Pregenerated sensors for ASPH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028207Ensembl transcript IDs: ENSMUST00000038564.13, ENSMUST00000078139.13, ENSMUST00000084912.12, ENSMUST00000084915.11, ENSMUST00000098275.9, ENSMUST00000103004.10, ENSMUST00000108333.8, ENSMUST00000108334.8, ENSMUST00000108335.8, ENSMUST00000108337.8, ENSMUST00000108339.8, ENSMUST00000108340.9, ENSMUST00000131605.2, ENSMUST00000146441.8, ENSMUST00000152526.8
Found 551 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAAGCCTGTGCAACTGACCTACAGACACTCTGTGTGCTCTGCTTaGCATGAGGTCCTCCATCCCAGTCCCAGCCATGACTGTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SKPVQLTYRHSVCSA*HEVLHPSPSHDCQQ Trigger: TTGCTGACAGTCATGGCTGGGACTGGGATGGAGGACCTCATGTCAAGCAGAGCACACAGAGTGTCTGTAGGTCAGTTGCACAGGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR CCA 90 bp | AGAGGTCTCCAGCTGCATGGCACGGGGATGAAGAGTCATGGTACTTaGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RGLQLHGTGMKSHGT*TSISTPKRNQKGSL Trigger: GAGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGACTCTTCATCCCCGTGCCATGCAGCTGGAGACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR TCA 90 bp | GGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATGCTTaGCCACCTAGGATGCTAGCATCCCTGGGCACTTTCTATGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GRKMEKHCKFIIKDA*PPRMLASLGTFYAA Trigger: AGCAGCATAGAAAGTGCCCAGGGATGCTAGCATCCTAGGTGGTCAAGCATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR GCA 90 bp | CTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTaGCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTCATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LIWIIFPVGAIPDFL*PLAANWSEEGESFL Trigger: CAGAAATGACTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| 3UTR TCA 90 bp | CAAAGGGGAGGATATTTTATCTGTGCCATGTTTCCTGAGACCAGCTaGGTATGTGTAGATACCTTATTCTCTAGCATCTGTACGACACAG | + |
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Preference number: 1 (lower is better) Translates to: QRGGYFICAMFPETS*VCVDTLFSSICTTQ Trigger: CTGTGTCGTACAGATGCTAGAGAATAAGGTATCTACACATACTCAGCTGGTCTCAGGAAACATGGCACAGATAAAATATCCTCCCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR CCA 90 bp | TCGCTTACAGAAGTCACAGTGCTAATTAATACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAACAGTGCCCATAAACATCAGTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: SLTEVTVLINTRCPQ*LQVPINSAHKHQFN Trigger: GTTGAACTGATGTTTATGGGCACTGTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGTATTAATTAGCACTGTGACTTCTGTAAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR GCA 90 bp | AAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATaGAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCATTCT | + |
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Preference number: 1 (lower is better) Translates to: KDGSACKYQAKEDQE*KMKCQRPAYFLIHS Trigger: AGAATGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR GCA 90 bp | AATGCTTTACTAATGATCATCTTGAGGAGCAAGATGGCTTTCTACTaGTCTTTCTCAGCCATGGATAGCACTCAAATCAAACATGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: NALLMIILRSKMAFY*SFSAMDSTQIKHAC Trigger: ACAGGCATGTTTGATTTGAGTGCTATCCATGGCTGAGAAAGAGCAGTAGAAAGCCATCTTGCTCCTCAAGATGATCATTAGTAAAGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR TCA 90 bp | AACAGTGAACCACACAAGTACCGCAGTGAAGCCAACGTCTTTGGATaGTTCACAGTCCATACAGCTAACATAAATAAAAGCATTTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: NSEPHKYRSEANVFG*FTVHTANINKSIWK Trigger: TTTCCAAATGCTTTTATTTATGTTAGCTGTATGGACTGTGAATCATCCAAAGACGTTGGCTTCACTGCGGTACTTGTGTGGTTCACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
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| 3UTR TCA 90 bp | AGAAACCAATTATACTACCAAGAACATCATTTCCAATGCACTTTGTaGACAGCTATAGGAATGAGGAATACCACTTCCTTTCTGGGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: RNQLYYQEHHFQCTL*TAIGMRNTTSFLGV Trigger: CACACCCAGAAAGGAAGTGGTATTCCTCATTCCTATAGCTGTTCACAAAGTGCATTGGAAATGATGTTCTTGGTAGTATAATTGGTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
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| 3UTR GCA 90 bp | TTATTGCTTATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTaGACTGTGGTCACAATGTTCAATCATAAAACTTACTCTGATTTT | + |
|
Preference number: 1 (lower is better) Translates to: LLLIDLTEVPAGGHQ*TVVTMFNHKTYSDF Trigger: AAAATCAGAGTAAGTTTTATGATTGAACATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAATAAGCAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR CCA 90 bp | TTGATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTaGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: LIHRIYLLSTNKHIQ*LIWIIFPVGAIPDF Trigger: GAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| 3UTR CCA 90 bp | ATTTGCAAAGTTTTTCATTTAAATCTCTCTCCTACAAGAATGATTTaGACATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAAT | + |
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Preference number: 1 (lower is better) Translates to: ICKVFHLNLSPTRMI*TSCCLSDHQLTFMN Trigger: ATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGATGTCCAAATCATTCTTGTAGGAGAGAGATTTAAATGAAAAACTTTGCAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAGAGGCCAGGCTACCTaGGTCCCTGACCCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSRGQAT*VPDPEQ Trigger: CTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACACAGCAGGCAGGAACTaGAGACTCCAGGCCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHTAGRN*RLQALG Trigger: ACCCAAGGCCTGGAGTCTGCAGTTCCTGCCTGCTGT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTAGAGGCCAGGCTACCTaGGTCCCTGACCCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LCVAGIPAISAAMLFDWLRGQAT*VPDPEQ Trigger: CTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCT...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCACAGCAGGCAGGAACTaGAGACTCCAGGCCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSTAGRN*RLQALG Trigger: ACCCAAGGCCTGGAGTCTGCAGTTCCTGCCTGCTGT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCGAAAGGCAGCCTCCCTaGAGAGCAACCAAGTCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSERQPP*RATKSA Trigger: CGCAGACTTGGTTGCTCTCCAGGGAGGCTGCCTTTC...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAGAGGCCAGGCTACCTaGGTCCCTGACCCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRNGSQPPCIGSQTENSKRGQAT*VPDPEQ Trigger: CTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTTTTTGGGCACTGCTTaGAAGGCACACATCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHFLGTA*KAHISV Trigger: CACAGAGATGTGTGCCTTTCAAGCAGTGCCCAAAAA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATCCAGGGCCTAACCCCTaGGCCCTGAGCTACAAACTA | + |
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Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNPGPNP*ALSYKL Trigger: TAGTTTGTAGCTCAGGGCTCAGGGGTTAGGCCCTGG...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTGGAGCGTATTAGTCTaGTCCTCCTGTGGTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMWSVLV*SSCGSG Trigger: CCCACTACCACAGGAGGACCAGACTAATACGCTCCA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATGAAAGGCAGCCTCCCTaGAGAGCAACCAAGTCTGCG | + |
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Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNERQPP*RATKSA Trigger: CGCAGACTTGGTTGCTCTCCAGGGAGGCTGCCTTTC...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAACTACAATGACTCTGAGAAGATGACTAAAGACTCCTCAGTCACTACGAGCTTGGGGAAGCCCTaGCCCATGAGTGGCACATGG | + |
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Preference number: 2 (lower is better) Translates to: LENYNDSEKMTKDSSVTTSLGKP*PMSGTW Trigger: CCATGTGCCACTCATGGGCCAGGGCTTCCCCAAGCT...CGTAGTGACTGAGGAGTCTTTAGTCATCTTCTCAGAGTCATTGTAGTTCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTTTTTGGGCACTGCTTaGAAGGCACACATCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSFLGTA*KAHISV Trigger: CACAGAGATGTGTGCCTTTCAAGCAGTGCCCAAAAA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCCGAGGGTTACTACATaGACACTGGATTGTATTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSPRVTT*TLDCIA Trigger: GGCAATACAATCCAGTGTTCATGTAGTAACCCTCGG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAATGCTGTTGGAGTaGACCACTGCCAACACTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSKMLLE*TTANTC Trigger: GCAAGTGTTGGCAGTGGTGCACTCCAACAGCATTTT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTGGAGCGTATTAGTCTaGTCCTCCTGTGGTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KNISTDMHNPYPLSIPGPWSVLV*SSCGSG Trigger: CCCACTACCACAGGAGGACCAGACTAATACGCTCCA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: MAGGSPQTTCQLAVFFANTRCPQ*LQVPIN Trigger: GTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGT...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGATCAAGAGCTGCCCCTaGCCCACAAAAGAAATAGCC | + |
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Preference number: 2 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMIKSCP*PTKEIA Trigger: GGCTATTTCTTTTGTGGGCCAGGGGCAGCTCTTGAT...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACGGGGATGAAGAGTCATaGTACTTGGACTTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHGDEES*YLDFYL Trigger: GAGATAGAAGTCCAAGTACCATGACTCTTCATCCCC...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCTGAACAGGCTCTCGGTTTATCCTTATTGTTTATGTAATGAAAGGAAGAGGGAAGACCCTGCCTaGCTGAGTCCCTCGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SGLNRLSVYPYCLCNERKREDPA*LSPSLH Trigger: GTGCAGCGAGGGACTCAGCCAGGCAGGGTCTTCCCT...CTTCCTTTCATTACATAAACAATAAGGATAAACCGAGAGCCTGTTCAGCCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCTGAACAGGCTCTCGGTTTATCCTTATTGTTTATGTAATGAAAGGAAGAGCCTGGGGCTGCCATaGGCAAGCTGGGAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGLNRLSVYPYCLCNERKSLGLP*ASWEQE Trigger: TTCCTGCTCCCAGCTTGCCCATGGCAGCCCCAGGCT...CTTCCTTTCATTACATAAACAATAAGGATAAACCGAGAGCCTGTTCAGCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
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| 3UTR-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATTGCATGGCACGGGGATaGAGAGTCATGGTACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNCMARG*RVMVLG Trigger: TCCAAGTACCATGACTCTTCATCCCCGTGCCATGCA...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACAAGAGGCCTTCTTTTTaGCACGTAAGTGGATCTACA | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHKRPSF*HVSGST Trigger: TGTAGATCCACTTACGTGTCAAAAAGAAGGCCTCTT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR TCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAACCAGGGCCTAACCCCTaGGCCCTGAGCTACAAACTA | + |
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Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKPGPNP*ALSYKL Trigger: TAGTTTGTAGCTCAGGGCTCAGGGGTTAGGCCCTGG...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGACCATAATCAAGAGCTaGCCCTGGCCCACAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMTIIKS*PWPTKE Trigger: TTCTTTTGTGGGCCAGGGGCAGCTCTTGATTATGGT...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACAAGATGGCTTTCTACTaGTCTTTCTCAGCCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHKMAFY*SFSAMD Trigger: ATCCATGGCTGAGAAAGAGCAGTAGAAAGCCATCTT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMTRCPQ*LQVPIN Trigger: GTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGT...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTTTTTGACACGTAAGTaGATCTACAGCAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHFLTRK*IYSRQE Trigger: TTCCTGCCTGCTGTAGATCCACTTACGTGTCAAAAA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCTGAGGGGAGGAAGATaGAAAAGCACTGCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLRGGR*KSTANS Trigger: TGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTACTTAAAATGCTGTTaGAGTGCACCACTGCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHYLKCC*SAPLPT Trigger: TGTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAGAGGCCTTCTTTTTaGCACGTAAGTGGATCTACA | + |
|
Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSKRPSF*HVSGST Trigger: TGTAGATCCACTTACGTGTCAAAAAGAAGGCCTCTT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTACCATAATCAAGAGCTaGCCCTGGCCCACAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKATIIKS*PWPTKE Trigger: TTCTTTTGTGGGCCAGGGGCAGCTCTTGATTATGGT...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATGTCCCTTTGTCCCCATaGTCCTATTACCTGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNVPLSP*SYYLWR Trigger: TCTCCACAGGTAATAGGAGCATGGGGACAAAGGGAC...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCTGGAGCGTATTAGTCTaGTCCTCCTGTGGTAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSWSVLV*SSCGSG Trigger: CCCACTACCACAGGAGGACCAGACTAATACGCTCCA...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKATRCPQ*LQVPIN Trigger: GTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGT...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAAC | + |
|
Preference number: 2 (lower is better) Translates to: KNISTDMHNPYPLSIPGPTRCPQ*LQVPIN Trigger: GTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGT...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTGTTTAAATGGCCGGTaGCTCTCCTCAAACCACATG | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKACLNGR*LSSNHM Trigger: CATGTGGTTTGAGGAGAGCCACCGGCCATTTAAACA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTACTTAAAATGCTGTTaGAGTGCACCACTGCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSYLKCC*SAPLPT Trigger: TGTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CAA 90 bp | CCTTCCTCTCTTGTTAGATCTCAGTCTGTGGTAGAAGCTGGGACCTaGAAACATGAAGAGAAAGGAGAAAATGAGAACACCCAGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: PSSLVRSQSVVEAGT*KHEEKGENENTQPL Trigger: CAGTGGCTGGGTGTTCTCATTTTCTCCTTTCTCTTCATGTTTCAAGGTCCCAGCTTCTACCACAGACTGAGATCTAACAAGAGAGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAGTCTCCCTCCAATGCTaGAGATCAAACCCAGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARVSLQC*RSNPGP Trigger: AGGCCCTGGGTTTGATCTTCAGCATTGGAGGGAGAC...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAACAGCAGGCAGGAACTaGAGACTCCAGGCCTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: IVLLVRPSADFHELLFKTTAGRN*RLQALG Trigger: ACCCAAGGCCTGGAGTCTGCAGTTCCTGCCTGCTGT...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAGGATCCCAGCCCCCATaGATAGGAAGTCAGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARGSQPP*IGSQTE Trigger: CTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCC...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATGGAGCGTATTAGTCTaGTCCTCCTGTGGTAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SEVGHNEPSLPRVLKQITWSVLV*SSCGSG Trigger: CCCACTACCACAGGAGGACCAGACTAATACGCTCCA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTATCACAGCCATCTTTTaGAGCGTATTAGTCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKAITAIF*SVLVWS Trigger: GGACCAGACTAATACGCTCCAAAAGATGGCTGTGAT...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAGGGGATGAAGAGTCATaGTACTTGGACTTCTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTGDEES*YLDFYL Trigger: GAGATAGAAGTCCAAGTACCATGACTCTTCATCCCC...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGGGGATGAAGAGTCATaGTACTTGGACTTCTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWGDEES*YLDFYL Trigger: GAGATAGAAGTCCAAGTACCATGACTCTTCATCCCC...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTGAGGGGAGGAAGATaGAAAAGCACTGCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLRGGR*KSTANS Trigger: TGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATTAGTGTCTGAATTCAGAAACTTCACTGCCCTAAGGCAAAAACATAGGATTCTTCCTTTCTGGGTGTaGAGGGAGCCAAGCGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLVSEFRNFTALRQKHRILPFWV*REPSEG Trigger: CCCCTCGCTTGGCTCCCTCCACACCCAGAAAGGAAG...AATCCTATGTTTTTGCCTTAGGGCAGTGAAGTTTCTGAATTCAGACACTAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTAAAAAGAAACCCAACTaGGCCACAGATGCTCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKAKKKPN*ATDALK Trigger: TTTGAGAGCATCTGTGGCTCAGTTGGGTTTCTTTTT...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATGCATGGCACGGGGATaGAGAGTCATGGTACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARCMARG*RVMVLG Trigger: TCCAAGTACCATGACTCTTCATCCCCGTGCCATGCA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAATTTCACTTCCATGTaGTATTTTCTCTCCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSNFTSM*YFLSKL Trigger: GAGCTTGGAGAGAAAATATCACATGGAAGTGAAATT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAAGAGGCCTTCTTTTTaGCACGTAAGTGGATCTACA | + |
