCAATATCTTTC +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVQFRTF*RCPISF
Trigger: GAAAGATATTGGACAACGCCAAAAAGTCCTGAATTG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGCAGATCGCACCAAATaGAAATTTTTCTTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEADRTK*KFFFSF
Trigger: AAACGAGAAGAAAAATTTCCATTTGGTGCGATCTGC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGCAGATCGCACCAAATaGAAATTTTTCTTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVADRTK*KFFFSF
Trigger: AAACGAGAAGAAAAATTTCCATTTGGTGCGATCTGC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCATGTTACTGCAGCTTTaGTTTGTAACTGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIMLLQL*FVTAAC
Trigger: GCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACAT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCATTCTAAACGTAGACTaGATCTTCACTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIILNVD*IFTAAS
Trigger: TGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGAAT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCTCTGTATGATGACTaGATCTTTATAACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPLYDD*IFITAF
Trigger: AAAGGCAGTTATAAAGATCCAGTCATCATACAGAGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTATTCTCACAGCAAAGTaGAGAGAGTCTGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFILTAK*RESGND
Trigger: GTCGTTACCAGACTCTCTCCACTTTGCTGTGAGAAT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACTTCATAGTTCTTTCTaGTATACAAGGAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTELHSSF*YTRKAY
Trigger: GTAGGCTTTCCTTGTATACCAGAAAGAACTATGAAG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTGTACTATTCAAAGGTaGAGAACAGTTTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFCTIQR*RTVWGK
Trigger: CTTGCCCCAAACTGTTCTTCACCTTTGAATAGTACA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTGTACTATTCAAAGGTaGAGAACAGTTTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGCTIQR*RTVWGK
Trigger: CTTGCCCCAAACTGTTCTTCACCTTTGAATAGTACA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTACATTGTGCATCTTTTaGACTCGACTTATTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFTLCIF*TRLIAG
Trigger: CCCTGCAATAAGTCGAGTTCAAAAGATGCACAATGT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTGCTCTGTATCTCACCTaGATTATAAGAGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGALYLT*IIRAAV
Trigger: AACAGCAGCTCTTATAATTCAGGTGAGATACAGAGC...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCTGAATGAAGATGACTaGATCCATGTGCTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLNEDD*IHVLLS
Trigger: GCTAAGAAGCACATGGATTCAGTCATCTTCATTCAG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGTATCCATTACCAGTTaGATAGCTTGCAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFVSITS*IACREF
Trigger: AAACTCCCTGCAAGCTATTCAACTGGTAATGGATAC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGTGTCTATATTCAGCTaGTATGTCAGGATTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIVSIFS*YVRIPK
Trigger: CTTTGGAATCCTGACATAGCAGCTGAATATAGACAC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTTGAACTCGACTTATTaGAGGGATCCTGAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLNSTY*RDPEFV
Trigger: GACAAACTCAGGATCCCTGCAATAAGTCGAGTTCAA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTTGAACTCGACTTATTaGAGGGATCCTGAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFLNSTY*RDPEFV
Trigger: GACAAACTCAGGATCCCTGCAATAAGTCGAGTTCAA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCATTTGTTTCCTGAGATaGCATTCTCTAAAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIICFLR*HSLKAR
Trigger: GCGAGCTTTTAGAGAATGGCATCTCAGGAAACAAAT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAATTTCCAAATGTGAAATaGAACGTAAGTTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEFPNVK*NVSSVH
Trigger: ATGCACAGAACTTACGTTGCATTTCACATTTGGAAA...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGTTAGATATTTCTTGTaGGCTCTCCAACGCCTATAC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFVRYFL*ALQRLY
Trigger: GTATAGGCGTTGGAGAGCGCACAAGAAATATCTAAC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTAATAGGACTAATGGATaGGGTGGGGACTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGNRTNG*GGDFVF
Trigger: GAAAACAAAGTCCCCACCCCATCCATTAGTCCTATT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTGTTTGGCAAACTTCATaGACAGTTTGGGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGVWQTS*TVWDSR
Trigger: TCTGGAATCCCAAACTGTCCATGAAGTTTGCCAAAC...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTCCAGAGGAGAAAAATaGATTCGTTTGACTTCACAC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISRGEK*IRLTSH
Trigger: GTGTGAAGTCAAACGAATCCATTTTTCTCCTCTGGA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTCTGGAGAGTCAGGATaGCATCTTTCCTTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFSGESG*HLSFSY
Trigger: ATAAGAGAAGGAAAGATGCCATCCTGACTCTCCAGA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCTGGAAATTTTAGCATaGTCAAGGAAACAGATCAAC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGILEILA*SRKQIN
Trigger: GTTGATCTGTTTCCTTGATCATGCTAAAATTTCCAG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCCTTGCACAAAGAAATaGCAAATAGGTGATAACCAC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGPCTKK*QIGDNH
Trigger: GTGGTTATCACCTATTTGTCATTTCTTTGTGCAAGG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAAAATTGAGAACAACTaGCTGAATAACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIKIENN*LNNSSS
Trigger: GCTGCTAGAGTTATTCAGTCAGTTGTTCTCAATTTT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCTGAATGAGCACTGCTaGTTTATTTTGAAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGILNEHC*FILKFC
Trigger: GCAAAACTTCAAAATAAATCAGCAGTGCTCATTCAG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTCCAATAAGCCTGAATaGGCACTGCTGATTTATTTT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISNKPE*ALLIYF
Trigger: AAAATAAATCAGCAGTGCTCATTCAGGCTTATTGGA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTCGCTGTTCTCATTCTaGAATAAGACTGTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISLFSF*NKTVEK
Trigger: TTTCTCTACAGTCTTATTTCAGAATGAGAACAGCGA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTTTCGAAACCATCTCTaGATGAAGATGACTGAATCC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGFRNHL*MKMTES
Trigger: GGATTCAGTCATCTTCATTCAGAGATGGTTTCGAAA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCAGGAATTCTGCTTCTaGTTATCAAACAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFQEFCF*LSNNPC
Trigger: ACAGGGATTGTTTGATAAGCAGAAGCAGAATTCCTG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCAGGAATTCTGCTTCTaGTTATCAAACAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGQEFCF*LSNNPC
Trigger: ACAGGGATTGTTTGATAAGCAGAAGCAGAATTCCTG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCTGGAATCTTCTTACTaGTATTCCAAAGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGILESSY*YSKDFS
Trigger: AGAGAAGTCTTTGGAATACCAGTAAGAAGATTCCAG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGACTTTGTTTTCTGTTaGGGAAGAGCATTCACTCAT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFDFVFC*GRAFTH
Trigger: ATGAGTGAATGCTCTTCCCCAACAGAAAACAAAGTC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCAATTCAGGACTTTTTaGCGTTGTCCAATATCTTTC +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIQFRTF*RCPISF
Trigger: GAAAGATATTGGACAACGCCAAAAAGTCCTGAATTG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCTCTTTGTACATTTCTaGAGTACTTTCGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: HKVISKQFTLTVKTAPGILFVHF*STFVIK
Trigger: CTTGATCACGAAAGTACTCCAGAAATGTACAAAGAG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGAAACCGTTTTCTGGTaGAGTATCTTCTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFETVFW*SIFSNK
Trigger: CTTATTGGAGAAGATACTCCACCAGAAAACGGTTTC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR TCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCCTTTTTGTATGTTTTaGAGAGGCTGGAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGPFCMF*RGWNLL
Trigger: AAGAAGATTCCAGCCTCTTCAAAACATACAAAAAGG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR TCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAAGTTAAGGTATTCCTaGTGTTGCTGGGTTGTAATT +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFKLRYS*CCWVVI
Trigger: AATTACAACCCAGCAACATCAGGAATACCTTAACTT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR GCA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTTTAGATCTACTTTGTaGATCAAAAGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFFRSTL*IKSTLL
Trigger: GAGCAGTGTGCTTTTGATGCACAAAGTAGATCTAAA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCTGGAATCTTCTTACTaGTATTCCAAAGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLESSY*YSKDFS
Trigger: AGAGAAGTCTTTGGAATACCAGTAAGAAGATTCCAG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTAAAATCATACGTATGTaGCTTCACTTCTACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGKIIRM*LHFYRV
Trigger: AACCCTGTAGAAGTGAAGCCACATACGTATGATTTT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTACACTTATTTTATGTTaGCTTTCCGCTCCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGTLILC*LSAPKT
Trigger: TGTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCTCTTTGTACATTTCTaGAGTACTTTCGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLFVHF*STFVIK
Trigger: CTTGATCACGAAAGTACTCCAGAAATGTACAAAGAG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCTTCATAGTTCTTTCTaGTATACAAGGAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLHSSF*YTRKAY
Trigger: GTAGGCTTTCCTTGTATACCAGAAAGAACTATGAAG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR GCA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTTAAAGGCTCTAAAATaGTTCTGTGTAATCATAGCG +
Preference number: 4 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLKALK*FCVIIA
Trigger: CGCTATGATTACACAGAAGCATTTTAGAGCCTTTAA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp AGGCTTCAGCTCGCAGCGGTTCGGCGCCACGCTGAAGCCCTGGCCTaGGGCGCGCAGCAGCGACAGCTCCACCTGCAGAGGTTCCTCGTG +
Preference number: 5 (lower is better)
Translates to: RLQLAAVRRHAEALA*GAQQRQLHLQRFLV
