Pregenerated sensors for ASPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020774Ensembl transcript IDs: ENSMUST00000021119.9, ENSMUST00000134079.2, ENSMUST00000141898.2, ENSMUST00000155630.9, ENSMUST00000184572.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGACGTTCATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATaGTTACTGCTTGAGGCACGGGGCCAGGCACTGAGGAAAAGAACT | + |
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Preference number: 1 (lower is better) Translates to: KTFINLSFPFRTWPG*LLLEARGQALRKRT Trigger: AGTTCTTTTCCTCAGTGCCTGGCCCCGTGCCTCAAGCAGTAAGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAATGAACGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| 3UTR TCA 90 bp | CTTGAGCCCTTCTCACTTCATATGGCAAGTCTTCAGACATCTCTTTaGTGCATTTTTCTGGAACAAGTGTTGACATCACAATACAATACT | + |
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Preference number: 1 (lower is better) Translates to: LEPFSLHMASLQTSL*CIFLEQVLTSQYNT Trigger: AGTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAGAAGGGCTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| 3UTR GCA 72 bp | ATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATaGTTACTGCTTGAGGCACGGGGCCAGGCACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: INLSFPFRTWPG*LLLEARGQALR Trigger: CCTCAGTGCCTGGCCCCGTGCCTCAAGCAGTAAGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGCACTTATGCATTACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTAAACCAGAAGCACACTaGCCTGTACATAGCACATCC | + |
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Preference number: 3 (lower is better) Translates to: LALMHYLKTYSLSCCVLSKPEAH*PVHSTS Trigger: GGATGTGCTATGTACAGGCAAGTGTGCTTCTGGTTT...ACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTAATGCATAAGTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| 3UTR TCA 72 bp | AGACATCTCTTTGATGCATTTTTCTGGAACAAGTGTTaGCATCACAATACAATACTCTCAAGTGGGCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: RHLFDAFFWNKC*HHNTILSSGLA Trigger: AGCTAGCCCACTTGAGAGTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAAAGAGATGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| 3UTR GCA 72 bp | GCACTTATGCATTACTTGAAAACATATAGTCTGTCCTaGTGTGTGCTAAGTTGCACTAGCATGTATTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: ALMHYLKTYSLS*CVLSCTSMYFN Trigger: ATTGAAATACATGCTAGTGCAACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTAATGCATAAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | CGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTGTCAGTTCATTTCCATaGGTCCCTCCAAAGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RGQALRKRTRVRHSGLGGVSSFP*VPPKMA Trigger: TGCCATCTTTGGAGGGACTCATGGAAATGAACTGAC...ACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | CGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTCCTGCAGATTAGGATaGATAACAGCAGCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGQALRKRTRVRHSGLGGSCRLG*ITAAMS Trigger: AGACATGGCTGCTGTTATTCATCCTAATCTGCAGGA...ACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | CGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTACCAACAGGATACTTaGCAATGGAACGAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RGQALRKRTRVRHSGLGGYQQDT*QWNEWL Trigger: CAACCACTCGTTCCATTGCCAAGTATCCTGTTGGTA...ACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | TGCTTACTGCTTGAGGCACGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGATCTCCAGGGTGCAATaGTTTCCAGTCTTGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: CLLLEARGQALRKRTRVRISRVQ*FPVLIL Trigger: CAGGATCAAGACTGGAAACCATTGCACCCTGGAGAT...CCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCGTGCCTCAAGCAGTAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | TGGCCTGGATGCTTACTGCTTGAGGCACGGGGCCAGGCACTGAGGAAAAGAACTGGTTGCATATTTGAGTaGAGGATGCTCAATGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: WPGCLLLEARGQALRKRTGCIFE*RMLNEI Trigger: TATCTCATTGAGCATCCTTCACTCAAATATGCAACC...AGTTCTTTTCCTCAGTGCCTGGCCCCGTGCCTCAAGCAGTAAGCATCCAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR GCA 90 bp | AGGCACTCTGGTCTTGGAGGTTTACAGAGTTCTAGGTGTTTGCAAGACTCCTATCTTCACGTCCAGCCCTaGTCTGTGAACTTCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RHSGLGGLQSSRCLQDSYLHVQP*SVNFSA Trigger: GGCACTGAAGTTCACAGAGCAGGGCTGGACGTGAAG...ATAGGAGTCTTGCAAACACCTAGAACTCTGTAAACCTCCAAGACCAGAGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | AGGCACTCTGGTCTTGGAGGTTTACAGAGTTCTAGGTGTTTGCAAGACTCCTATTCCAGCCCTGCTCTGTaGACTTCAGTGCCATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RHSGLGGLQSSRCLQDSYSSPAL*TSVPFL Trigger: AAGGAATGGCACTGAAGTTCACAGAGCAGGGCTGGA...ATAGGAGTCTTGCAAACACCTAGAACTCTGTAAACCTCCAAGACCAGAGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR GCA 90 bp | CTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGGAACACCAAGGATGGAGGATTaGCTCCTGCCTCAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LTSYGKSSDISLMHFSGTPRMED*LLPQLP Trigger: GGGAAGCTGAGGCAGGAGGCAATCCTCCATCCTTGG...TGTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | CGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTCCACTTTCATTCCTTaGATAATCAACTTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RGQALRKRTRVRHSGLGGSTFIP*IINFLH Trigger: ATGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGA...ACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | TTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTTACTGCTTGAGGCACGTCAGTTCATTTCCATaGGTCCCTCCAAAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIYPFLSEPGLDAYCLRHVSSFP*VPPKMA Trigger: TGCCATCTTTGGAGGGACTCATGGAAATGAACTGAC...GTGCCTCAAGCAGTAAGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR GCA 90 bp | CTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGGAACACTTCACGTCCAGCCCTaGTCTGTGAACTTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTSYGKSSDISLMHFSGTLHVQP*SVNFSA Trigger: GGCACTGAAGTTCACAGAGCAGGGCTGGACGTGAAG...TGTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | AGGCACTCTGGTCTTGGAGGTTTACAGAGTTCTAGGTGTTTGCAAGACTCCTATTACCAACAGGATACTTaGCAATGGAACGAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RHSGLGGLQSSRCLQDSYYQQDT*QWNEWL Trigger: CAACCACTCGTTCCATTGCCAAGTATCCTGTTGGTA...ATAGGAGTCTTGCAAACACCTAGAACTCTGTAAACCTCCAAGACCAGAGTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | CTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGGAACATTCTGCAGCCAAGGATaGAGGATTGCCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTSYGKSSDISLMHFSGTFCSQG*RIASCL Trigger: GAGGCAGGAGGCAATCCTCCATCCTTGGCTGCAGAA...TGTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR TCA 90 bp | ATTTTTCTGGAACAAGTGTTGACATCACAATACAATACTCTCAAGTGGGCTAGCTCCAGCCCTGCTCTGTaGACTTCAGTGCCATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: IFLEQVLTSQYNTLKWASSSPAL*TSVPFL Trigger: AAGGAATGGCACTGAAGTTCACAGAGCAGGGCTGGA...GCTAGCCCACTTGAGAGTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCTTGGAGGTTTACAGAGTTCTAGGTGTTTGCAAGACTCCTATAACTGAGTCCTGCAGATTAGGATaGATAACAGCAGCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LVLEVYRVLGVCKTPITESCRLG*ITAAMS Trigger: AGACATGGCTGCTGTTATTCATCCTAATCTGCAGGA...CTCAGTTATAGGAGTCTTGCAAACACCTAGAACTCTGTAAACCTCCAAGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR GCA 90 bp | TTAGCACTTATGCATTACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTCTTCACGTCCAGCCCTaGTCTGTGAACTTCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LALMHYLKTYSLSCCVLSLHVQP*SVNFSA