RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASPDH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038704

Ensembl transcript IDs: ENSMUST00000035929.11, ENSMUST00000135624.2, ENSMUST00000146128.8, ENSMUST00000152902.8, ENSMUST00000156957.4

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGGGCCCTCATAGAGCACTGTGCGGGGCCCACTACTGTGGGCTaGAGCCAGGGGTCCCTCCAGCCGGAAGCCATCAGGATGTGTGGC +
Preference number: 1 (lower is better)
Translates to: HRALIEHCAGPTTVG*SQGSLQPEAIRMCG
Trigger: GCCACACATCCTGATGGCTTCCGGCTGGAGGGACCCCTGGCTGCAGCCCACAGTAGTGGGCCCCGCACAGTGCTCTATGAGGGCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR TCA 90 bp GGGCCACTTCTACCACAAGGTCAGGGTGCCTTTCCTCAAGGGCAGTaGGGTCTTGGAGCTGCAGGGCAGGGGGCACACTCCCTGCCATCC +
Preference number: 1 (lower is better)
Translates to: GPLLPQGQGAFPQGQ*GLGAAGQGAHSLPS
Trigger: GGATGGCAGGGAGTGTGCCCCCTGCCCTGCAGCTCCAAGACCTCACTGCCCTTGAGGAAAGGCACCCTGACCTTGTGGTAGAAGTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR GCA 90 bp GCCACAAACACAGTGTGGCCCCAGCGCTTTGAAGCCTCCAGGAGCTaGTGCTCTGTGGTCTGGTCAGCCAGAGCTGAGGGGGATCCCACC +
Preference number: 1 (lower is better)
Translates to: ATNTVWPQRFEASRS*CSVVWSARAEGDPT
Trigger: GGTGGGATCCCCCTCAGCTCTGGCTGACCAGACCACAGAGCAGCAGCTCCTGGAGGCTTCAAAGCGCTGGGGCCACACTGTGTTTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 90 bp TCTACCACAAGGTCAGGGTGCCTTTCCTCAAGGGCAGTGAGGTCTTaGAGCTGCAGGGCAGGGGGCACACTCCCTGCCATCCGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: STTRSGCLSSRAVRS*SCRAGGTLPAIRPG
Trigger: CCCTGGACGGATGGCAGGGAGTGTGCCCCCTGCCCTGCAGCTCCAAGACCTCACTGCCCTTGAGGAAAGGCACCCTGACCTTGTGGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 90 bp AGCCGGAAGCCATCAGGATGTGTGGCCATGGTGACTCGAAGGCTCTaGAGGCCTCCGGCTGCATCCAGTCTGCTGATGTCTTCACTGCCC +
Preference number: 1 (lower is better)
Translates to: SRKPSGCVAMVTRRL*RPPAASSLLMSSLP
Trigger: GGGCAGTGAAGACATCAGCAGACTGGATGCAGCCGGAGGCCTCCAGAGCCTTCGAGTCACCATGGCCACACATCCTGATGGCTTCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 90 bp GGTTTGCATGGCGAAGGATTTGTGCCCCAGATTCATGGATTATTTTaGGGTGGGCCACTTCTACCACAAGGTCAGGGTGCCTTTCCTCAA +
Preference number: 1 (lower is better)
Translates to: GLHGEGFVPQIHGLF*GGPLLPQGQGAFPQ
Trigger: TTGAGGAAAGGCACCCTGACCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CAA 90 bp TTCTACCACAAGGTCAGGGTGCCTTTCCTCAAGGGCAGTGAGGTCTaGGAGCTGCAGGGCAGGGGGCACACTCCCTGCCATCCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: FYHKVRVPFLKGSEV*ELQGRGHTPCHPSR
Trigger: CCTGGACGGATGGCAGGGAGTGTGCCCCCTGCCCTGCAGCTCCAAGACCTCACTGCCCTTGAGGAAAGGCACCCTGACCTTGTGGTAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR GCA 90 bp ACCACGTGCATGTCGGTGAGGCTAAGGTCAGCCACAAGCACCCCAATGACACGGGTGAGGTCTTGGAGCTaGAGGGCAGGGGGCACACTC +
Preference number: 2 (lower is better)
Translates to: TTCMSVRLRSATSTPMTRVRSWS*RAGGTL
Trigger: GAGTGTGCCCCCTGCCCTGCAGCTCCAAGACCTCAC...CCGTGTCATTGGGGTGCTTGTGGCTGACCTTAGCCTCACCGACATGCACGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CCA 90 bp AGGCTAAGGTCAGCCACAAGCACCCCAATGACACGGTCGAAGCCTAGACTGGGGTGCTGCTCTGTGGTCTaGTCAGCCAGAGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: RLRSATSTPMTRSKPRLGCCSVV*SARAEG
