Pregenerated sensors for ASPHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046378Ensembl transcript IDs: ENSMUST00000052937.12, ENSMUST00000106339.2, ENSMUST00000106340.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAAAGAATCAGGACTTAGGAGAGGATTGAGAATTTGTATTCAATaGTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RKESGLRRGLRICIQ*WLRRWRRGPDHHSG Trigger: GCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCCTCTCCTAAGTCCTGATTCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| 3UTR CCA 90 bp | AAAGAATCAGGACTTAGGAGAGGATTGAGAATTTGTATTCAATGCTaGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: KESGLRRGLRICIQC*LRRWRRGPDHHSGC Trigger: ACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCCTCTCCTAAGTCCTGATTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCCAAGCCGTGGAGAAGAGGTCCTaGCCACCACTCAGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DAYAWLFCGRNMSPLSQAVEKRS*PPLRLS Trigger: GGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCAC...GGCTTGGGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| 3UTR GCA 72 bp | GAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTaGAGCATCACTCAGCTCAGGTGCCAGAAGCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: EEVLTTTQAVRE*SITQLRCQKRL Trigger: GAGACGCTTCTGGCACCTGAGCTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| 3UTR TCA 72 bp | TATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTaGCCACCACTCAGGCTGTCCGTGAGTGCAGCATCA | + |
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Preference number: 3 (lower is better) Translates to: YSMLAEEVEKRS*PPLRLSVSAAS Trigger: TGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| 3UTR TCA 72 bp | GAGATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATaGGCCCCTTGTCCCAAGCCCTGGCCTGGGATTGGT | + |
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Preference number: 3 (lower is better) Translates to: EMLMPGCFVVET*APCPKPWPGIG Trigger: ACCAATCCCAGGCCAGGGCTTGGGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | CAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGCCGGTCCCCAGGGCCTaGATGTCTTGGGAACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QCWLRRWRRGPDHHSGCPPVPRA*MSWEPS Trigger: ACTGGGTTCCCAAGACATGCAGGCCCTGGGGACCGG...CGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | CAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGACCGCCGGCAGTTGCTaGGTTGGCATCGGCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QCWLRRWRRGPDHHSGCPTAGSC*VGIGLL Trigger: AAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGT...CGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | TGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCAGGCCAGAGCCTCCCTaGGCTGCCCGCCTCACCCTA | + |
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Preference number: 4 (lower is better) Translates to: CIQCWLRRWRRGPDHHSGRPEPP*AARLTL Trigger: TAGGGTGAGGCGGGCAGCTCAGGGAGGCTCTGGCCT...GCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGTCCACCAGGAGGCAGTaGCCTTCAGCCCAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQSTRRQ*PSAQHW Trigger: CCAGTGCTGGGCTGAAGGGCACTGCCTCCTGGTGGA...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGAGAGCCTCCCTGAGCTaGCCGCCTCACCCTACCCAT | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQRASLS*PPHPTH Trigger: ATGGGTAGGGTGAGGCGGGCAGCTCAGGGAGGCTCT...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | CAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGGGGTTGGCATCGGCCTaGTTGGTACAGCAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QCWLRRWRRGPDHHSGCPGLASA*LVQQEL Trigger: CAGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCC...CGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCCTTCAGCCCAGCACTaGGGCTCACCACCAACAACC | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITPSAQH*GSPPTT Trigger: GGTTGTTGGTGGTGAGCCCCAGTGCTGGGCTGAAGG...