Pregenerated sensors for ASPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037686Ensembl transcript IDs: ENSMUST00000079400.6, ENSMUST00000220719.2, ENSMUST00000222970.2, ENSMUST00000223184.2, ENSMUST00000223412.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGGTCTGGCTTGGTGGGCCCATTCCCAGAGCCGAAGGTCTCCATaGCCACGCCTTTCAGTGGGGGCTGGAGGAAGGTCCGGACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: VGLAWWAHSQSRRSP*PRLSVGAGGRSGLV Trigger: CACAAGTCCGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTCATGGAGACCTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR TCA 90 bp | CCCTGGCTGGCCCAGCACATAGGACAGTTTGGCCAGGGCAGCCTCTaGTGTCATGTCGAAGCCCGAGACTATGCCAGCTCCTGCCATGGC | + |
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Preference number: 1 (lower is better) Translates to: PWLAQHIGQFGQGSL*CHVEARDYASSCHG Trigger: GCCATGGCAGGAGCTGGCATAGTCTCGGGCTTCGACATGACATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGCTGGGCCAGCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR CCA 90 bp | TGTCATTCAGGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTaGCCAGGGCAGCCTCTGATGTCATGTCGAAGCCCGAGACTATGC | + |
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Preference number: 1 (lower is better) Translates to: CHSGSALAGPAHRTV*PGQPLMSCRSPRLC Trigger: GCATAGTCTCGGGCTTCGACATGACATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAATGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR GCA 90 bp | GTCGAAGCCCGAGACTATGCCAGCTCCTGCCATGGCCATGCCAGATaGATAGTCCGAAGTCACAGCCCCCTGAAGGCAATGGGTACAGTT | + |
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Preference number: 1 (lower is better) Translates to: VEARDYASSCHGHAR*IVRSHSPLKAMGTV Trigger: AACTGTACCCATTGCCTTCAGGGGGCTGTGACTTCGGACTATGCATCTGGCATGGCCATGGCAGGAGCTGGCATAGTCTCGGGCTTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR TCA 90 bp | GCAGGCCTAGACCTTTCCAGTTACTCAGCTCAAGACTGGATAGGGTaGAGATCTGAGATGGGCTTCTGCCACGTGAAGCCTCAGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AGLDLSSYSAQDWIG*RSEMGFCHVKPQQP Trigger: AGGCTGCTGAGGCTTCACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATCCAGTCTTGAGCTGAGTAACTGGAAAGGTCTAGGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR GCA 90 bp | GGCCATGGTGTCTGTGCCATGGATGACAACAAAGCCCTGGTACTGTaGGTAGTGTCTTTCAAAGAAGGAGAGGGTGTGAGCCCCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GHGVCAMDDNKALVL*VVSFKEGEGVSPKD Trigger: GTCCTTGGGGCTCACACCCTCTCCTTCTTTGAAAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
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| 3UTR TCA 90 bp | AGACCTTTCCAGTTACTCAGCTCAAGACTGGATAGGGTGAAGATCTaGGATGGGCTTCTGCCACGTGAAGCCTCAGCAGCCTCTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RPFQLLSSRLDRVKI*DGLLPREASAASVS Trigger: GGAGACAGAGGCTGCTGAGGCTTCACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATCCAGTCTTGAGCTGAGTAACTGGAAAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR TCA 90 bp | AAGAGAGCACTGAGGCAGCAAAGGCCATGGTGTCTGTGCCATGGATaGCAACAAAGCCCTGGTACTGTGCGTAGTGTCTTTCAAAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: KRALRQQRPWCLCHG*QQSPGTVRSVFQRR Trigger: CCTTCTTTGAAAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCCTTTGCTGCCTCAGTGCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
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| 3UTR CCA 90 bp | TCCTGGAACACGTGGCTGGAGGAGATAGCAAGGCCAGGACAGAGCTaGTTTCTGAAACTCTTCAAGGTCTCACCAAATACAATGACGCTA | + |
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Preference number: 1 (lower is better) Translates to: SWNTWLEEIARPGQS*FLKLFKVSPNTMTL Trigger: TAGCGTCATTGTATTTGGTGAGACCTTGAAGAGTTTCAGAAACCAGCTCTGTCCTGGCCTTGCTATCTCCTCCAGCCACGTGTTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR CAA 90 bp | AGGCCTTGTTCGGCCGCCACCCGAAGCTCCTGTAGTAGGTCTGGCTaGGTGGGCCCATTCCCAGAGCCGAAGGTCTCCATGACCACGCCT | + |
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Preference number: 2 (lower is better) Translates to: RPCSAATRSSCSRSG*VGPFPEPKVSMTTP Trigger: AGGCGTGGTCATGGAGACCTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTACTACAGGAGCTTCGGGTGGCGGCCGAACAAGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGCAGCCTCTGATGTCATGTCGAAGCCCGAGACTATGCCAGCTCCTGCCAGCCGAAGGTCTCCATaGCCACGCCTTTCAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ARAASDVMSKPETMPAPASRRSP*PRLSVG Trigger: CCCCACTGAAAGGCGTGGTCATGGAGACCTTCGGCT...GGCAGGAGCTGGCATAGTCTCGGGCTTCGACATGACATCAGAGGCTGCCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATTCAGGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTGGCCAGGGGACCACGCCTTTCAGTaGGGGCTGGAGGAAGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: CHSGSALAGPAHRTVWPGDHAFQ*GLEEGP Trigger: CGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTC...CCCTGGCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAATGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGCAGCCTCTGATGTCATGTCGAAGCCCGAGACTATGCCAGCTCCTGCCGAAGTCACAGCCCCCTaGAGGCAATGGGTACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: ARAASDVMSKPETMPAPAEVTAP*RQWVQL Trigger: CAACTGTACCCATTGCCTTCAGGGGGCTGTGACTTC...GGCAGGAGCTGGCATAGTCTCGGGCTTCGACATGACATCAGAGGCTGCCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGTCATTCAGGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTGGCGACTATGCCAGCTCCTaGCATGGCCATGCCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LPVIQAQPWLAQHIGQFGDYASS*HGHARC Trigger: GCATCTGGCATGGCCATGGCAGGAGCTGGCATAGTC...GCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAATGACAGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCAGGGCCACCACATCTaGATTTCCAGCTGCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LQGALCMESRQSLEIGACQGHHI*ISSCFS Trigger: GCTGAAGCAGCTGGAAATGCAGATGTGGTGGCCCTG...GCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| 3UTR-3UTR CCA 90 bp | AGACATCTGTTGCAGGCAGCGTCATCTCCCCACGAAGATCCTTGGCCAGCAGCTGTAGGTCTGGCTTGGTaGGCCCATTCCCAGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: RHLLQAASSPHEDPWPAAVGLAW*AHSQSR Trigger: TCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTAC...AGCTGCTGGCCAAGGATCTTCGTGGGGAGATGACGCTGCCTGCAACAGATGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGCAAGACATCTGTTGCAGGCAGCGTCATCTCCCCACGAAGATCCTTGGCCTTTCAGTGGGGGCTaGAGGAAGGTCCGGACTTGT | + |
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Preference number: 2 (lower is better) Translates to: PAARHLLQAASSPHEDPWPFSGG*RKVRTC Trigger: ACAAGTCCGGACCTTCCTCCAGCCCCCACTGAAAGG...CCAAGGATCTTCGTGGGGAGATGACGCTGCCTGCAACAGATGTCTTGCTGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGTCATTCAGGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTGGCTGCCAGCTCCTGCCATaGCCATGCCAGATGCATAGT | + |