Trigger: CCCCTCAGCTCTGGCTGACCAGACCACAGAGCAGCA...CCCCAGTCTAGGCTTCGACCGTGTCATTGGGGTGCTTGTGGCTGACCTTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR TCA 90 bp AGGCTAAGGTCAGCCACAAGCACCCCAATGACACGGTCGAAGCCTAGACTGGGGTTTCCTCAAGGGCAGTaGGGTCTTGGAGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: RLRSATSTPMTRSKPRLGFPQGQ*GLGAAG
Trigger: CCCTGCAGCTCCAAGACCTCACTGCCCTTGAGGAAA...CCCCAGTCTAGGCTTCGACCGTGTCATTGGGGTGCTTGTGGCTGACCTTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR GCA 90 bp CCTAGCAGCTCCACATCCACCACGTGCATGTCGGTGAGGCTAAGGTCAGCCACAAGCCAGGGCAGCAGCTaGCATGGTGTTAGAGTTTCG +
Preference number: 2 (lower is better)
Translates to: PSSSTSTTCMSVRLRSATSQGSS*HGVRVS
Trigger: CGAAACTCTAACACCATGGCAGCTGCTGCCCTGGCT...TGTGGCTGACCTTAGCCTCACCGACATGCACGTGGTGGATGTGGAGCTGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CCA 90 bp TGTGTGGCCATGGTGACTCGAAGGCTCTGGAGGCCTCCGGCTGCATCCAGTCTGTGGATTATTTTGGGGTaGGCCACTTCTACCACAAGG +
Preference number: 2 (lower is better)
Translates to: CVAMVTRRLWRPPAASSLWIILG*ATSTTR
Trigger: CCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCA...CAGACTGGATGCAGCCGGAGGCCTCCAGAGCCTTCGAGTCACCATGGCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CCA 90 bp AGGCTAAGGTCAGCCACAAGCACCCCAATGACACGGTCGAAGCCTAGACTGGGGACCAGGAGGTTTGCATaGCGAAGGATTTGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: RLRSATSTPMTRSKPRLGTRRFA*RRICAP
Trigger: TGGGGCACAAATCCTTCGCCATGCAAACCTCCTGGT...CCCCAGTCTAGGCTTCGACCGTGTCATTGGGGTGCTTGTGGCTGACCTTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR GCA 90 bp GGGCCACAAACACAGTGTGGCCCCAGCGCTTTGAAGCCTCCAGGAGCTGCTGCTATGGCGAAGGATTTGTaGCCCAGATTCATGGATTAT +
Preference number: 2 (lower is better)
Translates to: GPQTQCGPSALKPPGAAAMAKDL*PRFMDY
Trigger: ATAATCCATGAATCTGGGGCACAAATCCTTCGCCAT...AGCAGCAGCTCCTGGAGGCTTCAAAGCGCTGGGGCCACACTGTGTTTGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CAA 90 bp AGGTTTGCATGGCGAAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGGTGGGCCACTTCTACCACAAGGTCAGGGTGCCTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: RFAWRRICAPDSWII*GWATSTTRSGCLSS
Trigger: TGAGGAAAGGCACCCTGACCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR GCA 72 bp GACAGAGCCCACGCACAGGGCCCTCATAGAGCACTGTaGGGGGCCCACTACTGTGGGCTGCAGCCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: DRAHAQGPHRAL*GAHYCGLQPGV
Trigger: GACCCCTGGCTGCAGCCCACAGTAGTGGGCCCCGCACAGTGCTCTATGAGGGCCCTGTGCGTGGGCTCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR GCA 72 bp CTCATAGAGCACTGTGCGGGGCCCACTACTGTGGGCTaGAGCCAGGGGTCCCTCCAGCCGGAAGCCATCAGG +
Preference number: 3 (lower is better)
Translates to: LIEHCAGPTTVG*SQGSLQPEAIR
Trigger: CCTGATGGCTTCCGGCTGGAGGGACCCCTGGCTGCAGCCCACAGTAGTGGGCCCCGCACAGTGCTCTATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR TCA 72 bp GAAGGCTCTGGAGGCCTCCGGCTGCATCCAGTCTGCTaGTGTCTTCACTGCCCCATAGGGCCCCTCGGGCCA +
Preference number: 3 (lower is better)
Translates to: EGSGGLRLHPVC*CLHCPIGPLGP
Trigger: TGGCCCGAGGGGCCCTATGGGGCAGTGAAGACATCAGCAGACTGGATGCAGCCGGAGGCCTCCAGAGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR TCA 72 bp CCTCCAGCCGGAAGCCATCAGGATGTGTGGCCATGGTaGCTCGAAGGCTCTGGAGGCCTCCGGCTGCATCCA +
Preference number: 3 (lower is better)
Translates to: PPAGSHQDVWPW*LEGSGGLRLHP