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGCCTTCAGCCCAGCACTaGGGCTCACCACCAACAACC | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQPSAQH*GSPPTT Trigger: GGTTGTTGGTGGTGAGCCCCAGTGCTGGGCTGAAGG...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTGCCAGAGGTCCACAATaGAGACCACTCGAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITARGPQ*RPLEAH Trigger: ATGGGCCTCGAGTGGTCTTCATTGTGGACCTCTGGC...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGGCCAGAGGTCCACAATaGAGACCACTCGAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQARGPQ*RPLEAH Trigger: ATGGGCCTCGAGTGGTCTTCATTGTGGACCTCTGGC...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | TGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTCCACCAGGAGGCAGTaGCCTTCAGCCCAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: CIQCWLRRWRRGPDHHSGSTRRQ*PSAQHW Trigger: CCAGTGCTGGGCTGAAGGGCACTGCCTCCTGGTGGA...GCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTGAGAGCTTGGCGTTCTaGCCCAGCCACATTAGGATG | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITESLAF*PSHIRM Trigger: CATCCTAATGTGGCTGGGGCAGAACGCCAAGCTCTC...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGACAAAGTCGAGAGCTTaGCGTTCTGCCCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQTKSRA*RSAPAT Trigger: TGTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGT...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGTCAGGGGATCCATTATaGGCCACTGTGTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQSGDPL*ATVCRK Trigger: CTTCCTGCACACAGTGGCTCATAATGGATCCCCTGA...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCCCCTTGGGCCAGTCTaGGAACATACATCAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITPLGPV*EHTSGI Trigger: TATGCCTGATGTATGTTCTCAGACTGGCCCAAGGGG...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCCAAGCCAGGCCCGAAGCCGCCTaGTCACTAGACCTTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DAYAWLFCGRNMSPLSQARPEAA*SLDLLP Trigger: GGGCAGAAGGTCTAGTGAGCAGGCGGCTTCGGGCCT...GGCTTGGGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGAAATGGCGGGAAAGCTaGTCTGTAGGAGCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQKWRES*SVGAPR Trigger: ACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTT...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCACCCAGGAGTAACGCCTaGCATAGGCCCGAAGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSPRSNA*HRPEAA Trigger: GGCGGCTTCGGGCCTATGCCAGGCGTTACTCCTGGG...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTTCCACGTCATGCCTCTaGGCATCACGTGGTACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITSTSCL*ASRGTK Trigger: CTTTGTACCACGTGATGCCCAGAGGCATGACGTGGA...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGCGGAAAAGCCAGCATTaGCGAAGGTATTGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQRKSQH*RRYWHS Trigger: TGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCG...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGCCAGCCACATTAGGATaGCAGAGGTCCACAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQPATLG*QRSTMK Trigger: CTTCATTGTGGACCTCTGGCATCCTAATGTGGCTGG...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | TGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCGAGAGCTTGGCGTTCTaGCCCAGCCACATTAGGATG | + |