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Preference number: 2 (lower is better) Translates to: LPVIQAQPWLAQHIGQFGCQLLP*PCQMHS Trigger: ACTATGCATCTGGCATGGCCATGGCAGGAGCTGGCA...GCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAATGACAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR CCA 90 bp | TGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTGTCTCAAAAAAACCCCAGAGCAGTaGGGATGGAGGTCAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CMESRQSLEIGACPPCLKKTPEQ*GWRSAG Trigger: CCCAGCTGACCTCCATCCCCACTGCTCTGGGGTTTT...TTTGAGACAGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGACATGGGCTTCTGCCACGTaGAGCCTCAGCAGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KDLQIVVRKGWEAAEQKTWASAT*SLSSLC Trigger: ACAGAGGCTGCTGAGGCTTCACGTGGCAGAAGCCCA...TGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGAGGTGGGATAGGGTGAAGATCTaGGATGGGCTTCTGCCACGT | + |
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Preference number: 2 (lower is better) Translates to: GAKEHFLETRLAEDLQRWDRVKI*DGLLPR Trigger: ACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATC...CCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGCAGCAGGATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCAAGACTGGATAGGGTaGAGATCTGAGATGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLQQDGRFGAKEHFLETRQDWIG*RSEMGF Trigger: GAAGCCCATCTCAGATCTTCACCCTATCCAGTCTTG...CCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGCTGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTAAAACCCCAGAGCAGTaGGGATGGAGGTCAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GKAGKQLSRRQLNLGRISKTPEQ*GWRSAG Trigger: CCCAGCTGACCTCCATCCCCACTGCTCTGGGGTTTT...ACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTGCAGGATGGCAGGTTTaGGGCCAAGGAGCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GKAGKQLSRRQLNLGRISAGWQV*GQGALP Trigger: AGGAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGC...ACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACCCAGTTGCAAACCAGTaGGAGTTCACTGAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: DGRFGAKEHFLETRLAEDPVANQ*EFTEEL Trigger: TAGCTCCTCAGTGAACTCTCACTGGTTTGCAACTGG...GTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCTCTGGATAGGGTGAAGATCTaGGATGGGCTTCTGCCACGT | + |
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Preference number: 2 (lower is better) Translates to: WEAAEQKTAQLREDKSALDRVKI*DGLLPR Trigger: ACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATC...CAGAGCGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGAAACAAGGCTTGCTaGGGACTTGCAGAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: STKTFRLSCGKAGKQLSRRNKAC*GLAEVG Trigger: CCCCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCT...TCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGACAGAGCTGGTTTCTGAAACTCTTCAAGGTCTCACCAAATACAATGACGGGCTTGCTGAGGACTTaGAGAGGTGGGGCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PGQSWFLKLFKVSPNTMTGLLRT*RGGAPP Trigger: AGGGGGAGCCCCACCTCTGCAAGTCCTCAGCAAGCC...CGTCATTGTATTTGGTGAGACCTTGAAGAGTTTCAGAAACCAGCTCTGTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCTCTGGACAGAGCTGGTTTCTaGAACTCTTCAAGGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: WEAAEQKTAQLREDKSALDRAGF*NSSRSH Trigger: GTGAGACCTTGAAGAGTTTCAGAAACCAGCTCTGTC...CAGAGCGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCAGGCCAGGACAGAGCTaGTTTCTGAAACTCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: KGWEAAEQKTAQLREDKSRPGQS*FLKLFK Trigger: CTTGAAGAGTTTCAGAAACCAGCTCTGTCCTGGCCT...GGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR CAA 90 bp | GTCCCGACAACTTTATTGACATTCTTCTCAACAAAGACCTTCAGATaGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VPTTLLTFFSTKTFR*SCGKAGKQLSRRQL Trigger: GAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAAAGTTGTCGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGACAGAGCTGGTTTCTGAAACTCTTCAAGGTCTCACCAAATACAATGACGATCTGCATTTCCAGCTaGTTCAGCTACTTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PGQSWFLKLFKVSPNTMTICISS*FSYLQG Trigger: GCCCTGCAAGTAGCTGAAGCAGCTGGAAATGCAGAT...CGTCATTGTATTTGGTGAGACCTTGAAGAGTTTCAGAAACCAGCTCTGTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| 3UTR CCA 72 bp | CCGAAGGTCTCCATGACCACGCCTTTCAGTGGGGGCTaGAGGAAGGTCCGGACTTGTGACATCCGCGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PKVSMTTPFSGG*RKVRTCDIRAH Trigger: GTGGGCGCGGATGTCACAAGTCCGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTCATGGAGACCTTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR CCA 72 bp | GGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTaGCCAGGGCAGCCTCTGATGTCATGTCGAAGCCCG | + |
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Preference number: 3 (lower is better) Translates to: GSALAGPAHRTV*PGQPLMSCRSP Trigger: CGGGCTTCGACATGACATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR CCA 72 bp | GGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTaGGGCTTGCCCACCCTGTCTCAAAACCCCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: GAVYGVQAVSGD*GLPTLSQNPRA Trigger: TGCTCTGGGGTTTTGAGACAGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCGGTGCCAGGATCCAGTaGCAAACCAGTGAGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SGGAVYGVQAVSGDWGLPGARIQ*QTSESS Trigger: TGAACTCTCACTGGTTTGCAACTGGATCCTGGCACC...GGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGAAGGCTTGCTGAGGACTaGCAGAGGTGGGGCTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: TKTFRLSCGKAGKQLSRRRLAED*QRWGSP Trigger: GGGGGAGCCCCACCTCTGCAAGTCCTCAGCAAGCCT...TCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR GCA 72 bp | CGAGACTATGCCAGCTCCTGCCATGGCCATGCCAGATaGATAGTCCGAAGTCACAGCCCCCTGAAGGCAATG | + |