Trigger: CACGAGGAACCTCTGCAGGTGGAGCTGTCGCTGCTGCGCGCCGCAGGCCAGGGCTTCAGCGTGGCGCCGAACCGCTGCGAGCTGAAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp CGCAGCAGCGACAGCTCCACCTGCAGAGGTTCCTCGTGCGGGTTGTaGAGGACCAGAGACCGCGTCCGCGACGTGCCCACGCGGACATCC +
Preference number: 5 (lower is better)
Translates to: RSSDSSTCRGSSCGL*RTRDRVRDVPTRTS
Trigger: GGATGTCCGCGTGGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAACCTCTGCAGGTGGAGCTGTCGCTGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp CCCACGCGGACATCCCCGAAGCAGAGGAAGGGAACGCCGCAGAAGTaGCTGAGCAACAGCACCGGCGGAGACGGGTCCCCGGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PTRTSPKQRKGTPQK*LSNSTGGDGSPASG
Trigger: TCCTGAGGCCGGGGACCCGTCTCCGCCGGTGCTGTTGCTCAGCCACTTCTGCGGCGTTCCCTTCCTCTGCTTCGGGGATGTCCGCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp GTTCCTCGTGCGGGTTGTGCAGGACCAGAGACCGCGTCCGCGACGTaGCCACGCGGACATCCCCGAAGCAGAGGAAGGGAACGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: VPRAGCAGPETASAT*PRGHPRSRGRERRR
Trigger: TCTGCGGCGTTCCCTTCCTCTGCTTCGGGGATGTCCGCGTGGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp AGCTGCATGACGGAGCTGGATGTACGCCAAGTGCTGCCTCTTCCCTaGAGCCCGTGCCCTCACATGCTGCTGGATGACTGCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCMTELDVRQVLPLP*SPCPHMLLDDCCSC
Trigger: GCAGCTGCAGCAGTCATCCAGCAGCATGTGAGGGCACGGGCTGCAGGGAAGAGGCAGCACTTGGCGTACATCCAGCTCCGTCATGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp CTGTTGCTGGGCCACGGCCATTCTAAACGTAGACTGGATCTTCACTaGAGCCTCATGTTGCCTCCTGAGCTGTTGCCGAACCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLLGHGHSKRRLDLH*SLMLPPELLPNLPA
Trigger: GGCTGGCAGGTTCGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp TCTTCTGCAGAGGAGAAAGCGGCGTACCGCCTTCTGTATCACGGATaGAGCCCTGTCCTGCTGGAGCCAACATGCATGAGCTTCACGTCG +
Preference number: 5 (lower is better)
Translates to: SSAEEKAAYRLLYHG*SPVLLEPTCMSFTS
Trigger: CGACGTGAAGCTCATGCATGTTGGCTCCAGCAGGACAGGGCTGCATCCGTGATACAGAAGGCGGTACGCCGCTTTCTCCTCTGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp CAGCTCCAATCTGCAACCTGTATGAATGGCGAGCCTTCATCCCCCTaGATGCAGCCTGCAGTCGAATGGTGGCAGCTCGTTTCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: QLQSATCMNGEPSSP*MQPAVEWWQLVSAN
Trigger: ATTTGCAGAAACGAGCTGCCACCATTCGACTGCAGGCTGCATTCAGGGGGATGAAGGCTCGCCATTCATACAGGTTGCAGATTGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp GCAGCCTGGATGAGGAGTACAGAACGCCTTAGTCTGCTGTACCTCTaGAACTCAGCGCTTCCTTCTTTCACTGCTCGGTATCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AAWMRSTERLSLLYL*NSALPSFTARYLCC
Trigger: GCAGCAGAGATACCGAGCAGTGAAAGAAGGAAGCGCTGAGTTTCAGAGGTACAGCAGACTAAGGCGTTCTGTACTCCTCATCCAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp AGCGCTTCCTTCTTTCACTGCTCGGTATCTCTGCTGCACCATGGTTaGCGCCTTCCTCAACCGATGAAAGTAAGTTTGCTGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SASFFHCSVSLLHHG*RLPQPMKVSLLPVS
Trigger: GGACACAGGCAGCAAACTTACTTTCATCGGTTGAGGAAGGCGGCAACCATGGTGCAGCAGAGATACCGAGCAGTGAAAGAAGGAAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp CCAATAGGACTGAAGAACACAGGCAGCTCCAATCTGCAACCTGTATaGATGGCGAGCCTTCATCCCCCTGAATGCAGCCTGCAGTCGAAT +
Preference number: 5 (lower is better)
Translates to: PIGLKNTGSSNLQPV*MASLHPPECSLQSN
Trigger: ATTCGACTGCAGGCTGCATTCAGGGGGATGAAGGCTCGCCATTCATACAGGTTGCAGATTGGAGCTGCCTGTGTTCTTCAGTCCTATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp TGCTCCACTTCCTGCGCTGAATGTGCATCCTGTAATATGACTGTATaGGGGCAGCGCATTGATGCTGCCGGGCAATCTGTCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSTSCAECASCNMTV*GQRIDAAGQSVFSA
Trigger: TGCTGAGAAGACAGATTGCCCGGCAGCATCAATGCGCTGCCCTCATACAGTCATATTACAGGATGCACATTCAGCGCAGGAAGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp TCTACATCCAGCCTGGAAGCCTCTCTCGGCCTCCATCAGCCTCCTTaGTTTAAAGGCTCTAAAATGCTTCTGTGTAATCATAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: STSSLEASLGLHQPP*FKGSKMLLCNHSGP
Trigger: GGGGCCGCTATGATTACACAGAAGCATTTTAGAGCCTTTAAAGCAAGGAGGCTGATGGAGGCCGAGAGAGGCTTCCAGGCTGGATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp ACTCAGCGCTTCCTTCTTTCACTGCTCGGTATCTCTGCTGCACCATaGTTGCCGCCTTCCTCAACCGATGAAAGTAAGTTTGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: TQRFLLSLLGISAAP*LPPSSTDESKFAAC
Trigger: ACAGGCAGCAAACTTACTTTCATCGGTTGAGGAAGGCGGCAACCATGGTGCAGCAGAGATACCGAGCAGTGAAAGAAGGAAGCGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp GATGGTAGATACCGCTCCGCTTTCAGCCATATTCTCACAGCAAAGTaGAGAGAGTCTGGTAACGACCTCCAGGTGCTTCAACGCATCCAG +
Preference number: 5 (lower is better)
Translates to: DGRYRSAFSHILTAK*RESGNDLQVLQRIQ
Trigger: CTGGATGCGTTGAAGCACCTGGAGGTCGTTACCAGACTCTCTCCACTTTGCTGTGAGAATATGGCTGAAAGCGGAGCGGTATCTACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp CTTTTGCCTCTGCAGTTCTGCAGCTGTGTGTACTTGGATCACAACTaGGGCCCGCTTCAAATGCTGGTACCTCATATAGGCTCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: LLPLQFCSCVYLDHN*GPLQMLVPHIGSVH
Trigger: ATGCACGGAGCCTATATGAGGTACCAGCATTTGAAGCGGGCCTCAGTTGTGATCCAAGTACACACAGCTGCAGAACTGCAGAGGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp TTCTGTATCACGGATGCAGCCCTGTCCTGCTGGAGCCAACATGCATaGGCTTCACGTCGAGTGCTTAGGATCTTGTGGTACTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: FCITDAALSCWSQHA*ASRRVLRILWYCSM
Trigger: CATTGAACAGTACCACAAGATCCTAAGCACTCGACGTGAAGCTCATGCATGTTGGCTCCAGCAGGACAGGGCTGCATCCGTGATACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp CACAACATCCTTAGACGAGATAGCGCTCCCATGCTCGTCAGTCAGTaGAACTCCCCGAGACTTGAGAACCTGAAGGACGAGATCAACATT +
Preference number: 5 (lower is better)
Translates to: HNILRRDSAPMLVSQ*NSPRLENLKDEINI
Trigger: AATGTTGATCTCGTCCTTCAGGTTCTCAAGTCTCGGGGAGTTCCACTGACTGACGAGCATGGGAGCGCTATCTCGTCTAAGGATGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp AGTAGTTTATACTGTTGCTGGGCCACGGCCATTCTAAACGTAGACTaGATCTTCACTGCAGCCTCATGTTGCCTCCTGAGCTGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: SSLYCCWATAILNVD*IFTAASCCLLSCCR
Trigger: TCGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAGTATAAACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp TGCTGGATGACTGCTGCAGCTGCTCTTAGTAGTTTATACTGTTGCTaGGCCACGGCCATTCTAAACGTAGACTGGATCTTCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: CWMTAAAALSSLYCC*ATAILNVDWIFTAA
Trigger: GGCTGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAGTATAAACTACTAAGAGCAGCTGCAGCAGTCATCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp GCGATTCAGAATGAACATCGCCAATCCCGTGACGTCACTGTTGTCTaGCAGAGGGATCAGTTCTCCAAAAACTGTCTCCAGACCAATTCG +
Preference number: 5 (lower is better)
Translates to: AIQNEHRQSRDVTVV*QRDQFSKNCLQTNS
Trigger: CGAATTGGTCTGGAGACAGTTTTTGGAGAACTGATCCCTCTGGCAGACAACAGTGACGTCACGGGATTGGCGATGTTCATTCTGAATCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp AAAGCCAGTGCTATTTTCCAAAGCAACCCAAGGGTTTTCTCTCTGTaGCTGTCCACAACATCCTTAGACGAGATAGCGCTCCCATGCTCG +
Preference number: 5 (lower is better)
Translates to: KASAIFQSNPRVFSL*LSTTSLDEIALPCS
Trigger: CGAGCATGGGAGCGCTATCTCGTCTAAGGATGTTGTGGACAGGCACAGAGAGAAAACCCTTGGGTTGCTTTGGAAAATAGCACTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp TGCTGCTGGATGACTGCTGCAGCTGCTCTTAGTAGTTTATACTGTTaGTGGGCCACGGCCATTCTAAACGTAGACTGGATCTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: CCWMTAAAALSSLYC*WATAILNVDWIFTA
Trigger: TGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAGTATAAACTACTAAGAGCAGCTGCAGCAGTCATCCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAACACTGCAGCCTCATGTaGCCTCCTGAGCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEHCSLM*PPELLP
Trigger: CGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTG...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp CTCAGAGCTTTACTCACTCCTGGCTCCACAACGGGAAGAGAAGAATaGAAACCTTTCTCTCTCAGGCTACCCACTTCTTTTCCACGTTCA +
Preference number: 5 (lower is better)
Translates to: LRALLTPGSTTGREE*KPFSLRLPTSFPRS
Trigger: TGAACGTGGAAAAGAAGTGGGTAGCCTGAGAGAGAAAGGTTTTCATTCTTCTCTTCCCGTTGTGGAGCCAGGAGTGAGTAAAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp CCGCCTTGCACATCTTCAGGTAGCGCTGCCTCGCTGTTCTCATTCTaGAATAAGACTGTAGAGAAATGGCAGCTTTACATTGCAACCTCA +
Preference number: 5 (lower is better)
Translates to: PPCTSSGSAASLFSF*NKTVEKWQLYIATS
Trigger: TGAGGTTGCAATGTAAAGCTGCCATTTCTCTACAGTCTTATTTCAGAATGAGAACAGCGAGGCAGCGCTACCTGAAGATGTGCAAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp TGTAAGCCCTATAGCACAGCTGAATCTGAAGGGCAGCGGTTTTCATaGTGCTCCACTTCCTGCGCTGAATGTGCATCCTGTAATATGACT +
Preference number: 5 (lower is better)
Translates to: CKPYSTAESEGQRFS*CSTSCAECASCNMT
Trigger: AGTCATATTACAGGATGCACATTCAGCGCAGGAAGTGGAGCATCATGAAAACCGCTGCCCTTCAGATTCAGCTGTGCTATAGGGCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp ATCTTAAACATGGCTTCAATAAGTGTGGCCGCCATGTGCATGTGTTaGATGCGTCTCCTCACTCTAATGCCTCTATACGCAGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: ILNMASISVAAMCMC*MRLLTLMPLYAAWT
Trigger: AGTCCAGGCTGCGTATAGAGGCATTAGAGTGAGGAGACGCATTCAACACATGCACATGGCGGCCACACTTATTGAAGCCATGTTTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp CCGGCGTACTTTGCAGCCTCTGTAAGCTGCCTGCAAACAAATAGCTaGTCTTTTGACCTGCAAGAAGTTCTTCCTTTGACTGATTTGTGC +
Preference number: 5 (lower is better)
Translates to: PAYFAASVSCLQTNS*SFDLQEVLPLTDLC
Trigger: GCACAAATCAGTCAAAGGAAGAACTTCTTGCAGGTCAAAAGAGCAGCTATTTGTTTGCAGGCAGCTTACAGAGGCTGCAAAGTACGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp AGACTGCTGCTTGATTTGCCGGCGTACTTTGCAGCCTCTGTAAGCTaGCTGCAAACAAATAGCTGCTCTTTTGACCTGCAAGAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: RLLLDLPAYFAASVS*LQTNSCSFDLQEVL
Trigger: AAGAACTTCTTGCAGGTCAAAAGAGCAGCTATTTGTTTGCAGGCAGCTTACAGAGGCTGCAAAGTACGCCGGCAAATCAAGCAGCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTGCCCACCGACGCTGTaGATAGAAGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVCPPTL*IEATLP
Trigger: AGGCAGCGTTGCTTCTATCAACAGCGTCGGTGGGCA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp AGGGAAAGGAACTTCCTTCTCATCGCGAAAGTCCTGAATCTCCTCTaGATGAGAGTAGCAGCCAGGTGCATAGCTTTTAAGTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: RERNFLLIAKVLNLL*MRVAARCIAFKCLL
