Pregenerated sensors for ASIC5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028008

Ensembl transcript IDs: ENSMUST00000029641.10, ENSMUST00000107736.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TACTCCTGGTGGACCGTCTTCAGTTGGCGGATGGTCACCCGTGCATaGATTCCCACAGGAGAAGACAAACCTAAGCCATCAAACTGTGGC	+
Preference number: 5 (lower is better) Translates to: YSWWTVFSWRMVTRA*IPTGEDKPKPSNCG Trigger: GCCACAGTTTGATGGCTTAGGTTTGTCTTCTCCTGTGGGAATGCATGCACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 90 bp	GGTAATGAAGTTTCTCAGCTTGATGTTGGGATTGCATTCTCCCCATaGGTACTCCTGGTGGACCGTCTTCAGTTGGCGGATGGTCACCCG	+
Preference number: 5 (lower is better) Translates to: GNEVSQLDVGIAFSP*VLLVDRLQLADGHP Trigger: CGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGAATGCAATCCCAACATCAAGCTGAGAAACTTCATTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS TCA 90 bp	AAATCTAAGGTCTCTGGAGAGCCAGTGTTGTTGGCACTGATTTCCTaGAGGCGGAGGACTTTGGAGACTATGTCCCACAAGAAGAAAATG	+
Preference number: 5 (lower is better) Translates to: KSKVSGEPVLLALIS*RRRTLETMSHKKKM Trigger: CATTTTCTTCTTGTGGGACATAGTCTCCAAAGTCCTCCGCCTTCAGGAAATCAGTGCCAACAACACTGGCTCTCCAGAGACCTTAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS TCA 90 bp	GAAGACAAACCTAAGCCATCAAACTGTGGCTCCTTCTTTGGTGAGTaGATAACAAAGATGACACCAGCATCAGCAAAACCAGGGACTGGG	+
Preference number: 5 (lower is better) Translates to: EDKPKPSNCGSFFGE*ITKMTPASAKPGTG Trigger: CCCAGTCCCTGGTTTTGCTGATGCTGGTGTCATCTTTGTTATTCACTCACCAAAGAAGGAGCCACAGTTTGATGGCTTAGGTTTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS TCA 90 bp	ATTTCTATAATTGTAATCAAACTAGCTCCACAGAACAGTCCCAGCTaGCCGCCAACATCTGCAAGTAACTCAGGCACACTCACGGCCTTC	+
Preference number: 5 (lower is better) Translates to: ISIIVIKLAPQNSPS*PPTSASNSGTLTAF Trigger: GAAGGCCGTGAGTGTGCCTGAGTTACTTGCAGATGTTGGCGGTCAGCTGGGACTGTTCTGTGGAGCTAGTTTGATTACAATTATAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 90 bp	TCTGGTTCTGGGCAATATTATGTATCCCATGAAAGGAAGTGGACATaGCAAAGTCTTGATCGAACTTCTTCCGGTCAGTTGGAGATGGCA	+
Preference number: 5 (lower is better) Translates to: SGSGQYYVSHERKWT*QSLDRTSSGQLEMA Trigger: TGCCATCTCCAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCTTTCATGGGATACATAATATTGCCCAGAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS CCA 90 bp	CTTTGTTCTGGTTCTGGGCAATATTATGTATCCCATGAAAGGAAGTaGACATGGCAAAGTCTTGATCGAACTTCTTCCGGTCAGTTGGAG	+
Preference number: 5 (lower is better) Translates to: LCSGSGQYYVSHERK*TWQSLDRTSSGQLE Trigger: CTCCAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCTTTCATGGGATACATAATATTGCCCAGAACCAGAACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS CCA 90 bp	AGTGAAGCAATTCCCATATTCAGTAAAGACGTGTTTGAAATCCTTTaGACTGCATGTTTTGCCAAAGAACTCACAGTGCACCAAAGTGTC	+
Preference number: 5 (lower is better) Translates to: SEAIPIFSKDVFEIL*TACFAKELTVHQSV Trigger: GACACTTTGGTGCACTGTGAGTTCTTTGGCAAAACATGCAGTCCAAAGGATTTCAAACACGTCTTTACTGAATATGGGAATTGCTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	TCTCCCCATGGGTACTCCTGGTGGACCGTCTTCAGTTaGCGGATGGTCACCCGTGCATGCATTCCCACAGGA	+