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Preference number: 3 (lower is better) Translates to: RDYASSCHGHAR*IVRSHSPLKAM Trigger: CATTGCCTTCAGGGGGCTGTGACTTCGGACTATGCATCTGGCATGGCCATGGCAGGAGCTGGCATAGTCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR CCA 72 bp | TCATGTCGAAGCCCGAGACTATGCCAGCTCCTGCCATaGCCATGCCAGATGCATAGTCCGAAGTCACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SCRSPRLCQLLP*PCQMHSPKSQP Trigger: GGGCTGTGACTTCGGACTATGCATCTGGCATGGCCATGGCAGGAGCTGGCATAGTCTCGGGCTTCGACATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGAGGTGGAGCTGCTTCAGCTACTaGCAGGGCACAGTGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: GAKEHFLETRLAEDLQRWSCFSY*QGTVSI Trigger: GATGGACACTGTGCCCTGCAAGTAGCTGAAGCAGCT...CCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| 3UTR TCA 72 bp | TGGGATATCAGGTGCCAGGATCCAGTTGCAAACCAGTaGGAGTTCACTGAGGAGCTAGCAGCCCATCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: WDIRCQDPVANQ*EFTEELAAHPR Trigger: CCTGGGATGGGCTGCTAGCTCCTCAGTGAACTCTCACTGGTTTGCAACTGGATCCTGGCACCTGATATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR TCA 72 bp | CAGTTACTCAGCTCAAGACTGGATAGGGTGAAGATCTaGGATGGGCTTCTGCCACGTGAAGCCTCAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QLLSSRLDRVKI*DGLLPREASAA Trigger: GGCTGCTGAGGCTTCACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATCCAGTCTTGAGCTGAGTAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR TCA 72 bp | CTGAGGCAGCAAAGGCCATGGTGTCTGTGCCATGGATaGCAACAAAGCCCTGGTACTGTGCGTAGTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LRQQRPWCLCHG*QQSPGTVRSVF Trigger: AAAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCCTTTGCTGCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGGTGCCAGGATCCAGTaGCAAACCAGTGAGAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: KDLQIVVRKGWEAAEQKTGARIQ*QTSESS Trigger: TGAACTCTCACTGGTTTGCAACTGGATCCTGGCACC...TGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGACAAAGACCTTCAGATaGTCGTGCGGAAAGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LLNKDLQIVVRKGWEAAETKTFR*SCGKAG Trigger: CCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGT...CTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTAGGCTTGCTGAGGACTaGCAGAGGTGGGGCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TLLTFFSTKTFRLSCGKARLAED*QRWGSP Trigger: GGGGGAGCCCCACCTCTGCAAGTCCTCAGCAAGCCT...AGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| 3UTR TCA 72 bp | GACCTTTCCAGTTACTCAGCTCAAGACTGGATAGGGTaGAGATCTGAGATGGGCTTCTGCCACGTGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DLSSYSAQDWIG*RSEMGFCHVKP Trigger: AGGCTTCACGTGGCAGAAGCCCATCTCAGATCTTCACCCTATCCAGTCTTGAGCTGAGTAACTGGAAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| 3UTR CCA 72 bp | CTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTaGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LNKDLQIVVRKG*EAAEQKTAQLR Trigger: CCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGCAGTCTCTGGAGATaGGGGCTTGCCCACCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLLTFFSTKTFRLSCGKAGSLWR*GLAHPV Trigger: GACAGGGTGGGCAAGCCCCAATCTCCAGAGACTGCC...AGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCTCTGGTCCCGACAACTTTATaGACATTCTTCTCAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WEAAEQKTAQLREDKSALVPTTL*TFFSTK Trigger: CTTTGTTGAGAAGAATGTCAATAAAGTTGTCGGGAC...CAGAGCGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTCGGCAGCCAGGCCTCTaGCAGGTACCAACACTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRCVWSPGSLWRLGLAHPRQPGL*QVPTLR Trigger: GCGGAGTGTTGGTACCTGGCAGAGGCCTGGCTGCCG...AGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| 3UTR CAA 72 bp | TCGGCCGCCACCCGAAGCTCCTGTAGTAGGTCTGGCTaGGTGGGCCCATTCCCAGAGCCGAAGGTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAATRSSCSRSG*VGPFPEPKVSM Trigger: CATGGAGACCTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTACTACAGGAGCTTCGGGTGGCGGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTCCTTTCAGTGGGGGCTaGAGGAAGGTCCGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRCVWSPGSLWRLGLAHPPFSGG*RKVRTR Trigger: CCTGGTCCGGACCTTCCTCCAGCCCCCACTGAAAGG...AGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAACCGTTTCTGCTGCAGCAGGATGGCAGGTTTGGGGCCAAGGAGCACTTCTCCAGGTCACCAGCGTaGGCTGCAGCCAGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEPFLLQQDGRFGAKEHFSRSPA*AAARAR Trigger: CCTGGCCCTGGCTGCAGCTCACGCTGGTGACCTGGA...GAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGCTGCAGCAGAAACGGTTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGATTTTCAGCTGGCGCCTCCCAGGAGCAAACTGTCCATGGTGGACACTCTCGGCAGCCAGGCCTCTaGCAGGTACCAACACTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRFSAGASQEQTVHGGHSRQPGL*QVPTLR Trigger: GCGGAGTGTTGGTACCTGGCAGAGGCCTGGCTGCCG...AGAGTGTCCACCATGGACAGTTTGCTCCTGGGAGGCGCCAGCTGAAAATCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCGCCGTCACTCCACAGTaGGTGGATAGGTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGALCMESRQSLEIGACAVTPQ*VDRYLG Trigger: GCCCAGGTACCTATCCACGCACTGTGGAGTGACGGC...GCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCTCTGGTCACCAGCGTGAGCTaGAGCCAGGGCCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEAAEQKTAQLREDKSALVTSVS*SQGQAG Trigger: CCCGGCCTGGCCCTGGCTGCAGCTCACGCTGGTGAC...CAGAGCGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGGTCACCAGCGTGAGCTaGAGCCAGGGCCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPVTSVS*SQGQAG Trigger: CCCGGCCTGGCCCTGGCTGCAGCTCACGCTGGTGAC...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCCCCTTGATGCCAGCCTaGACAGCTCTGTCCCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGAVYGVQAVSGDWGLPPLMPA*TALSQR Trigger: ACGTTGGGACAGAGCTGTGCAGGCTGGCATCAAGGG...GGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACACGTCCTCCAGCTCCTaGGGAGACAGGCGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGRFGAKEHFLETRLAEDTSSSS*GDRRAP Trigger: TGGGGCCCGCCTGTCTCCCCAGGAGCTGGAGGACGT...GTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGATTTTCAGCTGGCGCCTCCCAGGAGCAAACTGTCCATGGTGGACACTCTTCCTGGTGGCATGCTaGCCAGAGGTGTGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIFSWRLPGANCPWWTLFLVAC*PEVWGS Trigger: GCTGCCCCACACCTCTGGCCAGCATGCCACCAGGAA...GAGTGTCCACCATGGACAGTTTGCTCCTGGGAGGCGCCAGCTGAAAATCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
||
| CDS-3UTR TCA 90 bp | CCACCACATCTGCATTTCCAGCTGCTTCAGCTACTTGCAGGGCACAGTGTCCATTCCAGGTCACCAGCGTaGGCTGCAGCCAGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHLHFQLLQLLAGHSVHSRSPA*AAARAR Trigger: CCTGGCCCTGGCTGCAGCTCACGCTGGTGACCTGGA...ATGGACACTGTGCCCTGCAAGTAGCTGAAGCAGCTGGAAATGCAGATGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCCCAGCCTGCCACCATaGCCGCAGGCCTTCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPPSLPP*PQAFAV Trigger: GACAGCGAAGGCCTGCGGGCATGGTGGCAGGCTGGG...