Trigger: TAGGAGACACTTAAAAGCTATGCACCTGGCTGCTACTCTCATTCAGAGGAGATTCAGGACTTTCGCGATGAGAAGGAAGTTCCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp GCAGCTGGCTGTATAAGCTCTGAGAGACACTTCCTCTTTAGTAGGTaGTTTCGGGACACTTATTTTATGTTGGCTTTCCGCTCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: AAGCISSERHFLFSR*FRDTYFMLAFRSQN
Trigger: GTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGTCCCGAAAGCACCTACTAAAGAGGAAGTGTCTCTCAGAGCTTATACAGCCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp GAGTGTTGCTGCGAAATGCATCTTTCTTACAGTCCGCCTCACTCTTaGTCCTCTGACTCCAGCTTGAAGGGTTTTAATAGCCTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: ECCCEMHLSYSPPHS*SSDSSLKGFNSLQS
Trigger: ACTTTGAAGGCTATTAAAACCCTTCAAGCTGGAGTCAGAGGAGCAAGAGTGAGGCGGACTGTAAGAAAGATGCATTTCGCAGCAACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp TCTGGCATTGGTGGGTTTCCTTTTCGTAACAGTGGCAGAAAGAATTaGGCGTCTCTTGTGCGGTTGTTTACTCTGGTGACAAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: SGIGGFPFRNSGRKN*ASLVRLFTLVTKSI
Trigger: GATGCTTTTTGTCACCAGAGTAAACAACCGCACAAGAGACGCCCAATTCTTTCTGCCACTGTTACGAAAAGGAAACCCACCAATGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp ATATTGATGAATCCATTTTCTTCTTCAGGCCTGACCGCTCCAGGCTaGTTATCCGCTTTGAGGTATGCCCTTCTTTCTTTGTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILMNPFSSSGLTAPG*LSALRYALLSLWFL
Trigger: CAAGAACCACAAAGAAAGAAGGGCATACCTCAAAGCGGATAAGCAGCCTGGAGCGGTCAGGCCTGAAGAAGAAAATGGATTCATCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp TTCTGTGTGAGAAGCTCCACAGTTCGCACAAGGCGAACCCCACACTaGAAGTCCACTGCAAGATTTGTAACAGCAAAATCAAATTCATCA +
Preference number: 5 (lower is better)
Translates to: FCVRSSTVRTRRTPH*KSTARFVTAKSNSS
Trigger: TGATGAATTTGATTTTGCTGTTACAAATCTTGCAGTGGACTTGCAGTGTGGGGTTCGCCTTGTGCGAACTGTGGAGCTTCTCACACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp CTGAAGGACGAGATCAACATTGTGCATCTTTTGAACTCGACTTATTaGAGGGATCCTGAGTTTGTCGGACAGATTCCAGTTCTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: LKDEINIVHLLNSTY*RDPEFVGQIPVLCE
Trigger: CTCACACAGAACTGGAATCTGTCCGACAAACTCAGGATCCCTGCAATAAGTCGAGTTCAAAAGATGCACAATGTTGATCTCGTCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp CTTTCTCGTATTTGTTTCCTGAGATGCCATTCTCTAAAAGCTCGCTaGAATGTTACTGCAGCTTTGGTTTGTAACTGCAGCTTGCGTCGC +
Preference number: 5 (lower is better)
Translates to: LSRICFLRCHSLKAR*NVTAALVCNCSLRR
Trigger: GCGACGCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACATTGCAGCGAGCTTTTAGAGAATGGCATCTCAGGAAACAAATACGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp TGCAACCTCAACTGCTTTCTGACCAGGCATCCTCTAAAGTGTGACTaGAGTTTGATACAGGATTCACGCACCTGTATGTACTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: CNLNCFLTRHPLKCD*SLIQDSRTCMYSFL
Trigger: GAGAAAAGAGTACATACAGGTGCGTGAATCCTGTATCAAACTGCAGTCACACTTTAGAGGATGCCTGGTCAGAAAGCAGTTGAGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp AGCTGCTCTTTTGACCTGCAAGAAGTTCTTCCTTTGACTGATTTGTaGTCTGTAGGCACAGTAGAAACTCTGAATGACAAGAGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: SCSFDLQEVLPLTDL*SVGTVETLNDKSRL
Trigger: AAGGCGGCTCTTGTCATTCAGAGTTTCTACTGTGCCTACAGAGCACAAATCAGTCAAAGGAAGAACTTCTTGCAGGTCAAAAGAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp TCTTACAGAAAGTGTAGCTCTCCATTTCCTTTGAATTATAATAGCTaGCGCCCTCATCTTCAAGAACCTCCTTCTCGCCAGCTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SYRKCSSPFPLNYNS*RPHLQEPPSRQLCR
Trigger: TCTGCACAGCTGGCGAGAAGGAGGTTCTTGAAGATGAGGGCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCTACACTTTCTGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp ATTTACAAGAAATGTGACAATCTCCCTCACTCCCCCTTCTCGCAGTaGCGTCCAGGTAACGGAAATGGTAAGTTTTTCTTTAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: IYKKCDNLPHSPFSQ*RPGNGNGKFFFRLQ
Trigger: CTGAAGCCTAAAGAAAAACTTACCATTTCCGTTACCTGGACGCCACTGCGAGAAGGGGGAGTGAGGGAGATTGTCACATTTCTTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp GACACTTCCTCTTTAGTAGGTGCTTTCGGGACACTTATTTTATGTTaGCTTTCCGCTCCCAAAACAAGGCTGGCAGCGTTCACTTTAGAA +
Preference number: 5 (lower is better)
Translates to: DTSSLVGAFGTLILC*LSAPKTRLAAFTLE
Trigger: TTCTAAAGTGAACGCTGCCAGCCTTGTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGTCCCGAAAGCACCTACTAAAGAGGAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAACAGTGGCAGAAAGAATaGGGCGTCTCTTGTGCGGTT +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKQWQKE*GVSCAV
Trigger: AACCGCACAAGAGACGCCCAATTCTTTCTGCCACTG...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCGCCCTGTGCATCTTTaGCACCCTTTTCCTTACCAC +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHRPVHL*HPFPYH
Trigger: GTGGTAAGGAAAAGGGTGCAAAAGATGCACAGGGCG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTACAGCAGCATGCTTTaGCCTCTGCAGTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHYSSML*PLQFCS
Trigger: GCTGCAGAACTGCAGAGGCAAAAGCATGCTGCTGTA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAACGCCTATACCAAGCTaGAATCCTGCAGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKTPIPS*NPAGSF
Trigger: GAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCGT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGTTCTTCTGTACAGCTaGTTCTCCTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVVLLYS*FSSSTV
Trigger: GACCGTGGAGGAGGAGAACAAGCTGTACAGAAGAAC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp ATACGCCAACCCTTCATTTATTCTCCAATCCTGAGAAGCTTCATTTaGCTTACCCGTTTGCTGACCTACGTGTCCCATGCTATCCTTTAC +
Preference number: 5 (lower is better)
Translates to: IRQPFIYSPILRSFI*LTRLLTYVSHAILY
Trigger: GTAAAGGATAGCATGGGACACGTAGGTCAGCAAACGGGTAAGTCAAATGAAGCTTCTCAGGATTGGAGAATAAATGAAGGGTTGGCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp ATGCTTTTCTGGCTTGCATCCCTCTACATGCAGACTGTAGAACAATaGCTGAAGACCTTGTTTTCTGATAAGATGCTAGAACCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: MLFWLASLYMQTVEQ*LKTLFSDKMLEPSW
Trigger: CCAGGAGGGTTCTAGCATCTTATCAGAAAACAAGGTCTTCAGTCATTGTTCTACAGTCTGCATGTAGAGGGATGCAAGCCAGAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp ACATTGCAACCTCAACTGCTTTCTGACCAGGCATCCTCTAAAGTGTaGCTGCAGTTTGATACAGGATTCACGCACCTGTATGTACTCTTT +
Preference number: 5 (lower is better)
Translates to: TLQPQLLSDQASSKV*LQFDTGFTHLYVLF
Trigger: AAAGAGTACATACAGGTGCGTGAATCCTGTATCAAACTGCAGTCACACTTTAGAGGATGCCTGGTCAGAAAGCAGTTGAGGTTGCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp ATTATAAGAGCTGCTGTTCTCATCTTGAGGTACCTTACTCTTGACTaGCGCATCTTAAACATGGCTTCAATAAGTGTGGCCGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: IIRAAVLILRYLTLD*RILNMASISVAAMC
Trigger: GCACATGGCGGCCACACTTATTGAAGCCATGTTTAAGATGCGTCAGTCAAGAGTAAGGTACCTCAAGATGAGAACAGCAGCTCTTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp TTCTCACGAGCTCCTCTTACAGAAAGTGTAGCTCTCCATTTCCTTTaGATTATAATAGCTGCCGCCCTCATCTTCAAGAACCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FSRAPLTESVALHFL*IIIAAALIFKNLLL
Trigger: GAGAAGGAGGTTCTTGAAGATGAGGGCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCTACACTTTCTGTAAGAGGAGCTCGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp TCTCTAAAAGCTCGCTGCAATGTTACTGCAGCTTTGGTTTGTAACTaGAGCTTGCGTCGCTTCCACCTTCTGAACATAAACTGGATTACA +
Preference number: 5 (lower is better)
Translates to: SLKARCNVTAALVCN*SLRRFHLLNINWIT
Trigger: TGTAATCCAGTTTATGTTCAGAAGGTGGAAGCGACGCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACATTGCAGCGAGCTTTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp CTTTTGTGTTCTGTAGGCTCTAAATTTAGACTGTATAGTGACCGCTaGTTTGTGGCATTCAGCTACCCGCTTTCTCACTTTCATACCACG +
Preference number: 5 (lower is better)
Translates to: LLCSVGSKFRLYSDR*FVAFSYPLSHFHTT
Trigger: CGTGGTATGAAAGTGAGAAAGCGGGTAGCTGAATGCCACAAAGCAGCGGTCACTATACAGTCTAAATTTAGAGCCTACAGAACACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp GTGGTTCTTGCAACAGTTGAGGGTGTAGATTCCAGAGGAGAAAAATaGATTCGTTTGACTTCACACATGTCCATCCATTCTTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VVLATVEGVDSRGEK*IRLTSHMSIHSSAA
Trigger: AGCAGCTGAAGAATGGATGGACATGTGTGAAGTCAAACGAATCCATTTTTCTCCTCTGGAATCTACACCCTCAACTGTTGCAAGAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGGCTGCTTATCCGCTTaGAGGTATGCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHGCLSA*RYALLS
Trigger: AGAAAGAAGGGCATACCTCAAAGCGGATAAGCAGCC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGGCTGCTTATCCGCTTaGAGGTATGCCCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKGCLSA*RYALLS
Trigger: AGAAAGAAGGGCATACCTCAAAGCGGATAAGCAGCC...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp CTGAATTATAAGAGCTGCTGTTCTCATCTTGAGGTACCTTACTCTTaGCTGACGCATCTTAAACATGGCTTCAATAAGTGTGGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: LNYKSCCSHLEVPYS*LTHLKHGFNKCGRH
Trigger: ATGGCGGCCACACTTATTGAAGCCATGTTTAAGATGCGTCAGTCAAGAGTAAGGTACCTCAAGATGAGAACAGCAGCTCTTATAATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp ACAGCCGCGATCGTCTTATCATACTTTGCCACATTCAGCAATACTTaGACAGCATATCCAACGACTTCCATACAAGGAACACTCCGATTA +
Preference number: 5 (lower is better)
Translates to: TAAIVLSYFATFSNT*TAYPTTSIQGTLRL
Trigger: TAATCGGAGTGTTCCTTGTATGGAAGTCGTTGGATATGCTGTTCAAGTATTGCTGAATGTGGCAAAGTATGATAAGACGATCGCGGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp GACTGTATCACAACAGCGGATCTTTCTCGTATTTGTTTCCTGAGATaGCATTCTCTAAAAGCTCGCTGCAATGTTACTGCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: DCITTADLSRICFLR*HSLKARCNVTAALV
Trigger: AACCAAAGCTGCAGTAACATTGCAGCGAGCTTTTAGAGAATGGCATCTCAGGAAACAAATACGAGAAAGATCCGCTGTTGTGATACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp ACTTTGGATAAGTATTTCTTAGCTTTATATTTTCTACATCCAGCCTaGAAGCCTCTCTCGGCCTCCATCAGCCTCCTTGCTTTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TLDKYFLALYFLHPA*KPLSASISLLALKA
Trigger: AGCCTTTAAAGCAAGGAGGCTGATGGAGGCCGAGAGAGGCTTCCAGGCTGGATGTAGAAAATATAAAGCTAAGAAATACTTATCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCAGGGATCCTGAGTTaGTCGGACAGATTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIAGILS*SDRFQF
Trigger: GAACTGGAATCTGTCCGACAAACTCAGGATCCCTGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTGGAAAAGCCGAGTTTaGGCTTTCTGCTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHWKSRV*AFCSET