Trigger: GGCACTGAAGTTCACAGAGCAGGGCTGGACGTGAAG...ACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTAATGCATAAGTGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR GCA 90 bp | GACATCTCTTTGATGCATTTTTCTGGAACAAGTGTTGACATCACAATACAATACTGGAGGATTGCCTCCTaGCTCAGCTTCCCAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DISLMHFSGTSVDITIQYWRIAS*LSFPSS Trigger: GCTGCTTGGGAAGCTGAGGCAGGAGGCAATCCTCCA...GTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAAAGAGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGACGTTCATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTTGGATTGGTAATGAATaGCTTCACGTCCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FERRSLIYPFLSEPGLDAWIGNE*LHVQPC Trigger: GCAGGGCTGGACGTGAAGCCATTCATTACCAATCCA...AGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAATGAACGTCTTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGGAACTGGATTGGTAATGAATaGCTTCACGTCCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SHFIWQVFRHLFDAFFWNWIGNE*LHVQPC Trigger: GCAGGGCTGGACGTGAAGCCATTCATTACCAATCCA...GTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | TACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTTGCACTAGCATGTATTGGATTGGTAATGAATaGCTTCACGTCCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YLKTYSLSCCVLSCTSMYWIGNE*LHVQPC Trigger: GCAGGGCTGGACGTGAAGCCATTCATTACCAATCCA...ATACATGCTAGTGCAACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGGAACGTCAGTTCATTTCCATaGGTCCCTCCAAAGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: SHFIWQVFRHLFDAFFWNVSSFP*VPPKMA Trigger: TGCCATCTTTGGAGGGACTCATGGAAATGAACTGAC...GTTCCAGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGACGTTCATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTATCTCCAGGGTGCAATaGTTTCCAGTCTTGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: FERRSLIYPFLSEPGLDAISRVQ*FPVLIL Trigger: CAGGATCAAGACTGGAAACCATTGCACCCTGGAGAT...AGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAATGAACGTCTTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | TACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTTGCACTAGCATGTATTTCATTCACAAACACTaGGTACACGGTACAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YLKTYSLSCCVLSCTSMYFIHKH*VHGTVS Trigger: GGAGACTGTACCGTGTACCCAGTGTTTGTGAATGAA...ATACATGCTAGTGCAACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | TTGATGCATTTTTCTGGAACAAGTGTTGACATCACAATACAATACTCTCAAGTGGCTAGAATTGCAGGCTaGGGGCTGTCTGGACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LMHFSGTSVDITIQYSQVARIAG*GLSGQN Trigger: ATTTTGTCCAGACAGCCCCCAGCCTGCAATTCTAGC...CACTTGAGAGTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGACGTTCATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTCAGGATACTTGGCAATaGAACGAGTGGTTGCATATT | + |
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Preference number: 4 (lower is better) Translates to: FERRSLIYPFLSEPGLDAQDTWQ*NEWLHI Trigger: AATATGCAACCACTCGTTCCATTGCCAAGTATCCTG...AGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAATGAACGTCTTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCTTGGAGGTTTACAGAGTTCTAGGTGTTTGCAAGACTCCTATAACTGAGTCCACTTTCATTCCTTaGATAATCAACTTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LVLEVYRVLGVCKTPITESTFIP*IINFLH Trigger: ATGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGA...CTCAGTTATAGGAGTCTTGCAAACACCTAGAACTCTGTAAACCTCCAAGACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGACGTTCATTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTGGTTGCATATTTGAGTaGAGGATGCTCAATGAGATA | + |