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCACTGGAGTCGAAGAGTaGCTGGCACTCCAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGALCMESRQSLEIGACTGVEE*LALQHR Trigger: ACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGT...GCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGAGGTGGGACCACGCCTTTCAGTaGGGGCTGGAGGAAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GAKEHFLETRLAEDLQRWDHAFQ*GLEEGP Trigger: CGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTC...CCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCGCACATAGGACAGTTTaGCCAGGGCAGCCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGGAVYGVQAVSGDWGLPAHRTV*PGQPLM Trigger: CATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGC...GGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGCTCTGACGTCCTCCAGCTCCTaGGGAGACAGGCGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WEAAEQKTAQLREDKSALTSSSS*GDRRAP Trigger: TGGGGCCCGCCTGTCTCCCCAGGAGCTGGAGGACGT...CAGAGCGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGATTTTCAGCTGGCGCCTCCCAGGAGCAAACTGTCCATGGTGGACACTCTTGCTGGCCAGAGGTGTaGGGCAGCACCAGCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRFSAGASQEQTVHGGHSCWPEV*GSTSVS Trigger: GGATACGCTGGTGCTGCCCCACACCTCTGGCCAGCA...AGAGTGTCCACCATGGACAGTTTGCTCCTGGGAGGCGCCAGCTGAAAATCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGAGGTGGAGCCGAAGGTCTCCATaGCCACGCCTTTCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAKEHFLETRLAEDLQRWSRRSP*PRLSVG Trigger: CCCCACTGAAAGGCGTGGTCATGGAGACCTTCGGCT...CCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR TCA 90 bp | CTTCAGGGGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCTCTCAGCAGCCCAATaGCACTCTGATGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQGALCMESRQSLEIGACLSAAQ*HSDASS Trigger: GGAACTGGCATCAGAGTGTCATTGGGCTGCTGAGAG...GCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCCCCTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGGGCATGGCCCCTCCGTaGAGCCACATGCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPGMAPP*SHMQWG Trigger: ACCCCACTGCATGTGGCTGCACGGAGGGGCCATGCC...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR GCA 90 bp | TCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGACCCAGCCTGCCACCATaGCCGCAGGCCTTCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: STKTFRLSCGKAGKQLSRPSLPP*PQAFAV Trigger: GACAGCGAAGGCCTGCGGGCATGGTGGCAGGCTGGG...TCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR GCA 90 bp | TCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGGTCAGCCCCAGCCTaGCACCATGCCCGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: STKTFRLSCGKAGKQLSRRSAPA*HHARRP Trigger: AGGCCTGCGGGCATGGTGGCAGGCTGGGGCTGACCT...TCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR GCA 90 bp | TGGCCAGGGCAGCCTCTGATGTCATGTCGAAGCCCGAGACTATGCCAGCTCCTGGCCGTCACTCCACAGTaGGTGGATAGGTACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WPGQPLMSCRSPRLCQLLAVTPQ*VDRYSV Trigger: CACTGAGTACCTATCCACGCACTGTGGAGTGACGGC...CAGGAGCTGGCATAGTCTCGGGCTTCGACATGACATCAGAGGCTGCCCTGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGATTTTCAGCTGGCGCCTCCCAGGAGCAAACTGTCCATGGTGGACACTCTCGCTCCGCATGCCGATaGTGCCGCCAGTGTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRFSAGASQEQTVHGGHSRSACR*CRQCKW Trigger: CCATTTACACTGGCGGCACCATCGGCATGCGGAGCG...AGAGTGTCCACCATGGACAGTTTGCTCCTGGGAGGCGCCAGCTGAAAATCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGTCCTCTGGTCAGGGCTaGCCGGGGGCAGCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FFSTKTFRLSCGKAGKQLSSGQG*PGAAPA Trigger: CGCTGGTGCTGCCCCCGGCCAGCCCTGACCAGAGGA...CAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CCA 90 bp | GGCCCAGCACATAGGACAGTTTGGCCAGGGCAGCCTCTGATGTCATGTCGAAGCACTGGAGTCGAAGAGTaGCTGGCACTCCAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPAHRTVWPGQPLMSCRSTGVEE*LALQHR Trigger: ACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGT...GCTTCGACATGACATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
||
| CDS-3UTR CCA 90 bp | ACCCGAAGCTCCTGTAGTAGGTCTGGCTTGGTGGGCCCATTCCCAGAGCCGAAGTCAGGGATGACGTATTaGCCAGCCATGAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSSCSRSGLVGPFPEPKSGMTY*PAMSRA Trigger: GGCTCTGCTCATGGCTGGCCAATACGTCATCCCTGA...CTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTACTACAGGAGCTTCGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
||
| CDS-3UTR TCA 90 bp | GGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTGCAGATTTTCCAGCATaGAAGAGAGCACTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRCVWSPGSLWRLGLAHPADFPA*KRALRQ Trigger: CTGCCTCAGTGCTCTCTTTCATGCTGGAAAATCTGC...AGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTTCAAAGAAGGAGAGGGTGTGAGCCCCAAGGACTCTAGCTCCCCAGATCACTTCCTGGTGGCATaGTGGCCAGAGGTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSFKEGEGVSPKDSSSPDHFLVA*WPEVWG Trigger: GCCCCACACCTCTGGCCAGCATGCCACCAGGAAGTG...ATCTGGGGAGCTAGAGTCCTTGGGGCTCACACCCTCTCCTTCTTTGAAAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGCTGTGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTAAAGCCCTGGTACTGTaGGTAGTGTCTCTCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCVWSPGSLWRLGLAHPKALVL*VVSLYG Trigger: ACCATAGAGAGACACTACGCACAGTACCAGGGCTTT...AGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACACAGCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGGAGTCCAGGCAGTCTCTGGAGATTGGGGCTTGCCCACCCTGTCTCAAAGACTATGCCAGCTCCTaGCATGGCCATGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CMESRQSLEIGACPPCLKDYASS*HGHARC Trigger: GCATCTGGCATGGCCATGGCAGGAGCTGGCATAGTC...TTTGAGACAGGGTGGGCAAGCCCCAATCTCCAGAGACTGCCTGGACTCCATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR GCA 90 bp | GGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCAGCATGGTAACCACTaGGGCATGGCCCCTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGKQLSRRQLNLGRISQHGNH*GMAPPC Trigger: GCACGGAGGGGCCATGCCGCAGTGGTTACCATGCTG...ACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR GCA 90 bp | GCCACCACATCTGCATTTCCAGCTGCTTCAGCTACTTGCAGGGCACAGTGTCCACCCTTGATGCCAGCCTaGACAGCTCTGTCCCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: ATTSAFPAASATCRAQCPPLMPA*TALSQR Trigger: ACGTTGGGACAGAGCTGTGCAGGCTGGCATCAAGGG...TGGACACTGTGCCCTGCAAGTAGCTGAAGCAGCTGGAAATGCAGATGTGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCCTCCAGCTGCCTCTAAAATTGGCTCTGGGATATCAGGTGCCAGGATCCGCTCCGCATGCCGATaGTGCCGCCAGTGTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPAASKIGSGISGARIRSACR*CRQCKW Trigger: CCATTTACACTGGCGGCACCATCGGCATGCGGAGCG...GATCCTGGCACCTGATATCCCAGAGCCAATTTTAGAGGCAGCTGGAGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGAGGTGGTCAGGGATGACGTATTaGCCAGCCATGAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAKEHFLETRLAEDLQRWSGMTY*PAMSRA Trigger: GGCTCTGCTCATGGCTGGCCAATACGTCATCCCTGA...CCACCTCTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAACCGTTTCTGCTGCAGCAGGATGGCAGGTTTGGGGCCAAGGAGCACTTCGGCTCCATGCTACTGTaGACCACCAGATGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEPFLLQQDGRFGAKEHFGSMLL*TTRWLF Trigger: GAAGAGCCATCTGGTGGTCCACAGTAGCATGGAGCC...GAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGCTGCAGCAGAAACGGTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR TCA 90 bp | TGTCATTCAGGCTCAGCCCTGGCTGGCCCAGCACATAGGACAGTTTGGCCAGGGTGGATAGGTACTCAGTaGTGGTCATGTCACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHSGSALAGPAHRTVWPGWIGTQ*WSCHWS Trigger: ACTCCAGTGACATGACCATCACTGAGTACCTATCCA...CCCTGGCCAAACTGTCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAATGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGGAAGCCAAGCTACCCTaGAGCCCAGCATGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPEAKLP*SPACHP Trigger: AGGATGGCATGCTGGGCTGCAGGGTAGCTTGGCTTC...