|
Preference number: 2 (lower is better) Translates to: LRNGSQPPCIGSQTENSKKRPSF*HVSGST Trigger: TGTAGATCCACTTACGTGTCAAAAAGAAGGCCTCTT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAGTCTCCCTCCAATGCTaGAGATCAAACCCAGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: IVLLVRPSADFHELLFKTVSLQC*RSNPGP Trigger: AGGCCCTGGGTTTGATCTTCAGCATTGGAGGGAGAC...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAATCAAGAGCTGCCCCTaGCCCACAAAAGAAATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SEVGHNEPSLPRVLKQITIKSCP*PTKEIA Trigger: GGCTATTTCTTTTGTGGGCCAGGGGCAGCTCTTGAT...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACAACAATGAGAACACATaGTTTGCATTTCGCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSYYLWRKALRGQAFKSHNNENT*FAFRYV Trigger: TACATAGCGAAATGCAAACCATGTGTTCTCATTGTT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CAA 90 bp | ACACATCTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTaGTTCGACTGGCTTAGAGATCAGTGCATGAATGTCATTACATTC | + |
|
Preference number: 2 (lower is better) Translates to: THLCVAGIPAISAAM*FDWLRDQCMNVITF Trigger: GAATGTAATGACATTCATGCACTGATCTCTAAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAGATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAACCGAGGGTTACTACATaGACACTGGATTGTATTGCC | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKPRVTT*TLDCIA Trigger: GGCAATACAATCCAGTGTTCATGTAGTAACCCTCGG...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAGTATATCCTCCATGTaGATTGATGTAGACACTATT | + |
|
Preference number: 2 (lower is better) Translates to: LLRNGSQPPCIGSQTENSSISSM*IDVDTI Trigger: AATAGTGTCTACATCAATGCACATGGAGGATATACT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATAAGATGGCTTTCTACTaGTCTTTCTCAGCCATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNKMAFY*SFSAMD Trigger: ATCCATGGCTGAGAAAGAGCAGTAGAAAGCCATCTT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATAATACCAGCCATTTCTaGAGCAATGTTGTTCGACTG | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNNTSHF*SNVVRL Trigger: CAGTCGAACAACATTGCTGCAGAAATGGCTGGTATT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAAAAATGCTGTTGGAGTaGACCACTGCCAACACTTGC | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKKMLLE*TTANTC Trigger: GCAAGTGTTGGCAGTGGTGCACTCCAACAGCATTTT...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCACTTCCCAGAGTTTTaGAACAGATTACATACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SDNPPLLHSMAHICRDKAHFPEF*NRLHTE Trigger: TTCTGTATGTAATCTGTTTCAAAACTCTGGGAAGTG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATATCCTCCATGTGCATTaGTGTAGACACTATTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNILHVH*CRHYSM Trigger: CATAGAATAGTGTCTACATCAATGCACATGGAGGAT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAATTTCACTTCCATGTaGTATTTTCTCTCCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LRNGSQPPCIGSQTENSKNFTSM*YFLSKL Trigger: GAGCTTGGAGAGAAAATATCACATGGAAGTGAAATT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAAAAAAGAAACCCAACTaGGCCACAGATGCTCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SEVGHNEPSLPRVLKQITKKKPN*ATDALK Trigger: TTTGAGAGCATCTGTGGCTCAGTTGGGTTTCTTTTT...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAGAATGCAAGATGAAATaGCAAAGACCAGCCTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKECKMK*QRPAYF Trigger: GAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTC...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATAAAGAGGACCAAGAATaGAAGATGAAATGCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNKEDQE*KMKCQR Trigger: TCTTTGGCATTTCATCTTGCATTCTTGGTCCTCTTT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATTTTTGACACGTAAGTaGATCTACAGCAGGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKFLTRK*IYSRQE Trigger: TTCCTGCCTGCTGTAGATCCACTTACGTGTCAAAAA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAACAATGAGAACACATaGTTTGCATTTCGCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: LRNGSQPPCIGSQTENSKNNENT*FAFRYV Trigger: TACATAGCGAAATGCAAACCATGTGTTCTCATTGTT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAGAAGTTCAGAGAAACTaGTTTCAGCCATTTACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SEVGHNEPSLPRVLKQITEVQRN*FQPFTS Trigger: ACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTC...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGATCCCAGATTTCCTCTaGCCTTTAGCAGCGAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWIPDFL*PLAANW Trigger: CCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGAT...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| 3UTR-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATCACAACCAAGTTTTCTaGCCCTTAAATGCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDHNQVF*PLNAGT Trigger: AGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAAATACCAGCCATTTCTaGAGCAATGTTGTTCGACTG | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARNTSHF*SNVVRL Trigger: CAGTCGAACAACATTGCTGCAGAAATGGCTGGTATT...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAGACATCAGTGCACTGTaGTCACAATGTTCAATCATA | + |
|
Preference number: 2 (lower is better) Translates to: SEVGHNEPSLPRVLKQITDISAL*SQCSII Trigger: TATGATTGAACATTGTGACCACAGTGCACTGATGTC...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACACTGAGGGGAGGAAGATaGAAAAGCACTGCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: IVLLVRPSADFHELLFKTLRGGR*KSTANS Trigger: TGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAG...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATTTACTACATGAACACTaGATTGTATTGCCTTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RHISKFNVVLNPSSSSSNLLHEH*IVLPLS Trigger: TGACAAAGGCAATACAATCCAGTGTTCATGTAGTAA...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CAA 90 bp | AAAGTATCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTaGAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KVSEVGHNEPSLPRV*KQITYRSSEKLISA Trigger: GGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGATACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAATCCTCCATGTGCATTaGTGTAGACACTATTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARILHVH*CRHYSM Trigger: CATAGAATAGTGTCTACATCAATGCACATGGAGGAT...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGAATTTCACTTCCATGTaGTATTTTCTCTCCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLNFTSM*YFLSKL Trigger: GAGCTTGGAGAGAAAATATCACATGGAAGTGAAATT...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAACCATAATCAAGAGCTaGCCCTGGCCCACAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ETDYIQKFRETDFSHLPVTIIKS*PWPTKE Trigger: TTCTTTTGTGGGCCAGGGGCAGCTCTTGATTATGGT...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAGAATGCAAGATGAAATaGCAAAGACCAGCCTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: IVLLVRPSADFHELLFKTECKMK*QRPAYF Trigger: GAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTC...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAAGTATATCCTCCATGTaGATTGATGTAGACACTATT | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKSISSM*IDVDTI Trigger: AATAGTGTCTACATCAATGCACATGGAGGATATACT...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAAACAGAGTTAAAATGTaGAGACACATCAGCAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CIYITLKTHTGTLSRFCKNRVKM*RHISKF Trigger: AAACTTGCTGATGTGTCTGCACATTTTAACTCTGTT...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAAAAAAGAAACCCAACTaGGCCACAGATGCTCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ETDYIQKFRETDFSHLPVKKKPN*ATDALK Trigger: TTTGAGAGCATCTGTGGCTCAGTTGGGTTTCTTTTT...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATTACTACATGAACACTaGATTGTATTGCCTTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LRMDQHVSTKLKRTKNARLLHEH*IVLPLS Trigger: TGACAAAGGCAATACAATCCAGTGTTCATGTAGTAA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAGACATCAGTGCACTGTaGTCACAATGTTCAATCATA | + |
|
Preference number: 2 (lower is better) Translates to: ETDYIQKFRETDFSHLPVDISAL*SQCSII Trigger: TATGATTGAACATTGTGACCACAGTGCACTGATGTC...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAAACAATGAGAACACATaGTTTGCATTTCGCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: IVLLVRPSADFHELLFKTNNENT*FAFRYV Trigger: TACATAGCGAAATGCAAACCATGTGTTCTCATTGTT...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | CACTGCTGGCTCTGGACTGAGCCAGCCAGCATCATGTaGCATCTCCAGTGGAGCAACCGTCCAGCAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HCWLWTEPASIM*HLQWSNRPASL Trigger: CAGGCTTGCTGGACGGTTGCTCCACTGGAGATGTCACATGATGCTGGCTGGCTCAGTCCAGAGCCAGCAGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACACCCAAGGGCAAGTGTaGGCACAGTTCATGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSYYLWRKALRGQAFKSHTQGQV*AQFMHP Trigger: AGGATGCATGAACTGTGCCAACACTTGCCCTTGGGT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | GGAACCTTAGAGGTCTCCAGCTGCATGGCACGGGGATaGAGAGTCATGGTACTTGGACTTCTATCTCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GTLEVSSCMARG*RVMVLGLLSPH Trigger: GTGTGGAGATAGAAGTCCAAGTACCATGACTCTTCATCCCCGTGCCATGCAGCTGGAGACCTCTAAGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGGAAGAGGCTCATCCCTaGGACCCAGCAGCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMEEAHP*DPAANS Trigger: AGAGTTTGCTGCTGGGTCCAAGGGATGAGCCTCTTC...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTTGCAGACTCCAGGCCTaGGGTATAGAAGGCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCVAGIPAISAAMLFDWLCRLQA*GIEGKE Trigger: CTCTTTGCCTTCTATACCCAAGGCCTGGAGTCTGCA...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | CTAACAACCATTGAAGCTTGGGGAAGCCCTGGCCCATaGGTGGCACATGGAACCATGTACAAGAGTAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTTIEAWGSPGP*VAHGTMYKSSD Trigger: GTCACTACTCTTGTACATGGTTCCATGTGCCACTCATGGGCCAGGGCTTCCCCAAGCTTCAATGGTTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| 3UTR GCA 72 bp | ATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTaGCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IIFPVGAIPDFL*PLAANWSEEGE Trigger: CTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| 3UTR CCA 72 bp | AGGTCTCCAGCTGCATGGCACGGGGATGAAGAGTCATaGTACTTGGACTTCTATCTCCACACCCAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSPAAWHGDEES*YLDFYLHTQKE Trigger: TTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGACTCTTCATCCCCGTGCCATGCAGCTGGAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAACCCAAGGGCAAGTGTaGGCACAGTTCATGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRNGSQPPCIGSQTENSKTQGQV*AQFMHP Trigger: AGGATGCATGAACTGTGCCAACACTTGCCCTTGGGT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CCA 72 bp | TGGGCACTGCTTGAAAGGCACACATCTCTGTGTGGCTaGAATACCAGCCATTTCTGCAGCAATGTTGTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: WALLERHTSLCG*NTSHFCSNVVR Trigger: TCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAGATGTGTGCCTTTCAAGCAGTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATACCCAAGGGCAAGTGTaGGCACAGTTCATGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RHISKFNVVLNPSSSSSNTQGQV*AQFMHP Trigger: AGGATGCATGAACTGTGCCAACACTTGCCCTTGGGT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | ATTAGCACAGAGAAAGGGGGAGACACTGAGTCTAAATaGGGATACACAGGTAGACCCAAGGGCAAGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISTEKGGDTESK*GYTGRPKGKCW Trigger: CCAACACTTGCCCTTGGGTCTACCTGTGTATCCTCATTTAGACTCAGTGTCTCCCCCTTTCTCTGTGCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | GTGAAGAGACTCTCAGAGACTAAGAGGCCTTCTTTTTaGCACGTAAGTGGATCTACAGCAGGCAGGAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VKRLSETKRPSF*HVSGSTAGRNC Trigger: GCAGTTCCTGCCTGCTGTAGATCCACTTACGTGTCAAAAAGAAGGCCTCTTAGTCTCTGAGAGTCTCTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR GCA 72 bp | TTATCCATTCTCCTTAGAAATGGATCCCAGCCCCCATaGATAGGAAGTCAGACAGAGAACAGCAAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSILLRNGSQPP*IGSQTENSKGE Trigger: CTCCCCTTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAGAATGGATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTATCACAGCCATCTTTaGGAGCGTATTAGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMYHSHL*ERISLV Trigger: GACCAGACTAATACGCTCCAAAAGATGGCTGTGATA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTGTAGAAAAATATCTTaGGCCAGCCATGTAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSYYLWRKALRGQAFKSHCRKIS*ASHVDN Trigger: GTTGTCTACATGGCTGGCCAAAGATATTTTTCTACA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTTACTAATGATCATCTaGAGGAGCAAGATGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CSYYLWRKALRGQAFKSHLLMII*RSKMAF Trigger: GAAAGCCATCTTGCTCCTCAAGATGATCATTAGTAA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACGTTTTAGAGGAATTTTaGAACACTGGCAAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSYYLWRKALRGQAFKSHVLEEF*NTGKGR Trigger: CCTTCCTTTGCCAGTGTTCAAAAATTCCTCTAAAAC...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTATCACAGCCATCTTTaGGAGCGTATTAGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KNISTDMHNPYPLSIPGPYHSHL*ERISLV Trigger: GACCAGACTAATACGCTCCAAAAGATGGCTGTGATA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGTGCAGACTCCAGGCCTaGGGTATAGAAGGCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLCRLQA*GIEGKE Trigger: CTCTTTGCCTTCTATACCCAAGGCCTGGAGTCTGCA...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCGAATTTGGTAAGGATTaGATATTTCCCCTCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLRNGSQPPCIGSQTENSEFGKD*IFPLMP Trigger: AGGCATGAGGGGAAATATCAAATCCTTACCAAATTC...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTGGATTGTATTGCCTTaGTCAGTAAGTTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLRNGSQPPCIGSQTENSWIVLP*SVSSSV Trigger: AACAGAGGAACTTACTGACAAAGGCAATACAATCCA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACATGAGAACACATGGTTaGCATTTCGCTATGTATATG | + |
|
Preference number: 3 (lower is better) Translates to: CSYYLWRKALRGQAFKSHMRTHG*HFAMYM Trigger: CATATACATAGCGAAATGCAAACCATGTGTTCTCAT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CCA 72 bp | GGAGCAAGATGGCTTTCTACTGCTCTTTCTCAGCCATaGATAGCACTCAAATCAAACATGCCTGTCAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: GARWLSTALSQP*IALKSNMPVNA Trigger: AGCGTTGACAGGCATGTTTGATTTGAGTGCTATCCATGGCTGAGAAAGAGCAGTAGAAAGCCATCTTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCAGTACTTAAAATGCTGTaGGAGTGCACCACTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPVLKML*ECTTAN Trigger: GTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTAC...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | ATGGAAAAGCACTGCAAATTCATAATCAAGGATGCTTaGCCACCTAGGATGCTAGCATCCCTGGGCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MEKHCKFIIKDA*PPRMLASLGTF Trigger: GAAAGTGCCCAGGGATGCTAGCATCCTAGGTGGTCAAGCATCCTTGATTATGAATTTGCAGTGCTTTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR GCA 72 bp | CAACGTGGGATCCAAGTACTTAAAATGCTGTTGGAGTaGACCACTGCCAACACTTGCAAAAGTAACGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: QRGIQVLKMLLE*TTANTCKSNGT Trigger: AGTACCGTTACTTTTGCAAGTGTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTACTTGGATCCCACGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCCCAAAGATCTTGATTaGCCAGTAACTACATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SDNPPLLHSMAHICRDKAPKDLD*PVTTSQ Trigger: TTGTGATGTAGTTACTGGCAAATCAAGATCTTTGGG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATTGCAGACTCCAGGCCTaGGGTATAGAAGGCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDCRLQA*GIEGKE Trigger: CTCTTTGCCTTCTATACCCAAGGCCTGGAGTCTGCA...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CCA 72 bp | AACCCAGCAGGTAACCGAGGGTTACTACATGAACACTaGATTGTATTGCCTTTGTCAGTAAGTTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NPAGNRGLLHEH*IVLPLSVSSSV Trigger: AACAGAGGAACTTACTGACAAAGGCAATACAATCCAGTGTTCATGTAGTAACCCTCGGTTACCTGCTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CCA 72 bp | AAGATCAACGTGGGATCCAAGTACTTAAAATGCTGTTaGAGTGCACCACTGCCAACACTTGCAAAAGTAACG | + |
|
