Pregenerated sensors for ASPHD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029348Ensembl transcript IDs: ENSMUST00000031291.9, ENSMUST00000196256.2, ENSMUST00000197585.5, ENSMUST00000199906.2, ENSMUST00000200227.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCATGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTaGCTGCGCTCTCCTATCAGCTGGACCCAGGGCCTCTGGTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: AHGATTPSASLRVPG*LRSPISWTQGLWLA Trigger: GGCCAACCAGAGGCCCTGGGTCCAGCTGATAGGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR TCA 90 bp | CTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCATCCCTaGGAGTGCCTGGCTGACTGCGCTCTCCTATCAGCTGGACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLWTMPMGPPLPAHP*ECLADCALLSAGPR Trigger: CCTGGGTCCAGCTGATAGGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 90 bp | CCATGCCCATGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTaGCTGACTGCGCTCTCCTATCAGCTGGACCCAGGGCCTCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: PCPWGHHSQRIPESA*LTALSYQLDPGPLV Trigger: AACCAGAGGCCCTGGGTCCAGCTGATAGGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR TCA 90 bp | CCAGGTGTACAGGCAGGCTGCAGGCTGTTTCCTGCTCTGGGACAGTaGGGAACCCCAGCATCAGAGGCCAAGCTGTCTGGCTCAATGGCT | + |
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Preference number: 1 (lower is better) Translates to: PGVQAGCRLFPALGQ*GTPASEAKLSGSMA Trigger: AGCCATTGAGCCAGACAGCTTGGCCTCTGATGCTGGGGTTCCTCACTGTCCCAGAGCAGGAAACAGCCTGCAGCCTGCCTGTACACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 90 bp | TTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATaGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: LYQKLSTLSCSGPCP*GHHSQRIPESAWLT Trigger: AGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 90 bp | GGAAAGACGCCCCACAGTGGCAGGAAGCCATTCATGCTTCCAGCATaGATCAGGGCACAGTCAGGGTGGGCAATCCCACAGTCCACCCAT | + |
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Preference number: 1 (lower is better) Translates to: GKTPHSGRKPFMLPA*IRAQSGWAIPQSTH Trigger: ATGGGTGGACTGTGGGATTGCCCACCCTGACTGTGCCCTGATCCATGCTGGAAGCATGAATGGCTTCCTGCCACTGTGGGGCGTCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 90 bp | GAAACCAACCAGGTGTACAGGCAGGCTGCAGGCTGTTTCCTGCTCTaGGACAGTGAGGAACCCCAGCATCAGAGGCCAAGCTGTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: ETNQVYRQAAGCFLL*DSEEPQHQRPSCLA Trigger: AGCCAGACAGCTTGGCCTCTGATGCTGGGGTTCCTCACTGTCCCAGAGCAGGAAACAGCCTGCAGCCTGCCTGTACACCTGGTTGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 90 bp | CCCTGTTCTGTGGCTGACCTGAGAGCCCTCACTAGCCTTCAGCTCTaGAGGAAGCTGTGGTTAAAGAAAAGGCCCAGGTCGCCACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PCSVADLRALTSLQL*RKLWLKKRPRSPPA Trigger: TGCTGGTGGCGACCTGGGCCTTTTCTTTAACCACAGCTTCCTCCAGAGCTGAAGGCTAGTGAGGGCTCTCAGGTCAGCCACAGAACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR GCA 90 bp | TTGGACCTAACATCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTaGTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: LDLTSNLYQKLSTLS*SGPCPWGHHSQRIP Trigger: AGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGATGTTAGGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR TCA 90 bp | GGCCTTCACTTTGGGAAAAGAACTGTGTGTGTCTTCTCTGGTGACTaGAGAGTCAGCTGTCTCTGGTGTCAGAGACACCCATGGGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: GLHFGKRTVCVFSGD*RVSCLWCQRHPWAP Trigger: CGGAGCCCATGGGTGTCTCTGACACCAGAGACAGCTGACTCTTCAGTCACCAGAGAAGACACACACAGTTCTTTTCCCAAAGTGAAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTGACTGCGCTCTCCCCCATCCACTCAGCCTaGCTCCAGCCCAGGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: WGHHSQRIPESAWLTALSPIHSA*LQPRQC Trigger: ACATTGCCTGGGCTGGAGCCAGGCTGAGTGGATGGG...GGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCAGGTTGGCCTTCACTTTaGGAAAAGAACTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: CPLCPALDHAHGATTPSAGWPSL*EKNCVC Trigger: ACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACC...TGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTATCAGCTGGACCCAGGGCCTCTGGTTGGCCTTCACTTTGGGAAAAGAAGTTCTGTGGCTGACCTaGGAGCCCTCACTAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPISWTQGLWLAFTLGKEVLWLT*EPSLAF Trigger: GAAGGCTAGTGAGGGCTCTCAGGTCAGCCACAGAAC...TTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGGTCCAGCTGATAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCACTAGCCTTCAGCTCTaGAGGAAGCTGTGGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: KSCPLCPALDHAHGATTPTSLQL*RKLWLK Trigger: CTTTAACCACAGCTTCCTCCAGAGCTGAAGGCTAGT...GGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | GACCTAACATCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCAGGCTGTTTCCTGCTCTaGGACAGTGAGGAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DLTSNLYQKLSTLSCSGPGCFLL*DSEEPQ Trigger: CTGGGGTTCCTCACTGTCCCAGAGCAGGAAACAGCC...TGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGATGTTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCATTTGGTTACTCTATTCCAGAACATGGACAGGACACCAGGTAGCAAAGTGAGGGCACAGTCAGGGTaGGCAATCCCACAGTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SHLVTLFQNMDRTPGSKVRAQSG*AIPQST Trigger: GGTGGACTGTGGGATTGCCCACCCTGACTGTGCCCT...CACTTTGCTACCTGGTGTCCTGTCCATGTTCTGGAATAGAGTAACCAAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACAAAGACGCCCCACAGTaGCAGGAAGCCATTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHKDAPQ*QEAIHA Trigger: AGCATGAATGGCTTCCTGCCACTGTGGGGCGTCTTT...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTCTGGTTGGCCTTCACTTTGGGAAAAGAACTGTGTGTGTCTTCTCTGGTCATGGCCATAACTCTTaGCTGTCTCTGAGTCTAGCG | + |
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Preference number: 2 (lower is better) Translates to: GPLVGLHFGKRTVCVFSGHGHNS*LSLSLA Trigger: CGCTAGACTCAGAGACAGCCAAGAGTTATGGCCATG...ACCAGAGAAGACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACCTCTGGAGGAAGCTGTaGTTAAAGAAAAGGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHLWRKL*LKKRPR Trigger: CCTGGGCCTTTTCTTTAACCACAGCTTCCTCCAGAG...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGGACTGACATCATCAAATTACCTTCTAAAGGTGACTGGTTTTGCATTTGGACCCACTCTGTCCTGCTCTaGACCATGCCCATGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: WTDIIKLPSKGDWFCIWTHSVLL*TMPMGP Trigger: TGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTG...GGTCCAAATGCAAAACCAGTCACCTTTAGAAGGTAATTTGATGATGTCAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CCA 90 bp | TGGACTGACATCATCAAATTACCTTCTAAAGGTGACTGGTTTTGCATTTGGACCCCCAGGGCCTCTGGTTaGCCTTCACTTTGGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WTDIIKLPSKGDWFCIWTPRASG*PSLWEK Trigger: CTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGG...GGTCCAAATGCAAAACCAGTCACCTTTAGAAGGTAATTTGATGATGTCAGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGTTTTTGCTCTCTCTTaGGACAGCTACAGAAATTTA | + |
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Preference number: 2 (lower is better) Translates to: SNLYQKLSTLSCSGPCPWVFALS*DSYRNL Trigger: TAAATTTCTGTAGCTGTCTCAAGAGAGAGCAAAAAC...CCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR TCA 90 bp | TGGACTGACATCATCAAATTACCTTCTAAAGGTGACTGGTTTTGCATTTGGACCACAGACTGCAAAGCATaGTGGACAGGCACTACGGTC | + |
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Preference number: 2 (lower is better) Translates to: WTDIIKLPSKGDWFCIWTTDCKA*WTGTTV Trigger: GACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGT...GGTCCAAATGCAAAACCAGTCACCTTTAGAAGGTAATTTGATGATGTCAGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | TGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTaGCTGACTGCGCTCTCCTATCAGCTGGACCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: WGHHSQRIPESA*LTALSYQLDPG Trigger: CCCTGGGTCCAGCTGATAGGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR TCA 72 bp | ACCATGCCCATGGGGCCACCACTCCCAGCGCATCCCTaGGAGTGCCTGGCTGACTGCGCTCTCCTATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TMPMGPPLPAHP*ECLADCALLSA Trigger: AGCTGATAGGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | AAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATaGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: KLSTLSCSGPCP*GHHSQRIPESA Trigger: GGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | CAGGTGTACAGGCAGGCTGCAGGCTGTTTCCTGCTCTaGGACAGTGAGGAACCCCAGCATCAGAGGCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QVYRQAAGCFLL*DSEEPQHQRPS Trigger: GCTTGGCCTCTGATGCTGGGGTTCCTCACTGTCCCAGAGCAGGAAACAGCCTGCAGCCTGCCTGTACACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR GCA 72 bp | AAGGAAAGACGCCCCACAGTGGCAGGAAGCCATTCATaGTTCCAGCATGGATCAGGGCACAGTCAGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KERRPTVAGSHS*FQHGSGHSQGG Trigger: CCCACCCTGACTGTGCCCTGATCCATGCTGGAAGCATGAATGGCTTCCTGCCACTGTGGGGCGTCTTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | GTGGCTGACCTGAGAGCCCTCACTAGCCTTCAGCTCTaGAGGAAGCTGTGGTTAAAGAAAAGGCCCAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: VADLRALTSLQL*RKLWLKKRPRS Trigger: CGACCTGGGCCTTTTCTTTAACCACAGCTTCCTCCAGAGCTGAAGGCTAGTGAGGGCTCTCAGGTCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCTAGCGTGTGAAGGTTaGCACACAGATATAATCAAT | + |