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Preference number: 4 (lower is better) Translates to: CIQCWLRRWRRGPDHHSGESLAF*PSHIRM Trigger: CATCCTAATGTGGCTGGGGCAGAACGCCAAGCTCTC...GCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTATCTTCAGGCCCAGATaGCATCTAACCCGAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GGEEVLTTTQAVRECSITIFRPR*HLTRAL Trigger: CAATGCTCGGGTTAGATGCCATCTGGGCCTGAAGAT...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCAGATCTTCAGGCCCAGATaGCATCTAACCCGAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GEEVLTTTQAVRECSITQIFRPR*HLTRAL Trigger: CAATGCTCGGGTTAGATGCCATCTGGGCCTGAAGAT...CTGAGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | ATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTACAAAGTCGAGAGCTTaGCGTTCTGCCCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: IQCWLRRWRRGPDHHSGCTKSRA*RSAPAT Trigger: TGTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGT...ACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | TCTGCTGCTGACTCTCGGGTGAGGGATGCTGAGACGCTTATGTTAAGAAGATGCCGGCAGTTGCTGGGTTaGCATCGGCCTGCTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SAADSRVRDAETLMLRRCRQLLG*HRPAWY Trigger: GTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCG...GCATCTTCTTAACATAAGCGTCTCAGCATCCCTCACCCGAGAGTCAGCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGCCCGATAGGCTCCTaGGCACCGCCGGCAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: ERIENLYSMLAEEVEKRSCPIGS*APPAVA Trigger: AGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCA...GGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | ATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTTCAGGGGATCCATTATaGGCCACTGTGTGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQCWLRRWRRGPDHHSGCSGDPL*ATVCRK Trigger: CTTCCTGCACACAGTGGCTCATAATGGATCCCCTGA...ACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAGATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCAATGCCCATGACCCCTaGCCCTCCTGTGAGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ERDAYAWLFCGRNMSPLSNAHDP*PSCEAR Trigger: TCTGGCCTCACAGGAGGGGCAGGGGTCATGGGCATT...GGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATCTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCAGACCCCAGCTCCCTaGTACCCCCAGTTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GLRICIQCWLRRWRRGPDQTPAP*YPQFST Trigger: GGTGGAGAACTGGGGGTACCAGGGAGCTGGGGTCTG...GTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACGCCAGAGGTCCACAATaGAGACCACTCGAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RICIQCWLRRWRRGPDHHARGPQ*RPLEAH Trigger: ATGGGCCTCGAGTGGTCTTCATTGTGGACCTCTGGC...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | TCTGCTGCTGACTCTCGGGTGAGGGATGCTGAGACGCTTATGTTAAGAAGATGCCAGAGGAGTAGTTCCTaGGAAGTCCCAGCTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SAADSRVRDAETLMLRRCQRSSS*EVPAHS Trigger: GCTGTGAGCTGGGACTTCTCAGGAACTACTCCTCTG...GCATCTTCTTAACATAAGCGTCTCAGCATCCCTCACCCGAGAGTCAGCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | ATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCGGAAAAGCCAGCATTaGCGAAGGTATTGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: IQCWLRRWRRGPDHHSGCRKSQH*RRYWHS Trigger: TGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCG...ACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | ATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCAGCCACATTAGGATaGCAGAGGTCCACAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQCWLRRWRRGPDHHSGCPATLG*QRSTMK Trigger: CTTCATTGTGGACCTCTGGCATCCTAATGTGGCTGG...ACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCATGGCAAGCTGCATCTTaGAGACCCCAGCTCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSWQAAS*RPQLPG Trigger: ACCAGGGAGCTGGGGTCTGCAAGATGCAGCTTGCCA...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACAGGAGCTCCACGTCATaGCTCTGGGCATCACGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RICIQCWLRRWRRGPDHHRSSTS*LWASRG Trigger: ACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCT...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | GATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCCAAGCCATCCCCAAGGCCCCTTaGGCCAGTCTGAGAACATAC | + |