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGGTGTCCATCATAGTCTaGCTGTCCCAGGTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPVSIIV*LSQVSP Trigger: GGGGCTGACCTGGGACAGCCAGACTATGATGGACAC...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCAAGAAAGGCTCCGGATGACACGTCTCCCATATCCTCTTCCTCCAGCTTCTGAACCCACTCAGTaGTGGTCATGTCACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPQERLRMTRLPYPLPPASEPTQ*WSCHWS Trigger: ACTCCAGTGACATGACCATCACTGAGTGGGTTCAGA...AGCTGGAGGAAGAGGATATGGGAGACGTGTCATCCGGAGCCTTTCTTGGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR TCA 90 bp | AGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGGAAGTCACAGCCCCCTaGAGGCAATGGGTACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFGAKEHFLETRLAEDLQEVTAP*RQWVQL Trigger: CAACTGTACCCATTGCCTTCAGGGGGCTGTGACTTC...CTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR GCA 90 bp | AGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGCCACGTCAGGCTCCATaGTACTGTGGACCACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFGAKEHFLETRLAEDLQPRQAP*YCGPPD Trigger: ATCTGGTGGTCCACAGTAGCATGGAGCCTGACGTGG...CTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGAAGCCAAGCTACCCTaGAGCCCAGCATGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDLQIVVRKGWEAAEQKTEAKLP*SPACHP Trigger: AGGATGGCATGCTGGGCTGCAGGGTAGCTTGGCTTC...TGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGAGTTCCACAAAGGCCTaGAGGGTGTCCAGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPSSTKA*RVSRSP Trigger: TGGTGACCTGGACACCCTGCAGGCCTTTGTGGAACT...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGCAGCAGGATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGATCTGCATTTCCAGCTaGTTCAGCTACTTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQQDGRFGAKEHFLETRICISS*FSYLQG Trigger: GCCCTGCAAGTAGCTGAAGCAGCTGGAAATGCAGAT...CCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGCTGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CCA 90 bp | CTGCTGCAGCAGGATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGATGGTGTCTGTGCCATaGATGACAACAAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQDGRFGAKEHFLETRMVSVP*MTTKPW Trigger: CCAGGGCTTTGTTGTCATCCATGGCACAGACACCAT...CCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATCCTGCTGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CCA 90 bp | AAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTCCGGCACATAGGACAGTTTaGCCAGGGCAGCCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KAGKQLSRRQLNLGRISPAHRTV*PGQPLM Trigger: CATCAGAGGCTGCCCTGGCCAAACTGTCCTATGTGC...CGGACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR CCA 90 bp | AAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAATTCAGGCTCAGCCCTaGCTGGCCCAGCACATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDLQIVVRKGWEAAEQKTIQAQP*LAQHIG Trigger: TCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAAT...TGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR CCA 90 bp | CCATATCCTCTTCCTCCAGCTGCCTCTAAAATTGGCTCTGGGATATCAGGTGCCATTCAGGCTCAGCCCTaGCTGGCCCAGCACATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYPLPPAASKIGSGISGAIQAQP*LAQHIG Trigger: TCCTATGTGCTGGGCCAGCCAGGGCTGAGCCTGAAT...GGCACCTGATATCCCAGAGCCAATTTTAGAGGCAGCTGGAGGAAGAGGATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGAAGTTCCACAAAGGCCTaGAGGGTGTCCAGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTFRLSCGKAGKQLSRRSSTKA*RVSRSP Trigger: TGGTGACCTGGACACCCTGCAGGCCTTTGTGGAACT...TCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR GCA 90 bp | CTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGGGCCACCACATCTaGATTTCCAGCTGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNKDLQIVVRKGWEAAEQGHHI*ISSCFS Trigger: GCTGAAGCAGCTGGAAATGCAGATGTGGTGGCCCTG...CTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CCA 90 bp | GGAAAGGCTGGGAAGCAGCTGAGCAGAAGACAGCTCAACTTAGGGAGGATAAGTTGCCAGCTCCTGCCATaGCCATGCCAGATGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKAGKQLSRRQLNLGRISCQLLP*PCQMHS Trigger: ACTATGCATCTGGCATGGCCATGGCAGGAGCTGGCA...ACTTATCCTCCCTAAGTTGAGCTGTCTTCTGCTCAGCTGCTTCCCAGCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR TCA 90 bp | TTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGTTGCCCCGGAAGAGCTaGTTCTGGAAGAACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFSTKTFRLSCGKAGKQLLPRKS*FWKNRQ Trigger: CTGCCTGTTCTTCCAGAATCAGCTCTTCCGGGGCAA...CAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CCA 90 bp | AGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACTTGCAGGAAGAACATCCTTCATaGTATCAGCCTCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFGAKEHFLETRLAEDLQEEHPS*YQPPGC Trigger: GCAGCCAGGAGGCTGATACCATGAAGGATGTTCTTC...CTGCAAGTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGAAGATCATCGTGGAACATGTaGAGTGTCTTCAGGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTFRLSCGKAGKQLSRRSSWNM*SVFRTA Trigger: TGCCGTCCTGAAGACACTTCACATGTTCCACGATGA...TCTTCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR TCA 90 bp | ATGAAAGAGAGCACTGAGGCAGCAAAGGCCATGGTGTCTGTGCCATGGATGACATCATCGTGGAACATGTaGAGTGTCTTCAGGACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKESTEAAKAMVSVPWMTSSWNM*SVFRTA Trigger: TGCCGTCCTGAAGACACTTCACATGTTCCACGATGA...TGTCATCCATGGCACAGACACCATGGCCTTTGCTGCCTCAGTGCTCTCTTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220719.2 |
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| CDS-3UTR CCA 90 bp | TTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGGTAGGTCTGGCTTGGTaGGCCCATTCCCAGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTFFSTKTFRLSCGKAGVGLAW*AHSQSR Trigger: TCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTAC...CCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR GCA 90 bp | TTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGCTCCTGCCATGGCCATaGCAGATGCATAGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLTFFSTKTFRLSCGKAGLLPWP*QMHSPK Trigger: CTTCGGACTATGCATCTGGCATGGCCATGGCAGGAG...CCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| 3UTR CAA 72 bp | ACTTTATTGACATTCTTCTCAACAAAGACCTTCAGATaGTCGTGCGGAAAGGCTGGGAAGCAGCTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLTFFSTKTFR*SCGKAGKQLSR Trigger: TCTGCTCAGCTGCTTCCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS-3UTR CCA 90 bp | AACTTTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCGAAGAACATCCTTCATaGTATCAGCCTCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFIDILLNKDLQIVVRKGEEHPS*YQPPGC Trigger: GCAGCCAGGAGGCTGATACCATGAAGGATGTTCTTC...GCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS GCA 90 bp | CAGCCAGGCCTCTGCCAGGTACCAACACTCCGCCTTCGCTCCGCATaGCGATGGTGCCGCCAGTGTAAATGGCCAGCAGCCGCCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPGLCQVPTLRLRSA*RWCRQCKWPAAAAL Trigger: CAGAGCGGCGGCTGCTGGCCATTTACACTGGCGGCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTACCTGGCAGAGGCCTGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS CCA 90 bp | GGCCTCTGCCAGGTACCAACACTCCGCCTTCGCTCCGCATGCCGATaGTGCCGCCAGTGTAAATGGCCAGCAGCCGCCGCTCTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLCQVPTLRLRSACR*CRQCKWPAAAALVP Trigger: TGGGACCAGAGCGGCGGCTGCTGGCCATTTACACTGGCGGCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTACCTGGCAGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000223412.2 |