Preference number: 3 (lower is better) Translates to: KINVGSKYLKCC*SAPLPTLAKVT Trigger: CGTTACTTTTGCAAGTGTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTACTTGGATCCCACGTTGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATATCACAGCCATCTTTaGGAGCGTATTAGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SEVGHNEPSLPRVLKQITYHSHL*ERISLV Trigger: GACCAGACTAATACGCTCCAAAAGATGGCTGTGATA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAGAAGAGGCTCATCCCTaGGACCCAGCAGCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ETDYIQKFRETDFSHLPVEEAHP*DPAANS Trigger: AGAGTTTGCTGCTGGGTCCAAGGGATGAGCCTCTTC...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTCACTTCCCAGAGTTTaGAAACAGATTACATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SDNPPLLHSMAHICRDKASLPRV*KQITYR Trigger: TCTGTATGTAATCTGTTTCAAAACTCTGGGAAGTGA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATTTCCCCTCATGCCTTaGCCATCTGTTTTAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CIYITLKTHTGTLSRFCKFPLMP*PSVLEE Trigger: TTCCTCTAAAACAGATGGCAAAGGCATGAGGGGAAA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAATGAGAACACATGGTTaGCATTTCGCTATGTATATG | + |
|
Preference number: 3 (lower is better) Translates to: LRNGSQPPCIGSQTENSKMRTHG*HFAMYM Trigger: CATATACATAGCGAAATGCAAACCATGTGTTCTCAT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | GCAAAGGGGAGGATATTTTATCTGTGCCATGTTTCCTaGGACCAGCTGAGTATGTGTAGATACCTTATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AKGRIFYLCHVS*DQLSMCRYLIL Trigger: GAGAATAAGGTATCTACACATACTCAGCTGGTCTCAGGAAACATGGCACAGATAAAATATCCTCCCCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR GCA 72 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTaGACTGTGGTCACAATGTTCAATCATAAAACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IDLTEVPAGGHQ*TVVTMFNHKTY Trigger: GTAAGTTTTATGATTGAACATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR CCA 72 bp | GAAGTCACAGTGCTAATTAATACAAGGTGCCCACAATaGCTTCAAGTCCCCATTAACAGTGCCCATAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: EVTVLINTRCPQ*LQVPINSAHKH Trigger: ATGTTTATGGGCACTGTTAATGGGGACTTGAAGCCATTGTGGGCACCTTGTATTAATTAGCACTGTGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR CCA 72 bp | GGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTaGCTTAGAGATCAGTGCATGAATGTCATTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: GIPAISAAMLFD*LRDQCMNVITF Trigger: GAATGTAATGACATTCATGCACTGATCTCTAAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATTTCCCCTCATGCCTTaGCCATCTGTTTTAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRMDQHVSTKLKRTKNARFPLMP*PSVLEE Trigger: TTCCTCTAAAACAGATGGCAAAGGCATGAGGGGAAA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAGTACTTAAAATGCTGTaGGAGTGCACCACTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVLLVRPSADFHELLFKTVLKML*ECTTAN Trigger: GTTGGCAGTGGTGCACTCCAACAGCATTTTAAGTAC...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | GTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATaGAATGCCAAAGACCAGCCTACTTCCTTATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: VSTKLKRTKNAR*NAKDQPTSLSI Trigger: AATGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR GCA 72 bp | CTAATGATCATCTTGAGGAGCAAGATGGCTTTCTACTaGTCTTTCTCAGCCATGGATAGCACTCAAATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LMIILRSKMAFY*SFSAMDSTQIK Trigger: TTTGATTTGAGTGCTATCCATGGCTGAGAAAGAGCAGTAGAAAGCCATCTTGCTCCTCAAGATGATCATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR GCA 72 bp | AATCTCTCTCCTACAAGAATGATTTGGACATCGTGTTaGTTGTCAGACCATCAGCTGACTTTCATGAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: NLSPTRMIWTSC*LSDHQLTFMNC Trigger: GCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGATGTCCAAATCATTCTTGTAGGAGAGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATGGATTGTATTGCCTTaGTCAGTAAGTTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CIYITLKTHTGTLSRFCKWIVLP*SVSSSV Trigger: AACAGAGGAACTTACTGACAAAGGCAATACAATCCA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAGTTTTAGAGGAATTTTaGAACACTGGCAAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRMDQHVSTKLKRTKNARVLEEF*NTGKGR Trigger: CCTTCCTTTGCCAGTGTTCAAAAATTCCTCTAAAAC...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR TCA 72 bp | GGATATTTTATCTGTGCCATGTTTCCTGAGACCAGCTaGGTATGTGTAGATACCTTATTCTCTAGCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GYFICAMFPETS*VCVDTLFSSIC Trigger: ACAGATGCTAGAGAATAAGGTATCTACACATACTCAGCTGGTCTCAGGAAACATGGCACAGATAAAATATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTAAAACACATGAAGACCCAAAGCTGAGCAGAATTTTAGAGGCTCTCAACGTCATGCCAGAAATATaGTTAGAATCACTCCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: WFKTHEDPKLSRILEALNVMPEI*LESLPL Trigger: TAATGGGAGTGATTCTAACAATATTTCTGGCATGAC...GTTGAGAGCCTCTAAAATTCTGCTCAGCTTTGGGTCTTCATGTGTTTTAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTACCCAAAGATCTTGATTaGCCAGTAACTACATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETDYIQKFRETDFSHLPVPKDLD*PVTTSQ Trigger: TTGTGATGTAGTTACTGGCAAATCAAGATCTTTGGG...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR TCA 72 bp | GACTATAGTTGTTATATAATTGATTTAGCTGAAGCATaGGGTCGTGTATGTATTGCAGACTACTGTTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: DYSCYIIDLAEA*GRVCIADYCLP Trigger: GGGTAAACAGTAGTCTGCAATACATACACGACCTCATGCTTCAGCTAAATCAATTATATAACAACTATAGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR TCA 72 bp | TTATACTACCAAGAACATCATTTCCAATGCACTTTGTaGACAGCTATAGGAATGAGGAATACCACTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LYYQEHHFQCTL*TAIGMRNTTSF Trigger: AAAGGAAGTGGTATTCCTCATTCCTATAGCTGTTCACAAAGTGCATTGGAAATGATGTTCTTGGTAGTATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| 3UTR TCA 72 bp | ATTTCAGAAATGGACATATTCAAACCTATTAGTGTCTaGATTCAGAAACTTCACTGCCCTAAGGCAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ISEMDIFKPISV*IQKLHCPKAKT Trigger: TGTTTTTGCCTTAGGGCAGTGAAGTTTCTGAATTCAGACACTAATAGGTTTGAATATGTCCATTTCTGAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| CDS-3UTR TCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTAGGCTGCGTCTCTGCTaGGGGGTCAGCTCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPRLRLC*GVSSGC Trigger: GCACCCCGAGCTGACCCCTCAGCAGAGACGCAGCCT...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCTTGCTGCCACAGTGTaGACTGGCTCCAGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLAATV*TGSSRP Trigger: AGGGCGACTGGAGCCAGTTCACACTGTGGCAGCAAG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTGTATGCGGCCACACATaGGTTCCAGGGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLVCGHT*VPGCMM Trigger: CATCATGCACCCTGGAACTCATGTGTGGCCGCATAC...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATAGGCTGCGTCTCTGCTaGGGGGTCAGCTCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNRLRLC*GVSSGC Trigger: GCACCCCGAGCTGACCCCTCAGCAGAGACGCAGCCT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSYYLWRKALRGQAFKSHRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTGGGCAGCAGCACACCTaGATCTGTCACTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLGQQHT*ICHCFT Trigger: AGTGAAGCAGTGACAGATGCAGGTGTGCTGCTGCCC...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTCCCGACCCTCTGCATaGCATCCCCCAAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYYLWRKALRGQAFKSHSRPSA*HPPSGS Trigger: ACTTCCACTTGGGGGATGCCATGCAGAGGGTCGGGA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTAGAGAACCTCTCATGTaGCCTAGAAACTGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLREPLM*PRNCCR Trigger: ACGGCAGCAGTTTCTAGGTCACATGAGAGGTTCTCT...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACACTTGCTGCCACAGTGTaGACTGGCTCCAGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTLAATV*TGSSRP Trigger: AGGGCGACTGGAGCCAGTTCACACTGTGGCAGCAAG...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGAGGCTGCGTCTCTGCTaGGGGGTCAGCTCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLRLRLC*GVSSGC Trigger: GCACCCCGAGCTGACCCCTCAGCAGAGACGCAGCCT...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYYLWRKALRGQAFKSHSCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTTGCGCAGAACCTCATTaGTTCTCTGCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLCAEPH*FSASLP Trigger: TGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCA...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAGGTCTCGATGGCCCTaGGCAGAACCTCATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSRSRWP*AEPHCF Trigger: GAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTGATGCATTCGGAGCCTaGAGTTTGTGGGTCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLDAFGA*SLWVLY Trigger: ATACAGGACCCACAAACTGCAGGCTCCGAATGCATC...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTATCTGCTTCAAGGTCTaGCCCCTCAGGGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKAICFKV*PLRGLL Trigger: GAGCAGGCCCCTGAGGGGGCAGACCTTGAAGCAGAT...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACCTTACTTCCTCTGCATaGGGCAGCAGCACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANLTSSA*GSSTPA Trigger: TGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAG...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATGTAGCCAGTCTCCCTaGGTGTCCACCACGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTCSQSP*VSTTAE Trigger: CTCAGCCGTGGTGGACACCCAGGGAGACTGGCTACA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGTGTAGCCAGTCTCCCTaGGTGTCCACCACGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWCSQSP*VSTTAE Trigger: CTCAGCCGTGGTGGACACCCAGGGAGACTGGCTACA...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTGGAGCCTGCAGTTTGTaGGTCCTGTATGCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLGACSL*VLYAAT Trigger: TGTGGCCGCATACAGGACCCACAAACTGCAGGCTCC...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGATTTCCTCTGCCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTCATTTCTGGGATGTGTCTaGGTCAGGCTTCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPDFLCPLAANWSEEGESFLGCV*VRLLPP Trigger: GGGAGGAAGAAGCCTGACTCAGACACATCCCAGAAA...TGACTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | GTGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTTCCTTGGCGACGTaGGCATGCCCAGAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VANMDHFPSRSNPRFPLPFSLAT*ACPEEL Trigger: AAGCTCCTCTGGGCATGCTCACGTCGCCAAGGAAAA...GGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATCTTGCTGCCACAGTGTaGACTGGCTCCAGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNLAATV*TGSSRP Trigger: AGGGCGACTGGAGCCAGTTCACACTGTGGCAGCAAG...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAACCCCTTCATTCTGTaGCGTACCATCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: WVALSEVTTAPLHVEPCVNPFIL*RTINTI Trigger: GATGGTGTTGATGGTACGTCACAGAATGAAGGGGTT...TACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKARLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACACGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCTTCACACTGCGCTTTaGCATATCTTGCTCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLHTAL*HILLVG Trigger: GCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTGCTTCTCTGCTTCTCTaGCAAGTCATCTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLASLLL*QVIFTL Trigger: CAGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGC...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATTGTTCCCGACCCTCTaGATGGCATCCCCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTLFPTL*MASPKW Trigger: CCACTTGGGGGATGCCATGCAGAGGGTCGGGAACAA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGTTGTTCCCGACCCTCTaGATGGCATCCCCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWLFPTL*MASPKW Trigger: CCACTTGGGGGATGCCATGCAGAGGGTCGGGAACAA...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | GATTTCCTCTGCCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTCATTTCTGGCAGCGGATGCTTTCTaGGATGTGTCTGAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFLCPLAANWSEEGESFLAADAF*DVSESG Trigger: GCCTGACTCAGACACATCCCAGAAAGCATCCGCTGC...CAGAAATGACTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCGCCATATCTTGCTCGTaGGCTCTGAGGGTACTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSAISCS*ALRVLS Trigger: CGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGC...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS-3UTR CCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTCCTGGTAGGTCTCGATaGCCCTGCGCAGAACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPPGRSR*PCAEPH Trigger: ATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGG...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAGGAGCCTGCAGTTTGTaGGTCCTGTATGCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTGACSL*VLYAAT Trigger: TGTGGCCGCATACAGGACCCACAAACTGCAGGCTCC...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAGGAGCCTGCAGTTTGTaGGTCCTGTATGCGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKGACSL*VLYAAT Trigger: TGTGGCCGCATACAGGACCCACAAACTGCAGGCTCC...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | GATTTCCTCTGCCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTCATTTCTGGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFLCPLAANWSEEGESFLEKGPS*NPSSSP Trigger: GGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTC...CAGAAATGACTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGGATGATCAGGATCATATGGGTGGCATTATCTGAAGTCACAACTGCCCCAGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRMIRIIWVALSEVTTAPEKGPS*NPSSSP Trigger: GGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTC...TGGGGCAGTTGTGACTTCAGATAATGCCACCCATATGATCCTGATCATCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCAGCTTTCTGGGATGTGTCTaGGTCAGGCTTCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MDHFPSRSNPRFPLPFSSFLGCV*VRLLPP Trigger: GGGAGGAAGAAGCCTGACTCAGACACATCCCAGAAA...GCTGCTAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTTTCCTTGGCGACGTaGGCATGCCCAGAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLIWIIFPVGAIPDFLCPFSLAT*ACPEEL Trigger: AAGCTCCTCTGGGCATGCTCACGTCGCCAAGGAAAA...AGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTGCCACACATCCACGATaGATATCAGCCGGAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLATHPR*ISAGKT Trigger: CGTCTTTCCGGCTGATATTCATCGTGGATGTGTGGC...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | GTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAGCAAAGGAAGAGGAGGCTATGCAAATCCAAAATaGCACAGGTCTTTCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTTAPLHVEPCVSKGRGGYANPK*HRSFPE Trigger: TTCAGGGAAAGACCTGTGTCATTTTGGATTTGCATA...GCCTCCTCTTCCTTTGCTTACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMSCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGGGCAGCAGCACACCTaGATCTGTCACTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPGQQHT*ICHCFT Trigger: AGTGAAGCAGTGACAGATGCAGGTGTGCTGCTGCCC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGTGTCTTACTTCCTCTaGATGGGGCAGCAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPVSYFL*MGQQHT Trigger: GGTGTGCTGCTGCCCCATGCAGAGGAAGTAAGACAC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGAGGTCTCGATGGCCCTaGGCAGAACCTCATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWRSRWP*AEPHCF Trigger: GAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCT...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATATCAGGCAGGTCGGCTaGCTCCTGGTAGGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNIRQVG*LLVGLD Trigger: ATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGAT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAAAATTGCGGGAAGGCTaGGTCTCTGCTGAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTKLREG*VSAEGS Trigger: TGACCCCTCAGCAGAGACGCAGCCTTCCCGCAATTT...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTTCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRGQATWVPDPEQEISLSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTTACTTCCTCTGCATaGGGCAGCAGCACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLTSSA*GSSTPA Trigger: TGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTCTTACTTCCTCTGCATaGGGCAGCAGCACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPLTSSA*GSSTPA Trigger: TGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAG...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCTTACTTCCTCTGCATaGGGCAGCAGCACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKALTSSA*GSSTPA Trigger: TGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATCCTGGTAGGTCTCGATaGCCCTGCGCAGAACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNPGRSR*PCAEPH Trigger: ATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGG...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATTCCCGACCCTCTGCATaGCATCCCCCAAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNSRPSA*HPPSGS Trigger: ACTTCCACTTGGGGGATGCCATGCAGAGGGTCGGGA...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTTCTTCCCACGTCCTaGTCTCATTGGCACACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLLPTS*SHWHTG Trigger: TCCGGTGTGCCAATGAGACCAGGACGTGGGAAGAAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPEKGPS*NPSSSP Trigger: GGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLIWIIFPVGAIPDFLCPEKGPS*NPSSSP Trigger: GGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTC...AGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR TCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKASSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTAGAGAACCTCTCATGTaGCCTAGAAACTGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLREPLM*PRNCCR Trigger: ACGGCAGCAGTTTCTAGGTCACATGAGAGGTTCTCT...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGCCACACATCCACGATaGATATCAGCCGGAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWATHPR*ISAGKT Trigger: CGTCTTTCCGGCTGATATTCATCGTGGATGTGTGGC...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKASCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPSCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTSCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTTGCGCAGAACCTCATTaGTTCTCTGCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLCAEPH*FSASLP Trigger: TGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCA...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCAATCAGGCAGGTCGGCTaGCTCCTGGTAGGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPIRQVG*LLVGLD Trigger: ATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGAT...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTGATGCATTCGGAGCCTaGAGTTTGTGGGTCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLDAFGA*SLWVLY Trigger: ATACAGGACCCACAAACTGCAGGCTCCGAATGCATC...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS-3UTR GCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATCCTGCCAGCCCATCTaGTTCAAGGTCTGCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITSCQPI*FKVCPL Trigger: GAGGGGGCAGACCTTGAAGCAGATGGGCTGGCAGGA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGCCATATCTTGCTCGTaGGCTCTGAGGGTACTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWAISCS*ALRVLS Trigger: CGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGC...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS-3UTR CCA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCATCCCGACCCTCTGCATaGCATCCCCCAAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPSRPSA*HPPSGS Trigger: ACTTCCACTTGGGGGATGCCATGCAGAGGGTCGGGA...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNEKGPS*NPSSSP Trigger: GGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTC...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078139.13 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAAGAGAACCTCTCATGTaGCCTAGAAACTGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTREPLM*PRNCCR Trigger: ACGGCAGCAGTTTCTAGGTCACATGAGAGGTTCTCT...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTATATGCAAATCCAAAATaGCACAGGTCTTTCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVALSEVTTAPLHVEPCVYANPK*HRSFPE Trigger: TTCAGGGAAAGACCTGTGTCATTTTGGATTTGCATA...TACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCTGCTCCTTCTTCCCCTaGCTTCGCTCTTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QWLIWIIFPVGAIPDFLCCSFFP*LRSSFL Trigger: CAAGAATGAAGAGCGAAGGCAGGGGAAGAAGGAGCA...GCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGAACATTCTGGATGTCTaGCCCCTCAGGGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLNILDV*PLRGLL Trigger: GAGCAGGCCCCTGAGGGGGCAGACATCCAGAATGTT...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACTCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCGGGCAGCAGCACACCTaGATCTGTCACTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSGQQHT*ICHCFT Trigger: AGTGAAGCAGTGACAGATGCAGGTGTGCTGCTGCCC...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCGTGTCTTACTTCCTCTaGATGGGGCAGCAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSVSYFL*MGQQHT Trigger: GGTGTGCTGCTGCCCCATGCAGAGGAAGTAAGACAC...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTACTGGTGGTGTGTCTTaGTGTTCTTCAACAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPTGGVS*CSSTEA Trigger: CGCCTCTGTTGAAGAACAGCAAGACACACCACCAGT...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACAAGTCATCTTCACACTaGGCTTTGCCATATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSYYLWRKALRGQAFKSHKSSSH*ALPYLA Trigger: AGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTTGCGCAGAACCTCATTaGTTCTCTGCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPCAEPH*FSASLP Trigger: TGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCA...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATTGTTCCCGACCCTCTaGATGGCATCCCCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKLFPTL*MASPKW Trigger: CCACTTGGGGGATGCCATGCAGAGGGTCGGGAACAA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTTTCTTCCTTCCTTGCTaGCACAGTGTGAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPFFLPC*HSVNWL Trigger: GAGCCAGTTCACACTGTGGCAGCAAGGAAGGAAGAA...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTGATGCATTCGGAGCCTaGAGTTTGTGGGTCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWYLDFYLHTQKEPERQPDAFGA*SLWVLY Trigger: ATACAGGACCCACAAACTGCAGGCTCCGAATGCATC...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTCCTGCCAAACCTCGTaGTCAAAAGAGTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSSCQTS*SKESSK Trigger: CTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGGTGTCCTCCGTGCTTTaGCTCTTTATCTTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMVSSVL*LFIFSH Trigger: ATGGCTGAAGATAAAGAGGCAAAGCACGGAGGACAC...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCCAGTTCTTTCTCTTCTaGCCATTTTCCTTGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: VANMDHFPSRSNPRFPLPQFFLF*PFSLAT Trigger: CGTCGCCAAGGAAAATGGCCAGAAGAGAAAGAACTG...GGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | ATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCAGCCAGTTCTTTCTCTTCTaGCCATTTTCCTTGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: MDHFPSRSNPRFPLPFSSQFFLF*PFSLAT Trigger: CGTCGCCAAGGAAAATGGCCAGAAGAGAAAGAACTG...GCTGCTAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTSSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKASSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACCTGTCACTGCTTCACTaGGATCTGAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANLSLLH*DLNFPA Trigger: AGCAGGAAAATTCAGATCCCAGTGAAGCAGTGACAG...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACCTTCTTCTTCTTAACTaGTGGTGTGTCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSYYLWRKALRGQAFKSHLLLLN*WCVLLF Trigger: GAACAGCAAGACACACCACCAGTTAAGAAGAAGAAG...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCACTTCTTCCCACGTCCTaGTCTCATTGGCACACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPLLPTS*SHWHTG Trigger: TCCGGTGTGCCAATGAGACCAGGACGTGGGAAGAAG...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGAAGAGTCATCAAAGATaGGCACCTTGCCTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWKSHQR*APCLLP Trigger: GGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTT...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAGCACTCCTAGTTTTCCTTaGAGTACCTCTGATAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VALSEVTTAPLHVEPCVSTPSFP*STSDKL Trigger: TAACTTATCAGAGGTACTTCAAGGAAAACTAGGAGT...GCTTACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACGTGTCTTACTTCCTCTaGATTTTCCTGCTCATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANVSYFL*IFLLIR Trigger: ACGAATGAGCAGGAAAATTCAGAGGAAGTAAGACAC...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTATCTGTCTCTCTTCCCTaGAGCGGATGCTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIWIIFPVGAIPDFLCPLSVSLP*SGCFLG Trigger: TCCCAGAAAGCATCCGCTGCAGGGAAGAGAGACAGA...TAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR GCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACGGATCTGAATTTTCCTaGTCATTCGTCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANGSEFS*SFVISS Trigger: GGAAGAGATGACGAATGAGCAGGAAAATTCAGATCC...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAGGGCAGCAGCACACCTaGATCTGTCACTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITGQQHT*ICHCFT Trigger: AGTGAAGCAGTGACAGATGCAGGTGTGCTGCTGCCC...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAGTCATCTTCACACTaGGCTTTGCCATATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSKSSSH*ALPYLA Trigger: AGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAAGGTCTCGATGGCCCTaGGCAGAACCTCATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKRSRWP*AEPHCF Trigger: GAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCT...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAATCAGGCAGGTCGGCTaGCTCCTGGTAGGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARIRQVG*LLVGLD Trigger: ATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGAT...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTGTGTCCTCCGTGCTTTaGCTCTTTATCTTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLIWIIFPVGAIPDFLCPVSSVL*LFIFSH Trigger: ATGGCTGAAGATAAAGAGGCAAAGCACGGAGGACAC...AGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGTGTCCTCCGTGCTTTaGCTCTTTATCTTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPVSSVL*LFIFSH Trigger: ATGGCTGAAGATAAAGAGGCAAAGCACGGAGGACAC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTGTGTCCTCCGTGCTTTaGCTCTTTATCTTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKAVSSVL*LFIFSH Trigger: ATGGCTGAAGATAAAGAGGCAAAGCACGGAGGACAC...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACTTCTTGTGTCCTCCGTaGTTTGCCTCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANFLCPP*FASLSS Trigger: TGAAGATAAAGAGGCAAAGCACGGAGGACACAAGAA...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAGCGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VALSEVTTAPLHVEPCVSGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...GCTTACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATTCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNSSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGCTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMLFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGCTGTCACTGCTTCACTaGGATCTGAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMLSLLH*DLNFPA Trigger: AGCAGGAAAATTCAGATCCCAGTGAAGCAGTGACAG...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACACTTACTTCCTCTGCATaGGGCAGCAGCACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITLTSSA*GSSTPA Trigger: TGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAG...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCTTCTTCTTCTTAACTaGTGGTGTGTCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLLLLN*WCVLLF Trigger: GAACAGCAAGACACACCACCAGTTAAGAAGAAGAAG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGCTTCTTCCCACGTCCTaGTCTCATTGGCACACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLLLPTS*SHWHTG Trigger: TCCGGTGTGCCAATGAGACCAGGACGTGGGAAGAAG...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTACATTACTGCCATCTTTaGTCAGGCCTAATAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: WVALSEVTTAPLHVEPCVHYCHL*SGLIKL Trigger: AAGTTTTATTAGGCCTGACCAAAGATGGCAGTAATG...TACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTTTATCCATCACCATaGGGCCTTCATCACGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLYPSP*GLHHGL Trigger: TAATCCGTGATGAAGGCCTCATGGTGATGGATAAAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAGTATGCGGCCACACATaGGTTCCAGGGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARVCGHT*VPGCMM Trigger: CATCATGCACCCTGGAACTCATGTGTGGCCGCATAC...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAATCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCAACTGGTGGTGTGTCTTaGTGTTCTTCAACAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPTGGVS*CSSTEA Trigger: CGCCTCTGTTGAAGAACAGCAAGACACACCACCAGT...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGCTTCACACTGCGCTTTaGCATATCTTGCTCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLLHTAL*HILLVG Trigger: GCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAG...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAACCTCATTGCTTCTCTaGTTCTCTGCCAAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKTSLLL*FSAKSS Trigger: AGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAACCTCATTGCTTCTCTaGTTCTCTGCCAAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTTSLLL*FSAKSS Trigger: AGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGT...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAATCCTGCCAAACCTCGTaGTCAAAAGAGTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKSCQTS*SKESSK Trigger: CTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGA...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAAAATTGCGGGAAGGCTaGGTCTCTGCTGAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARKLREG*VSAEGS Trigger: TGACCCCTCAGCAGAGACGCAGCCTTCCCGCAATTT...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKASMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACACTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTLFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTCTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPLFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKALFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGCTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWLFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTCTTCTTCTTCTTAACTaGTGGTGTGTCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLLLLLN*WCVLLF Trigger: GAACAGCAAGACACACCACCAGTTAAGAAGAAGAAG...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGGCCATATCTTGCTCGTaGGCTCTGAGGGTACTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLAISCS*ALRVLS Trigger: CGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGC...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATCCTGGTAGGTCTCGATaGCCCTGCGCAGAACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDPGRSR*PCAEPH Trigger: ATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGG...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| 3UTR CAA 72 bp | TGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTaGTTCGACTGGCTTAGAGATCAGTGCATGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVAGIPAISAAM*FDWLRDQCMNV Trigger: GACATTCATGCACTGATCTCTAAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATGTATGCGGCCACACATaGGTTCCAGGGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDVCGHT*VPGCMM Trigger: CATCATGCACCCTGGAACTCATGTGTGGCCGCATAC...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATCCTGCCAGCCCATCTaGTTCAAGGTCATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARSCQPI*FKVMVC Trigger: ACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGGATCTGAATTTTCCTaGTCATTCGTCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPGSEFS*SFVISS Trigger: GGAAGAGATGACGAATGAGCAGGAAAATTCAGATCC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATGTGTCTTACTTCCTCTaGATGGGGCAGCAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDVSYFL*MGQQHT Trigger: GGTGTGCTGCTGCCCCATGCAGAGGAAGTAAGACAC...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR GCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAAGTCATCTTCACACTaGGCTTTGCCATATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKKSSSH*ALPYLA Trigger: AGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTAAATGTCCTCTCTTGTaGCCAAGTTCATACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCVAGIPAISAAMLFDWLKCPLL*PSSYHL Trigger: TAAGTGGTATGAACTTGGGCACAAGAGAGGACATTT...