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Preference number: 3 (lower is better) Translates to: PALDHAHGATTPSASLRVLACEG*HTDIIN Trigger: ATTGATTATATCTGTGTGCAAACCTTCACACGCTAG...CACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR GCA 72 bp | ACATCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTaGTCTGGACCATGCCCATGGGGCCACCACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TSNLYQKLSTLS*SGPCPWGHHSQ Trigger: CTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | AGCAAAGTGACACGGACAGGAGAGGCACAGAGCCTCTaGTCACAGCCAAAGGGACACACTAGTAGGCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SKVTRTGEAQSL*SQPKGHTSRPE Trigger: TTCTGGCCTACTAGTGTGTCCCTTTGGCTGTGACCAGAGGCTCTGTGCCTCTCCTGTCCGTGTCACTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | GGCCCAGGTCGCCACCAGCAGGGCTCTGATAGATTTTaGGGTCTATCAGCAATAATGATGGATTCCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPGRHQQGSDRF*GLSAIMMDSLG Trigger: GCCCAGGGAATCCATCATTATTGCTGATAGACCCCAAAATCTATCAGAGCCCTGCTGGTGGCGACCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | TGCGCTCTCCTATCAGCTGGACCCAGGGCCTCTGGTTaGCCTTCACTTTGGGAAAAGAACTGTGTGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: CALLSAGPRASG*PSLWEKNCVCL Trigger: AAGACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGGTCCAGCTGATAGGAGAGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | GAAGTTCCCAGTAACCAAAGGAAAGACGCCCCACAGTaGCAGGAAGCCATTCATGCTTCCAGCATGGATCAG | + |
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Preference number: 3 (lower is better) Translates to: EVPSNQRKDAPQ*QEAIHASSMDQ Trigger: CTGATCCATGCTGGAAGCATGAATGGCTTCCTGCCACTGTGGGGCGTCTTTCCTTTGGTTACTGGGAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | ACAGTGAGGAACCCCAGCATCAGAGGCCAAGCTGTCTaGCTCAATGGCTTCTGGTCTGTGGTGCTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TVRNPSIRGQAV*LNGFWSVVLCF Trigger: AAAACAAAGCACCACAGACCAGAAGCCATTGAGCCAGACAGCTTGGCCTCTGATGCTGGGGTTCCTCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR CCA 72 bp | TCCGGTTATCGGGTTGACAGACATGGCCATAACTCTTaGCTGTCTCTGAGTCTAGCGTGTGAAGGTTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SGYRVDRHGHNS*LSLSLACEGLH Trigger: GTGCAAACCTTCACACGCTAGACTCAGAGACAGCCAAGAGTTATGGCCATGTCTGTCAACCCGATAACCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCCAGCATGCTTCCTGCCAATCTTGTGGACTCGAAACCACAGCGGCAGCGAGACAAAACAGTCATTaGGTTACTCTATTCCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SAQHASCQSCGLETTAAARQNSH*VTLFQN Trigger: GTTCTGGAATAGAGTAACCAAATGACTGTTTTGTCT...CGCTGCCGCTGTGGTTTCGAGTCCACAAGATTGGCAGGAAGCATGCTGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR TCA 90 bp | TGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTGACTGCGCTCTCCTCCCGGATGCCCTTGTaGATGCGGCCCATGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: WGHHSQRIPESAWLTALSSRMPL*MRPMPD Trigger: GTCCGGCATGGGCCGCATTCACAAGGGCATCCGGGA...GGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR TCA 90 bp | ACAGTCAGGGTGGGCAATCCCACAGTCCACCCATCCACTCAGCCTGGCTCCAGCCCTGCAGGAGGGAGTTaGCAGACACGTGGGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TVRVGNPTVHPSTQPGSSPAGGS*QTRGGG Trigger: CCCGCCCCCACGTGTCTGTCAACTCCCTCCTGCAGG...GCTGGAGCCAGGCTGAGTGGATGGGTGGACTGTGGGATTGCCCACCCTGACTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR TCA 90 bp | TGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTGACTGCGCTCTCCGCCCATGCCGGACCATaGGTACCGCTTGGCGTATTC | + |
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Preference number: 4 (lower is better) Translates to: WGHHSQRIPESAWLTALSAHAGP*VPLGVF Trigger: GAATACGCCAAGCGGTACTCATGGTCCGGCATGGGC...GGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CCA 90 bp | TGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGCCTGGCTGACTGCGCTCTCCACTTCCTGCAGTTCCTaGGGACACAAACGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: WGHHSQRIPESAWLTALSTSCSS*GHKRPG Trigger: GCCAGGGCGTTTGTGTCCCCAGGAACTGCAGGAAGT...GGAGAGCGCAGTCAGCCAGGCACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR TCA 90 bp | TGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCAGTCCGTAGTGCTCCGTaGTCACAGTCCCAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CPLCPALDHAHGATTPSAVRSAP*SQSQGS Trigger: TGAGCCCTGGGACTGTGATCACGGAGCACTACGGAC...TGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCATCCCTGAGAGTGACTCCCCACTGGGGGTaGTGTTCACTTTCCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: PALDHAHGATTPSASLRVTPHWG*CSLSTL Trigger: AAGGGTGGAAAGTGAACAGCACCCCCAGTGGGGAGT...CACTCTCAGGGATGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CCA 90 bp | TGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCACAGTCCCGCACTGACTaGATACCGGTGGCAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: CPLCPALDHAHGATTPSAQSRTD*IPVAMQ Trigger: CTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTG...TGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR TCA 90 bp | GACGCCCCACAGTGGCAGGAAGCCATTCATGCTTCCAGCATGGATCAGGGCACACCCAGGGCTCAGCACTaGGATGCAGGCGTTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: DAPQWQEAIHASSMDQGTPRAQH*DAGVPE Trigger: TTCGGGAACGCCTGCATCTCAGTGCTGAGCCCTGGG...TGTGCCCTGATCCATGCTGGAAGCATGAATGGCTTCCTGCCACTGTGGGGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CCA 90 bp | AAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCCATTCTGCAGCCCGTTaGCATCCACGCCCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KSCPLCPALDHAHGATTPHSAAR*HPRPAG Trigger: TCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATG...GGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CCA 90 bp | TGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCAGCGCAGTGACTGGCAGTACATaGACCCATTCTGCAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CPLCPALDHAHGATTPSAVTGST*THSAAR Trigger: ACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCAC...TGCGCTGGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGCATGGATCAGGGCACAGTCAGGGTGGGCAATCCCACAGTCCACCCAGGTAGAGCTTCTGGTTaGGGCCTTCGTGGTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSMDQGTVRVGNPTVHPGRASG*GLRGVC Trigger: GCACACACCACGAAGGCCTCAACCAGAAGCTCTACC...TGGGTGGACTGTGGGATTGCCCACCCTGACTGTGCCCTGATCCATGCTGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCTGTGAATGCGGCCCATaGCGGACCATGAGTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSCPLCPALDHAHGATTPCECGP*RTMSTA Trigger: AGCGGTACTCATGGTCCGGCATGGGCCGCATTCACA...GGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR TCA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACTGGAGGGCTGGCTGCTaGGGTAGCGGCCCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHWRAGC*GSGPAP Trigger: GGGAGCAGGGCCGCTACCTCAGCAGCCAGCCCTCCA...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCAGCATGCTTCCTGCCAATCTTGTGGACTCGAAACCACAGCGGCAGCGTCCGCGGGCACTTCCTaGAGTTCCTGGGGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQHASCQSCGLETTAAASAGTS*SSWGHK Trigger: TTTGTGTCCCCAGGAACTGCAGGAAGTGCCCGCGGA...CGCTGCCGCTGTGGTTTCGAGTCCACAAGATTGGCAGGAAGCATGCTGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | GACGCCCCACAGTGGCAGGAAGCCATTCATGCTTCCAGCATGGATCAGGGCACACTGACTGGATACCGGTaGCAATGCAGTCCCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DAPQWQEAIHASSMDQGTLTGYR*QCSPSG Trigger: GCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAG...TGTGCCCTGATCCATGCTGGAAGCATGAATGGCTTCCTGCCACTGTGGGGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTCCCAGTAACCAAAGGAAAGACGCCCCACAGTGGCAGGAAGCCATTCATGGAGTTGACAGACACGTaGGGGCGGGGCTGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KFPVTKGKTPHSGRKPFMELTDT*GRGCSR Trigger: CCGCGAGCAGCCCCGCCCCCACGTGTCTGTCAACTC...CATGAATGGCTTCCTGCCACTGTGGGGCGTCTTTCCTTTGGTTACTGGGAACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCAGCATGCTTCCTGCCAATCTTGTGGACTCGAAACCACAGCGGCAGCGTACATGGACCCATTCTaGAGCCCGTTGGCATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SAQHASCQSCGLETTAAAYMDPF*SPLAST Trigger: CGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTA...CGCTGCCGCTGTGGTTTCGAGTCCACAAGATTGGCAGGAAGCATGCTGGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | GACAGTGAGGAACCCCAGCATCAGAGGCCAAGCTGTCTGGCTCAATGGCTTCTGGCTGCCACGTTGGGGTaGCAGAGGTCTACCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSEEPQHQRPSCLAQWLLAATLG*QRSTMK Trigger: CTTCATGGTAGACCTCTGGCACCCCAACGTGGCAGC...CAGAAGCCATTGAGCCAGACAGCTTGGCCTCTGATGCTGGGGTTCCTCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | TCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGATGCCCTTGTGAATaGGGCCCATGCCGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SNLYQKLSTLSCSGPCPWGCPCE*GPCRTM Trigger: CATGGTCCGGCATGGGCCGCATTCACAAGGGCATCC...CCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCTCTGGTTGGCCTTCACTTTGGGAAAAGAACTGTGTGTGTCTTCTCTGGTCTGACGTTCAGCAGCTaGCACGTTGGGGTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLVGLHFGKRTVCVFSGLTFSS*HVGVPE Trigger: CTCTGGCACCCCAACGTGGCAGCTGCTGAACGTCAG...ACCAGAGAAGACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACATGGTCGGTGGTAGATGGTTGAGGCCTTCGTaGTGTGTGCAGCGCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NRLQSMMDRHYGHMVGGRWLRPS*CVQRAH Trigger: GTGTGCGCGCTGCACACACCACGAAGGCCTCAACCA...TCTACCACCGACCATGTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | AACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACATGGTCGGTGGTAGACAGCAGCTGCCACGTTaGGGTGCCAGAGGTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRLQSMMDRHYGHMVGGRQQLPR*GARGLP