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| CDS TCA 90 bp | GTAGGTCTGGCTTGGTGGGCCCATTCCCAGAGCCGAAGGTCTCCATaGCCACGCCTTTCAGTGGGGGCTGGAGGAAGGTCCGGACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLAWWAHSQSRRSP*PRLSVGAGGRSGPG Trigger: CCCTGGTCCGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTCATGGAGACCTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 90 bp | GGAGACAGGCGGGCCCCAGCAGCTCTCAGCAGCCCAATGACACTCTaGTGCCAGTTCCACAAAGGCCTGCAGGGTGTCCAGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDRRAPAALSSPMTL*CQFHKGLQGVQVTS Trigger: GCTGGTGACCTGGACACCCTGCAGGCCTTTGTGGAACTGGCATCAGAGTGTCATTGGGCTGCTGAGAGCTGCTGGGGCCCGCCTGTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| CDS-3UTR CAA 90 bp | ACCCGAAGCTCCTGTAGTAGGTCTGGCTTGGTGGGCCCATTCCCAGAGCCGAAGCTCCGAGCGTCCACCTaGGTTGTCCGATTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRSSCSRSGLVGPFPEPKLRAST*VVRLPR Trigger: CCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAG...CTTCGGCTCTGGGAATGGGCCCACCAAGCCAGACCTACTACAGGAGCTTCGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| CDS TCA 90 bp | TGTCACTGGAGTCGAAGAGTGGCTGGCACTCCAGCACCGTGTAGATaGTCCTCTGGTCAGGGCTGGCCGGGGGCAGCACCAGCGTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHWSRRVAGTPAPCR*SSGQGWPGAAPAYP Trigger: AGGATACGCTGGTGCTGCCCCCGGCCAGCCCTGACCAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGTGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000223412.2 |
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| CDS GCA 90 bp | CATGAGCAGAGCCCCCAGCAGGTTCTCACGGCCGTCACTCCACAGTaGGTGGATAGGTACCTGGGCACCCGTGAGGACGACTGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HEQSPQQVLTAVTPQ*VDRYLGTREDDWFL Trigger: CAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGGGGCTCTGCTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 90 bp | CGGGAATTCCAGGGTAGAGGCGCAGTAGGCCCACGTCAGGCTCCATaGTACTGTGGACCACCAGATGGCTCTTCCCGCAGGCCTTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: REFQGRGAVGPRQAP*YCGPPDGSSRRPSV Trigger: TACGGAAGGCCTGCGGGAAGAGCCATCTGGTGGTCCACAGTAGCATGGAGCCTGACGTGGGCCTACTGCGCCTCTACCCTGGAATTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 90 bp | AGCAGAGCCCCCAGCAGGTTCTCACGGCCGTCACTCCACAGTGCGTaGATAGGTACCTGGGCACCCGTGAGGACGACTGGTTTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRAPSRFSRPSLHSA*IGTWAPVRTTGFCR Trigger: TCTGCAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGGGGCTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 90 bp | CATCGTGGAACATGTGAAGTGTCTTCAGGACGGCAGCCAGGCCTCTaGCAGGTACCAACACTCCGCCTTCGCTCCGCATGCCGATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRGTCEVSSGRQPGL*QVPTLRLRSACRWC Trigger: GCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTACCTGGCAGAGGCCTGGCTGCCGTCCTGAAGACACTTCACATGTTCCACGATG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS CCA 90 bp | CGCAGTAGGCCCACGTCAGGCTCCATGCTACTGTGGACCACCAGATaGCTCTTCCCGCAGGCCTTCCGTACCAGCTCACGGTTGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSRPTSGSMLLWTTR*LFPQAFRTSSRLIV Trigger: CACAATCAACCGTGAGCTGGTACGGAAGGCCTGCGGGAAGAGCCATCTGGTGGTCCACAGTAGCATGGAGCCTGACGTGGGCCTACTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CAA 90 bp | GGTCCCCAAGAAAGGCTCCGGATGACACGTCTCCCATATCCTCTTCCTCCAGCTCTCCGAGCGTCCACCTaGGTTGTCCGATTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPQERLRMTRLPYPLPPALRAST*VVRLPR Trigger: CCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAG...AGCTGGAGGAAGAGGATATGGGAGACGTGTCATCCGGAGCCTTTCTTGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 90 bp | TCGGGCAGGCTGTGGGCCTGTGCATACTCTTCATCGTGGAACATGTaGAGTGTCTTCAGGACGGCAGCCAGGCCTCTGCCAGGTACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRLWACAYSSSWNM*SVFRTAARPLPGTN Trigger: GTTGGTACCTGGCAGAGGCCTGGCTGCCGTCCTGAAGACACTTCACATGTTCCACGATGAAGAGTATGCACAGGCCCACAGCCTGCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS GCA 90 bp | AGCAGAAGGCGGCAAACCTCCGAGCGTCCACCTTGGTTGTCCGATTaGCCCGGAAGAGCTGATTCTGGAAGAACAGGCAGACCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRRQTSERPPWLSD*PGRADSGRTGRPQG Trigger: TCCCTGAGGTCTGCCTGTTCTTCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAGGTTTGCCGCCTTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS GCA 90 bp | CATGAGCAGAGCCCCCAGCAGGTTCTCACGGCCGTCACTCCACAGTaGGTGGATAGGTACCTCTATGGTTTGGGCAATCTGAACCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: HEQSPQQVLTAVTPQ*VDRYLYGLGNLNPL Trigger: GAGTGGGTTCAGATTGCCCAAACCATAGAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGGGGCTCTGCTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223412.2 |
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| CDS CCA 90 bp | AGCAGGTTCTCACGGCCGTCACTCCACAGTGCGTGGATAGGTACCTaGGCACCCGTGAGGACGACTGGTTTCTGCAGATTTTCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRFSRPSLHSAWIGT*APVRTTGFCRFSSM Trigger: CATGCTGGAAAATCTGCAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CAA 90 bp | GGTCCCCAAGAAAGGCTCCGGATGACACGTCTCCCATATCCTCTTCCTCCAGCTCTCAGGGATGACGTATaGGCCAGCCATGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQERLRMTRLPYPLPPALRDDV*ASHEQS Trigger: GCTCTGCTCATGGCTGGCCAATACGTCATCCCTGAG...AGCTGGAGGAAGAGGATATGGGAGACGTGTCATCCGGAGCCTTTCTTGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CAA 90 bp | CCTGCAGCAAGACATCTGTTGCAGGCAGCGTCATCTCCCCACGAAGATCCTTGGCTCAGGGATGACGTATaGGCCAGCCATGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAARHLLQAASSPHEDPWLRDDV*ASHEQS Trigger: GCTCTGCTCATGGCTGGCCAATACGTCATCCCTGAG...CCAAGGATCTTCGTGGGGAGATGACGCTGCCTGCAACAGATGTCTTGCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| CDS TCA 90 bp | AACCTCCGAGCGTCCACCTTGGTTGTCCGATTGCCCCGGAAGAGCTaGTTCTGGAAGAACAGGCAGACCTCAGGGATGACGTATTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLRASTLVVRLPRKS*FWKNRQTSGMTYWP Trigger: TGGCCAATACGTCATCCCTGAGGTCTGCCTGTTCTTCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS GCA 90 bp | AGTGCGTGGATAGGTACCTGGGCACCCGTGAGGACGACTGGTTTCTaGAGATTTTCCAGCATGAAAGAGAGCACTGAGGCAGCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAWIGTWAPVRTTGF*RFSSMKESTEAAKA Trigger: GGCCTTTGCTGCCTCAGTGCTCTCTTTCATGCTGGAAAATCTGCAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 90 bp | TTCATACTGAGAAGCCAAGCTACCCTGCAGCCCAGCATGCCATCCTaGAGCAAGACATCTGTTGCAGGCAGCGTCATCTCCCCACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FILRSQATLQPSMPS*SKTSVAGSVISPRR Trigger: TCTTCGTGGGGAGATGACGCTGCCTGCAACAGATGTCTTGCTGCAGGATGGCATGCTGGGCTGCAGGGTAGCTTGGCTTCTCAGTATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