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGGATCATATGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTACCATCAACACCATCTaGAGTTTCGCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRIIWVALSEVTTAPLHVTINTI*SFAFFF Trigger: GAAGAAGAAAGCGAAACTGCAGATGGTGTTGATGGT...AACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCATATGATCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITSSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGTCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLSSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATCTGTCACTGCTTCACTaGGATCTGAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNLSLLH*DLNFPA Trigger: AGCAGGAAAATTCAGATCCCAGTGAAGCAGTGACAG...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAGCAAAGGACATTACTGCCATCTTTaGTCAGGCCTAATAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTTAPLHVEPCVSKGHYCHL*SGLIKL Trigger: AAGTTTTATTAGGCCTGACCAAAGATGGCAGTAATG...TCCTTTGCTTACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR TCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATTCCTCGATTTCTTCATaGACTGTCCCGGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDSSISS*TVPGSR Trigger: CCTGGAACCCGGGACAGTTCATGAAGAAATCGAGGA...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAGCCACACATCCACGATaGATATCAGCCGGAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: IVLLVRPSADFHELLFKTATHPR*ISAGKT Trigger: CGTCTTTCCGGCTGATATTCATCGTGGATGTGTGGC...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATGTGTCTTACTTCCTCTaGATTTTCCTGCTCATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNVSYFL*IFLLIR Trigger: ACGAATGAGCAGGAAAATTCAGAGGAAGTAAGACAC...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTACGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETDYIQKFRETDFSHLPVRLWFS*QPICFK Trigger: CTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCG...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACATTCAAATGCGTTCACTaGTTCCTCAATTTTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTFKCVH*FLNFTP Trigger: AGGGGTAAAATTGAGGAAGCAGTGAACGCATTTGAA...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATCTTCACACTGCGCTTTaGCATATCTTGCTCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDLHTAL*HILLVG Trigger: GCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAG...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAAACTCTTGTCAGAGCTaGCTTTCTCCTTGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIWIIFPVGAIPDFLCPLNSCQS*LSPCLC Trigger: ACAGAGACAAGGAGAAAGCCAGCTCTGACAAGAGTT...TAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCATATGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RIIWVALSEVTTAPLHVEGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...CTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCATATGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCTCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKACWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAATGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGSQPPCIGSQTENSKCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACCTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: MAGGSPQTTCQLAVFFANLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAACTTTATCCATCACCATaGGGCCTTCATCACGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKLYPSP*GLHHGL Trigger: TAATCCGTGATGAAGGCCTCATGGTGATGGATAAAG...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGCTTTATCCATCACCATaGGGCCTTCATCACGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLLYPSP*GLHHGL Trigger: TAATCCGTGATGAAGGCCTCATGGTGATGGATAAAG...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ACATTAATACTTCTCATGCTCTCCAGACTCTTTCTTACTTACCTCAATACAGGATCTGTCTCTCTTCCCTaGAGCGGATGCTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLILLMLSRLFLTYLNTGSVSLP*SGCFLG Trigger: TCCCAGAAAGCATCCGCTGCAGGGAAGAGAGACAGA...TCCTGTATTGAGGTAAGTAAGAAAGAGTCTGGAGAGCATGAGAAGTATTAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCGGATCTGAATTTTCCTaGTCATTCGTCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSGSEFS*SFVISS Trigger: GGAAGAGATGACGAATGAGCAGGAAAATTCAGATCC...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAGGGCAGCAGCACACCTaGATCTGTCACTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETDYIQKFRETDFSHLPVGQQHT*ICHCFT Trigger: AGTGAAGCAGTGACAGATGCAGGTGTGCTGCTGCCC...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATACTGGTGGTGTGTCTTaGTGTTCTTCAACAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDTGGVS*CSSTEA Trigger: CGCCTCTGTTGAAGAACAGCAAGACACACCACCAGT...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAGCTTCTCTGCTTCTCTaGCAAGTCATCTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARASLLL*QVIFTL Trigger: CAGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGC...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATAAATGTCCTCTCTTGTaGCCAAGTTCATACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RHISKFNVVLNPSSSSSNKCPLL*PSSYHL Trigger: TAAGTGGTATGAACTTGGGCACAAGAGAGGACATTT...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATTTCTTCCTTCCTTGCTaGCACAGTGTGAACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDFFLPC*HSVNWL Trigger: GAGCCAGTTCACACTGTGGCAGCAAGGAAGGAAGAA...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATCCTGCCAAACCTCGTaGTCAAAAGAGTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKSCQTS*SKESSK Trigger: CTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCTTCTTGTGTCCTCCGTaGTTTGCCTCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSFLCPP*FASLSS Trigger: TGAAGATAAAGAGGCAAAGCACGGAGGACACAAGAA...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACACTCTTCCATGTCATTTaGATGGTTCTGCGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITLFHVI*MVLRCC Trigger: ACAGCATCGCAGAACCATCCAAATGACATGGAAGAG...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGCTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR TCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAAAGAGTCATCAAAGATaGGCACCTTGCCTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLVRPSADFHELLFKTKSHQR*APCLLP Trigger: GGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTT...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | ACATCATTTCCAATGCACTTTGTGAACAGCTATAGGAATGAGGAATACCACTTCAACCCCTTCATTCTGTaGCGTACCATCAACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSFPMHFVNSYRNEEYHFNPFIL*RTINTI Trigger: GATGGTGTTGATGGTACGTCACAGAATGAAGGGGTT...GAAGTGGTATTCCTCATTCCTATAGCTGTTCACAAAGTGCATTGGAAATGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATCATTTGGATGGTTCTaGGATGCTGTGTCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARSFGWF*DAVSST Trigger: TGTGGAAGACACAGCATCGCAGAACCATCCAAATGA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAAGGATCTGAATTTTCCTaGTCATTCGTCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKGSEFS*SFVISS Trigger: GGAAGAGATGACGAATGAGCAGGAAAATTCAGATCC...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATTCTTGTGTCCTCCGTaGTTTGCCTCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITFLCPP*FASLSS Trigger: TGAAGATAAAGAGGCAAAGCACGGAGGACACAAGAA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATCCATGTCATTTGGATaGTTCTGCGATGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARSMSFG*FCDAVS Trigger: AGACACAGCATCGCAGAACCATCCAAATGACATGGA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDNPPLLHSMAHICRDKALLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTCTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTGGTCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNISTDMHNPYPLSIPGPGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGACC...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108335.8 |
||
| 3UTR CAA 72 bp | GAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTaGAAACAGATTACATACAGAAGTTCAGAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGHNEPSLPRV*KQITYRSSEKL Trigger: CAGTTTCTCTGAACTTCTGTATGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| 3UTR CAA 72 bp | CTCTCTCCTACAAGAATGATTTGGACATCGTGTTGCTaGTCAGACCATCAGCTGACTTTCATGAATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTRMIWTSCC*SDHQLTFMNCF Trigger: AAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGATGTCCAAATCATTCTTGTAGGAGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAGACCCCTTCATGCTCTaGGGGTTCATATACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETDYIQKFRETDFSHLPVDPFML*GFIYWF Trigger: GAACCAGTATATGAACCCTCAGAGCATGAAGGGGTC...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGTGCTCCTTCTTCCCCTaGCTTCGCTCTTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWCSFFP*LRSSFL Trigger: CAAGAATGAAGAGCGAAGGCAGGGGAAGAAGGAGCA...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR GCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATACCTCATTGCTTCTCTaGTTCTCTGCCAAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDTSLLL*FSAKSS Trigger: AGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGT...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTATCATCTTCAACATTCTaGATGTCTGCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETDYIQKFRETDFSHLPVSSSTF*MSAPSG Trigger: CCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGA...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR TCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAGTGTCTTACTTCCTCTaGATTTTCCTGCTCATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLVRPSADFHELLFKTVSYFL*IFLLIR Trigger: ACGAATGAGCAGGAAAATTCAGAGGAAGTAAGACAC...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATTCAAATGCGTTCACTaGTTCCTCAATTTTACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRMDQHVSTKLKRTKNARFKCVH*FLNFTP Trigger: AGGGGTAAAATTGAGGAAGCAGTGAACGCATTTGAA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACAGGCCTAATAAAACTTTaGCATCATCCACATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITGLIKL*HHPHQS Trigger: ACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCC...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| 3UTR CAA 72 bp | AAATCTCTCTCCTACAAGAATGATTTGGACATCGTGTaGCTTGTCAGACCATCAGCTGACTTTCATGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLSYKNDLDIV*LVRPSADFHEL Trigger: CAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGATGTCCAAATCATTCTTGTAGGAGAGAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAAAATGTCCTCTCTTGTaGCCAAGTTCATACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLVRPSADFHELLFKTKCPLL*PSSYHL Trigger: TAAGTGGTATGAACTTGGGCACAAGAGAGGACATTT...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATAGTTTTAATATGTACAACATTCTGCAAGACGCACATTCACACTCTCACCATCAACACCATCTaGAGTTTCGCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKIVLICTTFCKTHIHTLTINTI*SFAFFF Trigger: GAAGAAGAAAGCGAAACTGCAGATGGTGTTGATGGT...GAGAGTGTGAATGTGCGTCTTGCAGAATGTTGTACATATTAAAACTATCTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGAACTCTTGTCAGAGCTaGCTTTCTCCTTGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWNSCQS*LSPCLC Trigger: ACAGAGACAAGGAGAAAGCCAGCTCTGACAAGAGTT...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTACTGTCACTGCTTCACTaGGATCTGAATTTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETDYIQKFRETDFSHLPVLSLLH*DLNFPA Trigger: AGCAGGAAAATTCAGATCCCAGTGAAGCAGTGACAG...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CCA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATTGCTGGAATCATCTATaGTGTTATCTGAAATCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDCWNHL*CYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCA...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAACTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CIYITLKTHTGTLSRFCKLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACACTTCTGAGATTATGCTaGAATCATCTATGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGHNEPSLPRVLKQITLLRLC*NHLWCY Trigger: ATAACACCATAGATGATTCCAGCATAATCTCAGAAG...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR GCA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGTTCTTGTGTCCTCCGTaGTTTGCCTCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWFLCPP*FASLSS Trigger: TGAAGATAAAGAGGCAAAGCACGGAGGACACAAGAA...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
||
| CDS-3UTR CCA 90 bp | AACCTATTAGTGTCTGAATTCAGAAACTTCACTGCCCTAAGGCAAAAACATAGGGGAAGTCCTTTGCTTTaGCTAGAACTTCTTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLVSEFRNFTALRQKHRGSPLL*LELLHN Trigger: ATTATGAAGAAGTTCTAGCCAAAGCAAAGGACTTCC...CCTATGTTTTTGCCTTAGGGCAGTGAAGTTTCTGAATTCAGACACTAATAGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146441.8 |
||
| 3UTR CAA 72 bp | AAAATAAAATGCAGCAATGCTTTACTAATGATCATCTaGAGGAGCAAGATGGCTTTCTACTGCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIKCSNALLMII*RSKMAFYCSFS Trigger: TGAGAAAGAGCAGTAGAAAGCCATCTTGCTCCTCAAGATGATCATTAGTAAAGCATTGCTGCATTTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | CGTGCTTTGCCTCTCTCCGAGCCCCGGGGCTACTGCTGCTACCGCTaGTACCCGTGCTCGGGCTACCGCTGCCCGAGCCGCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RALPLSEPRGYCCYR*YPCSGYRCPSRCRC Trigger: GCAGCGGCAGCGGCTCGGGCAGCGGTAGCCCGAGCACGGGTAGCAGCGGTAGCAGCAGTAGCCCCGGGGCTCGGAGAGAGGCAAAGCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS GCA 90 bp | TCTTGTGTCCTCCGTGCTTTGCCTCTCTCCGAGCCCCGGGGCTACTaGTGCTACCGCTGCTACCCGTGCTCGGGCTACCGCTGCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCVLRALPLSEPRGY*CYRCYPCSGYRCPS Trigger: GCTCGGGCAGCGGTAGCCCGAGCACGGGTAGCAGCGGTAGCAGCAGTAGCCCCGGGGCTCGGAGAGAGGCAAAGCACGGAGGACACAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS GCA 90 bp | GTCGGTCACTGTGAGGAAGTCCTCAACCTCCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAGGTCTGCCCCCTCAGGGGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGHCEEVLNLRLWFS*QPICFKVCPLRGLL Trigger: GAGCAGGCCCCTGAGGGGGCAGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS TCA 90 bp | GCTTCAAGGTCTGCCCCCTCAGGGGCCTGCTCCTCCAGCTCAGCGTaGGTCTCTGCCTCCTCCTCCGGTGGAAATGTCCTCTCAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASRSAPSGACSSSSA*VSASSSGGNVLSEG Trigger: TCCTTCTGAGAGGACATTTCCACCGGAGGAGGAGGCAGAGACTCACGCTGAGCTGGAGGAGCAGGCCCCTGAGGGGGCAGACCTTGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS GCA 90 bp | GACCCTCCTGAAATCCCTCCTCTTCTCCCATTCTTGTGTCCTCCGTaGTTTGCCTCTCTCCGAGCCCCGGGGCTACTGCTGCTACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DPPEIPPLLPFLCPP*FASLRAPGLLLLPL Trigger: CAGCGGTAGCAGCAGTAGCCCCGGGGCTCGGAGAGAGGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGGATTTCAGGAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS GCA 90 bp | GTCTGCCCCCTCAGGGGCCTGCTCCTCCAGCTCAGCGTGAGTCTCTaGCTCCTCCTCCGGTGGAAATGTCCTCTCAGAAGGAGATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCPLRGLLLQLSVSL*LLLRWKCPLRRRSF Trigger: GAAAGATCTCCTTCTGAGAGGACATTTCCACCGGAGGAGGAGGCAGAGACTCACGCTGAGCTGGAGGAGCAGGCCCCTGAGGGGGCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 ENSMUST00000152526.8 |
||