Trigger: TGGTAGACCTCTGGCACCCCAACGTGGCAGCTGCTG...TCTACCACCGACCATGTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| 3UTR CAA 72 bp | CTGCGCTCTCCTATCAGCTGGACCCAGGGCCTCTGGTaGGCCTTCACTTTGGGAAAAGAACTGTGTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPISWTQGLW*AFTLGKELCVS Trigger: AGACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGGTCCAGCTGATAGGAGAGCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTATCAGCTGGACCCAGGGCCTCTGGTTGGCCTTCACTTTGGGAAAAGAAGTCCCGGAGCAAAGATaGAATCCAGGGCCTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPISWTQGLWLAFTLGKEVPEQR*NPGPDV Trigger: AACGTCAGGCCCTGGATTTCATCTTTGCTCCGGGAC...TTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGGTCCAGCTGATAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTGGTCACAGCCAAAGGGACACACTAGTAGGCCAGAAGTCCCAGCAATTCTAGGTGGCATCGGATaGGGATGTTTGTGGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWSQPKGHTSRPEVPAILGGIG*GCLWVR Trigger: ACGGACCCACAAACATCCGCATCCGATGCCACCTAG...AATTGCTGGGACTTCTGGCCTACTAGTGTGTCCCTTTGGCTGTGACCAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACGGATACCGGTGGCAATaGAGTCCCTCAGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHGYRWQ*SPSGHP Trigger: TGGATGGCCTGAGGGACTGCATTGCCACCGGTATCC...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | GACCTAACATCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCATACAGGTCCGGAGGCTaGCGAGCAAGCGGTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLTSNLYQKLSTLSCSGPYRSGG*RASGKS Trigger: GGACTTACCGCTTGCTCGGCAGCCTCCGGACCTGTA...TGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGATGTTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| 3UTR CAA 72 bp | ATCAGCTGGACCCAGGGCCTCTGGTTGGCCTTCACTTaGGGAAAAGAACTGTGTGTGTCTTCTCTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISWTQGLWLAFT*GKELCVSSLVT Trigger: AGTCACCAGAGAAGACACACACAGTTCTTTTCCCAAAGTGAAGGCCAACCAGAGGCCCTGGGTCCAGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR TCA 90 bp | GACCTAACATCAAACTTGTACCAAAAGCTGTCCACTCTGTCCTGCTCTGGACCAATCGCAGTCCCGCACTaGCTGGATACCGGTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLTSNLYQKLSTLSCSGPIAVPH*LDTGGN Trigger: ATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGAT...TGGTCCAGAGCAGGACAGAGTGGACAGCTTTTGGTACAAGTTTGATGTTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACGCACACTCTGGTGACTaGCAGTACATGGACCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHAHSGD*QYMDPF Trigger: GAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGC...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATTTGGTTACTCTATTCCAGAACATGGACAGGACACCAGGTAGCAAAGTGCATGAAGACCACCCGTaGGCCATCCTCAGCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVTLFQNMDRTPGSKVHEDHP*AILSGT Trigger: GGTTCCGCTGAGGATGGCCCACGGGTGGTCTTCATG...CACTTTGCTACCTGGTGTCCTGTCCATGTTCTGGAATAGAGTAACCAAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAGGTGACTGGTTTTGCATTTGGACCTAACATCAAACTTGTACCAAAAGCTATGAAATCCAGGGCCTaGCGTTCAGCAGCTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LKVTGFAFGPNIKLVPKAMKSRA*RSAAAT Trigger: CGTGGCAGCTGCTGAACGTCAGGCCCTGGATTTCAT...AGCTTTTGGTACAAGTTTGATGTTAGGTCCAAATGCAAAACCAGTCACCTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATTTGGTTACTCTATTCCAGAACATGGACAGGACACCAGGTAGCAAAGTGACCATGAGTACCGCTTaGCGTATTCCTGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLVTLFQNMDRTPGSKVTMSTA*RIPAGC Trigger: ACAACCTGCAGGAATACGCCAAGCGGTACTCATGGT...CACTTTGCTACCTGGTGTCCTGTCCATGTTCTGGAATAGAGTAACCAAATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR GCA 90 bp | TGGACTGACATCATCAAATTACCTTCTAAAGGTGACTGGTTTTGCATTTGGACCGGCTCAGCACTGAGATaGAGGCGTTCCCGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: WTDIIKLPSKGDWFCIWTGSALR*RRSRKH Trigger: ATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGCC...GGTCCAAATGCAAAACCAGTCACCTTTAGAAGGTAATTTGATGATGTCAGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CCA 90 bp | TGGACTGACATCATCAAATTACCTTCTAAAGGTGACTGGTTTTGCATTTGGACCGTCTTCAAACCTAGGTaGCATCGGATGCGGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WTDIIKLPSKGDWFCIWTVFKPR*HRMRMF Trigger: AAACATCCGCATCCGATGCCACCTAGGTTTGAAGAC...GGTCCAAATGCAAAACCAGTCACCTTTAGAAGGTAATTTGATGATGTCAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| 3UTR CAA 72 bp | TCTGGCTCAATGGCTTCTGGTCTGTGGTGCTTTGTTTaGGTTTTGTTTGTTTGTTTTTGCTCTCTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSMASGLWCFV*VLFVCFCSLLR Trigger: TCTCAAGAGAGAGCAAAAACAAACAAACAAAACCAAAACAAAGCACCACAGACCAGAAGCCATTGAGCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| 3UTR CAA 72 bp | TCAATGGCTTCTGGTCTGTGGTGCTTTGTTTTGGTTTaGTTTGTTTGTTTTTGCTCTCTCTTGAGACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SMASGLWCFVLV*FVCFCSLLRQL Trigger: TAGCTGTCTCAAGAGAGAGCAAAAACAAACAAACAAAACCAAAACAAAGCACCACAGACCAGAAGCCATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS GCA 90 bp | TGGCAGTACATGGACCCATTCTGCAGCCCGTTGGCATCCACGCCCTaGAGGAGGGAGTTGACAGACACGTGGGGGCGGGGCTGCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WQYMDPFCSPLASTP*RRELTDTWGRGCSR Trigger: CCGCGAGCAGCCCCGCCCCCACGTGTCTGTCAACTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