Preference number: 6 (lower is better) Translates to: SPHGYSWWTVFS*RMVTRACIPTG Trigger: TCCTGTGGGAATGCATGCACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	TTCTCCCCATGGGTACTCCTGGTGGACCGTCTTCAGTaGGCGGATGGTCACCCGTGCATGCATTCCCACAGG	+
Preference number: 6 (lower is better) Translates to: FSPWVLLVDRLQ*ADGHPCMHSHR Trigger: CCTGTGGGAATGCATGCACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	ATGGGTACTCCTGGTGGACCGTCTTCAGTTGGCGGATaGTCACCCGTGCATGCATTCCCACAGGAGAAGACA	+
Preference number: 6 (lower is better) Translates to: MGTPGGPSSVGG*SPVHAFPQEKT Trigger: TGTCTTCTCCTGTGGGAATGCATGCACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	ATGTTGGGATTGCATTCTCCCCATGGGTACTCCTGGTaGACCGTCTTCAGTTGGCGGATGGTCACCCGTGCA	+
Preference number: 6 (lower is better) Translates to: MLGLHSPHGYSW*TVFSWRMVTRA Trigger: TGCACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGAATGCAATCCCAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	TTGATGTTGGGATTGCATTCTCCCCATGGGTACTCCTaGTGGACCGTCTTCAGTTGGCGGATGGTCACCCGT	+
Preference number: 6 (lower is better) Translates to: LMLGLHSPHGYS*WTVFSWRMVTR Trigger: ACGGGTGACCATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGAATGCAATCCCAACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS TCA 72 bp	GCAAAACCAGGGACTGGGTTGTCAGTGAATTCCTCCTaGTGGACGTCGAGGAGCAGCTTTAAGCCTCTTCCG	+
Preference number: 6 (lower is better) Translates to: AKPGTGLSVNSS*WTSRSSFKPLP Trigger: CGGAAGAGGCTTAAAGCTGCTCCTCGACGTCCATCAGGAGGAATTCACTGACAACCCAGTCCCTGGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS GCA 72 bp	TGGACCGTCTTCAGTTGGCGGATGGTCACCCGTGCATaGATTCCCACAGGAGAAGACAAACCTAAGCCATCA	+
Preference number: 6 (lower is better) Translates to: WTVFSWRMVTRA*IPTGEDKPKPS Trigger: TGATGGCTTAGGTTTGTCTTCTCCTGTGGGAATGCATGCACGGGTGACCATCCGCCAACTGAAGACGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS TCA 72 bp	CACCAGCATCAGCAAAACCAGGGACTGGGTTGTCAGTaGATTCCTCCTGATGGACGTCGAGGAGCAGCTTTA	+
Preference number: 6 (lower is better) Translates to: HQHQQNQGLGCQ*IPPDGRRGAAL Trigger: TAAAGCTGCTCCTCGACGTCCATCAGGAGGAATTCACTGACAACCCAGTCCCTGGTTTTGCTGATGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	GTTTCTCAGCTTGATGTTGGGATTGCATTCTCCCCATaGGTACTCCTGGTGGACCGTCTTCAGTTGGCGGAT	+
Preference number: 6 (lower is better) Translates to: VSQLDVGIAFSP*VLLVDRLQLAD Trigger: ATCCGCCAACTGAAGACGGTCCACCAGGAGTACCCATGGGGAGAATGCAATCCCAACATCAAGCTGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 90 bp	TGTTGTCGTTGGCCATGTGAAGTAATTGACCAAACGACTGTAGATTaGCCACACCAAGAGCGAGACAGAGCCCAGCACCACAGCCAGCCA	+
Preference number: 6 (lower is better) Translates to: CCRWPCEVIDQTTVD*PHQERDRAQHHSQP Trigger: TGGCTGGCTGTGGTGCTGGGCTCTGTCTCGCTCTTGGTGTGGCAAATCTACAGTCGTTTGGTCAATTACTTCACATGGCCAACGACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	CTGGGTATTCTGTTTCCTCACATGACACAGGGCAGCTaGAGTTGTGTGTTCCCATCGTGCATAGTCCCTTAC	+
Preference number: 6 (lower is better) Translates to: LGILFPHMTQGS*SCVFPSCIVPY Trigger: GTAAGGGACTATGCACGATGGGAACACACAACTCCAGCTGCCCTGTGTCATGTGAGGAAACAGAATACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	TGGCCATGTGAAGTAATTGACCAAACGACTGTAGATTaGCCACACCAAGAGCGAGACAGAGCCCAGCACCAC	+