Trigger: GGTTTCAGAGCAGAAAGCCAAAACTCGGCTTTTCCA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp TTCTCGTTTTCTAGAAGCTCTTTGTACATTTCTGGAGTACTTTCGTaGTCAAGCGCTTCAAGAGACAGATCCAGACAACCTCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: FSFSRSSLYISGVLS*SSASRDRSRQPPSD
Trigger: ATCTGAAGGAGGTTGTCTGGATCTGTCTCTTGAAGCGCTTGATCACGAAAGTACTCCAGAAATGTACAAAGAGCTTCTAGAAAACGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp AAAGTTAGATATTTCTTGTGCGCTCTCCAACGCCTATACCAAGCTTaGATCCTGCAGGCAGCTTCCACTTTGGATAAGTATTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: KVRYFLCALQRLYQA*ILQAASTLDKYFLA
Trigger: AGCTAAGAAATACTTATCCAAAGTGGAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCGTTGGAGAGCGCACAAGAAATATCTAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp ATCTTTATAACGGATGCTAAAGCATGGCGAAATGCTTTTCTGGCTTaGATCCCTCTACATGCAGACTGTAGAACAATGACTGAAGACCTT +
Preference number: 5 (lower is better)
Translates to: IFITDAKAWRNAFLA*IPLHADCRTMTEDL
Trigger: AAGGTCTTCAGTCATTGTTCTACAGTCTGCATGTAGAGGGATGCAAGCCAGAAAAGCATTTCGCCATGCTTTAGCATCCGTTATAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 90 bp AAAGAATCTGGGCTTAAGATTGTTTGGCAAACTTCATGGACAGTTTaGGATTCCAGACATACAGACTCTGCGGGATCTTTCCTAAATGTG +
Preference number: 5 (lower is better)
Translates to: KESGLKIVWQTSWTV*DSRHTDSAGSFLNV
Trigger: CACATTTAGGAAAGATCCCGCAGAGTCTGTATGTCTGGAATCCCAAACTGTCCATGAAGTTTGCCAAACAATCTTAAGCCCAGATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCAGTGGCAGAAAGAATaGGGCGTCTCTTGTGCGGTT +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFQWQKE*GVSCAV
Trigger: AACCGCACAAGAGACGCCCAATTCTTTCTGCCACTG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAGCTTTTCTCTGGCATaGGTGGGTTTCCTTTTCGTA +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSFSLA*VGFLFV
Trigger: TACGAAAAGGAAACCCACCAATGCCAGAGAAAAGCT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCGCCATGTGCATGTGTaGAATGCGTCTCCTCACTCT +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGRHVHV*NASPHS
Trigger: AGAGTGAGGAGACGCATTCAACACATGCACATGGCG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCTCTGACTCCAGCTaGAAGGGTTTTAATAGCCTT +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVSSDSS*KGFNSL
Trigger: AAGGCTATTAAAACCCTTCAAGCTGGAGTCAGAGGA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTACGCCTATACCAAGCTaGAATCCTGCAGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGTPIPS*NPAGSF
Trigger: GAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCGT...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCGAGTGCTTAGGATCTaGTGGTACTGTTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVRVLRI*WYCSMN
Trigger: GTTCATTGAACAGTACCACAAGATCCTAAGCACTCG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp TCCAAAAACTGTCTCCAGACCAATTCGAAGCCACAGAGGATTATATaGCAAGAGCCAATTCAGGACTTTTTGGCGTTGTCCAATATCTTT +
Preference number: 5 (lower is better)
Translates to: SKNCLQTNSKPQRII*QEPIQDFLALSNIF
Trigger: AAAGATATTGGACAACGCCAAAAAGTCCTGAATTGGCTCTTGTCATATAATCCTCTGTGGCTTCGAATTGGTCTGGAGACAGTTTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 90 bp ATAGCAGGTATTCCTCCCAGATCCCTAGCTGCAGATCGCACCAAATaGAAATTTTTCTTCTCGTTTTCTAGAAGCTCTTTGTACATTTCT +
Preference number: 5 (lower is better)
Translates to: IAGIPPRSLAADRTK*KFFFSFSRSSLYIS
Trigger: AGAAATGTACAAAGAGCTTCTAGAAAACGAGAAGAAAAATTTCCATTTGGTGCGATCTGCAGCTAGGGATCTGGGAGGAATACCTGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTATGCCCTTCTTTCTTaGTGGTTCTTGCAACAGTTG +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVYALLS*WFLQQL
Trigger: CAACTGTTGCAAGAACCACAAAGAAAGAAGGGCATA...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACAGCTCTTTGCTAGCCTaGAATTCAGCATCTTTACAG +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSSLLA*NSASLQ
Trigger: CTGTAAAGATGCTGAATTCAAGGCTAGCAAAGAGCT...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTAGCTCTTTGCTAGCCTaGAATTCAGCATCTTTACAG +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVSSLLA*NSASLQ
Trigger: CTGTAAAGATGCTGAATTCAAGGCTAGCAAAGAGCT...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAGGATCTTTCTCGTATTaGTTTCCTGAGATGCCATTC +
Preference number: 5 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTEGSFSY*FPEMPF
Trigger: GAATGGCATCTCAGGAAACAAATACGAGAAAGATCC...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACGACAGCAGCACTGTGTaGTTCTTCTCTGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHDSSTV*FFSDKF
Trigger: AAACTTATCAGAGAAGAACAACACAGTGCTGCTGTC...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCTGCCGACCTTGTTTaGCAGTGTTTAAACCCTGAA +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIAADLV*QCLNPE
Trigger: TTCAGGGTTTAAACACTGCAAAACAAGGTCGGCAGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCTGGAAAAGCCGAGTTTaGGCTTTCTGCTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIWKSRV*AFCSET
Trigger: GGTTTCAGAGCAGAAAGCCAAAACTCGGCTTTTCCA...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAATGTATCCATTACCAGTaGAATAGCTTGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: KTAPGIHDWHNSFLSHTECIHYQ*NSLQGV
Trigger: AACTCCCTGCAAGCTATTCAACTGGTAATGGATACA...TTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp AGACACTGTAAAATTCTCCACCTTTTTATTATAGAAGGCACAAACTaGATTTACCCAATCCATCAACAACTGCACACTGTCACCATAGCG +
Preference number: 5 (lower is better)
Translates to: RHCKILHLFIIEGTN*IYPIHQQLHTVTIA
Trigger: CGCTATGGTGACAGTGTGCAGTTGTTGATGGATTGGGTAAATGCAGTTTGTGCCTTCTATAATAAAAAGGTGGAGAATTTTACAGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAATCTGGGCTTAAGATaGTTTGGCAAACTTCATGGA +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKNLGLR*FGKLHG
Trigger: TCCATGAAGTTTGCCAAACAATCTTAAGCCCAGATT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCCTGAGAAGCTTCATTaGACTTACCCGTTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGPEKLH*TYPFAD
Trigger: GTCAGCAAACGGGTAAGTCAAATGAAGCTTCTCAGG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAGCTTTTCTCTGGCATaGGTGGGTTTCCTTTTCGTA +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISFSLA*VGFLFV
Trigger: TACGAAAAGGAAACCCACCAATGCCAGAGAAAAGCT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGAAAAATGGATTCGTTaGACTTCACACATGTCCATC +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVEKWIR*TSHMSI
Trigger: GATGGACATGTGTGAAGTCAAACGAATCCATTTTTC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAGAAAAATGGATTCGTTaGACTTCACACATGTCCATC +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKEKWIR*TSHMSI
Trigger: GATGGACATGTGTGAAGTCAAACGAATCCATTTTTC...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCATAGAACATGTTCTTaGCAGCAAACGGCATTGGGT +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIHRTCS*QQTALG
Trigger: ACCCAATGCCGTTTGCTGCAAAGAACATGTTCTATG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCGCTAGAAGAAGCTCTTaGCTAGCCTTGAATTCAGCA +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIARRSS*LALNSA
Trigger: TGCTGAATTCAAGGCTAGCAAAGAGCTTCTTCTAGC...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAAACATTGTGCATCTTTaGAACTCGACTTATTGCAGG +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKNIVHL*NSTYCR
Trigger: CCTGCAATAAGTCGAGTTCAAAAGATGCACAATGTT...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTGGAGATCCAAAAGCCTaGCACAAAGAAATGACAAAT +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVGDPKA*HKEMTN
Trigger: ATTTGTCATTTCTTTGTGCAAGGCTTTTGGATCTCC...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAAATGCTTTTCTGGCTaGCATCCCTCTACATGCAGA +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIKCFSG*HPSTCR
Trigger: TCTGCATGTAGAGGGATGCAAGCCAGAAAAGCATTT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTGCTCTGTATGTTTTTaGTATTACCTTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHCSVCF*YYLCCP
Trigger: TGGGCAGCAAAGGTAATACAAAAAACATACAGAGCA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTACCAGTTGAATAGCTaGCAGGGAGTTTGTAATTTC +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHYQLNS*QGVCNF
Trigger: GAAATTACAAACTCCCTGCAAGCTATTCAACTGGTA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp GGGTGTCTAGGAATAGCTGCTTTTAATGGCTTTATAAAGGTCAAATaGGACTGTGCTACAGCAACAATGGATCTTCTCTTTTTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GCLGIAAFNGFIKVK*DCATATMDLLFFFV
Trigger: GACAAAGAAAAAGAGAAGATCCATTGTTGCTGTAGCACAGTCTCATTTGACCTTTATAAAGCCATTAAAAGCAGCTATTCCTAGACACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp AGATGTAAGAGCAATTTTCATTCTTATCCTAGACTGAAGGATGACTaGATAGTGCTTCAACCTCAGAAACCGTTTTCTGGTGGAGTATCT +
Preference number: 5 (lower is better)
Translates to: RCKSNFHSYPRLKDD*IVLQPQKPFSGGVS
Trigger: AGATACTCCACCAGAAAACGGTTTCTGAGGTTGAAGCACTATTCAGTCATCCTTCAGTCTAGGATAAGAATGAAAATTGCTCTTACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 90 bp TGTTCAATGAACCTCTTTCGTTGTAATCTTTTTCGAAACCATCTCTaGATGAAGATGACTGAATCCATGTGCTTCTTAGCGTTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: CSMNLFRCNLFRNHL*MKMTESMCFLAFLK
Trigger: CTTGAGGAACGCTAAGAAGCACATGGATTCAGTCATCTTCATTCAGAGATGGTTTCGAAAAAGATTACAACGAAAGAGGTTCATTGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 90 bp TACCACCGCTGGATAAACAGTGCAGCTGCTCTTATTTGTAAATACTaGTTCCGTGATTGTTTCATTTTGACAATTGACTGCAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: YHRWINSAAALICKY*FRDCFILTIDCSFI
Trigger: AATAAAGCTGCAGTCAATTGTCAAAATGAAACAATCACGGAAGCAGTATTTACAAATAAGAGCAGCTGCACTGTTTATCCAGCGGTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp ACAACAACCGTAGACTTTTTCAATTTGATATACTTTATCCTTTCCTaGTTCGCAGCCACCATGGCTCGTACATGTCTCTGTATGATTAAA +
Preference number: 5 (lower is better)
Translates to: TTTVDFFNLIYFILS*FAATMARTCLCMIK
Trigger: TTTAATCATACAGAGACATGTACGAGCCATGGTGGCTGCGAAGCAGGAAAGGATAAAGTATATCAAATTGAAAAAGTCTACGGTTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCCTTTTTGTATGTTTaGAAGAGGCTGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSFLYV*KRLESS
Trigger: AGAAGATTCCAGCCTCTTCAAAACATACAAAAAGGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTCCTTTTTGTATGTTTaGAAGAGGCTGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSFLYV*KRLESS