||
| CDS GCA 90 bp | CGGCTGTGCCATCGCAGTCCCGCACTGACTGGATACCGGTGGCAATaGAGTCCCTCAGGCCATCCAGAGACCAGCTCCAGGCCACCAACC | + |
|
Preference number: 5 (lower is better) Translates to: RLCHRSPALTGYRWQ*SPSGHPETSSRPPT Trigger: GGTTGGTGGCCTGGAGCTGGTCTCTGGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGCTGTCCACTCTGTCCTGCTCTGGACCATGCCCATGGGGCCACCACTCCCCCCTGCAGGAGGGAGTaGACAGACACGTGGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSCPLCPALDHAHGATTPPCRRE*TDTWGR Trigger: CCGCCCCCACGTGTCTGTCAACTCCCTCCTGCAGGG...GGGAGTGGTGGCCCCATGGGCATGGTCCAGAGCAGGACAGAGTGGACAGCTTTT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS TCA 90 bp | CAGGCAGGCCACGGTGATGACGGCTGTGCCATCGCAGTCCCGCACTaGCTGGATACCGGTGGCAATGCAGTCCCTCAGGCCATCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAGHGDDGCAIAVPH*LDTGGNAVPQAIQR Trigger: TCTCTGGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAGCCGTCATCACCGTGGCCTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
||
| CDS CCA 90 bp | CAGGCCACGGTGATGACGGCTGTGCCATCGCAGTCCCGCACTGACTaGATACCGGTGGCAATGCAGTCCCTCAGGCCATCCAGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QATVMTAVPSQSRTD*IPVAMQSLRPSRDQ Trigger: CTGGTCTCTGGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAGCCGTCATCACCGTGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
||
| CDS CCA 90 bp | CTTCGTGGTGTGTGCAGCGCGCACACTCTGGTGACTGGCAGTACATaGACCCATTCTGCAGCCCGTTGGCATCCACGCCCTGCAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGVCSAHTLVTGST*THSAARWHPRPAGG Trigger: CCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGCGCGCTGCACACACCACGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
||
| CDS GCA 90 bp | GTGCAGCGCGCACACTCTGGTGACTGGCAGTACATGGACCCATTCTaGAGCCCGTTGGCATCCACGCCCTGCAGGAGGGAGTTGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VQRAHSGDWQYMDPF*SPLASTPCRRELTD Trigger: GTCTGTCAACTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGCGCGCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
||
| CDS CCA 90 bp | TGGTTGAGGCCTTCGTGGTGTGTGCAGCGCGCACACTCTGGTGACTaGCAGTACATGGACCCATTCTGCAGCCCGTTGGCATCCACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLRPSWCVQRAHSGD*QYMDPFCSPLASTP Trigger: GGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGCGCGCTGCACACACCACGAAGGCCTCAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
||
| CDS TCA 90 bp | GCCCTGCTCCCGGATGCCCTTGTGAATGCGGCCCATGCCGGACCATaGGTACCGCTTGGCGTATTCCTGCAGGTTGTGGTAGAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLPDALVNAAHAGP*VPLGVFLQVVVELL Trigger: CAGAAGCTCTACCACAACCTGCAGGAATACGCCAAGCGGTACTCATGGTCCGGCATGGGCCGCATTCACAAGGGCATCCGGGAGCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
||
| CDS TCA 90 bp | CTTCTGGTTGAGGCCTTCGTGGTGTGTGCAGCGCGCACACTCTGGTaGCTGGCAGTACATGGACCCATTCTGCAGCCCGTTGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLVEAFVVCAARTLW*LAVHGPILQPVGIH Trigger: GTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGCGCGCTGCACACACCACGAAGGCCTCAACCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
||
| CDS TCA 90 bp | CTAGGTGGCATCGGATGCGGATGTTTGTGGGTCCGTAGTGCTCCGTaGTCACAGTCCCAGGGCTCAGCACTGAGATGCAGGCGTTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LGGIGCGCLWVRSAP*SQSQGSALRCRRSR Trigger: TCGGGAACGCCTGCATCTCAGTGCTGAGCCCTGGGACTGTGATCACGGAGCACTACGGACCCACAAACATCCGCATCCGATGCCACCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS GCA 90 bp | TGCAGGCGTTCCCGAAAACATTGTTCCCAATACAGGTCCGGAGGCTaGCGAGCAAGCGGTAAGTCCGCGGGCACTTCCTGCAGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRRSRKHCSQYRSGG*RASGKSAGTSCSSW Trigger: CCAGGAACTGCAGGAAGTGCCCGCGGACTTACCGCTTGCTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGGAACGCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CAA 90 bp | ACAGTCAGGGTGGGCAATCCCACAGTCCACCCATCCACTCAGCCTGGCTCCAGCACCAGCTCGCAGCCATaGGGAGTCTTCAAACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVRVGNPTVHPSTQPGSSTSSQP*GVFKPR Trigger: CCTAGGTTTGAAGACTCCCAATGGCTGCGAGCTGGT...GCTGGAGCCAGGCTGAGTGGATGGGTGGACTGTGGGATTGCCCACCCTGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS TCA 90 bp | AGTACCGCTTGGCGTATTCCTGCAGGTTGTGGTAGAGCTTCTGGTTaGGGCCTTCGTGGTGTGTGCAGCGCGCACACTCTGGTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: STAWRIPAGCGRASG*GLRGVCSAHTLVTG Trigger: GCCAGTCACCAGAGTGTGCGCGCTGCACACACCACGAAGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAATACGCCAAGCGGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTCCCAGTAACCAAAGGAAAGACGCCCCACAGTGGCAGGAAGCCATTCATGCCATTCTGCAGCCCGTaGGCATCCACGCCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVTKGKTPHSGRKPFMPFCSP*ASTPCR Trigger: CCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGG...CATGAATGGCTTCCTGCCACTGTGGGGCGTCTTTCCTTTGGTTACTGGGAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS TCA 90 bp | TGTGGGTCCGTAGTGCTCCGTGATCACAGTCCCAGGGCTCAGCACTaGGATGCAGGCGTTCCCGAAAACATTGTTCCCAATACAGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CGSVVLRDHSPRAQH*DAGVPENIVPNTGP Trigger: CGGACCTGTATTGGGAACAATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGCCCTGGGACTGTGATCACGGAGCACTACGGACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
||
| CDS-3UTR CAA 90 bp | GACAGTGAGGAACCCCAGCATCAGAGGCCAAGCTGTCTGGCTCAATGGCTTCTGGCGTTCCCGAAAACATaGTTCCCAATACAGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: DSEEPQHQRPSCLAQWLLAFPKT*FPIQVR Trigger: CCGGACCTGTATTGGGAACAATGTTTTCGGGAACGC...CAGAAGCCATTGAGCCAGACAGCTTGGCCTCTGATGCTGGGGTTCCTCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CAA 90 bp | TGTCAACCCTTAGGTAACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACTCAGCAGCTGCCACGTaGGGGTGCCAGAGGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: CQPLGNRLQSMMDRHYGHSAAAT*GCQRST Trigger: GGTAGACCTCTGGCACCCCAACGTGGCAGCTGCTGA...GTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTTACCTAAGGGTTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CAA 90 bp | AGCCTCTGGTCACAGCCAAAGGGACACACTAGTAGGCCAGAAGTCCCAGCAATTGACCATGAGTACCGCTaGGCGTATTCCTGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLWSQPKGHTSRPEVPAIDHEYR*AYSCRL Trigger: CAACCTGCAGGAATACGCCAAGCGGTACTCATGGTC...AATTGCTGGGACTTCTGGCCTACTAGTGTGTCCCTTTGGCTGTGACCAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS-3UTR CAA 90 bp | AACAGACTGCAAAGCATGATGGACAGGCACTACGGTCACATGGTCGGTGGTAGAATCGGATGCGGATGTTaGTGGGTCCGTAGTGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: NRLQSMMDRHYGHMVGGRIGCGC*WVRSAP Trigger: CGGAGCACTACGGACCCACAAACATCCGCATCCGAT...TCTACCACCGACCATGTGACCGTAGTGCCTGTCCATCATGCTTTGCAGTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS GCA 72 bp | ATGGACCCATTCTGCAGCCCGTTGGCATCCACGCCCTaGAGGAGGGAGTTGACAGACACGTGGGGGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: MDPFCSPLASTP*RRELTDTWGRG Trigger: GCCCCGCCCCCACGTGTCTGTCAACTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
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| CDS TCA 72 bp | CACGGTGATGACGGCTGTGCCATCGCAGTCCCGCACTaGCTGGATACCGGTGGCAATGCAGTCCCTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HGDDGCAIAVPH*LDTGGNAVPQA Trigger: GGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAGCCGTCATCACCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
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| CDS GCA 72 bp | GGCCCTGCTCCCGGATGCCCTTGTGAATGCGGCCCATaGCGGACCATGAGTACCGCTTGGCGTATTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GPAPGCPCECGP*RTMSTAWRIPA Trigger: TGCAGGAATACGCCAAGCGGTACTCATGGTCCGGCATGGGCCGCATTCACAAGGGCATCCGGGAGCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
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| CDS CAA 90 bp | GCACACTCTGGTGACTGGCAGTACATGGACCCATTCTGCAGCCCGTaGGCATCCACGCCCTGCAGGAGGGAGTTGACAGACACGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AHSGDWQYMDPFCSP*ASTPCRRELTDTWG Trigger: CCCCCACGTGTCTGTCAACTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
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| CDS GCA 72 bp | CATCGCAGTCCCGCACTGACTGGATACCGGTGGCAATaGAGTCCCTCAGGCCATCCAGAGACCAGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HRSPALTGYRWQ*SPSGHPETSSR Trigger: CCTGGAGCTGGTCTCTGGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
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| CDS GCA 72 bp | GCACACTCTGGTGACTGGCAGTACATGGACCCATTCTaGAGCCCGTTGGCATCCACGCCCTGCAGGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: AHSGDWQYMDPF*SPLASTPCRRE Trigger: CTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
