Pregenerated sensors for ASNS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029752Ensembl transcript IDs: ENSMUST00000031766.12, ENSMUST00000115542.8
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGACAGTTCGAGACCGTGTaGAGCAGTAGTGCGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRQFETV*SSSAVG Trigger: GCCGACCGCACTACTGCTGCACACGGTCTCGAACTG...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTCAGTTCGAGACCGTGTaGAGCAGTAGTGCGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SFFLIVSLSRPSEPEETFQFETV*SSSAVG Trigger: GCCGACCGCACTACTGCTGCACACGGTCTCGAACTG...AAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR TCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAACCACAGCCAAGCGGTaGAAGCCAAAGCAGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRTTAKR*KPKQQL Trigger: CAACTGCTGCTTTGGCTTTCACCGCTTGGCTGTGGT...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGGCTGAGTCTCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAAACTTCTGGGAGGCTaGAGACATCATCTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: WLSLILSDCVAVSTFRAGKLLGG*RHHLII Trigger: GATGATGAGATGATGTCTGCAGCCTCCCAGAAGTTT...TCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGAGACTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTCTCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGATTGAAGGGAAACTTCTaGGAGGCTGCAGACATCATC | + |
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Preference number: 4 (lower is better) Translates to: LSLILSDCVAVSTFRAGRLKGNF*EAADII Trigger: GATGATGTCTGCAGCCTCCCAGAAGTTTCCCTTCAA...TCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGAGACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR TCA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGACCACAGCCAAGCGGTaGAAGCCAAAGCAGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SRPSEPEETFTFTQECRETTAKR*KPKQQL Trigger: CAACTGCTGCTTTGGCTTTCACCGCTTGGCTGTGGT...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAATTCTCAAAGCGAAATaGATCTGGCCCCCTGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRILKAK*IWPPVR Trigger: GCGCACAGGGGGCCAGATGCATTTCGCTTTGAGAAT...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAAAGCGAAATGCATCTaGCCCCCTGTGCGCGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LCRCLDLQSRKKHLLLHKKAKCI*PPVRDL Trigger: AAGATCGCGCACAGGGGGCCAGATGCATTTCGCTTT...CTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGCCAATCAGCCCGGCCTaGGTAATGGCGTTCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LCRCLDLQSRKKHLLLHKPISPA*VMAFKD Trigger: ATCTTTGAACGCCATTACCCAGGCCGGGCTGATTGG...CTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTCTGTGTAAGTTCATCTaGCCCCTCTCCGGAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FLIVSLSRPSEPEETFTFLCKFI*PLSGED Trigger: ATCTTCTCCGGAGAGGGGTCAGATGAACTTACACAG...AAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTCCACGCTGTCATAGATaGCATGCAATGGTTCATCCG | + |
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Preference number: 4 (lower is better) Translates to: FLIVSLSRPSEPEETFTFPRCHR*HAMVHP Trigger: CGGATGAACCATTGCATGCCATCTATGACAGCGTGG...AAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | CGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTATTGAAGGGAAACTTCTaGGAGGCTGCAGACATCATC | + |
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Preference number: 4 (lower is better) Translates to: RCLDLQSRKKHLLLHKSVLKGNF*EAADII Trigger: GATGATGTCTGCAGCCTCCCAGAAGTTTCCCTTCAA...TACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGCTTCCAATATAATTTaGCACCTTTCTAGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRASNII*HLSSGQ Trigger: CTGGCCGCTAGAAAGGTGGCAAATTATATTGGAAGC...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGCTTCCAATATAATTTaGCACCTTTCTAGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CRCLDLQSRKKHLLLHKSASNII*HLSSGQ Trigger: CTGGCCGCTAGAAAGGTGGCAAATTATATTGGAAGC...ACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR TCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGATACAGTGATGGTATTTaGCCATTTCCACAGACGCAA | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRYSDGI*PFPQTQ Trigger: TTGCGTCTGTGGAAATGGTCAAATACCATCACTGTA...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGATGGAAATTAAATACATaGCCACAGATGCCCGAACTG | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRWKLNT*PQMPEL Trigger: CAGTTCGGGCATCTGTGGGCATGTATTTAATTTCCA...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGAAACTTCTGGGAGGCTaGAGACATCATCTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: SRPSEPEETFTFTQECREKLLGG*RHHLII Trigger: GATGATGAGATGATGTCTGCAGCCTCCCAGAAGTTT...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR TCA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGTACAGTGATGGTATTTaGCCATTTCCACAGACGCAA | + |