| CDS GCA 90 bp | CAAGCTCAGCTTCACCAGGTCTGTAGGGGCATCAGGCAGGTCGGCTaGCTCCTGGTAGGTCTCGATGGCCCTGCGCAGAACCTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAQLHQVCRGIRQVG*LLVGLDGPAQNLIA Trigger: AGCAATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGATGCCCCTACAGACCTGGTGAAGCTGAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | GTCATCACTGTCGGTCACTGTGAGGAAGTCCTCAACCTCCGGCTGTaGTTCTCCTGCCAGCCCATCTGCTTCAAGGTCTGCCCCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VITVGHCEEVLNLRL*FSCQPICFKVCPLR Trigger: CCTGAGGGGGCAGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGACAGTGATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS TCA 90 bp | TGCGTCTCTGCTGAGGGGTCAGCTCGGGGTGCCACACATCCACGATaGATATCAGCCGGAAAGACGAGGCATCCTGCCAAACCTCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CVSAEGSARGATHPR*ISAGKTRHPAKPRA Trigger: AGCACGAGGTTTGGCAGGATGCCTCGTCTTTCCGGCTGATATTCATCGTGGATGTGTGGCACCCCGAGCTGACCCCTCAGCAGAGACGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | TCCCGGGTTCCAGGTCCTCAAATCTGTCATCACTGTCGGTCACTGTaGGGAAGTCCTCAACCTCCGGCTGTGGTTCTCCTGCCAGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVPGPQICHHCRSL*GSPQPPAVVLLPAH Trigger: ATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGACAGTGATGACAGATTTGAGGACCTGGAACCCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | CGGCTGCCTCCTGGTAGGTCTCGATGGCCCTGCGCAGAACCTCATTaGTTCTCTGCTTCTCTGCCAAGTCATCTTCACACTGCGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPPGRSRWPCAEPH*FSASLPSHLHTALC Trigger: GCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGGAGGCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | GCACACCGGATCTTGCAGCCTTCCTTGGGGATCACTAACCCCAGATaGATTCGGAGCCTGCAGTTTGTGGGTCCTGTATGCGGCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: AHRILQPSLGITNPR*IRSLQFVGPVCGHT Trigger: TGTGTGGCCGCATACAGGACCCACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | CCCACGTCCTGGTCTCATTGGCACACCGGATCTTGCAGCCTTCCTTaGGGATCACTAACCCCAGATGCATTCGGAGCCTGCAGTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTSWSHWHTGSCSLP*GSLTPDAFGACSLW Trigger: CCACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCAGGACGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | TGCAGCCTTCCTTGGGGATCACTAACCCCAGATGCATTCGGAGCCTaGAGTTTGTGGGTCCTGTATGCGGCCACACATGAGTTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLPWGSLTPDAFGA*SLWVLYAATHEFQG Trigger: ACCCTGGAACTCATGTGTGGCCGCATACAGGACCCACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | GTCATCACTGTCGGTCACTGTGAGGAAGTCCTCAACCTCCGGCTGTaGTTCTCCTGCCAGCCCATCTGCTTCAAGGTCATGGTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VITVGHCEEVLNLRL*FSCQPICFKVMVCV Trigger: CACACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGACAGTGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CCACTGCACGTTGAGCCCTGCGTAAGCAAAGGAAGAGGAGGCAGCTCCGTTTTCCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLHVEPCVSKGRGGSSVFPLLPF*CPPCFA Trigger: GGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGG...GAAAACGGAGCTGCCTCCTCTTCCTTTGCTTACGCAGGGCTCAACGTGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS CCA 90 bp | GGCCTGCTCCTCCAGCTCAGCGTGAGTCTCTGCCTCCTCCTCCGGTaGAAATGTCCTCTCAGAAGGAGATCTTTCTTTAAGGCCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLLQLSVSLCLLLR*KCPLRRRSFFKAFS Trigger: GCTAAAGGCCTTAAAGAAAGATCTCCTTCTGAGAGGACATTTCCACCGGAGGAGGAGGCAGAGACTCACGCTGAGCTGGAGGAGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108333.8 ENSMUST00000152526.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTTCGGAGCCTGCAGTTaGTGGGTCCTGTATGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSFGACS*WVLYAA Trigger: GGCCGCATACAGGACCCACAAACTGCAGGCTCCGAA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACCTGCGCAGAACCTCATaGCTTCTCTGCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSYYLWRKALRGQAFKSHLRRTS*LLCFSA Trigger: GGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAG...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTTGGCACACCGGATCTaGCAGCCTTCCTTGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSLAHRI*QPSLGI Trigger: GATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | ACGAGGCATCCTGCCAAACCTCGTGCTCAAAAGAGTCATCAAAGATaGGCACCTTGCCTTCTTCCCACGTCCTGGTCTCATTGGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: TRHPAKPRAQKSHQR*APCLLPTSWSHWHT Trigger: GGTGTGCCAATGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGATGCCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSPLLPF*CPPCFA Trigger: GGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078139.13 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAGAGGCCAGGCTACCTGGGTCCCTGACCCTGAGCAGGAAATTTCACTTCACTTATATGCCTCTTaGTTCCCGACCCTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RQRGQATWVPDPEQEISLHLYAS*FPTLCM Trigger: CATGCAGAGGGTCGGGAACAAAGAGGCATATAAGTG...AAGTGAAATTTCCTGCTCAGGGTCAGGGACCCAGGTAGCCTGGCCTCTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGTTCGGAGCCTGCAGTTaGTGGGTCCTGTATGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWFGACS*WVLYAA Trigger: GGCCGCATACAGGACCCACAAACTGCAGGCTCCGAA...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACTCAAAGATGAGCACCTaGCCTTCTTCCCACGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSYYLWRKALRGQAFKSHSKMST*PSSHVL Trigger: CAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGA...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | TGCATTCGGAGCCTGCAGTTTGTGGGTCCTGTATGCGGCCACACATaGGTTCCAGGGTGCATGATGGAGTATTTGATCTGTCCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CIRSLQFVGPVCGHT*VPGCMMEYLICPLL Trigger: CAGAAGAGGACAGATCAAATACTCCATCATGCACCCTGGAACTCATGTGTGGCCGCATACAGGACCCACAAACTGCAGGCTCCGAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | CAAGTTCATACCACTTATATGCCTCTTTGTTCCCGACCCTCTGCATaGCATCCCCCAAGTGGAAGTAAAACCGGCCATCATCCGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVHTTYMPLCSRPSA*HPPSGSKTGHHPCQ Trigger: CTGGCACGGATGATGGCCGGTTTTACTTCCACTTGGGGGATGCCATGCAGAGGGTCGGGAACAAAGAGGCATATAAGTGGTATGAACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCTCTTCACACTGCGCTTaGCCATATCTTGCTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSSSHCA*PYLARG Trigger: CCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGA...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCATCTTGCAGCCTTCCTaGGGGATCACTAACCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSILQPS*GITNPR Trigger: TCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGAT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | GCCGAGCAATGCAATGACCATGAACCATGTGAAAAAGGACCCTCCTaGAATCCCTCCTCTTCTCCCATTCTTGTGTCCTCCGTGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEQCNDHEPCEKGPS*NPSSSPILVSSVLC Trigger: GCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGGATTTCAGGAGGGTCCTTTTTCACATGGTTCATGGTCATTGCATTGCTCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000103004.10 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 ENSMUST00000152526.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SDNPPLLHSMAHICRDKAPLLPF*CPPCFA Trigger: GGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGG...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QWLIWIIFPVGAIPDFLCPLLPF*CPPCFA Trigger: GGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGG...GCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | ATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCAGCGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MDHFPSRSNPRFPLPFSSALVFL*ANPPGP Trigger: AGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGC...GCTGCTAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | GCAATCCCAGATTTCCTCTGCCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTTAGACTTGGAACTCTaGTCAGAGCTGGCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIPDFLCPLAANWSEEGELDLEL*SELAFS Trigger: GGAGAAAGCCAGCTCTGACAAGAGTTCCAAGTCTAA...CTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAACTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSNWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGTT...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTGCGCAGAACCTCATaGCTTCTCTGCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLRRTS*LLCFSA Trigger: GGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCCACTTATATGCCTCTTaGTTCCCGACCCTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNGSQPPCIGSQTENSHLYAS*FPTLCM Trigger: CATGCAGAGGGTCGGGAACAAAGAGGCATATAAGTG...GCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGATTTCCTCTGCCCTTTAGCAGCGAACTGGAGTGAGGAAGGTGAGTCATGTGTCCTCCGTGCTTaGCCTCTTTATCTTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPDFLCPLAANWSEEGESCVLRA*PLYLQP Trigger: TGGCTGAAGATAAAGAGGCAAAGCACGGAGGACACA...TGACTCACCTTCCTCACTCCAGTTCGCTGCTAAAGGGCAGAGGAAATCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103004.10 |
||
| CDS GCA 90 bp | CTGCTTCTCTGCCAAGTCATCTTCACACTGCGCTTTGCCATATCTTaGTCGTGGGCTCTGAGGGTACTTTCGAACCAGTTCTTCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLCQVIFTLRFAIS*SWALRVLSNQFFKC Trigger: GCATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | CATTGCTTCTCTGCTTCTCTGCCAAGTCATCTTCACACTGCGCTTTaGCATATCTTGCTCGTGGGCTCTGAGGGTACTTTCGAACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HCFSASLPSHLHTAL*HILLVGSEGTFEPV Trigger: AACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 90 bp | ACGATGAATATCAGCCGGAAAGACGAGGCATCCTGCCAAACCTCGTaGTCAAAAGAGTCATCAAAGATGAGCACCTTGCCTTCTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TMNISRKDEASCQTS*SKESSKMSTLPSSH Trigger: GTGGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGATGCCTCGTCTTTCCGGCTGATATTCATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | CTCTGCCAAGTCATCTTCACACTGCGCTTTGCCATATCTTGCTCGTaGGCTCTGAGGGTACTTTCGAACCAGTTCTTCAAATGCGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCQVIFTLRFAISCS*ALRVLSNQFFKCVH Trigger: GTGAACGCATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDNPPLLHSMAHICRDKAALVFL*ANPPGP Trigger: AGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGC...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS-3UTR CAA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATCTGCGCAGAACCTCATaGCTTCTCTGCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RHISKFNVVLNPSSSSSNLRRTS*LLCFSA Trigger: GGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAG...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAGGCAGGAAGAGACCCTaGGCTTTATCCATCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTGRKRP*ALSITM Trigger: CATGGTGATGGATAAAGCCAAGGGTCTCTTCCTGCC...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTGTGTCCTCCGTGCTTaGCCTCTTTATCTTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMCVLRA*PLYLQP Trigger: TGGCTGAAGATAAAGAGGCAAAGCACGGAGGACACA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS TCA 90 bp | AAGTCATCTTCACACTGCGCTTTGCCATATCTTGCTCGTGGGCTCTaGGGGTACTTTCGAACCAGTTCTTCAAATGCGTTCACTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSSSHCALPYLARGL*GYFRTSSSNAFTAS Trigger: GGAAGCAGTGAACGCATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCATTATCTGAAGTCACAACTGCCCCACTGCACGTTGAGCCCTGCGTAAGCAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VALSEVTTAPLHVEPCVSRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...GCTTACGCAGGGCTCAACGTGCAGTGGGGCAGTTGTGACTTCAGATAATGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CAA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTATCTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNISTDMHNPYPLSIPGPIWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGAT...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTAACTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWYLDFYLHTQKEPERQPNWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGTT...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGACACATCAGCAAGTTTAATGTAGTGCTGAACCCCAGCAGCAGTAGCTCCAATGGCAGGAAGAGACCCTaGGCTTTATCCATCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: RHISKFNVVLNPSSSSSNGRKRP*ALSITM Trigger: CATGGTGATGGATAAAGCCAAGGGTCTCTTCCTGCC...ATTGGAGCTACTGCTGCTGGGGTTCAGCACTACATTAAACTTGCTGATGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGCTCATTCTTCCTTCCTaGCTGCCACAGTGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWLILPS*LPQCEL Trigger: CAGTTCACACTGTGGCAGCAAGGAAGGAAGAATGAG...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATTCGGAGCCTGCAGTTaGTGGGTCCTGTATGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRMDQHVSTKLKRTKNARFGACS*WVLYAA Trigger: GGCCGCATACAGGACCCACAAACTGCAGGCTCCGAA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGTTGGCACACCGGATCTaGCAGCCTTCCTTGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLLAHRI*QPSLGI Trigger: GATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAA...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTTTAGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LIWIIFPVGAIPDFLCPLALVFL*ANPPGP Trigger: AGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGC...TAAAGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTATTACCTGTGGAGAAAGGCCCTGAGGGGGCAGGCATTCAAATCTCACAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSYYLWRKALRGQAFKSHRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...GTGAGATTTGAATGCCTGCCCCCTCAGGGCCTTTCTCCACAGGTAATAGGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGGAGGCAGCTCCGTTTTCCAACCCACTGCTTTTCAGTCCCTGAGTTGAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKRRQLRFPTHCFSVPELRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...CAACTCAGGGACTGAAAAGCAGTGGGTTGGAAAACGGAGCTGCCTCCTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CAA 90 bp | ATTGACTTAACTGAGGTGCCAGCAGGTGGACATCAGTGCACTGTGGTCACAATGTGGTTCATCATAGTCTaGGTGTCTTACTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IDLTEVPAGGHQCTVVTMWFIIV*VSYFLC Trigger: GCAGAGGAAGTAAGACACCAAGACTATGATGAACCA...CATTGTGACCACAGTGCACTGATGTCCACCTGCTGGCACCTCAGTTAAGTCAAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCATCTTCACACTGCGCTTaGCCATATCTTGCTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPSSHCA*PYLARG Trigger: CCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGA...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTGGCTGGAATACCAGCCATTTCTGCAGCAATGTTGTTCGACTGGCTTATGCTCTCAGATATCTaGTTCTGTGCCTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCVAGIPAISAAMLFDWLMLSDI*FCAFRM Trigger: CATCCTGAAGGCACAGAACAAGATATCTGAGAGCAT...AAGCCAGTCGAACAACATTGCTGCAGAAATGGCTGGTATTCCAGCCACACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTGCAAAATGTCCTCTCTaGTGCCCAAGTTCATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SWYLDFYLHTQKEPERQPAKCPL*CPSSYH Trigger: GTGGTATGAACTTGGGCACAAGAGAGGACATTTTGC...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATTGGCACACCGGATCTaGCAGCCTTCCTTGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LRMDQHVSTKLKRTKNARLAHRI*QPSLGI Trigger: GATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGGAAGAGGAGGCAGCTCCGTTTTCCAACCCACTGCTTTTCAGTCCCTGTCATTACTGCCATCTTaGGTCAGGCCTAATAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKGRGGSSVFQPTAFQSLSLLPS*VRPNKT Trigger: AGTTTTATTAGGCCTGACCAAAGATGGCAGTAATGA...CAGGGACTGAAAAGCAGTGGGTTGGAAAACGGAGCTGCCTCCTCTTCCTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS TCA 90 bp | TTTCGTCCTCAGGCAGGAAGAGACCCTTGGCTTTATCCATCACCATaGGGCCTTCATCACGGATTAACTTCCAGTTTCTCTCTAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FRPQAGRDPWLYPSP*GLHHGLTSSFSLKT Trigger: AGTCTTTAGAGAGAAACTGGAAGTTAATCCGTGATGAAGGCCTCATGGTGATGGATAAAGCCAAGGGTCTCTTCCTGCCTGAGGACGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGTGGTTCATCATAGTCTaGGTGTCTTACTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HNQVFCPLNAGTSSVLSWWFIIV*VSYFLC Trigger: GCAGAGGAAGTAAGACACCAAGACTATGATGAACCA...CCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078139.13 |
||