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Preference number: 4 (lower is better) Translates to: DAYAWLFCGRNMSPLSQAIPKAP*ASLRTY Trigger: GTATGTTCTCAGACTGGCCCAAGGGGCCTTGGGGAT...GGCTTGGGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR TCA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACAGGTATTGGCACTCATaGAGCTCCGTAGCCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RICIQCWLRRWRRGPDHHRYWHS*SSVAPS Trigger: TGAGGGGGCTACGGAGCTTCATGAGTGCCAATACCT...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACACAAAGTCGAGAGCTTaGCGTTCTGCCCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: RICIQCWLRRWRRGPDHHTKSRA*RSAPAT Trigger: TGTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGT...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCCAAGCCCGGAAAAGCCAGCATTaGCGAAGGTATTGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: DAYAWLFCGRNMSPLSQARKSQH*RRYWHS Trigger: TGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCG...GGCTTGGGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | TCTGCTGCTGACTCTCGGGTGAGGGATGCTGAGACGCTTATGTTAAGAAGATGCATCTTCAGGCCCAGATaGCATCTAACCCGAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SAADSRVRDAETLMLRRCIFRPR*HLTRAL Trigger: CAATGCTCGGGTTAGATGCCATCTGGGCCTGAAGAT...GCATCTTCTTAACATAAGCGTCTCAGCATCCCTCACCCGAGAGTCAGCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAGATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCCCAGCCACATTAGGATaGCAGAGGTCCACAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: ERDAYAWLFCGRNMSPLSPATLG*QRSTMK Trigger: CTTCATTGTGGACCTCTGGCATCCTAATGTGGCTGG...GGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CCA 90 bp | AGGAGAGGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCGAAGTCCCGCAAAATaGCGGGAAAGCTGCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRGLRICIQCWLRRWRRGRSPAK*RESCSV Trigger: TACAGAGCAGCTTTCCCGCCATTTTGCGGGACTTCG...ACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCCTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 90 bp | GCCCCCTCAGTGCCCGATAGGCTCCTGGGCACCGCCGGCAGTTGCTaGGTTGGCATCGGCCTGCTTGGTACAGCAGGAGCTGGTAGCACC | + |
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Preference number: 5 (lower is better) Translates to: APSVPDRLLGTAGSC*VGIGLLGTAGAGST Trigger: GGTGCTACCAGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCACTGAGGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 90 bp | GTAGCCCCCTCAGTGCCCGATAGGCTCCTGGGCACCGCCGGCAGTTaGTGGGTTGGCATCGGCCTGCTTGGTACAGCAGGAGCTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAPSVPDRLLGTAGS*WVGIGLLGTAGAGS Trigger: GCTACCAGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCACTGAGGGGGCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 90 bp | GAGCTGCCCGCCTCACCCTACCCATCCCAGCCCAGGAGTAACGCCTaGCATAGGCCCGAAGCCGCCTGCTCACTAGACCTTCTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELPASPYPSQPRSNA*HRPEAACSLDLLPW Trigger: CCAGGGCAGAAGGTCTAGTGAGCAGGCGGCTTCGGGCCTATGCCAGGCGTTACTCCTGGGCTGGGATGGGTAGGGTGAGGCGGGCAGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTCATCTAACCCGAGCATaGGTGGGTCCACAGCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GGEEVLTTTQAVRECSITHLTRA*VGPQRP Trigger: GGGCCGCTGTGGACCCACCAATGCTCGGGTTAGATG...