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| CDS CCA 72 bp | CTGTGCCATCGCAGTCCCGCACTGACTGGATACCGGTaGCAATGCAGTCCCTCAGGCCATCCAGAGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LCHRSPALTGYR*QCSPSGHPETS Trigger: GCTGGTCTCTGGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
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| CDS CCA 72 bp | GTGATGACGGCTGTGCCATCGCAGTCCCGCACTGACTaGATACCGGTGGCAATGCAGTCCCTCAGGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: VMTAVPSQSRTD*IPVAMQSLRPS Trigger: GGATGGCCTGAGGGACTGCATTGCCACCGGTATCCAGTCAGTGCGGGACTGCGATGGCACAGCCGTCATCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000197585.5 ENSMUST00000199906.2 ENSMUST00000200227.2 |
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| CDS CCA 72 bp | GTGTGCAGCGCGCACACTCTGGTGACTGGCAGTACATaGACCCATTCTGCAGCCCGTTGGCATCCACGCCCT | + |
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Preference number: 6 (lower is better) Translates to: VCSAHTLVTGST*THSAARWHPRP Trigger: AGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACCAGAGTGTGCGCGCTGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
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| CDS CAA 72 bp | GGTGACTGGCAGTACATGGACCCATTCTGCAGCCCGTaGGCATCCACGCCCTGCAGGAGGGAGTTGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: GDWQYMDPFCSP*ASTPCRRELTD Trigger: GTCTGTCAACTCCCTCCTGCAGGGCGTGGATGCCAACGGGCTGCAGAATGGGTCCATGTACTGCCAGTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031291.9 ENSMUST00000196256.2 ENSMUST00000200227.2 |
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| CDS TCA 72 bp | CCGGATGCCCTTGTGAATGCGGCCCATGCCGGACCATaGGTACCGCTTGGCGTATTCCTGCAGGTTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PDALVNAAHAGP*VPLGVFLQVVV Trigger: TACCACAACCTGCAGGAATACGCCAAGCGGTACTCATGGTCCGGCATGGGCCGCATTCACAAGGGCATCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
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| CDS GCA 72 bp | TCCCGAAAACATTGTTCCCAATACAGGTCCGGAGGCTaGCGAGCAAGCGGTAAGTCCGCGGGCACTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRKHCSQYRSGG*RASGKSAGTSC Trigger: GCAGGAAGTGCCCGCGGACTTACCGCTTGCTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS CCA 72 bp | GTTGGGGTGCCAGAGGTCTACCATGAAGACCACCCGTaGGCCATCCTCAGCGGAACCTTCATGGAACGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VGVPEVYHEDHP*AILSGTFMERS Trigger: ACTGCGTTCCATGAAGGTTCCGCTGAGGATGGCCCACGGGTGGTCTTCATGGTAGACCTCTGGCACCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS TCA 72 bp | TGGCGTATTCCTGCAGGTTGTGGTAGAGCTTCTGGTTaGGGCCTTCGTGGTGTGTGCAGCGCGCACACTCTG | + |
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Preference number: 6 (lower is better) Translates to: WRIPAGCGRASG*GLRGVCSAHTL Trigger: CAGAGTGTGCGCGCTGCACACACCACGAAGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAATACGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
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| CDS TCA 72 bp | ATCGGATGCGGATGTTTGTGGGTCCGTAGTGCTCCGTaGTCACAGTCCCAGGGCTCAGCACTGAGATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: IGCGCLWVRSAP*SQSQGSALRCR Trigger: CCTGCATCTCAGTGCTGAGCCCTGGGACTGTGATCACGGAGCACTACGGACCCACAAACATCCGCATCCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS CAA 72 bp | GGGCTCAGCACTGAGATGCAGGCGTTCCCGAAAACATaGTTCCCAATACAGGTCCGGAGGCTGCCGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GLSTEMQAFPKT*FPIQVRRLPSK Trigger: CTTGCTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS CCA 72 bp | TGTGAATGCGGCCCATGCCGGACCATGAGTACCGCTTaGCGTATTCCTGCAGGTTGTGGTAGAGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CECGPCRTMSTA*RIPAGCGRASG Trigger: ACCAGAAGCTCTACCACAACCTGCAGGAATACGCCAAGCGGTACTCATGGTCCGGCATGGGCCGCATTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031291.9 ENSMUST00000200227.2 |
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| CDS GCA 72 bp | GGGCCATCCTCAGCGGAACCTTCATGGAACGCAGTGTaGAGGAACGAGTCATCAAAGAGTAAGCATCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GPSSAEPSWNAV*RNESSKSKHRP Trigger: AGGCCGATGCTTACTCTTTGATGACTCGTTCCTGCACACTGCGTTCCATGAAGGTTCCGCTGAGGATGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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| CDS TCA 72 bp | GTAGTGCTCCGTGATCACAGTCCCAGGGCTCAGCACTaGGATGCAGGCGTTCCCGAAAACATTGTTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: VVLRDHSPRAQH*DAGVPENIVPN Trigger: ATTGGGAACAATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGCCCTGGGACTGTGATCACGGAGCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031291.9 |
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