||
| CDS TCA 90 bp | GAAGAACATCCTTCATGGTATCAGCCTCCTGGCTGCCATTCATACTaGGAAGCCAAGCTACCCTGCAGCCCAGCATGCCATCCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EEHPSWYQPPGCHSY*EAKLPCSPACHPAA Trigger: TGCTGCAGGATGGCATGCTGGGCTGCAGGGTAGCTTGGCTTCTCAGTATGAATGGCAGCCAGGAGGCTGATACCATGAAGGATGTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS CCA 90 bp | AATCTGAACCCACTCAGTGATGGTCATGTCACTGGAGTCGAAGAGTaGCTGGCACTCCAGCACCGTGTAGATGATCCTCTGGTCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLNPLSDGHVTGVEE*LALQHRVDDPLVRA Trigger: AGCCCTGACCAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000223412.2 |
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| CDS TCA 90 bp | GTGCGTAGTGTCTCTCTATGGTTTGGGCAATCTGAACCCACTCAGTaGTGGTCATGTCACTGGAGTCGAAGAGTGGCTGGCACTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRSVSLWFGQSEPTQ*WSCHWSRRVAGTPA Trigger: TGCTGGAGTGCCAGCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGAGACACTACGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 90 bp | TCACTCCACAGTGCGTGGATAGGTACCTCTATGGTTTGGGCAATCTaGACCCACTCAGTGATGGTCATGTCACTGGAGTCGAAGAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SLHSAWIGTSMVWAI*THSVMVMSLESKSG Trigger: GCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGGTACCTATCCACGCACTGTGGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223412.2 |
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| CDS GCA 90 bp | GGCCATGGTGTCTGTGCCATGGATGACAACAAAGCCCTGGTACTGTaGGTAGTGTCTCTCTATGGTTTGGGCAATCTGAACCCACTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GHGVCAMDDNKALVL*VVSLYGLGNLNPLS Trigger: ACTGAGTGGGTTCAGATTGCCCAAACCATAGAGAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CAA 90 bp | GATGGCAGGTTTGGGGCCAAGGAGCACTTCCTAGAAACAAGGCTTGCTGAGGACAGGCAATGGGTACAGTaGACAATGATCAGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: DGRFGAKEHFLETRLAEDRQWVQ*TMIRPC Trigger: ACAAGGCCTGATCATTGTCAACTGTACCCATTGCCT...GTCCTCAGCAAGCCTTGTTTCTAGGAAGTGCTCCTTGGCCCCAAACCTGCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 90 bp | AAGAGAGCACTGAGGCAGCAAAGGCCATGGTGTCTGTGCCATGGATaGCAACAAAGCCCTGGTACTGTGCGTAGTGTCTCTCTATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: KRALRQQRPWCLCHG*QQSPGTVRSVSLWF Trigger: AAACCATAGAGAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCCTTTGCTGCCTCAGTGCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS-3UTR CAA 90 bp | TTATTGACATTCTTCTCAACAAAGACCTTCAGATTGTCGTGCGGAAAGGCTGGGAGCTGCTTCAGCTACTaGCAGGGCACAGTGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LLTFFSTKTFRLSCGKAGSCFSY*QGTVSI Trigger: GATGGACACTGTGCCCTGCAAGTAGCTGAAGCAGCT...CCCAGCCTTTCCGCACGACAATCTGAAGGTCTTTGTTGAGAAGAATGTCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 72 bp | CCCGCAGGCCTTCGCTGTCTCCCCTTGATGCCAGCCTaGACAGCTCTGTCCCAACGTCCTCCAGCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PAGLRCLPLMPA*TALSQRPPAPG Trigger: CCCAGGAGCTGGAGGACGTTGGGACAGAGCTGTGCAGGCTGGCATCAAGGGGAGACAGCGAAGGCCTGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS GCA 72 bp | GTACCAACACTCCGCCTTCGCTCCGCATGCCGATGGTaGCGCCAGTGTAAATGGCCAGCAGCCGCCGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VPTLRLRSACRW*RQCKWPAAAAL Trigger: CAGAGCGGCGGCTGCTGGCCATTTACACTGGCGGCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS GCA 72 bp | AGCCCCCAGCAGGTTCTCACGGCCGTCACTCCACAGTaGGTGGATAGGTACCTGGGCACCCGTGAGGACGAC | + |
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Preference number: 6 (lower is better) Translates to: SPQQVLTAVTPQ*VDRYLGTREDD Trigger: GTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGGGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 72 bp | CAGGTACCAACACTCCGCCTTCGCTCCGCATGCCGATaGTGCCGCCAGTGTAAATGGCCAGCAGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: QVPTLRLRSACR*CRQCKWPAAAA Trigger: AGCGGCGGCTGCTGGCCATTTACACTGGCGGCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS TCA 72 bp | AGTCGAAGAGTGGCTGGCACTCCAGCACCGTGTAGATaGTCCTCTGGTCAGGGCTGGCCGGGGGCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SRRVAGTPAPCR*SSGQGWPGAAP Trigger: TGGTGCTGCCCCCGGCCAGCCCTGACCAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000223412.2 |
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| CDS TCA 72 bp | AGTCGAAGAGTGGCTGGCACTCCAGCACCGTGTAGATaGTCCTCTGGTCAGGGCTGGCCGGGCTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRRVAGTPAPCR*SSGQGWPGCRR Trigger: CCTCCTGCAGCCCGGCCAGCCCTGACCAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| CDS GCA 72 bp | CTCTGCCAGGTACCAACACTCCGCCTTCGCTCCGCATaGCGATGGTGCCGCCAGTGTAAATGGCCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LCQVPTLRLRSA*RWCRQCKWPAA Trigger: GGCTGCTGGCCATTTACACTGGCGGCACCATCGGCATGCGGAGCGAAGGCGGAGTGTTGGTACCTGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS GCA 72 bp | CAGGGTAGAGGCGCAGTAGGCCCACGTCAGGCTCCATaGTACTGTGGACCACCAGATGGCTCTTCCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGRGAVGPRQAP*YCGPPDGSSRR Trigger: CCTGCGGGAAGAGCCATCTGGTGGTCCACAGTAGCATGGAGCCTGACGTGGGCCTACTGCGCCTCTACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 72 bp | CCCAGCAGGTTCTCACGGCCGTCACTCCACAGTGCGTaGATAGGTACCTGGGCACCCGTGAGGACGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: PSRFSRPSLHSA*IGTWAPVRTTG Trigger: ACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 72 bp | AGGCGCAGTAGGCCCACGTCAGGCTCCATGCTACTGTaGACCACCAGATGGCTCTTCCCGCAGGCCTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: RRSRPTSGSMLL*TTRWLFPQAFR Trigger: ACGGAAGGCCTGCGGGAAGAGCCATCTGGTGGTCCACAGTAGCATGGAGCCTGACGTGGGCCTACTGCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 72 bp | CCGAAGGTCTCCATGACCACGCCTTTCAGTGGGGGCTaGAGGAAGGTCCGGACCAGGGAGGCGGGAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: PKVSMTTPFSGG*RKVRTREAGIP Trigger: TGGAATTCCCGCCTCCCTGGTCCGGACCTTCCTCCAGCCCCCACTGAAAGGCGTGGTCATGGAGACCTTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 72 bp | CGGGCCCCAGCAGCTCTCAGCAGCCCAATGACACTCTaGTGCCAGTTCCACAAAGGCCTGCAGGGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RAPAALSSPMTL*CQFHKGLQGVQ Trigger: CTGGACACCCTGCAGGCCTTTGTGGAACTGGCATCAGAGTGTCATTGGGCTGCTGAGAGCTGCTGGGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222970.2 |