| CDS-3UTR CAA 90 bp | TCAGACAACCCACCCCTGTTGCATAGCATGGCACATATTTGTAGAGACAAGGCTTGGTTCATCATAGTCTaGGTGTCTTACTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SDNPPLLHSMAHICRDKAWFIIV*VSYFLC Trigger: GCAGAGGAAGTAAGACACCAAGACTATGATGAACCA...AGCCTTGTCTCTACAAATATGTGCCATGCTATGCAACAGGGGTGGGTTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CAA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCATCTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSIWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGAT...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAATCTTCACACTGCGCTTaGCCATATCTTGCTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CIYITLKTHTGTLSRFCKSSHCA*PYLARG Trigger: CCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGA...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TCATGGTACTTGGACTTCTATCTCCACACCCAAAAGGAACCAGAAAGGCAGCCTATGCTCTCAGATATCTaGTTCTGTGCCTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWYLDFYLHTQKEPERQPMLSDI*FCAFRM Trigger: CATCCTGAAGGCACAGAACAAGATATCTGAGAGCAT...AGGCTGCCTTTCTGGTTCCTTTTGGGTGTGGAGATAGAAGTCCAAGTACCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAATGCTCTCAGATATCTaGTTCTGTGCCTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRNGSQPPCIGSQTENSKMLSDI*FCAFRM Trigger: CATCCTGAAGGCACAGAACAAGATATCTGAGAGCAT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | TTCTCCTGCCAGCCCATCTGCTTCAAGGTCATGGTCTGTGTGTACTaGTTCCTGAAGAAGGGACTGAATTTGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCQPICFKVMVCVY*FLKKGLNLFLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTTCAGGAATCAGTACACACAGACCATGACCTTGAAGCAGATGGGCTGGCAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS TCA 90 bp | CAAATCCAAAATGACACAGGTCTTTCCCTGAACCCCTTCATTCTGTaGCGTACCATCAACACCATCTGCAGTTTCGCTTTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QIQNDTGLSLNPFIL*RTINTICSFAFFFL Trigger: GAGGAAGAAGAAAGCGAAACTGCAGATGGTGTTGATGGTACGTCACAGAATGAAGGGGTTCAGGGAAAGACCTGTGTCATTTTGGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACCCTTCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MAGGSPQTTCQLAVFFANPSNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGAAGG...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCGGTGGCTCTCCTCAAACCACATGTCAGCTAGCTGTCTTCTTTGCTAACAAGAAGGGACTGAATTaGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MAGGSPQTTCQLAVFFANKKGLN*FLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTT...GTTAGCAAAGAAGACAGCTAGCTGACATGTGGTTTGAGGAGAGCCACCGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGAACTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLNWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGTT...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TGCATATACATCACTCTAAAGACTCACACAGGAACCCTCTCCAGGTTTTGCAAACACTTATATGCCTCTTaGTTCCCGACCCTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CIYITLKTHTGTLSRFCKHLYAS*FPTLCM Trigger: CATGCAGAGGGTCGGGAACAAAGAGGCATATAAGTG...TTTGCAAAACCTGGAGAGGGTTCCTGTGTGAGTCTTTAGAGTGATGTATATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGACCAAGAATGCAAGATGAAATGCCAAAGACCAGCCTACTTCCTTATCCAGCAAAATGTCCTCTCTaGTGCCCAAGTTCATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGPRMQDEMPKTSLLPYPAKCPL*CPSSYH Trigger: GTGGTATGAACTTGGGCACAAGAGAGGACATTTTGC...TGGATAAGGAAGTAGGCTGGTCTTTGGCATTTCATCTTGCATTCTTGGTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGCTCATTCTTCCTTCCTaGCTGCCACAGTGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLLILPS*LPQCEL Trigger: CAGTTCACACTGTGGCAGCAAGGAAGGAAGAATGAG...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGAATCTTGCAGCCTTCCTaGGGGATCACTAACCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRMDQHVSTKLKRTKNARILQPS*GITNPR Trigger: TCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGAT...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGATGGATCAGCATGTAAGTACCAAGCTAAAGAGGACCAAGAATGCAAGATCAAAGATGAGCACCTaGCCTTCTTCCCACGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRMDQHVSTKLKRTKNARSKMST*PSSHVL Trigger: CAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGA...TCTTGCATTCTTGGTCCTCTTTAGCTTGGTACTTACATGCTGATCCATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTTGGCCACAATGAACCCTCACTTCCCAGAGTTTTGAAACAGATTACATGTGTCCTCCGTGCTTaGCCTCTTTATCTTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEVGHNEPSLPRVLKQITCVLRA*PLYLQP Trigger: TGGCTGAAGATAAAGAGGCAAAGCACGGAGGACACA...TGTAATCTGTTTCAAAACTCTGGGAAGTGAGGGTTCATTGTGGCCAACTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS GCA 90 bp | CTGCTCATTCGTCATCTCTTCCATGTCATTTGGATGGTTCTGCGATaGTGTGTCTTCCACATGGTAAGTATCCTCGATTTCTTCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLIRHLFHVIWMVLR*CVFHMVSILDFFMN Trigger: GTTCATGAAGAAATCGAGGATACTTACCATGTGGAAGACACAGCATCGCAGAACCATCCAAATGACATGGAAGAGATGACGAATGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AAGAATATCAGTACAGATATGCACAACCCCTACCCTCTCAGCATACCAGGGCCTAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNISTDMHNPYPLSIPGPRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...AGGCCCTGGTATGCTGAGAGGGTAGGGGTTGTGCATATCTGTACTGATATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRNGSQPPCIGSQTENSKRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCTGGTTCATCATAGTCTaGGTGTCTTACTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSWFIIV*VSYFLC Trigger: GCAGAGGAAGTAAGACACCAAGACTATGATGAACCA...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAACTCTTCTGCATCCTGTaGTTTCGGAAAACTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LRNGSQPPCIGSQTENSKLFCIL*FRKTFL Trigger: TAGAAAAGTTTTCCGAAACAACAGGATGCAGAAGAG...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACAATCTTGCAGCCTTCCTaGGGGATCACTAACCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IVLLVRPSADFHELLFKTILQPS*GITNPR Trigger: TCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGAT...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATTCAAAGATGAGCACCTaGCCTTCTTCCCACGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDSKMST*PSSHVL Trigger: CAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGA...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGATCAGGATCATATGGGTGGCATTATCTGAAGTCACAACTGCCCCACTGTCATTACTGCCATCTTaGGTCAGGCCTAATAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RMIRIIWVALSEVTTAPLSLLPS*VRPNKT Trigger: AGTTTTATTAGGCCTGACCAAAGATGGCAGTAATGA...CAGTGGGGCAGTTGTGACTTCAGATAATGCCACCCATATGATCCTGATCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
||
| CDS CCA 90 bp | CAGAGGCGACATTTATTTCTTCTGAGATTATGCTGGAATCATCTATaGTGTTATCTGAAATCGCGACCCCTTCATGCTCTGAGGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRRHLFLLRLCWNHL*CYLKSRPLHALRVH Trigger: ATGAACCCTCAGAGCATGAAGGGGTCGCGATTTCAGATAACACCATAGATGATTCCAGCATAATCTCAGAAGAAATAAATGTCGCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWPLLPF*CPPCFA Trigger: GGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGG...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | TGGCTAATATGGATCATTTTCCCAGTCGGAGCAATCCCAGATTTCCTCTGCCCTCCTTCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLIWIIFPVGAIPDFLCPPSNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGAAGG...AGGGCAGAGGAAATCTGGGATTGCTCCGACTGGGAAAATGATCCATATTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATGGATCCCAGCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAAAGAAGGGACTGAATTaGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNGSQPPCIGSQTENSKKKGLN*FLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTT...TTTGCTGTTCTCTGTCTGACTTCCTATGCATGGGGGCTGGGATCCATTTCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTTCTGCCCCTTAAATGCAGGCACTAGTTCTGTGCTGTCATGGGTGACAAAGAAGGGACTGAATTaGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVFCPLNAGTSSVLSWVTKKGLN*FLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTT...TGTCACCCATGACAGCACAGAACTAGTGCCTGCATTTAAGGGGCAGAAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACACTCATTCTTCCTTCCTaGCTGCCACAGTGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: IVLLVRPSADFHELLFKTLILPS*LPQCEL Trigger: CAGTTCACACTGTGGCAGCAAGGAAGGAAGAATGAG...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | GCTGTTCTTCAACAGAGGCGACATTTATTTCTTCTGAGATTATGCTaGAATCATCTATGGTGTTATCTGAAATCGCGACCCCTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVLQQRRHLFLLRLC*NHLWCYLKSRPLHA Trigger: AGCATGAAGGGGTCGCGATTTCAGATAACACCATAGATGATTCCAGCATAATCTCAGAAGAAATAAATGTCGCCTCTGTTGAAGAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATGCAAAATGTCCTCTCTaGTGCCCAAGTTCATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDAKCPL*CPSSYH Trigger: GTGGTATGAACTTGGGCACAAGAGAGGACATTTTGC...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | TTCCTTGAAGTACCTCTGATAAGTTATAACGGAAGTCCTTTGCTTTaGCTAGAACTTCTTCATAATCGACCAAGTCAAACCACACGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FLEVPLISYNGSPLL*LELLHNRPSQTTRQ Trigger: CTGTCGTGTGGTTTGACTTGGTCGATTATGAAGAAGTTCTAGCCAAAGCAAAGGACTTCCGTTATAACTTATCAGAGGTACTTCAAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084912.12 ENSMUST00000131605.2 ENSMUST00000146441.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAATCAAACATGCCTGTCAACGCTGGTTCAGTATAAAATGAGATGGCTGAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSNQTCLSTLVQYKMRWLRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...CAGCCATCTCATTTTATACTGAACCAGCGTTGACAGGCATGTTTGATTTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATAATAAAAACACCAGTGTATAAAGGAAGAGGCTCATCCCTTGGACCCAGCAGCAAGAAGGGACTGAATTaGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IIKTPVYKGRGSSLGPSSKKGLN*FLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTT...GCTGCTGGGTCCAAGGGATGAGCCTCTTCCTTTATACACTGGTGTTTTTATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAATCTGGTGGTGTGTCTaGCTGTTCTTCAACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ETDYIQKFRETDFSHLPVIWWCV*LFFNRG Trigger: GCCTCTGTTGAAGAACAGCAAGACACACCACCAGAT...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 |
||
| CDS-3UTR CAA 90 bp | ATTCACAGAATTTACTTATTGAGCACCAATAAACACATCCAGTGGCTAATATGGTTAGACTTGGAACTCTaGTCAGAGCTGGCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IHRIYLLSTNKHIQWLIWLDLEL*SELAFS Trigger: GGAGAAAGCCAGCTCTGACAAGAGTTCCAAGTCTAA...CCATATTAGCCACTGGATGTGTTTATTGGTGCTCAATAAGTAAATTCTGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS GCA 90 bp | TTGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTGGTGGTGTGTCTTaGTGTTCTTCAACAGAGGCGACATTTATTTCTTCTGAGATTATG | + |
|
Preference number: 5 (lower is better) Translates to: LFRSLGFFFLTGGVS*CSSTEATFISSEIM Trigger: CATAATCTCAGAAGAAATAAATGTCGCCTCTGTTGAAGAACAGCAAGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | ATCGTGTTGCTTGTCAGACCATCAGCTGACTTTCATGAATTGCTTTTTAAGACACTCTTCTGCATCCTGTaGTTTCGGAAAACTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: IVLLVRPSADFHELLFKTLFCIL*FRKTFL Trigger: TAGAAAAGTTTTCCGAAACAACAGGATGCAGAAGAG...TGTCTTAAAAAGCAATTCATGAAAGTCAGCTGATGGTCTGACAAGCAACACGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATCTCTTCTGCATCCTGTaGTTTCGGAAAACTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDLFCIL*FRKTFL Trigger: TAGAAAAGTTTTCCGAAACAACAGGATGCAGAAGAG...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | CTTATCAAATTTGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTGGTaGTGTGTCTTGCTGTTCTTCAACAGAGGCGACATTTATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIKFVQKFRLLLLNW*CVLLFFNRGDIYFF Trigger: GAAGAAATAAATGTCGCCTCTGTTGAAGAACAGCAAGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAATTTGATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 90 bp | TGTCTTATCAAATTTGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTaGTGGTGTGTCTTGCTGTTCTTCAACAGAGGCGACATTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLIKFVQKFRLLLLN*WCVLLFFNRGDIYF Trigger: GAAATAAATGTCGCCTCTGTTGAAGAACAGCAAGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAATTTGATAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | CATTATTCTGAGGGGAGGAAGATGGAAAAGCACTGCAAATTCATAATCAAGGATAAGAAGGGACTGAATTaGTTCCTTTACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HYSEGRKMEKHCKFIIKDKKGLN*FLYFIF Trigger: GAAGATGAAGTAAAGGAACAAATTCAGTCCCTTCTT...ATCCTTGATTATGAATTTGCAGTGCTTTTCCATCTTCCTCCCCTCAGAATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAGATTACATACAGAAGTTCAGAGAAACTGATTTCAGCCATTTACCAGTAAGGCCTAATAAAACTTaGGCATCATCCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETDYIQKFRETDFSHLPVRPNKT*ASSTSK Trigger: CTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCT...TACTGGTAAATGGCTGAAATCAGTTTCTCTGAACTTCTGTATGTAATCTGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 |
||
| CDS GCA 72 bp | GAGCCCCGGGGCTACTGCTGCTACCGCTGCTACCCGTaGTCGGGCTACCGCTGCCCGAGCCGCTGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPRGYCCYRCYP*SGYRCPSRCRC Trigger: GCAGCGGCAGCGGCTCGGGCAGCGGTAGCCCGAGCACGGGTAGCAGCGGTAGCAGCAGTAGCCCCGGGGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS GCA 72 bp | CTTCACCAGGTCTGTAGGGGCATCAGGCAGGTCGGCTaGCTCCTGGTAGGTCTCGATGGCCCTGCGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LHQVCRGIRQVG*LLVGLDGPAQN Trigger: GTTCTGCGCAGGGCCATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGATGCCCCTACAGACCTGGTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 72 bp | CCCTCCTCTTCTCCCATTCTTGTGTCCTCCGTGCTTTaGCTCTCTCCGAGCCCCGGGGCTACTGCTGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSPILVSSVL*LSPSPGATAAT Trigger: GGTAGCAGCAGTAGCCCCGGGGCTCGGAGAGAGGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS GCA 72 bp | GCAGGTCGGCTGCCTCCTGGTAGGTCTCGATGGCCCTaGGCAGAACCTCATTGCTTCTCTGCTTCTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRLPPGRSRWP*AEPHCFSASLP Trigger: TGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGGAGGCAGCCGACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 72 bp | TGTGAGGAAGTCCTCAACCTCCGGCTGTGGTTCTCCTaGCAGCCCATCTGCTTCAAGGTCTGCCCCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CEEVLNLRLWFS*QPICFKVCPLR Trigger: CCTGAGGGGGCAGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
||
| CDS CAA 90 bp | CTCCTGAAATCCCTCCTCTTCTCCCATTCTTGTGTCCTCCGTGCTTaGCCTCTCTCCGAGCCCCGGGGCTACTGCTGCTACCGCTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLKSLLFSHSCVLRA*PLSEPRGYCCYRCY Trigger: GTAGCAGCGGTAGCAGCAGTAGCCCCGGGGCTCGGAGAGAGGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGGATTTCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
||
| CDS CCA 72 bp | CATCAGGCAGGTCGGCTGCCTCCTGGTAGGTCTCGATaGCCCTGCGCAGAACCTCATTGCTTCTCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HQAGRLPPGRSR*PCAEPHCFSAS Trigger: AGAAGCAGAGAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGGAGGCAGCCGACCTGCCTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | GTCGGTCACTGTGAGGAAGTCCTCAACCTCCGGCTGTaGTTCTCCTGCCAGCCCATCTGCTTCAAGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGHCEEVLNLRL*FSCQPICFKVC Trigger: GCAGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108333.8 |
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| CDS TCA 72 bp | GCTGAGGGGTCAGCTCGGGGTGCCACACATCCACGATaGATATCAGCCGGAAAGACGAGGCATCCTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AEGSARGATHPR*ISAGKTRHPAK Trigger: TTTGGCAGGATGCCTCGTCTTTCCGGCTGATATTCATCGTGGATGTGTGGCACCCCGAGCTGACCCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | GTCGGTCACTGTGAGGAAGTCCTCAACCTCCGGCTGTaGTTCTCCTGCCAGCCCATCTGCTTCAAGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: VGHCEEVLNLRL*FSCQPICFKVM Trigger: CATGACCTTGAAGCAGATGGGCTGGCAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | AAGGACCCTCCTGAAATCCCTCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCCTCTCTCCGAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KDPPEIPPLLPF*CPPCFASLRAP Trigger: CGGGGCTCGGAGAGAGGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGGATTTCAGGAGGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000038564.13 ENSMUST00000078139.13 ENSMUST00000084912.12 ENSMUST00000084915.11 ENSMUST00000098275.9 ENSMUST00000108337.8 ENSMUST00000108340.9 ENSMUST00000146441.8 |
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| CDS CAA 90 bp | TCCCACGTCCTGGTCTCATTGGCACACCGGATCTTGCAGCCTTCCTaGGGGATCACTAACCCCAGATGCATTCGGAGCCTGCAGTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHVLVSLAHRILQPS*GITNPRCIRSLQFV Trigger: CACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCAGGACGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 90 bp | ACCTTGCCTTCTTCCCACGTCCTGGTCTCATTGGCACACCGGATCTaGCAGCCTTCCTTGGGGATCACTAACCCCAGATGCATTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLPSSHVLVSLAHRI*QPSLGITNPRCIRS Trigger: GCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCAGGACGTGGGAAGAAGGCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS GCA 72 bp | CCTTGGGGATCACTAACCCCAGATGCATTCGGAGCCTaGAGTTTGTGGGTCCTGTATGCGGCCACACATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PWGSLTPDAFGA*SLWVLYAATHE Trigger: CTCATGTGTGGCCGCATACAGGACCCACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 72 bp | TGGTCTCATTGGCACACCGGATCTTGCAGCCTTCCTTaGGGATCACTAACCCCAGATGCATTCGGAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSHWHTGSCSLP*GSLTPDAFGAC Trigger: GCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CAA 72 bp | CTGGTCTCATTGGCACACCGGATCTTGCAGCCTTCCTaGGGGATCACTAACCCCAGATGCATTCGGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVSLAHRILQPS*GITNPRCIRSL Trigger: CAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | TCTTCCCACGTCCTGGTCTCATTGGCACACCGGATCTaGCAGCCTTCCTTGGGGATCACTAACCCCAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSHVLVSLAHRI*QPSLGITNPRC Trigger: GCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAGATCCGGTGTGCCAATGAGACCAGGACGTGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | TCTCTTCCCTGCAGCGGATGCTTTCTGGGATGTGTCTaGGTCAGGCTTCTTCCTCCCCTTCCCTCTATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLPCSGCFLGCV*VRLLPPLPSIL Trigger: GAGGATAGAGGGAAGGGGAGGAAGAAGCCTGACTCAGACACATCCCAGAAAGCATCCGCTGCAGGGAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS TCA 72 bp | CCAGGTCCTCAAATCTGTCATCACTGTCGGTCACTGTaGGGAAGTCCTCAACCTCCGGCTGTGGTTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGPQICHHCRSL*GSPQPPAVVLL Trigger: CAGGAGAACCACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGACAGTGATGACAGATTTGAGGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | GGATCACTAACCCCAGATGCATTCGGAGCCTGCAGTTaGTGGGTCCTGTATGCGGCCACACATGAGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSLTPDAFGACS*WVLYAATHEFQ Trigger: CTGGAACTCATGTGTGGCCGCATACAGGACCCACAAACTGCAGGCTCCGAATGCATCTGGGGTTAGTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | CAGTTCTTTCTCTTCTGGCCATTTTCCTTGGCGACGTaGGCATGCCCAGAGGAGCTTCTTCCTCGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QFFLFWPFSLAT*ACPEELLPRLS Trigger: AGACAGGCGAGGAAGAAGCTCCTCTGGGCATGCTCACGTCGCCAAGGAAAATGGCCAGAAGAGAAAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| CDS GCA 72 bp | TTGTTCCTTTACTTCATCTTCAACATTCTGGATGTCTaGCCCCTCAGGGGCCTGCTCCTCCAGCTCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLYFIFNILDV*PLRGLLLQLSV Trigger: CACGCTGAGCTGGAGGAGCAGGCCCCTGAGGGGGCAGACATCCAGAATGTTGAAGATGAAGTAAAGGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108334.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 ENSMUST00000152526.8 |