Trigger: AGAAGATTCCAGCCTCTTCAAAACATACAAAAAGGA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCATAGAACATGTTCTTaGCAGCAAACGGCATTGGGT +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGHRTCS*QQTALG
Trigger: ACCCAATGCCGTTTGCTGCAAAGAACATGTTCTATG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTGCTAGAAGAAGCTCTTaGCTAGCCTTGAATTCAGCA +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGARRSS*LALNSA
Trigger: TGCTGAATTCAAGGCTAGCAAAGAGCTTCTTCTAGC...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTCCTTTTCGTCTGGAATaGTATTTGACATGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: APGIHDWHNSFLSHTENVPFRLE*YLTCLN
Trigger: ATTCAGACATGTCAAATACAATTCCAGACGAAAAGG...AACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCCTTTTCGTCTGGAATaGTATTTGACATGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHPFRLE*YLTCLN
Trigger: ATTCAGACATGTCAAATACAATTCCAGACGAAAAGG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACCGTGATTGTTTCATTTaGACAATTGACTGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHRDCFI*TIDCSF
Trigger: AAAGCTGCAGTCAATTGTCAAAATGAAACAATCACG...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAATGGCAGCTTTACATaGCAACCTCAACTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGINGSFT*QPQLLS
Trigger: AGAAAGCAGTTGAGGTTGCAATGTAAAGCTGCCATT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCTTCCTTTGACTGATTaGTGCTCTGTAGGCACAGTA +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFLPLTD*CSVGTV
Trigger: TACTGTGCCTACAGAGCACAAATCAGTCAAAGGAAG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCCAAATAGCTGCTCTTTaGACCTGCAAGAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGIQIAAL*TCKKFF
Trigger: GAAGAACTTCTTGCAGGTCAAAAGAGCAGCTATTTG...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAGCTCTCCATTTCCTTaGAATTATAATAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGISSPFP*NYNSCR
Trigger: GCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCGAGTGCTTAGGATCTaGTGGTACTGTTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFRVLRI*WYCSMN
Trigger: GTTCATTGAACAGTACCACAAGATCCTAAGCACTCG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp ACAGTAAAAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACTCGTCTTATCATACTTaGCCACATTCAGCAATACTT +
Preference number: 5 (lower is better)
Translates to: TVKTAPGIHDWHNSFLSHSSYHT*PHSAIL
Trigger: AAGTATTGCTGAATGTGGCAAAGTATGATAAGACGA...GTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp AAACTGCTCCAGGTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAATCGTCTTATCATACTTaGCCACATTCAGCAATACTT +
Preference number: 5 (lower is better)
Translates to: KLLQVSMIGIIPFCPTLKSSYHT*PHSAIL
Trigger: AAGTATTGCTGAATGTGGCAAAGTATGATAAGACGA...TTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATACCTGGAGCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 90 bp GGTTGTAATTTTAATATTCCGGTACCACCTCTGAATTACAATAGCTaGAGTTCTATAGGTCGTGTACTTCTTTTGTGTTCTGTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GCNFNIPVPPLNYNS*SSIGRVLLLCSVGS
Trigger: AGAGCCTACAGAACACAAAAGAAGTACACGACCTATAGAACTTCAGCTATTGTAATTCAGAGGTGGTACCGGAATATTAAAATTACAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 90 bp TTTTTCTTCTTAGGCTCTTCTGCATTTCCTAGTAATATAGCCTGGTaGTTCAGGAAATCATTTACAAGAAATGTGACAATCTCCCTCACT +
Preference number: 5 (lower is better)
Translates to: FFFLGSSAFPSNIAW*FRKSFTRNVTISLT
Trigger: AGTGAGGGAGATTGTCACATTTCTTGTAAATGATTTCCTGAAGCACCAGGCTATATTACTAGGAAATGCAGAAGAGCCTAAGAAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTATGCCCTTCTTTCTTaGTGGTTCTTGCAACAGTTG +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFYALLS*WFLQQL
Trigger: CAACTGTTGCAAGAACCACAAAGAAAGAAGGGCATA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp CACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTATCAACATTGTGCATCTTTaGAACTCGACTTATTGCAGG +
Preference number: 5 (lower is better)
Translates to: HKVISKQFTLTVKTAPGINIVHL*NSTYCR
Trigger: CCTGCAATAAGTCGAGTTCAAAAGATGCACAATGTT...GATACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAGCTCTCCATTTCCTTaGAATTATAATAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFSSPFP*NYNSCR
Trigger: GCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTCACATTCAGCAATACTaGAACAGCATATCCAACGAC +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGHIQQY*NSISND
Trigger: GTCGTTGGATATGCTGTTCAAGTATTGCTGAATGTG...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTGTATCCATTACCAGTaGAATAGCTTGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGCIHYQ*NSLQGV
Trigger: AACTCCCTGCAAGCTATTCAACTGGTAATGGATACA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTAATCTGGGCTTAAGATaGTTTGGCAAACTTCATGGA +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFNLGLR*FGKLHG
Trigger: TCCATGAAGTTTGCCAAACAATCTTAAGCCCAGATT...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTGGAGATCCAAAAGCCTaGCACAAAGAAATGACAAAT +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFGDPKA*HKEMTN
Trigger: ATTTGTCATTTCTTTGTGCAAGGCTTTTGGATCTCC...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTCAAGAAGTTCTTCCTTaGACTGATTTGTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFQEVLP*TDLCSV
Trigger: TACAGAGCACAAATCAGTCAAAGGAAGAACTTCTTG...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS-3UTR CAA 90 bp GTATCCATGATTGGCATAATTCCTTTTTGTCCCACACTGAAAATGTTTCCATTTTACCAGTTGAATAGCTaGCAGGGAGTTTGTAATTTC +
Preference number: 5 (lower is better)
Translates to: VSMIGIIPFCPTLKMFPFYQLNS*QGVCNF
Trigger: GAAATTACAAACTCCCTGCAAGCTATTCAACTGGTA...AAATGGAAACATTTTCAGTGTGGGACAAAAAGGAATTATGCCAATCATGGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS-3UTR CAA 90 bp TTACACAAAGTCATATCTAAACAGTTTACACTGACAGTAAAAACTGCTCCAGGTTTACTACAGCTGCTTTaGTTTTCAAGTATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LHKVISKQFTLTVKTAPGLLQLL*FSSISG
Trigger: GCCACTTATACTTGAAAACAAAAGCAGCTGTAGTAA...ACCTGGAGCAGTTTTTACTGTCAGTGTAAACTGTTTAGATATGACTTTGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp GCGCGCAGCAGCGACAGCTCCACCTGCAGAGGTTCCTCGTGCGGGTaGTGCAGGACCAGAGACCGCGTCCGCGACGTGCCCACGCGGACA +
Preference number: 6 (lower is better)
Translates to: ARSSDSSTCRGSSCG*CRTRDRVRDVPTRT
Trigger: TGTCCGCGTGGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAACCTCTGCAGGTGGAGCTGTCGCTGCTGCGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GCGGGTTGTGCAGGACCAGAGACCGCGTCCGCGACGTaGCCACGCGGACATCCCCGAAGCAGAGGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: AGCAGPETASAT*PRGHPRSRGRE
Trigger: TTCCCTTCCTCTGCTTCGGGGATGTCCGCGTGGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GACAGCTCCACCTGCAGAGGTTCCTCGTGCGGGTTGTaGAGGACCAGAGACCGCGTCCGCGACGTGCCCACG +
Preference number: 6 (lower is better)
Translates to: DSSTCRGSSCGL*RTRDRVRDVPT
Trigger: CGTGGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAACCTCTGCAGGTGGAGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp CGCAGCAGCGACAGCTCCACCTGCAGAGGTTCCTCGTaGGGGTTGTGCAGGACCAGAGACCGCGTCCGCGAC +
Preference number: 6 (lower is better)
Translates to: RSSDSSTCRGSS*GLCRTRDRVRD
Trigger: GTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAACCTCTGCAGGTGGAGCTGTCGCTGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp AGCGACAGCTCCACCTGCAGAGGTTCCTCGTGCGGGTaGTGCAGGACCAGAGACCGCGTCCGCGACGTGCCC +
Preference number: 6 (lower is better)
Translates to: SDSSTCRGSSCG*CRTRDRVRDVP
Trigger: GGGCACGTCGCGGACGCGGTCTCTGGTCCTGCACAACCCGCACGAGGAACCTCTGCAGGTGGAGCTGTCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GATGTACGCCAAGTGCTGCCTCTTCCCTGCAGCCCGTaGCCTCACATGCTGCTGGATGACTGCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DVRQVLPLPCSP*PHMLLDDCCSC
Trigger: GCAGCTGCAGCAGTCATCCAGCAGCATGTGAGGGCACGGGCTGCAGGGAAGAGGCAGCACTTGGCGTACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp CACGGCCATTCTAAACGTAGACTGGATCTTCACTGCAGCCTCATGTaGCCTCCTGAGCTGTTGCCGAACCTGCCAGCCACGGTAGGCAGA +
Preference number: 6 (lower is better)
Translates to: HGHSKRRLDLHCSLM*PPELLPNLPATVGR
Trigger: TCTGCCTACCGTGGCTGGCAGGTTCGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp AATACCACTGAACCAGTCTGTGCGCAGGCCACGGACTaGCTGGTGCGCTGGCATATAGCATCGAAAGGCACA +
Preference number: 6 (lower is better)
Translates to: NTTEPVCAQATD*LVRWHIASKGT
Trigger: TGTGCCTTTCGATGCTATATGCCAGCGCACCAGTCAGTCCGTGGCCTGCGCACAGACTGGTTCAGTGGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TCTGCAACCTGTATGAATGGCGAGCCTTCATCCCCCTaGATGCAGCCTGCAGTCGAATGGTGGCAGCTCGTT +
Preference number: 6 (lower is better)
Translates to: SATCMNGEPSSP*MQPAVEWWQLV
Trigger: AACGAGCTGCCACCATTCGACTGCAGGCTGCATTCAGGGGGATGAAGGCTCGCCATTCATACAGGTTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp ACGGATGCAGCCCTGTCCTGCTGGAGCCAACATGCATaGGCTTCACGTCGAGTGCTTAGGATCTTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: TDAALSCWSQHA*ASRRVLRILWY
Trigger: GTACCACAAGATCCTAAGCACTCGACGTGAAGCTCATGCATGTTGGCTCCAGCAGGACAGGGCTGCATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GGCCACGGCCATTCTAAACGTAGACTGGATCTTCACTaGAGCCTCATGTTGCCTCCTGAGCTGTTGCCGAAC +
Preference number: 6 (lower is better)
Translates to: GHGHSKRRLDLH*SLMLPPELLPN
Trigger: GTTCGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGAATGGCCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp CATCTTTCCCTTCCATGCAGCCTGAAACACCAGAGCTaGATGACGGAGCTGGATGTACGCCAAGTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: HLSLPCSLKHQS*MTELDVRQVLP
Trigger: AGGCAGCACTTGGCGTACATCCAGCTCCGTCATGCAGCTCTGGTGTTTCAGGCTGCATGGAAGGGAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp TCTAAACGTAGACTGGATCTTCACTGCAGCCTCATGTaGCCTCCTGAGCTGTTGCCGAACCTGCCAGCCACG +
Preference number: 6 (lower is better)
Translates to: SKRRLDLHCSLM*PPELLPNLPAT
Trigger: CGTGGCTGGCAGGTTCGGCAACAGCTCAGGAGGCAACATGAGGCTGCAGTGAAGATCCAGTCTACGTTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp CTGAAGAACACAGGCAGCTCCAATCTGCAACCTGTATaGATGGCGAGCCTTCATCCCCCTGAATGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LKNTGSSNLQPV*MASLHPPECSL