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| CDS GCA 72 bp | CCATCCTCATTACGGGCATCCACATCCGCACCCCTCTaGAGCAGCATGGTAACCACTGCGGCATGGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSSLRASTSAPL*SSMVTTAAWPL Trigger: GAGGGGCCATGCCGCAGTGGTTACCATGCTGCTGCAGAGGGGTGCGGATGTGGATGCCCGTAATGAGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 72 bp | ACATGTGAAGTGTCTTCAGGACGGCAGCCAGGCCTCTaGCAGGTACCAACACTCCGCCTTCGCTCCGCATGC | + |
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Preference number: 6 (lower is better) Translates to: TCEVSSGRQPGL*QVPTLRLRSAC Trigger: GCATGCGGAGCGAAGGCGGAGTGTTGGTACCTGGCAGAGGCCTGGCTGCCGTCCTGAAGACACTTCACATGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000220719.2 ENSMUST00000223412.2 |
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| CDS CCA 72 bp | GGGAGCAGAAGGCGGCAAACCTCCGAGCGTCCACCTTaGTTGTCCGATTGCCCCGGAAGAGCTGATTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSRRRQTSERPP*LSDCPGRADSG Trigger: TCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAGGTTTGCCGCCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS TCA 72 bp | GCGTCCACCTTGGTTGTCCGATTGCCCCGGAAGAGCTaGTTCTGGAAGAACAGGCAGACCTCAGGGATGACG | + |
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Preference number: 6 (lower is better) Translates to: ASTLVVRLPRKS*FWKNRQTSGMT Trigger: CGTCATCCCTGAGGTCTGCCTGTTCTTCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS GCA 72 bp | CGGCAAACCTCCGAGCGTCCACCTTGGTTGTCCGATTaGCCCGGAAGAGCTGATTCTGGAAGAACAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RQTSERPPWLSD*PGRADSGRTGR Trigger: TCTGCCTGTTCTTCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAGGTTTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS GCA 72 bp | AGCCCCCAGCAGGTTCTCACGGCCGTCACTCCACAGTaGGTGGATAGGTACCTCTATGGTTTGGGCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: SPQQVLTAVTPQ*VDRYLYGLGNL Trigger: CAGATTGCCCAAACCATAGAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGAGAACCTGCTGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223412.2 |
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| CDS CCA 72 bp | TCACGGCCGTCACTCCACAGTGCGTGGATAGGTACCTaGGCACCCGTGAGGACGACTGGTTTCTGCAGATTT | + |
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Preference number: 6 (lower is better) Translates to: SRPSLHSAWIGT*APVRTTGFCRF Trigger: AAATCTGCAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTATCCACGCACTGTGGAGTGACGGCCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CAA 72 bp | AGCAGAAGGCGGCAAACCTCCGAGCGTCCACCTTGGTaGTCCGATTGCCCCGGAAGAGCTGATTCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRRRQTSERPPW*SDCPGRADSGR Trigger: TCTTCCAGAATCAGCTCTTCCGGGGCAATCGGACAACCAAGGTGGACGCTCGGAGGTTTGCCGCCTTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079400.6 ENSMUST00000223184.2 ENSMUST00000223412.2 |
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| CDS CAA 72 bp | TGCAGCCCAGCATGCCATCCTGCAGCAAGACATCTGTaGCAGGCAGCGTCATCTCCCCACGAAGATCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSPACHPAARHL*QAASSPHEDPW Trigger: CCAAGGATCTTCGTGGGGAGATGACGCTGCCTGCAACAGATGTCTTGCTGCAGGATGGCATGCTGGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000222970.2 |
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| CDS CCA 72 bp | CCACTCAGTGATGGTCATGTCACTGGAGTCGAAGAGTaGCTGGCACTCCAGCACCGTGTAGATGATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLSDGHVTGVEE*LALQHRVDDPL Trigger: CAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079400.6 ENSMUST00000223412.2 |
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| CDS TCA 72 bp | CTGAGGCAGCAAAGGCCATGGTGTCTGTGCCATGGATaGCAACAAAGCCCTGGTACTGTGCGTAGTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRQQRPWCLCHG*QQSPGTVRSVS Trigger: AGAGACACTACGCACAGTACCAGGGCTTTGTTGTCATCCATGGCACAGACACCATGGCCTTTGCTGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CCA 72 bp | GTACTCAGTGATGGTCATGTCACTGGAGTCGAAGAGTaGCTGGCACTCCAGCACCGTGTAGATGATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLSDGHVTGVEE*LALQHRVDDPL Trigger: CAGAGGATCATCTACACGGTGCTGGAGTGCCAGCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223184.2 |
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| CDS TCA 72 bp | GTCTCTCTATGGTTTGGGCAATCTGAACCCACTCAGTaGTGGTCATGTCACTGGAGTCGAAGAGTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSLWFGQSEPTQ*WSCHWSRRVAG Trigger: GCCAGCCACTCTTCGACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS GCA 72 bp | ATAGGTACCTGGGCACCCGTGAGGACGACTGGTTTCTaGAGATTTTCCAGCATGAAAGAGAGCACTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IGTWAPVRTTGF*RFSSMKESTEA Trigger: TGCCTCAGTGCTCTCTTTCATGCTGGAAAATCTGCAGAAACCAGTCGTCCTCACGGGTGCCCAGGTACCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS TCA 72 bp | AGTGCGTGGATAGGTACCTCTATGGTTTGGGCAATCTaGACCCACTCAGTGATGGTCATGTCACTGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SAWIGTSMVWAI*THSVMVMSLES Trigger: CGACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGGTACCTATCCACGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223412.2 |
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| CDS CAA 72 bp | GTCACTCCACAGTGCGTGGATAGGTACCTCTATGGTTaGGGCAATCTGAACCCACTCAGTGATGGTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: VTPQCVDRYLYG*GNLNPLSDGHV Trigger: GACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGGTACCTATCCACGCACTGTGGAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223412.2 |
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| CDS CAA 90 bp | GATGACAACAAAGCCCTGGTACTGTGCGTAGTGTCTCTCTATGGTTaGGGCAATCTGAACCCACTCAGTGATGGTCATGTCACTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: DDNKALVLCVVSLYG*GNLNPLSDGHVTGV Trigger: GACTCCAGTGACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGAGACACTACGCACAGTACCAGGGCTTTGTTGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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| CDS CAA 72 bp | AAAGCCCTGGTACTGTGCGTAGTGTCTCTCTATGGTTaGGGCAATCTGAACCCACTCAGTGATGGTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: KALVLCVVSLYG*GNLNPLSDGHV Trigger: GACATGACCATCACTGAGTGGGTTCAGATTGCCCAAACCATAGAGAGACACTACGCACAGTACCAGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079400.6 |
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