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| CDS GCA 72 bp | CCTGGTAGGTCTCGATGGCCCTGCGCAGAACCTCATTaGTTCTCTGCTTCTCTGCCAAGTCATCTTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: PGRSRWPCAEPH*FSASLPSHLHT Trigger: AGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAGGGCCATCGAGACCTACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | TTGTCTCTGTCTCTCTTCCCTGCAGCGGATGCTTTCTaGGATGTGTCTGAGTCAGGCTTCTTCCTCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSLFPAADAF*DVSESGFFLPF Trigger: GAAGGGGAGGAAGAAGCCTGACTCAGACACATCCCAGAAAGCATCCGCTGCAGGGAAGAGAGACAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| CDS CAA 72 bp | TCCCGAAGGTTTTCGTCCTCAGGCAGGAAGAGACCCTaGGCTTTATCCATCACCATGAGGCCTTCATCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRFSSSGRKRP*ALSITMRPSSR Trigger: CCGTGATGAAGGCCTCATGGTGATGGATAAAGCCAAGGGTCTCTTCCTGCCTGAGGACGAAAACCTTCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | AGGCATTCTCATTCTTCCTTCCTTGCTGCCACAGTGTaGACTGGCTCCAGTCGCCCTTCTCCCGAAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RHSHSSFLAATV*TGSSRPSPEGF Trigger: AAAACCTTCGGGAGAAGGGCGACTGGAGCCAGTTCACACTGTGGCAGCAAGGAAGGAAGAATGAGAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS GCA 72 bp | GGCCCTGCGCAGAACCTCATTGCTTCTCTGCTTCTCTaGCAAGTCATCTTCACACTGCGCTTTGCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: GPAQNLIASLLL*QVIFTLRFAIS Trigger: AGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAGAGAAGCAATGAGGTTCTGCGCAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 90 bp | TCGCCCTTCTCCCGAAGGTTTTCGTCCTCAGGCAGGAAGAGACCCTaGGCTTTATCCATCACCATGAGGCCTTCATCACGGATTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPFSRRFSSSGRKRP*ALSITMRPSSRINF Trigger: GAAGTTAATCCGTGATGAAGGCCTCATGGTGATGGATAAAGCCAAGGGTCTCTTCCTGCCTGAGGACGAAAACCTTCGGGAGAAGGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 90 bp | TCCTGCCAAACCTCGTGCTCAAAAGAGTCATCAAAGATGAGCACCTaGCCTTCTTCCCACGTCCTGGTCTCATTGGCACACCGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCQTSCSKESSKMST*PSSHVLVSLAHRIL Trigger: CAAGATCCGGTGTGCCAATGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | ACTAGTCTCTGGAGGGTAAGTAGAGAACCTCTCATGTaGCCTAGAAACTGCTGCCGTTCCGACCTTCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSLWRVSREPLM*PRNCCRSDLRF Trigger: GAAGCGAAGGTCGGAACGGCAGCAGTTTCTAGGTCACATGAGAGGTTCTCTACTTACCCTCCAGAGACTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | AGCCTGCAGTTTGTGGGTCCTGTATGCGGCCACACATaGGTTCCAGGGTGCATGATGGAGTATTTGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLQFVGPVCGHT*VPGCMMEYLIC Trigger: ACAGATCAAATACTCCATCATGCACCCTGGAACTCATGTGTGGCCGCATACAGGACCCACAAACTGCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS TCA 72 bp | CCTGCCAAACCTCGTGCTCAAAAGAGTCATCAAAGATaGGCACCTTGCCTTCTTCCCACGTCCTGGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAKPRAQKSHQR*APCLLPTSWSH Trigger: ATGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS GCA 72 bp | TACTGGTTCATCATAGTCTTGGTGTCTTACTTCCTCTaGATGGGGCAGCAGCACACCTGCATCTGTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: YWFIIVLVSYFL*MGQQHTCICHC Trigger: GCAGTGACAGATGCAGGTGTGCTGCTGCCCCATGCAGAGGAAGTAAGACACCAAGACTATGATGAACCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
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| CDS GCA 72 bp | TGCCAAGTCATCTTCACACTGCGCTTTGCCATATCTTaGTCGTGGGCTCTGAGGGTACTTTCGAACCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CQVIFTLRFAIS*SWALRVLSNQF Trigger: GAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS GCA 72 bp | TCTGCTTCTCTGCCAAGTCATCTTCACACTGCGCTTTaGCATATCTTGCTCGTGGGCTCTGAGGGTACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SASLPSHLHTAL*HILLVGSEGTF Trigger: GAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS GCA 72 bp | ATCAGCCGGAAAGACGAGGCATCCTGCCAAACCTCGTaGTCAAAAGAGTCATCAAAGATGAGCACCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISRKDEASCQTS*SKESSKMSTLP Trigger: AGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGTTTGGCAGGATGCCTCGTCTTTCCGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | ACCACTTATATGCCTCTTTGTTCCCGACCCTCTGCATaGCATCCCCCAAGTGGAAGTAAAACCGGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: TTYMPLCSRPSA*HPPSGSKTGHH Trigger: ATGATGGCCGGTTTTACTTCCACTTGGGGGATGCCATGCAGAGGGTCGGGAACAAAGAGGCATATAAGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | CTGCCAAGTCATCTTCACACTGCGCTTTGCCATATCTaGCTCGTGGGCTCTGAGGGTACTTTCGAACCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPSHLHTALCHI*LVGSEGTFEPV Trigger: AACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | ACCTCGTGCTCAAAAGAGTCATCAAAGATGAGCACCTaGCCTTCTTCCCACGTCCTGGTCTCATTGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TSCSKESSKMST*PSSHVLVSLAH Trigger: GTGTGCCAATGAGACCAGGACGTGGGAAGAAGGCAAGGTGCTCATCTTTGATGACTCTTTTGAGCACGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | AAGGACCCTCCTGAAATCCCTCCTCTTCTCCCATTCTaGTGTCCTCCGTGCTTTGCCTCTTTATCTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDPPEIPPLLPF*CPPCFASLSSA Trigger: GGCTGAAGATAAAGAGGCAAAGCACGGAGGACACAAGAATGGGAGAAGAGGAGGGATTTCAGGAGGGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000103004.10 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000152526.8 |
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| CDS TCA 72 bp | TCACACTGCGCTTTGCCATATCTTGCTCGTGGGCTCTaGGGGTACTTTCGAACCAGTTCTTCAAATGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHCALPYLARGL*GYFRTSSSNAF Trigger: GAACGCATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | ACGGCCTTCTTCCAGCTTTCCTTAGACTTGGAACTCTaGTCAGAGCTGGCTTTCTCCTTGTCTCTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TAFFQLSLDLEL*SELAFSLSLSL Trigger: GAGAGACAGAGACAAGGAGAAAGCCAGCTCTGACAAGAGTTCCAAGTCTAAGGAAAGCTGGAAGAAGGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS CAA 90 bp | GAAACAGCCTTTGTCTCTACGGCCTTCTTCCAGCTTTCCTTAGACTaGGAACTCTTGTCAGAGCTGGCTTTCTCCTTGTCTCTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETAFVSTAFFQLSLD*ELLSELAFSLSLSL Trigger: GAGAGACAGAGACAAGGAGAAAGCCAGCTCTGACAAGAGTTCCAAGTCTAAGGAAAGCTGGAAGAAGGCCGTAGAGACAAAGGCTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| CDS CAA 90 bp | TCTGCTTCTCTGCCAAGTCATCTTCACACTGCGCTTTGCCATATCTaGCTCGTGGGCTCTGAGGGTACTTTCGAACCAGTTCTTCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SASLPSHLHTALCHI*LVGSEGTFEPVLQM Trigger: CATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGACTTGGCAGAGAAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | GTCATCTTCACACTGCGCTTTGCCATATCTTGCTCGTaGGCTCTGAGGGTACTTTCGAACCAGTTCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VIFTLRFAISCS*ALRVLSNQFFK Trigger: TTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGCAAGATATGGCAAAGCGCAGTGTGAAGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
||
| CDS CCA 72 bp | CTGCCAGCCCATCTGCTTCAAGGTCTAATAAAACTTTaGCATCATCCACATCAAAGTCTCCATCGCCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPAHLLQGLIKL*HHPHQSLHRHP Trigger: CGGATGGCGATGGAGACTTTGATGTGGATGATGCCAAAGTTTTATTAGACCTTGAAGCAGATGGGCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108335.8 |
||
| CDS CCA 72 bp | TCTTGGCTAACCCACCAGGTCCTTCTAATAAAACTTTaGCATCATCCACATCAAAGTCTCCATCGCCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: SWLTHQVLLIKL*HHPHQSLHRHP Trigger: CGGATGGCGATGGAGACTTTGATGTGGATGATGCCAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 ENSMUST00000108333.8 ENSMUST00000152526.8 |
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| CDS CAA 72 bp | CTCTTGGCTAACCCACCAGGTCCTTCTAATAAAACTTaGGCATCATCCACATCAAAGTCTCCATCGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLANPPGPSNKT*ASSTSKSPSPS Trigger: GGATGGCGATGGAGACTTTGATGTGGATGATGCCAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 ENSMUST00000108333.8 ENSMUST00000152526.8 |
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| CDS CAA 72 bp | TTTGTCTCTACGGCCTTCTTCCAGCTTTCCTTAGACTaGGAACTCTTGTCAGAGCTGGCTTTCTCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FVSTAFFQLSLD*ELLSELAFSLS Trigger: AGACAAGGAGAAAGCCAGCTCTGACAAGAGTTCCAAGTCTAAGGAAAGCTGGAAGAAGGCCGTAGAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
||
| CDS GCA 72 bp | CGTCATCTCTTCCATGTCATTTGGATGGTTCTGCGATaGTGTGTCTTCCACATGGTAAGTATCCTCGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHLFHVIWMVLR*CVFHMVSILDF Trigger: GAAATCGAGGATACTTACCATGTGGAAGACACAGCATCGCAGAACCATCCAAATGACATGGAAGAGATGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS GCA 72 bp | GCATCTGTCACTGCTTCACTGGGATCTGAATTTTCCTaGTCATTCGTCATCTCTTCCATGTCATTTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASVTASLGSEFS*SFVISSMSFGW Trigger: CCATCCAAATGACATGGAAGAGATGACGAATGAGCAGGAAAATTCAGATCCCAGTGAAGCAGTGACAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 |
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| CDS CAA 72 bp | TCATTACTGCCATCTTTGGTCAGGCCTAATAAAACTTaGGCATCATCCACATCAAAGTCTCCATCGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: SLLPSLVRPNKT*ASSTSKSPSPS Trigger: GGATGGCGATGGAGACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCTGACCAAAGATGGCAGTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098275.9 ENSMUST00000131605.2 ENSMUST00000146441.8 |
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| CDS CAA 90 bp | AGCTCTTCTTTGATGGGTTCTTTAGCTTTAGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCTTCTAATAAAACTTTGGCATCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSSLMGSLALALVFL*ANPPGPSNKTLASS Trigger: GGATGATGCCAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGCTAAAGCTAAAGAACCCATCAAAGAAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| CDS CAA 90 bp | TCAGAAGGAGATCTTTCTTTAAGGCCTTTAGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCTTCTAATAAAACTTTGGCATCATCC | + |
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Preference number: 6 (lower is better) Translates to: SEGDLSLRPLALVFL*ANPPGPSNKTLASS Trigger: GGATGATGCCAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGCTAAAGGCCTTAAAGAAAGATCTCCTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108333.8 ENSMUST00000152526.8 |
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| CDS TCA 72 bp | TACTGGTTCATCATAGTCTTGGTGTCTTACTTCCTCTaGATTTTCCTGCTCATTCGTCATCTCTTCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: YWFIIVLVSYFL*IFLLIRHLFHV Trigger: GACATGGAAGAGATGACGAATGAGCAGGAAAATTCAGAGGAAGTAAGACACCAAGACTATGATGAACCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | CAACAGAGGCGACATTTATTTCTTCTGAGATTATGCTaGAATCATCTATGGTGTTATCTGAAATCGCGACCC | + |
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Preference number: 6 (lower is better) Translates to: QQRRHLFLLRLC*NHLWCYLKSRP Trigger: GGGTCGCGATTTCAGATAACACCATAGATGATTCCAGCATAATCTCAGAAGAAATAAATGTCGCCTCTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | TTTGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTGGTaGTGTGTCTTGCTGTTCTTCAACAGAGGCGACATT | + |
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Preference number: 6 (lower is better) Translates to: FVQKFRLLLLNW*CVLLFFNRGDI Trigger: AATGTCGCCTCTGTTGAAGAACAGCAAGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | AAATTTGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTaGTGGTGTGTCTTGCTGTTCTTCAACAGAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: KFVQKFRLLLLN*WCVLLFFNRGD Trigger: GTCGCCTCTGTTGAAGAACAGCAAGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 90 bp | AGCTTTTCTGCAGCATCCAGCTCAGCCTTAATTGTCTTATCAAATTaGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTGGTGGTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFSAASSSALIVLSN*FRSLGFFFLTGGVS Trigger: AGACACACCACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAATTTGATAAGACAATTAAGGCTGAGCTGGATGCTGCAGAAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CCA 72 bp | CATTTATTTCTTCTGAGATTATGCTGGAATCATCTATaGTGTTATCTGAAATCGCGACCCCTTCATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HLFLLRLCWNHL*CYLKSRPLHAL Trigger: CAGAGCATGAAGGGGTCGCGATTTCAGATAACACCATAGATGATTCCAGCATAATCTCAGAAGAAATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | TTGATGGGTTCTTTAGCTTTAGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCTTCTAATAAAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: LMGSLALALVFL*ANPPGPSNKTL Trigger: CAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGCTAAAGCTAAAGAACCCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038564.13 ENSMUST00000103004.10 |
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| CDS CAA 72 bp | GATCTTTCTTTAAGGCCTTTAGCCTTAGTTTTCCTCTaGGCTAACCCACCAGGTCCTTCTAATAAAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: DLSLRPLALVFL*ANPPGPSNKTL Trigger: CAAAGTTTTATTAGAAGGACCTGGTGGGTTAGCCAAGAGGAAAACTAAGGCTAAAGGCCTTAAAGAAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108333.8 ENSMUST00000152526.8 |
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| CDS CAA 90 bp | CTAGTTTTCCTTGAAGTACCTCTGATAAGTTATAACGGAAGTCCTTaGCTTTGGCTAGAACTTCTTCATAATCGACCAAGTCAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: LVFLEVPLISYNGSP*LWLELLHNRPSQTT Trigger: TGTGGTTTGACTTGGTCGATTATGAAGAAGTTCTAGCCAAAGCAAAGGACTTCCGTTATAACTTATCAGAGGTACTTCAAGGAAAACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084912.12 ENSMUST00000131605.2 ENSMUST00000146441.8 |
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| CDS GCA 72 bp | CTTCAACAGAGGCGACATTTATTTCTTCTGAGATTATaGTGGAATCATCTATGGTGTTATCTGAAATCGCGA | + |
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Preference number: 6 (lower is better) Translates to: LQQRRHLFLLRL*WNHLWCYLKSR Trigger: TCGCGATTTCAGATAACACCATAGATGATTCCAGCATAATCTCAGAAGAAATAAATGTCGCCTCTGTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000078139.13 ENSMUST00000084915.11 ENSMUST00000108333.8 ENSMUST00000108334.8 ENSMUST00000108335.8 ENSMUST00000108337.8 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 72 bp | GCAGCATCCAGCTCAGCCTTAATTGTCTTATCAAATTaGTTCAGAAGTTTAGGCTTCTTCTTCTTAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: AASSSALIVLSN*FRSLGFFFLTG Trigger: ACCAGTTAAGAAGAAGAAGCCTAAACTTCTGAACAAATTTGATAAGACAATTAAGGCTGAGCTGGATGCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078139.13 ENSMUST00000108339.8 ENSMUST00000108340.9 |
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| CDS CAA 90 bp | GTAAGGACTTCCTCAAGAGAATCAATATTTTCATTACTGCCATCTTaGGTCAGGCCTAATAAAACTTTGGCATCATCCACATCAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: VRTSSRESIFSLLPS*VRPNKTLASSTSKS Trigger: AGACTTTGATGTGGATGATGCCAAAGTTTTATTAGGCCTGACCAAAGATGGCAGTAATGAAAATATTGATTCTCTTGAGGAAGTCCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098275.9 ENSMUST00000146441.8 |
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