Trigger: CAGGCTGCATTCAGGGGGATGAAGGCTCGCCATTCATACAGGTTGCAGATTGGAGCTGCCTGTGTTCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp AGAACACAGGCAGCTCCAATCTGCAACCTGTATGAATaGCGAGCCTTCATCCCCCTGAATGCAGCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: RTQAAPICNLYE*RAFIPLNAACS
Trigger: ACTGCAGGCTGCATTCAGGGGGATGAAGGCTCGCCATTCATACAGGTTGCAGATTGGAGCTGCCTGTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp CAGCGCTTCCTTCTTTCACTGCTCGGTATCTCTGCTGCACCATGGTaGCCGCCTTCCTCAACCGATGAAAGTAAGTTTGCTGCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: QRFLLSLLGISAAPW*PPSSTDESKFAACV
Trigger: GACACAGGCAGCAAACTTACTTTCATCGGTTGAGGAAGGCGGCAACCATGGTGCAGCAGAGATACCGAGCAGTGAAAGAAGGAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp AAGTGTCTCCTAGTTCTCAGTCCCCTGAAGGCAGCCTaGATGAGGAGTACAGAACGCCTTAGTCTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: KCLLVLSPLKAA*MRSTERLSLLY
Trigger: GTACAGCAGACTAAGGCGTTCTGTACTCCTCATCCAGGCTGCCTTCAGGGGACTGAGAACTAGGAGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp CTGAATTGTAACAGCAGCCGTAGACTGCTGCTTGATTaGCCGGCGTACTTTGCAGCCTCTGTAAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LNCNSSRRLLLD*PAYFAASVSCL
Trigger: CAGGCAGCTTACAGAGGCTGCAAAGTACGCCGGCAAATCAAGCAGCAGTCTACGGCTGCTGTTACAATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TCCCATGCTCGTCAGTCAGTGGAACTCCCCGAGACTTaGGAACCTGAAGGACGAGATCAACATTGTGCATCT +
Preference number: 6 (lower is better)
Translates to: SHARQSVELPET*EPEGRDQHCAS
Trigger: AGATGCACAATGTTGATCTCGTCCTTCAGGTTCTCAAGTCTCGGGGAGTTCCACTGACTGACGAGCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp CTGCAGTTCTGCAGCTGTGTGTACTTGGATCACAACTaGGGCCCGCTTCAAATGCTGGTACCTCATATAGGC +
Preference number: 6 (lower is better)
Translates to: LQFCSCVYLDHN*GPLQMLVPHIG
Trigger: GCCTATATGAGGTACCAGCATTTGAAGCGGGCCTCAGTTGTGATCCAAGTACACACAGCTGCAGAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp CCTGACCGCTCCAGGCTGCTTATCCGCTTTGAGGTATaGCCTTCTTTCTTTGTGGTTCTTGCAACAGTTGAG +
Preference number: 6 (lower is better)
Translates to: PDRSRLLIRFEV*PSFFVVLATVE
Trigger: CTCAACTGTTGCAAGAACCACAAAGAAAGAAGGGCATACCTCAAAGCGGATAAGCAGCCTGGAGCGGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GCCTCCATCAGCCTCCTTGCTTTAAAGGCTCTAAAATaGTTCTGTGTAATCATAGCGGCCCCATGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASISLLALKALK*FCVIIAAPCCC
Trigger: GCAGCAGCATGGGGCCGCTATGATTACACAGAAGCATTTTAGAGCCTTTAAAGCAAGGAGGCTGATGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp TGCTTTTGCCTCTGCAGTTCTGCAGCTGTGTGTACTTaGATCACAACTGAGGCCCGCTTCAAATGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: CFCLCSSAAVCT*ITTEARFKCWY
Trigger: GTACCAGCATTTGAAGCGGGCCTCAGTTGTGATCCAAGTACACACAGCTGCAGAACTGCAGAGGCAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp TACCGCTCCGCTTTCAGCCATATTCTCACAGCAAAGTaGAGAGAGTCTGGTAACGACCTCCAGGTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: YRSAFSHILTAK*RESGNDLQVLQ
Trigger: TTGAAGCACCTGGAGGTCGTTACCAGACTCTCTCCACTTTGCTGTGAGAATATGGCTGAAAGCGGAGCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TATAGCACAGCTGAATCTGAAGGGCAGCGGTTTTCATaGTGCTCCACTTCCTGCGCTGAATGTGCATCCTGT +
Preference number: 6 (lower is better)
Translates to: YSTAESEGQRFS*CSTSCAECASC
Trigger: ACAGGATGCACATTCAGCGCAGGAAGTGGAGCATCATGAAAACCGCTGCCCTTCAGATTCAGCTGTGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp ACAGTCCGCCTCACTCTTGCTCCTCTGACTCCAGCTTaGAGGGTTTTAATAGCCTTCAAAGTCCTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: TVRLTLAPLTPA*RVLIAFKVLRY
Trigger: GTACCTGAGGACTTTGAAGGCTATTAAAACCCTTCAAGCTGGAGTCAGAGGAGCAAGAGTGAGGCGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp AATGAACATCGCCAATCCCGTGACGTCACTGTTGTCTaGCAGAGGGATCAGTTCTCCAAAAACTGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: NEHRQSRDVTVV*QRDQFSKNCLQ
Trigger: CTGGAGACAGTTTTTGGAGAACTGATCCCTCTGGCAGACAACAGTGACGTCACGGGATTGGCGATGTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp CATGGCTTCAATAAGTGTGGCCGCCATGTGCATGTGTaGAATGCGTCTCCTCACTCTAATGCCTCTATACGC +
Preference number: 6 (lower is better)
Translates to: HGFNKCGRHVHV*NASPHSNASIR
Trigger: GCGTATAGAGGCATTAGAGTGAGGAGACGCATTCAACACATGCACATGGCGGCCACACTTATTGAAGCCATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp AGTAAGCGATTCAGAATGAACATCGCCAATCCCGTGACGTCACTGTaGTCTGCCAGAGGGATCAGTTCTCCAAAAACTGTCTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: SKRFRMNIANPVTSL*SARGISSPKTVSRP
Trigger: TGGTCTGGAGACAGTTTTTGGAGAACTGATCCCTCTGGCAGACAACAGTGACGTCACGGGATTGGCGATGTTCATTCTGAATCGCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp CATCTTAAACATGGCTTCAATAAGTGTGGCCGCCATGTGCATGTGTaGAATGCGTCTCCTCACTCTAATGCCTCTATACGCAGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: HLKHGFNKCGRHVHV*NASPHSNASIRSLD
Trigger: GTCCAGGCTGCGTATAGAGGCATTAGAGTGAGGAGACGCATTCAACACATGCACATGGCGGCCACACTTATTGAAGCCATGTTTAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TGTTTTTCAGATCTGCTGCTGGGAGTCTGTGCATGCTaGCACTCGGGGGTATACGCCAACCCTTCATTTATT +
Preference number: 6 (lower is better)
Translates to: CFSDLLLGVCAC*HSGVYANPSFI
Trigger: AATAAATGAAGGGTTGGCGTATACCCCCGAGTGTCAGCATGCACAGACTCCCAGCAGCAGATCTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp ATGGCTTCAATAAGTGTGGCCGCCATGTGCATGTGTTaGATGCGTCTCCTCACTCTAATGCCTCTATACGCA +
Preference number: 6 (lower is better)
Translates to: MASISVAAMCMC*MRLLTLMPLYA
Trigger: TGCGTATAGAGGCATTAGAGTGAGGAGACGCATTCAACACATGCACATGGCGGCCACACTTATTGAAGCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp ATGAGGAGTACAGAACGCCTTAGTCTGCTGTACCTCTaGAACTCAGCGCTTCCTTCTTTCACTGCTCGGTAT +
Preference number: 6 (lower is better)
Translates to: MRSTERLSLLYL*NSALPSFTARY
Trigger: ATACCGAGCAGTGAAAGAAGGAAGCGCTGAGTTTCAGAGGTACAGCAGACTAAGGCGTTCTGTACTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp CACGGTACTGTCTCTGAATCCAAATGGCAGTTTTCCTaGGGGAAAGGAACTTCCTTCTCATCGCGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: HGTVSESKWQFS*GKGTSFSSRKS
Trigger: GGACTTTCGCGATGAGAAGGAAGTTCCTTTCCCTCAGGAAAACTGCCATTTGGATTCAGAGACAGTACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp AATCCATTTTCTTCTTCAGGCCTGACCGCTCCAGGCTaGTTATCCGCTTTGAGGTATGCCCTTCTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: NPFSSSGLTAPG*LSALRYALLSL
Trigger: CAAAGAAAGAAGGGCATACCTCAAAGCGGATAAGCAGCCTGGAGCGGTCAGGCCTGAAGAAGAAAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GCTCGCTGCAATGTTACTGCAGCTTTGGTTTGTAACTaGAGCTTGCGTCGCTTCCACCTTCTGAACATAAAC +
Preference number: 6 (lower is better)
Translates to: ARCNVTAALVCN*SLRRFHLLNIN
Trigger: GTTTATGTTCAGAAGGTGGAAGCGACGCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACATTGCAGCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp ATGACTGCTGCAGCTGCTCTTAGTAGTTTATACTGTTaGTGGGCCACGGCCATTCTAAACGTAGACTGGATC +
Preference number: 6 (lower is better)
Translates to: MTAAAALSSLYC*WATAILNVDWI
Trigger: GATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAGTATAAACTACTAAGAGCAGCTGCAGCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp GACTCGCGTAAAAACAGTGGCAAGCAAGTTTCACTCTaGCATTCTCTAATAGGACTAATGGATGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: DSRKNSGKQVSL*HSLIGLMDGVG
Trigger: CCCCACCCCATCCATTAGTCCTATTAGAGAATGCCAGAGTGAAACTTGCTTGCCACTGTTTTTACGCGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp GGTGGGTTTCCTTTTCGTAACAGTGGCAGAAAGAATTaGGCGTCTCTTGTGCGGTTGTTTACTCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: GGFPFRNSGRKN*ASLVRLFTLVT
Trigger: TGTCACCAGAGTAAACAACCGCACAAGAGACGCCCAATTCTTTCTGCCACTGTTACGAAAAGGAAACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp ACTGCTGCAGCTGCTCTTAGTAGTTTATACTGTTGCTaGGCCACGGCCATTCTAAACGTAGACTGGATCTTC +
Preference number: 6 (lower is better)
Translates to: TAAAALSSLYCC*ATAILNVDWIF
Trigger: GAAGATCCAGTCTACGTTTAGAATGGCCGTGGCCCAGCAACAGTATAAACTACTAAGAGCAGCTGCAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp TTCAGAATGAACATCGCCAATCCCGTGACGTCACTGTaGTCTGCCAGAGGGATCAGTTCTCCAAAAACTGTC +
Preference number: 6 (lower is better)
Translates to: FRMNIANPVTSL*SARGISSPKTV
Trigger: GACAGTTTTTGGAGAACTGATCCCTCTGGCAGACAACAGTGACGTCACGGGATTGGCGATGTTCATTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp TACAGTCCGCCTCACTCTTGCTCCTCTGACTCCAGCTaGAAGGGTTTTAATAGCCTTCAAAGTCCTCAGGTA +
Preference number: 6 (lower is better)
Translates to: YSPPHSCSSDSS*KGFNSLQSPQV
Trigger: TACCTGAGGACTTTGAAGGCTATTAAAACCCTTCAAGCTGGAGTCAGAGGAGCAAGAGTGAGGCGGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp AAAAACCCTCTGAATTGTAACAGCAGCCGTAGACTGCTGCTTGATTaGCCGGCGTACTTTGCAGCCTCTGTAAGCTGCCTGCAAACAAAT +
Preference number: 6 (lower is better)
Translates to: KNPLNCNSSRRLLLD*PAYFAASVSCLQTN
Trigger: ATTTGTTTGCAGGCAGCTTACAGAGGCTGCAAAGTACGCCGGCAAATCAAGCAGCAGTCTACGGCTGCTGTTACAATTCAGAGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 90 bp CTGAGATGCCATTCTCTAAAAGCTCGCTGCAATGTTACTGCAGCTTaGGTTTGTAACTGCAGCTTGCGTCGCTTCCACCTTCTGAACATA +
Preference number: 6 (lower is better)
Translates to: LRCHSLKARCNVTAA*VCNCSLRRFHLLNI
Trigger: TATGTTCAGAAGGTGGAAGCGACGCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACATTGCAGCGAGCTTTTAGAGAATGGCATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TACTATTCAAAGGTGAAGAACAGTTTGGGGCAAGCGTaGGTTTCCTATCCCCTTCACTCTGGTGACAGACAC +
Preference number: 6 (lower is better)
Translates to: YYSKVKNSLGQA*VSYPLHSGDRH
Trigger: GTGTCTGTCACCAGAGTGAAGGGGATAGGAAACTCACGCTTGCCCCAAACTGTTCTTCACCTTTGAATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp CCTCAACTGCTTTCTGACCAGGCATCCTCTAAAGTGTaGCTGCAGTTTGATACAGGATTCACGCACCTGTAT +
Preference number: 6 (lower is better)
Translates to: PQLLSDQASSKV*LQFDTGFTHLY
Trigger: ATACAGGTGCGTGAATCCTGTATCAAACTGCAGTCACACTTTAGAGGATGCCTGGTCAGAAAGCAGTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TCTTCAACAGCACTGCTAACAAACAGCAAGTTCTTGTaGAAATGCTGGCACTCTTCTCAGCGACTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: SSTALLTNSKFL*KCWHSSQRLGL
Trigger: GAGACCGAGTCGCTGAGAAGAGTGCCAGCATTTTCACAAGAACTTGCTGTTTGTTAGCAGTGCTGTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp CGCCCTCATCTTCAAGAACCTCCTTCTCGCCAGCTGTaGAGAGAGGTAACCTTCAATAATGTTAACAGCTTT +