Trigger: TGGATGCAGCCGGAGGCCTCCAGAGCCTTCGAGTCACCATGGCCACACATCCTGATGGCTTCCGGCTGGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR GCA 72 bp ACAGTGTGGCCCCAGCGCTTTGAAGCCTCCAGGAGCTaGTGCTCTGTGGTCTGGTCAGCCAGAGCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: TVWPQRFEASRS*CSVVWSARAEG
Trigger: CCCCTCAGCTCTGGCTGACCAGACCACAGAGCAGCAGCTCCTGGAGGCTTCAAAGCGCTGGGGCCACACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CAA 90 bp ACAAGCACCCCAATGACACGGTCGAAGCCTAGACTGGGGGCAGCCAGGGCAGCATGTGGCCCCAGCGCTTaGAAGCCTCCAGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: TSTPMTRSKPRLGAARAACGPSA*KPPGAA
Trigger: AGCAGCTCCTGGAGGCTTCAAAGCGCTGGGGCCACA...TGCTGCCCTGGCTGCCCCCAGTCTAGGCTTCGACCGTGTCATTGGGGTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 72 bp CCATCAGGATGTGTGGCCATGGTGACTCGAAGGCTCTaGAGGCCTCCGGCTGCATCCAGTCTGCTGATGTCT +
Preference number: 3 (lower is better)
Translates to: PSGCVAMVTRRL*RPPAASSLLMS
Trigger: AGACATCAGCAGACTGGATGCAGCCGGAGGCCTCCAGAGCCTTCGAGTCACCATGGCCACACATCCTGATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CAA 90 bp AGGGCCCCTCGGGCCACAAACACAGTGTGGCCCCAGCGCTTTGAAGCCTCCAGGGATTCATGGATTATTTaGGGGTGGGCCACTTCTACC +
Preference number: 3 (lower is better)
Translates to: RAPRATNTVWPQRFEASRDSWII*GWATST
Trigger: GGTAGAAGTGGCCCACCCCAAAATAATCCATGAATC...CCTGGAGGCTTCAAAGCGCTGGGGCCACACTGTGTTTGTGGCCCGAGGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR-3UTR CAA 90 bp ACATCCACCACGTGCATGTCGGTGAGGCTAAGGTCAGCCACAAGCACCCCAATGTGCATGGCGAAGGATTaGTGCCCCAGATTCATGGAT +
Preference number: 3 (lower is better)
Translates to: TSTTCMSVRLRSATSTPMCMAKD*CPRFMD
Trigger: ATCCATGAATCTGGGGCACAAATCCTTCGCCATGCA...CATTGGGGTGCTTGTGGCTGACCTTAGCCTCACCGACATGCACGTGGTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR GCA 72 bp GGATCCCACCAGGAGGTTTGCATGGCGAAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: GSHQEVCMAKDL*PRFMDYFGVGH
Trigger: GTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACCTCCTGGTGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 72 bp GGCGAAGGATTTGTGCCCCAGATTCATGGATTATTTTaGGGTGGGCCACTTCTACCACAAGGTCAGGGTGCC +
Preference number: 3 (lower is better)
Translates to: GEGFVPQIHGLF*GGPLLPQGQGA
Trigger: GGCACCCTGACCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CCA 72 bp GCCAGAGCTGAGGGGGATCCCACCAGGAGGTTTGCATaGCGAAGGATTTGTGCCCCAGATTCATGGATTATT +
Preference number: 3 (lower is better)
Translates to: ARAEGDPTRRFA*RRICAPDSWII
Trigger: AATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACCTCCTGGTGGGATCCCCCTCAGCTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
3UTR CAA 72 bp TGGCGAAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGGTGGGCCACTTCTACCACAAGGTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: WRRICAPDSWII*GWATSTTRSGC
Trigger: GCACCCTGACCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
CDS GCA 90 bp CGCCAGGCTGGGCTGGGTTCTCTCTGTGGGTGTGCACGGCAAAGCTaGGACCTGAAGGCCCTGGGGGTCCTAGCAGCTCCACATCCACCA +
Preference number: 5 (lower is better)
Translates to: RQAGLGSLCGCARQS*DLKALGVLAAPHPP
Trigger: TGGTGGATGTGGAGCTGCTAGGACCCCCAGGGCCTTCAGGTCGCAGCTTTGCCGTGCACACCCACAGAGAGAACCCAGCCCAGCCTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000035929.11
ENSMUST00000135624.2
ENSMUST00000146128.8
ENSMUST00000156957.4
CDS CCA 90 bp TGCCAGAAGGCTGTAACAGTAGCAGAGCCGGTGACAGCGCCAGGCTaGGCTGGGTTCTCTCTGTGGGTGTGCACGGCAAAGCTGCGACCT +
Preference number: 5 (lower is better)