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS GCA 90 bp | AGTCCCAGCTCACAGCCCCGAAGTCCCGCAAAATGGCGGGAAAGCTaGTCTGTAGGAGCTCCACGTCATGCCTCTGGGCATCACGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: SPSSQPRSPAKWRES*SVGAPRHASGHHVV Trigger: TACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTTTGCGGGACTTCGGGGCTGTGAGCTGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 90 bp | AGGAAGGAGTCGTCCACCAGGAGGCAGTGCCCTTCAGCCCAGCACTaGGGCTCACCACCAACAACCAACTCACAACCAGGAGGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKESSTRRQCPSAQH*GSPPTTNSQPGGIF Trigger: GAAGATCCCTCCTGGTTGTGAGTTGGTTGTTGGTGGTGAGCCCCAGTGCTGGGCTGAAGGGCACTGCCTCCTGGTGGACGACTCCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTGACAAAGTCGAGAGCTaGGCGTTCTGCCCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGEEVLTTTQAVRECSITDKVES*AFCPSH Trigger: GTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGTC...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS TCA 90 bp | GCAGTAGAACGGAAAAGCCAGCATTGCCGAAGGTATTGGCACTCATaGAGCTCCGTAGCCCCCTCAGTGCCCGATAGGCTCCTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AVERKSQHCRRYWHS*SSVAPSVPDRLLGT Trigger: GGTGCCCAGGAGCCTATCGGGCACTGAGGGGGCTACGGAGCTTCATGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGTTCTACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 90 bp | TCCCGCAAAATGGCGGGAAAGCTGCTCTGTAGGAGCTCCACGTCATaGCTCTGGGCATCACGTGGTACAAAGGGGGACGAAGGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRKMAGKLLCRSSTS*LWASRGTKGDEGRS Trigger: AGACCTGCCTTCGTCCCCCTTTGTACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTTTGCGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 90 bp | GGCAGTGGCCATGGAAACATGATAGGCAAAGAGGCCCTGGCTAAGTaGCAAGCTGCATCTTGCAGACCCCAGCTCCCTGGTACCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSGHGNMIGKEALAK*QAASCRPQLPGTPS Trigger: ACTGGGGGTACCAGGGAGCTGGGGTCTGCAAGATGCAGCTTGCCACTTAGCCAGGGCCTCTTTGCCTATCATGTTTCCATGGCCACTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAGGGCACCGCCGGCAGTaGCTGGGTTGGCATCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSGHRRQ*LGWHRP Trigger: AGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCC...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 90 bp | AAAATGGCGGGAAAGCTGCTCTGTAGGAGCTCCACGTCATGCCTCTaGGCATCACGTGGTACAAAGGGGGACGAAGGCAGGTCTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KMAGKLLCRSSTSCL*ASRGTKGDEGRSGR Trigger: TCTACCAGACCTGCCTTCGTCCCCCTTTGTACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GGTGGAGAAGAGGTCCTGACCACCACTCAGGCTGTCCGTGAGTGCAGCATCACTACGGAAAAGCCAGCATaGCCGAAGGTATTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GGEEVLTTTQAVRECSITTEKPA*PKVLAL Trigger: GAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGT...AGTGATGCTGCACTCACGGACAGCCTGAGTGGTGGTCAGGACCTCTTCTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS GCA 90 bp | AAGACAAAGTCGAGAGCTTGGCGTTCTGCCCCAGCCACATTAGGATaGCAGAGGTCCACAATGAAGACCACTCGAGGCCCATCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KTKSRAWRSAPATLG*QRSTMKTTRGPSSG Trigger: CCCTGAAGATGGGCCTCGAGTGGTCTTCATTGTGGACCTCTGGCATCCTAATGTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGATGCTTATGCCTGGCTGTTTTGTGGTAGAAACATGAGCCCCTTGTCCGTGGCAAGCTGCATCTaGCAGACCCCAGCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERDAYAWLFCGRNMSPLSVASCI*QTPAPW Trigger: CCAGGGAGCTGGGGTCTGCAAGATGCAGCTTGCCAC...GGACAAGGGGCTCATGTTTCTACCACAAAACAGCCAGGCATAAGCATCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCACCGGCAGTTGCTGGGTaGGCATCGGCCTGCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSPAVAG*ASACLV Trigger: TACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGG...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCATCTAACCCGAGCATaGGTGGGTCCACAGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRICIQCWLRRWRRGPDHLTRA*VGPQRP Trigger: GGGCCGCTGTGGACCCACCAATGCTCGGGTTAGATG...GTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACGACAAAGTCGAGAGCTaGGCGTTCTGCCCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RICIQCWLRRWRRGPDHHDKVES*AFCPSH Trigger: GTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGTC...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCACAGGGCCTGCATGTCTaGGGAACCCAGTCGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSQGLHV*GTQSVA Trigger: TGCTACCGACTGGGTTCCCAAGACATGCAGGCCCTG...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACTCAACGGAAAAGCCAGCATaGCCGAAGGTATTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ICIQCWLRRWRRGPDHHSTEKPA*PKVLAL Trigger: GAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGT...TGAGTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACCACCACACGGAAAAGCCAGCATaGCCGAAGGTATTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RICIQCWLRRWRRGPDHHTEKPA*PKVLAL Trigger: GAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGT...GTGGTGGTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052937.12 ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | AGGAGAGGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTTTGGCATCGGCCTGCTaGGTACAGCAGGAGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRGLRICIQCWLRRWRRGLASAC*VQQELV Trigger: TACCAGCTCCTGCTGTACCAAGCAGGCCGATGCCAA...ACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCCTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS-3UTR CAA 90 bp | GGATTGAGAATTTGTATTCAATGCTGGCTGAGGAGGTGGAGAAGAGGTCCTGACGCATTGCCGAAGGTATaGGCACTCATGAAGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLRICIQCWLRRWRRGPDALPKV*ALMKLR Trigger: ACGGAGCTTCATGAGTGCCAATACCTTCGGCAATGC...GTCAGGACCTCTTCTCCACCTCCTCAGCCAGCATTGAATACAAATTCTCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 72 bp | TGGGCACCGCCGGCAGTTGCTGGGTTGGCATCGGCCTaGTTGGTACAGCAGGAGCTGGTAGCACCCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WAPPAVAGLASA*LVQQELVAPRG Trigger: GCCCCTGGGTGCTACCAGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CAA 90 bp | CCTCAGTGCCCGATAGGCTCCTGGGCACCGCCGGCAGTTGCTGGGTaGGCATCGGCCTGCTTGGTACAGCAGGAGCTGGTAGCACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQCPIGSWAPPAVAG*ASACLVQQELVAPR Trigger: CCTGGGTGCTACCAGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCACTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 72 bp | GTGCCCGATAGGCTCCTGGGCACCGCCGGCAGTTGCTaGGTTGGCATCGGCCTGCTTGGTACAGCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPDRLLGTAGSC*VGIGLLGTAGA Trigger: AGCTCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 72 bp | TCAGTGCCCGATAGGCTCCTGGGCACCGCCGGCAGTTaGTGGGTTGGCATCGGCCTGCTTGGTACAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVPDRLLGTAGS*WVGIGLLGTAG Trigger: TCCTGCTGTACCAAGCAGGCCGATGCCAACCCAGCAACTGCCGGCGGTGCCCAGGAGCCTATCGGGCACTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 72 bp | GCCTCACCCTACCCATCCCAGCCCAGGAGTAACGCCTaGCATAGGCCCGAAGCCGCCTGCTCACTAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASPYPSQPRSNA*HRPEAACSLDL Trigger: AAGGTCTAGTGAGCAGGCGGCTTCGGGCCTATGCCAGGCGTTACTCCTGGGCTGGGATGGGTAGGGTGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CAA 90 bp | CAACCAGGAGGGATCTTCAGGCCCAGATGGCATCTAACCCGAGCATaGGTGGGTCCACAGCGGCCCTCAAGCCGGGCCCCAGGCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPGGIFRPRWHLTRA*VGPQRPSSRAPGSR Trigger: TCTACTGCCTGGGGCCCGGCTTGAGGGCCGCTGTGGACCCACCAATGCTCGGGTTAGATGCCATCTGGGCCTGAAGATCCCTCCTGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS CAA 72 bp | CCCAGCTCGGCTCCCGGTCCCCAGGGCCTGCATGTCTaGGGAACCCAGTCGGTAGCAATACCAAAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSSAPGPQGLHV*GTQSVAIPKEQ Trigger: CTGTTCCTTTGGTATTGCTACCGACTGGGTTCCCAAGACATGCAGGCCCTGGGGACCGGGAGCCGAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 72 bp | TCGTCCACCAGGAGGCAGTGCCCTTCAGCCCAGCACTaGGGCTCACCACCAACAACCAACTCACAACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSTRRQCPSAQH*GSPPTTNSQPG Trigger: TCCTGGTTGTGAGTTGGTTGTTGGTGGTGAGCCCCAGTGCTGGGCTGAAGGGCACTGCCTCCTGGTGGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS GCA 72 bp | TCACAGCCCCGAAGTCCCGCAAAATGGCGGGAAAGCTaGTCTGTAGGAGCTCCACGTCATGCCTCTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQPRSPAKWRES*SVGAPRHASGH Trigger: ATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTTTGCGGGACTTCGGGGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 72 bp | GGAAAGCTGCTCTGTAGGAGCTCCACGTCATGCCTCTaGGCATCACGTGGTACAAAGGGGGACGAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GKLLCRSSTSCL*ASRGTKGDEGR Trigger: CCTGCCTTCGTCCCCCTTTGTACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS TCA 72 bp | CGGAAAAGCCAGCATTGCCGAAGGTATTGGCACTCATaGAGCTCCGTAGCCCCCTCAGTGCCCGATAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKSQHCRRYWHS*SSVAPSVPDRL Trigger: GAGCCTATCGGGCACTGAGGGGGCTACGGAGCTTCATGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 72 bp | TCGAGAGCTTGGCGTTCTGCCCCAGCCACATTAGGATaGCAGAGGTCCACAATGAAGACCACTCGAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRAWRSAPATLG*QRSTMKTTRGP Trigger: TGGGCCTCGAGTGGTCTTCATTGTGGACCTCTGGCATCCTAATGTGGCTGGGGCAGAACGCCAAGCTCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS GCA 72 bp | ATGGCGGGAAAGCTGCTCTGTAGGAGCTCCACGTCATaGCTCTGGGCATCACGTGGTACAAAGGGGGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: MAGKLLCRSSTS*LWASRGTKGDE Trigger: TTCGTCCCCCTTTGTACCACGTGATGCCCAGAGGCATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CCA 72 bp | AGAAGTCCCAGCTCACAGCCCCGAAGTCCCGCAAAATaGCGGGAAAGCTGCTCTGTAGGAGCTCCACGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSPSSQPRSPAK*RESCSVGAPRH Trigger: ATGACGTGGAGCTCCTACAGAGCAGCTTTCCCGCCATTTTGCGGGACTTCGGGGCTGTGAGCTGGGACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CAA 72 bp | CTGCCCTGGGTCCTTCTCCAGAATCCCCAAGGCCCCTaGGGCCAGTCTGAGAACATACATCAGGCATACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPWVLLQNPQGP*GQSENIHQAYH Trigger: GTGGTATGCCTGATGTATGTTCTCAGACTGGCCCAAGGGGCCTTGGGGATTCTGGAGAAGGACCCAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CAA 72 bp | AGCCGGGCCCCAGGCAGTAGAACGGAAAAGCCAGCATaGCCGAAGGTATTGGCACTCATGAAGCTCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRAPGSRTEKPA*PKVLALMKLRS Trigger: GCTACGGAGCTTCATGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGTTCTACTGCCTGGGGCCCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS CAA 72 bp | GGCAGTAGAACGGAAAAGCCAGCATTGCCGAAGGTATaGGCACTCATGAAGCTCCGTAGCCCCCTCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRTEKPALPKV*ALMKLRSPLSA Trigger: GGCACTGAGGGGGCTACGGAGCTTCATGAGTGCCAATACCTTCGGCAATGCTGGCTTTTCCGTTCTACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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| CDS GCA 72 bp | GTCTGGAGCGAAGACAAAGTCGAGAGCTTGGCGTTCTaGCCCAGCCACATTAGGATGCCAGAGGTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: VWSEDKVESLAF*PSHIRMPEVHN Trigger: ATTGTGGACCTCTGGCATCCTAATGTGGCTGGGGCAGAACGCCAAGCTCTCGACTTTGTCTTCGCTCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052937.12 ENSMUST00000106339.2 ENSMUST00000106340.8 |
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| CDS CCA 72 bp | CATGGAAACATGATAGGCAAAGAGGCCCTGGCTAAGTaGCAAGCTGCATCTTGCAGACCCCAGCTCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HGNMIGKEALAK*QAASCRPQLPG Trigger: ACCAGGGAGCTGGGGTCTGCAAGATGCAGCTTGCCACTTAGCCAGGGCCTCTTTGCCTATCATGTTTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106340.8 |
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