Preference number: 6 (lower is better)
Translates to: RPHLQEPPSRQL*REVTFNNVNSF
Trigger: AAAGCTGTTAACATTATTGAAGGTTACCTCTCTGCACAGCTGGCGAGAAGGAGGTTCTTGAAGATGAGGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp AAATGTGACAATCTCCCTCACTCCCCCTTCTCGCAGTaGCGTCCAGGTAACGGAAATGGTAAGTTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: KCDNLPHSPFSQ*RPGNGNGKFFF
Trigger: AAAGAAAAACTTACCATTTCCGTTACCTGGACGCCACTGCGAGAAGGGGGAGTGAGGGAGATTGTCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp CTCTTTAGTAGGTGCTTTCGGGACACTTATTTTATGTaGGCTTTCCGCTCCCAAAACAAGGCTGGCAGCGTT +
Preference number: 6 (lower is better)
Translates to: LFSRCFRDTYFM*AFRSQNKAGSV
Trigger: AACGCTGCCAGCCTTGTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGTCCCGAAAGCACCTACTAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp CGGCCTCGTACACAGCCGCGATCGTCTTATCATACTTaGCCACATTCAGCAATACTTGAACAGCATATCCAA +
Preference number: 6 (lower is better)
Translates to: RPRTQPRSSYHT*PHSAILEQHIQ
Trigger: TTGGATATGCTGTTCAAGTATTGCTGAATGTGGCAAAGTATGATAAGACGATCGCGGCTGTGTACGAGGCCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp AGACACTTCCTCTTTAGTAGGTGCTTTCGGGACACTTATTTTATGTaGGCTTTCCGCTCCCAAAACAAGGCTGGCAGCGTTCACTTTAGA +
Preference number: 6 (lower is better)
Translates to: RHFLFSRCFRDTYFM*AFRSQNKAGSVHFR
Trigger: TCTAAAGTGAACGCTGCCAGCCTTGTTTTGGGAGCGGAAAGCCAACATAAAATAAGTGTCCCGAAAGCACCTACTAAAGAGGAAGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp CCGAGACTTGAGAACCTGAAGGACGAGATCAACATTGTGCATCTTTaGAACTCGACTTATTGCAGGGATCCTGAGTTTGTCGGACAGATT +
Preference number: 6 (lower is better)
Translates to: PRLENLKDEINIVHL*NSTYCRDPEFVGQI
Trigger: AATCTGTCCGACAAACTCAGGATCCCTGCAATAAGTCGAGTTCAAAAGATGCACAATGTTGATCTCGTCCTTCAGGTTCTCAAGTCTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp AAAGCTCGCTGCAATGTTACTGCAGCTTTGGTTTGTAACTGCAGCTaGCGTCGCTTCCACCTTCTGAACATAAACTGGATTACAAGGGAT +
Preference number: 6 (lower is better)
Translates to: KARCNVTAALVCNCS*RRFHLLNINWITRD
Trigger: ATCCCTTGTAATCCAGTTTATGTTCAGAAGGTGGAAGCGACGCAAGCTGCAGTTACAAACCAAAGCTGCAGTAACATTGCAGCGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp CCCTTCATTTATTCTCCAATCCTGAGAAGCTTCATTTaGCTTACCCGTTTGCTGACCTACGTGTCCCATGCT +
Preference number: 6 (lower is better)
Translates to: PFIYSPILRSFI*LTRLLTYVSHA
Trigger: AGCATGGGACACGTAGGTCAGCAAACGGGTAAGTCAAATGAAGCTTCTCAGGATTGGAGAATAAATGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TTACTCACTCCTGGCTCCACAACGGGAAGAGAAGAATaGAAACCTTTCTCTCTCAGGCTACCCACTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LLTPGSTTGREE*KPFSLRLPTSF
Trigger: AAAAGAAGTGGGTAGCCTGAGAGAGAAAGGTTTTCATTCTTCTCTTCCCGTTGTGGAGCCAGGAGTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TGTCTCCAGACCAATTCGAAGCCACAGAGGATTATATaGCAAGAGCCAATTCAGGACTTTTTGGCGTTGTCC +
Preference number: 6 (lower is better)
Translates to: CLQTNSKPQRII*QEPIQDFLALS
Trigger: GGACAACGCCAAAAAGTCCTGAATTGGCTCTTGTCATATAATCCTCTGTGGCTTCGAATTGGTCTGGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TTTTTCATTTTTCAGCATCCGCAACTTCCTTTGCGCTaGGACTCTTCGCCAGCATTTCTGAATGACCAGAGC +
Preference number: 6 (lower is better)
Translates to: FFIFQHPQLPLR*DSSPAFLNDQS
Trigger: GCTCTGGTCATTCAGAAATGCTGGCGAAGAGTCTCAGCGCAAAGGAAGTTGCGGATGCTGAAAAATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp AACTTCCTTCTCATCGCGAAAGTCCTGAATCTCCTCTaGATGAGAGTAGCAGCCAGGTGCATAGCTTTTAAG +
Preference number: 6 (lower is better)
Translates to: NFLLIAKVLNLL*MRVAARCIAFK
Trigger: CTTAAAAGCTATGCACCTGGCTGCTACTCTCATTCAGAGGAGATTCAGGACTTTCGCGATGAGAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TATTTCTTGTGCGCTCTCCAACGCCTATACCAAGCTTaGATCCTGCAGGCAGCTTCCACTTTGGATAAGTAT +
Preference number: 6 (lower is better)
Translates to: YFLCALQRLYQA*ILQAASTLDKY
Trigger: ATACTTATCCAAAGTGGAAGCTGCCTGCAGGATTCAAGCTTGGTATAGGCGTTGGAGAGCGCACAAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp CATTTGACTTACCCGTTTGCTGACCTACGTGTCCCATaGTATCCTTTACAAATTGTGTTGGCGACAAAACGG +
Preference number: 6 (lower is better)
Translates to: HLTYPFADLRVP*YPLQIVLATKR
Trigger: CCGTTTTGTCGCCAACACAATTTGTAAAGGATAGCATGGGACACGTAGGTCAGCAAACGGGTAAGTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp ACGGATGCTAAAGCATGGCGAAATGCTTTTCTGGCTTaGATCCCTCTACATGCAGACTGTAGAACAATGACT +
Preference number: 6 (lower is better)
Translates to: TDAKAWRNAFLA*IPLHADCRTMT
Trigger: AGTCATTGTTCTACAGTCTGCATGTAGAGGGATGCAAGCCAGAAAAGCATTTCGCCATGCTTTAGCATCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp AACTGCTTTCTGACCAGGCATCCTCTAAAGTGTGACTaGAGTTTGATACAGGATTCACGCACCTGTATGTAC +
Preference number: 6 (lower is better)
Translates to: NCFLTRHPLKCD*SLIQDSRTCMY
Trigger: GTACATACAGGTGCGTGAATCCTGTATCAAACTGCAGTCACACTTTAGAGGATGCCTGGTCAGAAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp TGTAGAGAAATGGCAGCTTTACATTGCAACCTCAACTaGTTTCTGACCAGGCATCCTCTAAAGTGTGACTGC +
Preference number: 6 (lower is better)
Translates to: CREMAALHCNLN*FLTRHPLKCDC
Trigger: GCAGTCACACTTTAGAGGATGCCTGGTCAGAAAGCAGTTGAGGTTGCAATGTAAAGCTGCCATTTCTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp GTTGATAGAAGCAACGCTGCCTGTACATCCTGTACGTaGTTTGTATTAGGACAGCAGCACTGTGTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: VDRSNAACTSCT*FVLGQQHCVVL
Trigger: AAGAACAACACAGTGCTGCTGTCCTAATACAAAGCACGTACAGGATGTACAGGCAGCGTTGCTTCTATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp AAGTGTAGCTCTCCATTTCCTTTGAATTATAATAGCTaGCGCCCTCATCTTCAAGAACCTCCTTCTCGCCAG +
Preference number: 6 (lower is better)
Translates to: KCSSPFPLNYNS*RPHLQEPPSRQ
Trigger: CTGGCGAGAAGGAGGTTCTTGAAGATGAGGGCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCTACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp GGGCTTAAGATTGTTTGGCAAACTTCATGGACAGTTTaGGATTCCAGACATACAGACTCTGCGGGATCTTTC +
Preference number: 6 (lower is better)
Translates to: GLKIVWQTSWTV*DSRHTDSAGSF
Trigger: GAAAGATCCCGCAGAGTCTGTATGTCTGGAATCCCAAACTGTCCATGAAGTTTGCCAAACAATCTTAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp TACTTCATCCCTGTAGCTCAGAGCTTTACTCACTCCTaGCTCCACAACGGGAAGAGAAGAATGAAAACCTTT +
Preference number: 6 (lower is better)
Translates to: YFIPVAQSFTHS*LHNGKRRMKTF
Trigger: AAAGGTTTTCATTCTTCTCTTCCCGTTGTGGAGCCAGGAGTGAGTAAAGCTCTGAGCTACAGGGATGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp AAGTATTTCTTAGCTTTATATTTTCTACATCCAGCCTaGAAGCCTCTCTCGGCCTCCATCAGCCTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: KYFLALYFLHPA*KPLSASISLLA
Trigger: AGCAAGGAGGCTGATGGAGGCCGAGAGAGGCTTCCAGGCTGGATGTAGAAAATATAAAGCTAAGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp ACCCTTCATTTATTCTCCAATCCTGAGAAGCTTCATTaGACTTACCCGTTTGCTGACCTACGTGTCCCATGC +
Preference number: 6 (lower is better)
Translates to: TLHLFSNPEKLH*TYPFADLRVPC
Trigger: GCATGGGACACGTAGGTCAGCAAACGGGTAAGTCAAATGAAGCTTCTCAGGATTGGAGAATAAATGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp AACAGTGGCAGAAAGAATTGGGCGTCTCTTGTGCGGTaGTTTACTCTGGTGACAAAAAGCATCCTGAAACTC +
Preference number: 6 (lower is better)
Translates to: NSGRKNWASLVR*FTLVTKSILKL
Trigger: GAGTTTCAGGATGCTTTTTGTCACCAGAGTAAACAACCGCACAAGAGACGCCCAATTCTTTCTGCCACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp CACAGCCGCGATCGTCTTATCATACTTTGCCACATTCAGCAATACTaGAACAGCATATCCAACGACTTCCATACAAGGAACACTCCGATT +
Preference number: 6 (lower is better)
Translates to: HSRDRLIILCHIQQY*NSISNDFHTRNTPI
Trigger: AATCGGAGTGTTCCTTGTATGGAAGTCGTTGGATATGCTGTTCAAGTATTGCTGAATGTGGCAAAGTATGATAAGACGATCGCGGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp GGTATGCCCTTCTTTCTTTGTGGTTCTTGCAACAGTTaGGGGTGTAGATTCCAGAGGAGAAAAATGGATTCG +
Preference number: 6 (lower is better)
Translates to: GMPFFLCGSCNS*GCRFQRRKMDS
Trigger: CGAATCCATTTTTCTCCTCTGGAATCTACACCCTCAACTGTTGCAAGAACCACAAAGAAAGAAGGGCATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp TTTGCAGCCTCTGTAAGCTGCCTGCAAACAAATAGCTaGTCTTTTGACCTGCAAGAAGTTCTTCCTTTGACT +
Preference number: 6 (lower is better)
Translates to: FAASVSCLQTNS*SFDLQEVLPLT
Trigger: AGTCAAAGGAAGAACTTCTTGCAGGTCAAAAGAGCAGCTATTTGTTTGCAGGCAGCTTACAGAGGCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp TTTTGTGAGGCCAGTTTTTGGGAACGGTACCACCGCTaGATAAACAGTGCAGCTGCTCTTATTTGTAAATAC +
Preference number: 6 (lower is better)
Translates to: FCEASFWERYHR*INSAAALICKY
Trigger: GTATTTACAAATAAGAGCAGCTGCACTGTTTATCCAGCGGTGGTACCGTTCCCAAAAACTGGCCTCACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp CCTTTCGTAACTGCAAGAATTGGTGCAATTTATGCTTaGCATAAAGGGTGGCTCGGAATTTCCTCTGCACAA +
Preference number: 6 (lower is better)
Translates to: PFVTARIGAIYA*HKGWLGISSAQ
Trigger: TTGTGCAGAGGAAATTCCGAGCCACCCTTTATGCCAAGCATAAATTGCACCAATTCTTGCAGTTACGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp GAGGGTGTAGATTCCAGAGGAGAAAAATGGATTCGTTaGACTTCACACATGTCCATCCATTCTTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: EGVDSRGEKWIR*TSHMSIHSSAA
Trigger: AGCAGCTGAAGAATGGATGGACATGTGTGAAGTCAAACGAATCCATTTTTCTCCTCTGGAATCTACACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp TATACGCCAACCCTTCATTTATTCTCCAATCCTGAGAAGCTTCATTaGACTTACCCGTTTGCTGACCTACGTGTCCCATGCTATCCTTTA +
Preference number: 6 (lower is better)
Translates to: YTPTLHLFSNPEKLH*TYPFADLRVPCYPL
Trigger: TAAAGGATAGCATGGGACACGTAGGTCAGCAAACGGGTAAGTCAAATGAAGCTTCTCAGGATTGGAGAATAAATGAAGGGTTGGCGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp TTGCTTTGTAAAATCATACGTATGTGGCTTCACTTCTACAGGGTTTaGTTTTTCAGATCTGCTGCTGGGAGTCTGTGCATGCTGACACTC +
Preference number: 6 (lower is better)
Translates to: LLCKIIRMWLHFYRV*FFRSAAGSLCMLTL
Trigger: GAGTGTCAGCATGCACAGACTCCCAGCAGCAGATCTGAAAAACAAAACCCTGTAGAAGTGAAGCCACATACGTATGATTTTACAAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp CCTTTTCGTAACAGTGGCAGAAAGAATTGGGCGTCTCTTGTGCGGTaGTTTACTCTGGTGACAAAAAGCATCCTGAAACTCAGAAATCTT +
Preference number: 6 (lower is better)
Translates to: PFRNSGRKNWASLVR*FTLVTKSILKLRNL
Trigger: AAGATTTCTGAGTTTCAGGATGCTTTTTGTCACCAGAGTAAACAACCGCACAAGAGACGCCCAATTCTTTCTGCCACTGTTACGAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp ATTCTCACGAGCTCCTCTTACAGAAAGTGTAGCTCTCCATTTCCTTaGAATTATAATAGCTGCCGCCCTCATCTTCAAGAACCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ILTSSSYRKCSSPFP*NYNSCRPHLQEPPS