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Preference number: 4 (lower is better) Translates to: FERRSLIYPFLSEPGLDAGCIFE*RMLNEI Trigger: TATCTCATTGAGCATCCTTCACTCAAATATGCAACC...AGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAATGAACGTCTTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CCA 90 bp | TTAGCACTTATGCATTACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTCAGGATACTTGGCAATaGAACGAGTGGTTGCATATT | + |
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Preference number: 4 (lower is better) Translates to: LALMHYLKTYSLSCCVLSQDTWQ*NEWLHI Trigger: AATATGCAACCACTCGTTCCATTGCCAAGTATCCTG...ACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTAATGCATAAGTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | CGGGGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTCCACCGCCCTTGGATaGGTAATGAATGGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: RGQALRKRTRVRHSGLGGSTALG*VMNGFT Trigger: CGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGA...ACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGATGCTTACTGCTTGAGGCACGGGGCCAGGCACTGAGGAAAAGAACTCAATGGTTTCCAGTCTaGATCCTGCAGATTAGGATG | + |
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Preference number: 5 (lower is better) Translates to: WPGCLLLEARGQALRKRTQWFPV*ILQIRM Trigger: CATCCTAATCTGCAGGATCAAGACTGGAAACCATTG...AGTTCTTTTCCTCAGTGCCTGGCCCCGTGCCTCAAGCAGTAAGCATCCAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS CCA 90 bp | AATGTATCTGGTGCACTTCTCCACCGCCCTTGGATTGGTAATGAATaGCTTCACGTCCAGCCCTGCTCTGTGAACTTCAGTGCCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: NVSGALLHRPWIGNE*LHVQPCSVNFSAIP Trigger: AGGAATGGCACTGAAGTTCACAGAGCAGGGCTGGACGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGAGAAGTGCACCAGATACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021119.9 ENSMUST00000134079.2 ENSMUST00000141898.2 ENSMUST00000155630.9 ENSMUST00000184572.8 |
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| CDS CCA 90 bp | ATTCAGGTCACAGTCAATGTATCTGGTGCACTTCTCCACCGCCCTTaGATTGGTAATGAATGGCTTCACGTCCAGCCCTGCTCTGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: IQVTVNVSGALLHRP*IGNEWLHVQPCSVN Trigger: GTTCACAGAGCAGGGCTGGACGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGAGAAGTGCACCAGATACATTGACTGTGACCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021119.9 ENSMUST00000134079.2 ENSMUST00000141898.2 ENSMUST00000155630.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTTATCCACCGCCCTTGGATaGGTAATGAATGGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: GQALRKRTRVRHSGLGGLSTALG*VMNGFT Trigger: CGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGA...TAAACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | GCCCTTCTCACTTCATATGGCAAGTCTTCAGACATCTCTTTGATGCATTTTTCTGCCAAGGATGGAGGATaGCCTCCTGCCTCAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ALLTSYGKSSDISLMHFSAKDGG*PPASAS Trigger: GGAAGCTGAGGCAGGAGGCAATCCTCCATCCTTGGC...AGAAAAATGCATCAAAGAGATGTCTGAAGACTTGCCATATGAAGTGAGAAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTTAATACCAACAGGATACTaGGCAATGGAACGAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GQALRKRTRVRHSGLGGLIPTGY*AMERVV Trigger: AACCACTCGTTCCATTGCCAAGTATCCTGTTGGTAT...TAAACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCACTGAGGAAAAGAACTAGAGTAAGGCACTCTGGTCTTGGAGGTTTACTCCACTTTCATTCCTaGGATAATCAACTTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GQALRKRTRVRHSGLGGLLHFHS*DNQLSP Trigger: TGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGAG...TAAACCTCCAAGACCAGAGTGCCTTACTCTAGTTCTTTTCCTCAGTGCCTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | TTGATGCATTTTTCTGGAACAAGTGTTGACATCACAATACAATACTCTCAAGTGCCCAAGCAGCTAGAATaGCAGGCTGGGGGCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LMHFSGTSVDITIQYSQVPKQLE*QAGGCL