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Preference number: 4 (lower is better) Translates to: SRPSEPEETFTFTQECREYSDGI*PFPQTQ Trigger: TTGCGTCTGTGGAAATGGTCAAATACCATCACTGTA...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTCCACAGACGCAACTTTaGCATTTGGTTTTAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: CRCLDLQSRKKHLLLHKSPQTQL*HLVLNP Trigger: TGGATTTAAAACCAAATGGCAAAGTTGCGTCTGTGG...ACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGTGGAAATTAAATACATaGCCACAGATGCCCGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SRPSEPEETFTFTQECREWKLNT*PQMPEL Trigger: CAGTTCGGGCATCTGTGGGCATGTATTTAATTTCCA...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR GCA 90 bp | TTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTCCACAGACGCAACTTTaGCATTTGGTTTTAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: FLIVSLSRPSEPEETFTFPQTQL*HLVLNP Trigger: TGGATTTAAAACCAAATGGCAAAGTTGCGTCTGTGG...AAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGATTAAGAAGGGAGTGGTaGAGTGTTTTAAGGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRLRREW*SVLRKQ Trigger: TTGTTTCCTTAAAACACTCCACCACTCCCTTCTTAA...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGACTTTTAAGAAGGGAGTaGTGGAGTGTTTTAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRLLRRE*WSVLRK Trigger: TTTCCTTAAAACACTCCACCACTCCCTTCTTAAAAG...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CCA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGCTTTTAAGAAGGGAGTaGTGGAGTGTTTTAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SRPSEPEETFTFTQECRELLRRE*WSVLRK Trigger: TTTCCTTAAAACACTCCACCACTCCCTTCTTAAAAG...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS CCA 90 bp | GATCCACTTAGGCATCCAATAATGAGTCAGCCAATCAGCCCGGCCTaGGTAATGGCGTTCAAAGATCTGACGGTAGAAGTAGCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DPLRHPIMSQPISPA*VMAFKDLTVEVAFL Trigger: AAGGAAGGCTACTTCTACCGTCAGATCTTTGAACGCCATTACCCAGGCCGGGCTGATTGGCTGACTCATTATTGGATGCCTAAGTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTTTGGGCCTCCTTGAGTaGCTTCAGCAGAGAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CRCLDLQSRKKHLLLHKSLGLLE*LQQRGS Trigger: GCTGCCTCTCTGCTGAAGCAACTCAAGGAGGCCCAA...ACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGTCTCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGATCTTTGGGTAGCAGGTaGCAGTCCTCAAAAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: WLSLILSDCVAVSTFRAGSLGSR*QSSKVS Trigger: AGAGACTTTTGAGGACTGCAACCTGCTACCCAAAGA...TCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGAGACTCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAGAGAGTTGGGCCTCCTTGAGTaGCTTCAGCAGAGAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRPSEPEETFTFTQECRELGLLE*LQQRGS Trigger: GCTGCCTCTCTGCTGAAGCAACTCAAGGAGGCCCAA...CTCTCTACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGTCTCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGATTAGTTTTGGGAGTATaGAAGGGAAACTTCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WLSLILSDCVAVSTFRAGLVLGV*KGNFWE Trigger: CTCCCAGAAGTTTCCCTTCAATACTCCCAAAACTAA...TCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGAGACTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTTCTTTGGGTAGCAGGTaGCAGTCCTCAAAAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SFFLIVSLSRPSEPEETFSLGSR*QSSKVS Trigger: AGAGACTTTTGAGGACTGCAACCTGCTACCCAAAGA...AAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TCATTCTTTCTGATTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTTTAGTTTTGGGAGTATaGAAGGGAAACTTCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SFFLIVSLSRPSEPEETFLVLGV*KGNFWE Trigger: CTCCCAGAAGTTTCCCTTCAATACTCCCAAAACTAA...AAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAATCAGAAAGAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAAGAAATACTTTCTTATaGGCAGTGTCCAGTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: CVAVSTFRAGRNIYFYTRRNTFL*AVSSKM Trigger: CATCTTACTGGACACTGCCAATAAGAAAGTATTTCT...TCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | CGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGAGTGTAAGAAATACTTTCTTATaGGCAGTGTCCAGTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RCLDLQSRKKHLLLHKSVRNTFL*AVSSKM Trigger: CATCTTACTGGACACTGCCAATAAGAAAGTATTTCT...TACACTCTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS-3UTR CAA 90 bp | TTGTGTCGCTGTCTCGACCTTCAGAGCCGGAAGAAACATTTACTTTTACACAAGTTTCTATGCCATTTTTaGGAATTCTCATATCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: LCRCLDLQSRKKHLLLHKFLCHF*EFSYLA Trigger: CGCCAGATATGAGAATTCCAAAAAATGGCATAGAAA...CTTGTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS CCA 72 bp | AGGCATCCAATAATGAGTCAGCCAATCAGCCCGGCCTaGGTAATGGCGTTCAAAGATCTGACGGTAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: RHPIMSQPISPA*VMAFKDLTVEV Trigger: TACTTCTACCGTCAGATCTTTGAACGCCATTACCCAGGCCGGGCTGATTGGCTGACTCATTATTGGATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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| CDS CAA 72 bp | AGGCAGCCAATCCTCCGGTCTGTCATCAAGCGTTTCTaGATAGCGTTGTCAAAAAGGATACGCAGATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RQPILRSVIKRF*IALSKRIRRLF Trigger: GAACAATCTGCGTATCCTTTTTGACAACGCTATCAAGAAACGCTTGATGACAGACCGGAGGATTGGCTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031766.12 ENSMUST00000115542.8 |
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