Trigger: AGAAGGAGGTTCTTGAAGATGAGGGCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCTACACTTTCTGTAAGAGGAGCTCGTGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp AGTCATCAGGTGTTAATATATAATTTAGCCACCAAGTaGAGCCCTGTTCCTGCTTTTCCTTCCAGCGTTCGT +
Preference number: 6 (lower is better)
Translates to: SHQVLIYNLATK*SPVPAFPSSVR
Trigger: ACGAACGCTGGAAGGAAAAGCAGGAACAGGGCTTCACTTGGTGGCTAAATTATATATTAACACCTGATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp TTTGTAACAGCAAAATCAAATTCATCAAGTGGTGTCTaGACGTGGCTCACAGGTAACCCCAAGAAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: FVTAKSNSSSGV*TWLTGNPKKLR
Trigger: CCTTAGCTTCTTGGGGTTACCTGTGAGCCACGTTCAGACACCACTTGATGAATTTGATTTTGCTGTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp TGTATAAGCTCTGAGAGACACTTCCTCTTTAGTAGGTaGTTTCGGGACACTTATTTTATGTTGGCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: CISSERHFLFSR*FRDTYFMLAFR
Trigger: GCGGAAAGCCAACATAAAATAAGTGTCCCGAAAGCACCTACTAAAGAGGAAGTGTCTCTCAGAGCTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GAGATCAACATTGTGCATCTTTTGAACTCGACTTATTaGAGGGATCCTGAGTTTGTCGGACAGATTCCAGTT +
Preference number: 6 (lower is better)
Translates to: EINIVHLLNSTY*RDPEFVGQIPV
Trigger: AACTGGAATCTGTCCGACAAACTCAGGATCCCTGCAATAAGTCGAGTTCAAAAGATGCACAATGTTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp ATGAATCATAGCAGGTATTCCTCCCAGATCCCTAGCTaGAGATCGCACCAAATGGAAATTTTTCTTCTCGTT +
Preference number: 6 (lower is better)
Translates to: MNHSRYSSQIPS*RSHQMEIFLLV
Trigger: AACGAGAAGAAAAATTTCCATTTGGTGCGATCTGCAGCTAGGGATCTGGGAGGAATACCTGCTATGATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp ACAACAGCGGATCTTTCTCGTATTTGTTTCCTGAGATaGCATTCTCTAAAAGCTCGCTGCAATGTTACTGCA +
Preference number: 6 (lower is better)
Translates to: TTADLSRICFLR*HSLKARCNVTA
Trigger: TGCAGTAACATTGCAGCGAGCTTTTAGAGAATGGCATCTCAGGAAACAAATACGAGAAAGATCCGCTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CCA 72 bp AGAGGATTATATGACAAGAGCCAATTCAGGACTTTTTaGCGTTGTCCAATATCTTTCCAGAGGTGTCGGTCT +
Preference number: 6 (lower is better)
Translates to: RGLYDKSQFRTF*RCPISFQRCRS
Trigger: AGACCGACACCTCTGGAAAGATATTGGACAACGCCAAAAAGTCCTGAATTGGCTCTTGTCATATAATCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp AAGACCTTGTTTTCTGATAAGATGCTAGAACCCTCCTaGCTGAAATGGAAGCTCGGAAATGAGTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: KTLFSDKMLEPS*LKWKLGNESEL
Trigger: CAATTCAGACTCATTTCCGAGCTTCCATTTCAGCCAGGAGGGTTCTAGCATCTTATCAGAAAACAAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp AAAATCATACGTATGTGGCTTCACTTCTACAGGGTTTaGTTTTTCAGATCTGCTGCTGGGAGTCTGTGCATG +
Preference number: 6 (lower is better)
Translates to: KIIRMWLHFYRV*FFRSAAGSLCM
Trigger: CATGCACAGACTCCCAGCAGCAGATCTGAAAAACAAAACCCTGTAGAAGTGAAGCCACATACGTATGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp TCCCGTGAAAAGGCTAGAAGAAGCTCTTTGCTAGCCTaGAATTCAGCATCTTTACAGAAGAGACAAGGATCA +
Preference number: 6 (lower is better)
Translates to: SREKARRSSLLA*NSASLQKRQGS
Trigger: TGATCCTTGTCTCTTCTGTAAAGATGCTGAATTCAAGGCTAGCAAAGAGCTTCTTCTAGCCTTTTCACGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp CTGAGGAAATCCCGTGAAAAGGCTAGAAGAAGCTCTTaGCTAGCCTTGAATTCAGCATCTTTACAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: LRKSREKARRSS*LALNSASLQKR
Trigger: TCTCTTCTGTAAAGATGCTGAATTCAAGGCTAGCAAAGAGCTTCTTCTAGCCTTTTCACGGGATTTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp TTTCTGACCAGGCATCCTCTAAAGTGTGACTGCAGTTaGATACAGGATTCACGCACCTGTATGTACTCTTTT +
Preference number: 6 (lower is better)
Translates to: FLTRHPLKCDCS*IQDSRTCMYSF
Trigger: AAAAGAGTACATACAGGTGCGTGAATCCTGTATCAAACTGCAGTCACACTTTAGAGGATGCCTGGTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp CACGTCGAGTGCTTAGGATCTTGTGGTACTGTTCAATaGACCTCTTTCGTTGTAATCTTTTTCGAAACCATC +
Preference number: 6 (lower is better)
Translates to: HVECLGSCGTVQ*TSFVVIFFETI
Trigger: GATGGTTTCGAAAAAGATTACAACGAAAGAGGTTCATTGAACAGTACCACAAGATCCTAAGCACTCGACGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp GAAGAGCATTCACTCATAGCCAGATTTTCACAAGGCTaGAGTGGGCTCCTAATTCTGTCTTTTTGTGAAATA +
Preference number: 6 (lower is better)
Translates to: EEHSLIARFSQG*SGLLILSFCEI
Trigger: TATTTCACAAAAAGACAGAATTAGGAGCCCACTGCAGCCTTGTGAAAATCTGGCTATGAGTGAATGCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp GTGTATTTTCAGATTCATGAAGAGATGAATAGGCAGTaGACTCGCGTAAAAACAGTGGCAAGCAAGTTTCAC +
Preference number: 6 (lower is better)
Translates to: VYFQIHEEMNRQ*TRVKTVASKFH
Trigger: GTGAAACTTGCTTGCCACTGTTTTTACGCGAGTCCACTGCCTATTCATCTCTTCATGAATCTGAAAATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CCA 72 bp ACCCTTTTCCTTACCACCCATCCTCTGTATGATGACTaGATCTTTATAACTGCCTTTTCCAACAGTAACTGT +
Preference number: 6 (lower is better)
Translates to: TLFLTTHPLYDD*IFITAFSNSNC
Trigger: ACAGTTACTGTTGGAAAAGGCAGTTATAAAGATCCAGTCATCATACAGAGGATGGGTGGTAAGGAAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp AGCTCCTCTTACAGAAAGTGTAGCTCTCCATTTCCTTaGAATTATAATAGCTGCCGCCCTCATCTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: SSSYRKCSSPFP*NYNSCRPHLQE
Trigger: TTCTTGAAGATGAGGGCGGCAGCTATTATAATTCAAAGGAAATGGAGAGCTACACTTTCTGTAAGAGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp ACTCTGGTGACAAAAAGCATCCTGAAACTCAGAAATCTTGGGCTTTaGCTTTGTAAAATCATACGTATGTGGCTTCACTTCTACAGGGTT +
Preference number: 6 (lower is better)
Translates to: TLVTKSILKLRNLGL*LCKIIRMWLHFYRV
Trigger: AACCCTGTAGAAGTGAAGCCACATACGTATGATTTTACAAAGCAAAAGCCCAAGATTTCTGAGTTTCAGGATGCTTTTTGTCACCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp AATGTATTTCTGCAATTCCCTGTGCATTCTGTACCATaGCTGTATCACAACAGCGGATCTTTCTCGTATTTG +
Preference number: 6 (lower is better)
Translates to: NVFLQFPVHSVP*LYHNSGSFSYL
Trigger: CAAATACGAGAAAGATCCGCTGTTGTGATACAGTCATGGTACAGAATGCACAGGGAATTGCAGAAATACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp CACGGTAAGCTGACTGTAAAGTTACTACAGCTGCTTTaGTTTTCAAGTATAAGTGGCGCTGTTCTTTTCCAA +
Preference number: 6 (lower is better)
Translates to: HGKLTVKLLQLL*FSSISGAVLFQ
Trigger: TTGGAAAAGAACAGCGCCACTTATACTTGAAAACAAAAGCAGCTGTAGTAACTTTACAGTCAGCTTACCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp GATCGTCTTATCATACTTTGCCACATTCAGCAATACTaGAACAGCATATCCAACGACTTCCATACAAGGAAC +
Preference number: 6 (lower is better)
Translates to: DRLIILCHIQQY*NSISNDFHTRN
Trigger: GTTCCTTGTATGGAAGTCGTTGGATATGCTGTTCAAGTATTGCTGAATGTGGCAAAGTATGATAAGACGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp CTTTCATACCACGGTAAGCTGACTGTAAAGTTACTACAGCTGCTTTaGTTTTCAAGTATAAGTGGCGCTGTTCTTTTCCAACTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: LSYHGKLTVKLLQLL*FSSISGAVLFQLCK
Trigger: CTTACAAAGTTGGAAAAGAACAGCGCCACTTATACTTGAAAACAAAAGCAGCTGTAGTAACTTTACAGTCAGCTTACCGTGGTATGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TTCTTTACGGAGATCCAAAAGCCTTGCACAAAGAAATaGCAAATAGGTGATAACCACCTTTTCGTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: FFTEIQKPCTKK*QIGDNHLFVWN
Trigger: ATTCCAGACGAAAAGGTGGTTATCACCTATTTGTCATTTCTTTGTGCAAGGCTTTTGGATCTCCGTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS TCA 72 bp ATGGCATCTTTCCTTCTCTTATATAACTTTTGGGCTTaGAAGCACCGAACTCTTCTCTGGATGACAATAACA +
Preference number: 6 (lower is better)
Translates to: MASFLLLYNFWA*KHRTLLWMTIT
Trigger: TGTTATTGTCATCCAGAGAAGAGTTCGGTGCTTTCAAGCCCAAAAGTTATATAAGAGAAGGAAAGATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp ATCGTCTTATCATACTTTGCCACATTCAGCAATACTTaGACAGCATATCCAACGACTTCCATACAAGGAACA +
Preference number: 6 (lower is better)
Translates to: IVLSYFATFSNT*TAYPTTSIQGT
Trigger: TGTTCCTTGTATGGAAGTCGTTGGATATGCTGTTCAAGTATTGCTGAATGTGGCAAAGTATGATAAGACGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS GCA 72 bp CTTTCTGGTATACAAGGAAAGCCTACACAGGAATTCTaGTTCTGCTTATCAAACAATCCCTGTGTATTTACT +
Preference number: 6 (lower is better)
Translates to: LSGIQGKPTQEF*FCLSNNPCVFT
Trigger: AGTAAATACACAGGGATTGTTTGATAAGCAGAAGCAGAATTCCTGTGTAGGCTTTCCTTGTATACCAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp CCCAAAACAAGGCTGGCAGCGTTCACTTTAGAAACATaGGTTTTTACAGTGAAGTCATCAGGTGTTAATATA +
Preference number: 6 (lower is better)
Translates to: PKTRLAAFTLET*VFTVKSSGVNI
Trigger: TATATTAACACCTGATGACTTCACTGTAAAAACCAATGTTTCTAAAGTGAACGCTGCCAGCCTTGTTTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 72 bp ACAAAAAGCATCCTGAAACTCAGAAATCTTGGGCTTTaGCTTTGTAAAATCATACGTATGTGGCTTCACTTC +
Preference number: 6 (lower is better)
Translates to: TKSILKLRNLGL*LCKIIRMWLHF
Trigger: GAAGTGAAGCCACATACGTATGATTTTACAAAGCAAAAGCCCAAGATTTCTGAGTTTCAGGATGCTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053364.12
ENSMUST00000200083.5
CDS CAA 90 bp TTTTCTGAGAGCAATGAATCGTCTCCTTACTATAAAAGCTCTAAATaGACTCTGAATAAGGGTTGCAGAAGAATGCATAGTCTTCAGATG +
Preference number: 6 (lower is better)
Translates to: FSESNESSPYYKSSK*TLNKGCRRMHSLQM
Trigger: CATCTGAAGACTATGCATTCTTCTGCAACCCTTATTCAGAGTCAATTTAGAGCTTTTATAGTAAGGAGACGATTCATTGCTCTCAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS TCA 72 bp TTTAATATTCCGGTACCACCTCTGAATTACAATAGCTaGAGTTCTATAGGTCGTGTACTTCTTTTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: FNIPVPPLNYNS*SSIGRVLLLCS
Trigger: AGAACACAAAAGAAGTACACGACCTATAGAACTTCAGCTATTGTAATTCAGAGGTGGTACCGGAATATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS GCA 72 bp TACTATAAAAGCTCTAAATTGACTCTGAATAAGGGTTaGAGAAGAATGCATAGTCTTCAGATGACTTCTGGT +
Preference number: 6 (lower is better)
Translates to: YYKSSKLTLNKG*RRMHSLQMTSG
Trigger: ACCAGAAGTCATCTGAAGACTATGCATTCTTCTGCAACCCTTATTCAGAGTCAATTTAGAGCTTTTATAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12
CDS CAA 72 bp AGCAATGAATCGTCTCCTTACTATAAAAGCTCTAAATaGACTCTGAATAAGGGTTGCAGAAGAATGCATAGT +
Preference number: 6 (lower is better)
Translates to: SNESSPYYKSSK*TLNKGCRRMHS
Trigger: ACTATGCATTCTTCTGCAACCCTTATTCAGAGTCAATTTAGAGCTTTTATAGTAAGGAGACGATTCATTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053364.12