Trigger: CAGACAGCCCCCAGCCTGCAATTCTAGCTGCTTGGG...CACTTGAGAGTATTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CAA 90 bp | TCAGACATCTCTTTGATGCATTTTTCTGGAACAAGTGTTGACATCACAATACAATCCACCGCCCTTGGATaGGTAATGAATGGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: SDISLMHFSGTSVDITIQSTALG*VMNGFT Trigger: CGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGA...TTGTATTGTGATGTCAACACTTGTTCCAGAAAAATGCATCAAAGAGATGTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141898.2 |
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| CDS-3UTR CAA 90 bp | TTAATTTATCCTTTCCTTTCAGAACCTGGCCTGGATGCTTACTGCTTGAGGCACCTCCACTTTCATTCCTaGGATAATCAACTTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LIYPFLSEPGLDAYCLRHLHFHS*DNQLSP Trigger: TGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGAG...GTGCCTCAAGCAGTAAGCATCCAGGCCAGGTTCTGAAAGGAAAGGATAAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | TACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTTGCACTAGCATGTATCAATGGTTTCCAGTCTaGATCCTGCAGATTAGGATG | + |
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Preference number: 5 (lower is better) Translates to: YLKTYSLSCCVLSCTSMYQWFPV*ILQIRM Trigger: CATCCTAATCTGCAGGATCAAGACTGGAAACCATTG...ATACATGCTAGTGCAACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS-3UTR CAA 90 bp | TTAGCACTTATGCATTACTTGAAAACATATAGTCTGTCCTGCTGTGTGCTAAGTTCTTCAGACATCTCTTaGCTAAGATTTTCAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LALMHYLKTYSLSCCVLSSSDIS*LRFSRS Trigger: TGACCTTGAAAATCTTAGCAAAGAGATGTCTGAAGA...ACTTAGCACACAGCAGGACAGACTATATGTTTTCAAGTAATGCATAAGTGCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS CCA 90 bp | CAGATTAGGATGAATAACAGCAGCCATGTCTCCACTTTCATTCCTTaGATAATCAACTTTCTCCATTATTTTATAGACGTCAATAGAACA | + |
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Preference number: 5 (lower is better) Translates to: QIRMNNSSHVSTFIP*IINFLHYFIDVNRT Trigger: TGTTCTATTGACGTCTATAAAATAATGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGAGACATGGCTGCTGTTATTCATCCTAATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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| CDS CCA 72 bp | GGTGCACTTCTCCACCGCCCTTGGATTGGTAATGAATaGCTTCACGTCCAGCCCTGCTCTGTGAACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GALLHRPWIGNE*LHVQPCSVNFS Trigger: ACTGAAGTTCACAGAGCAGGGCTGGACGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGAGAAGTGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021119.9 ENSMUST00000134079.2 ENSMUST00000141898.2 ENSMUST00000155630.9 ENSMUST00000184572.8 |
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| CDS CAA 72 bp | TCAATGTATCTGGTGCACTTCTCCACCGCCCTTGGATaGGTAATGAATGGCTTCACGTCCAGCCCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SMYLVHFSTALG*VMNGFTSSPAL Trigger: CAGAGCAGGGCTGGACGTGAAGCCATTCATTACCAATCCAAGGGCGGTGGAGAAGTGCACCAGATACATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021119.9 ENSMUST00000134079.2 ENSMUST00000141898.2 ENSMUST00000155630.9 ENSMUST00000184572.8 |
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| CDS CCA 72 bp | ATGAATAACAGCAGCCATGTCTCCACTTTCATTCCTTaGATAATCAACTTTCTCCATTATTTTATAGACGTC | + |
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Preference number: 6 (lower is better) Translates to: MNNSSHVSTFIP*IINFLHYFIDV Trigger: GACGTCTATAAAATAATGGAGAAAGTTGATTATCCAAGGAATGAAAGTGGAGACATGGCTGCTGTTATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021119.9 ENSMUST00000184572.8 |
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