Translates to: CQKAVTVAEPVTAPG*AGFSLWVCTAKLRP
Trigger: AGGTCGCAGCTTTGCCGTGCACACCCACAGAGAGAACCCAGCCCAGCCTGGCGCTGTCACCGGCTCTGCTACTGTTACAGCCTTCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035929.11
ENSMUST00000146128.8
ENSMUST00000156957.4
CDS GCA 90 bp CGACCTGAAGGCCCTGGGGGTCCTAGCAGCTCCACATCCACCACGTaGATGTCGGTGAGGCTAAGGTCAGCCACAAGCACCCCAATGACA +
Preference number: 5 (lower is better)
Translates to: RPEGPGGPSSSTSTT*MSVRLRSATSTPMT
Trigger: TGTCATTGGGGTGCTTGTGGCTGACCTTAGCCTCACCGACATGCACGTGGTGGATGTGGAGCTGCTAGGACCCCCAGGGCCTTCAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035929.11
ENSMUST00000146128.8
ENSMUST00000156957.4
CDS TCA 90 bp TCACGGTTCCACACAAAAACAAGTTCTAGGCCCAGTTCTGATCCCTaGGCCAGAAGGCGGGACACAAGGGACCAGGCGGCCATAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SRFHTKTSSRPSSDP*ARRRDTRDQAAIAH
Trigger: GTGGGCTATGGCCGCCTGGTCCCTTGTGTCCCGCCTTCTGGCTCAGGGATCAGAACTGGGCCTAGAACTTGTTTTTGTGTGGAACCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
CDS GCA 90 bp CATGGTGACTCGAAGGCTCAGGAGGTTTGCATGGCGAAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGGTGGGCCACTTCTACCAC +
Preference number: 5 (lower is better)
Translates to: HGDSKAQEVCMAKDL*PRFMDYFGVGHFYH
Trigger: GTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACCTCCTGAGCCTTCGAGTCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156957.4
CDS GCA 72 bp GGCCCTGGGGGTCCTAGCAGCTCCACATCCACCACGTaGATGTCGGTGAGGCTGGAGGCCTCCGGCTGCATC +
Preference number: 6 (lower is better)
Translates to: GPGGPSSSTSTT*MSVRLEASGCI
Trigger: GATGCAGCCGGAGGCCTCCAGCCTCACCGACATGCACGTGGTGGATGTGGAGCTGCTAGGACCCCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135624.2
CDS GCA 72 bp GGCCCTGGGGGTCCTAGCAGCTCCACATCCACCACGTaGATGTCGGTGAGGCTAAGGTCAGCCACAAGCACC +
Preference number: 6 (lower is better)
Translates to: GPGGPSSSTSTT*MSVRLRSATST
Trigger: GGTGCTTGTGGCTGACCTTAGCCTCACCGACATGCACGTGGTGGATGTGGAGCTGCTAGGACCCCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035929.11
ENSMUST00000146128.8
ENSMUST00000156957.4
CDS TCA 72 bp CACACAAAAACAAGTTCTAGGCCCAGTTCTGATCCCTaGGCCAGAAGGCGGGACACAAGGGACCAGGCGGCC +
Preference number: 6 (lower is better)
Translates to: HTKTSSRPSSDP*ARRRDTRDQAA
Trigger: GGCCGCCTGGTCCCTTGTGTCCCGCCTTCTGGCTCAGGGATCAGAACTGGGCCTAGAACTTGTTTTTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152902.8
CDS TCA 72 bp CACACAAAAACAAGTTCTAGGCCCAGTTCTGATCCCTaGGCCAGAAGGCGGGACACAAGGGACTGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: HTKTSSRPSSDP*ARRRDTRDCPR
Trigger: CCTGGGACAGTCCCTTGTGTCCCGCCTTCTGGCTCAGGGATCAGAACTGGGCCTAGAACTTGTTTTTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035929.11
CDS TCA 72 bp CACACAAAAACAAGTTCTAGGCCCAGTTCTGATCCCTaGGCCAGAAGGCGGGACACAAGGGACTGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: HTKTSSRPSSDP*ARRRDTRDCLV
Trigger: CACCAGACAGTCCCTTGTGTCCCGCCTTCTGGCTCAGGGATCAGAACTGGGCCTAGAACTTGTTTTTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000146128.8
CDS GCA 72 bp TCGAAGGCTCAGGAGGTTTGCATGGCGAAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGGTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: SKAQEVCMAKDL*PRFMDYFGVGH
Trigger: GTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCCATGCAAACCTCCTGAGCCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156957.4