Preference number: 6 (lower is better) Translates to: WPCEVIDQTTVD*PHQERDRAQHH Trigger: GTGGTGCTGGGCTCTGTCTCGCTCTTGGTGTGGCAAATCTACAGTCGTTTGGTCAATTACTTCACATGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	TATTCTGTTTCCTCACATGACACAGGGCAGCTGGAGTaGTGTGTTCCCATCGTGCATAGTCCCTTACGCTCG	+
Preference number: 6 (lower is better) Translates to: YSVSSHDTGQLE*CVPIVHSPLRS Trigger: CGAGCGTAAGGGACTATGCACGATGGGAACACACAACTCCAGCTGCCCTGTGTCATGTGAGGAAACAGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	AACAAAGATGACACCAGCATCAGCAAAACCAGGGACTaGGTTGTCAGTGAATTCCTCCTGATGGACGTCGAG	+
Preference number: 6 (lower is better) Translates to: NKDDTSISKTRD*VVSEFLLMDVE Trigger: CTCGACGTCCATCAGGAGGAATTCACTGACAACCCAGTCCCTGGTTTTGCTGATGCTGGTGTCATCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 90 bp	CTTGATCGAACTTCTTCCGGTCAGTTGGAGATGGCAGTGGTCTCTTaGAGAGGTAACGTTTTATCTTTCCTAAGAGTCCTTTCTCCGCGT	+
Preference number: 6 (lower is better) Translates to: LDRTSSGQLEMAVVS*RGNVLSFLRVLSPR Trigger: ACGCGGAGAAAGGACTCTTAGGAAAGATAAAACGTTACCTCTCAAAGAGACCACTGCCATCTCCAACTGACCGGAAGAAGTTCGATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS TCA 72 bp	ATAAGAAACAGTAGCTGGGTATTCTGTTTCCTCACATaGCACAGGGCAGCTGGAGTTGTGTGTTCCCATCGT	+
Preference number: 6 (lower is better) Translates to: IRNSSWVFCFLT*HRAAGVVCSHR Trigger: ACGATGGGAACACACAACTCCAGCTGCCCTGTGTCATGTGAGGAAACAGAATACCCAGCTACTGTTTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	ATGTATCCCATGAAAGGAAGTGGACATGGCAAAGTCTaGATCGAACTTCTTCCGGTCAGTTGGAGATGGCAG	+
Preference number: 6 (lower is better) Translates to: MYPMKGSGHGKV*IELLPVSWRWQ Trigger: CTGCCATCTCCAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCTTTCATGGGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS CAA 90 bp	AGGAAGTGGACATGGCAAAGTCTTGATCGAACTTCTTCCGGTCAGTaGGAGATGGCAGTGGTCTCTTTGAGAGGTAACGTTTTATCTTTC	+
Preference number: 6 (lower is better) Translates to: RKWTWQSLDRTSSGQ*EMAVVSLRGNVLSF Trigger: GAAAGATAAAACGTTACCTCTCAAAGAGACCACTGCCATCTCCAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS CAA 90 bp	GGCAATATTATGTATCCCATGAAAGGAAGTGGACATGGCAAAGTCTaGATCGAACTTCTTCCGGTCAGTTGGAGATGGCAGTGGTCTCTT	+
Preference number: 6 (lower is better) Translates to: GNIMYPMKGSGHGKV*IELLPVSWRWQWSL Trigger: AAGAGACCACTGCCATCTCCAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCTTTCATGGGATACATAATATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS TCA 72 bp	CCTAAGCCATCAAACTGTGGCTCCTTCTTTGGTGAGTaGATAACAAAGATGACACCAGCATCAGCAAAACCA	+
Preference number: 6 (lower is better) Translates to: PKPSNCGSFFGE*ITKMTPASAKP Trigger: TGGTTTTGCTGATGCTGGTGTCATCTTTGTTATTCACTCACCAAAGAAGGAGCCACAGTTTGATGGCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	GGGCAATATTATGTATCCCATGAAAGGAAGTGGACATaGCAAAGTCTTGATCGAACTTCTTCCGGTCAGTTG	+
Preference number: 6 (lower is better) Translates to: GQYYVSHERKWT*QSLDRTSSGQL Trigger: CAACTGACCGGAAGAAGTTCGATCAAGACTTTGCCATGTCCACTTCCTTTCATGGGATACATAATATTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS CAA 72 bp	ACTTCTTCCGGTCAGTTGGAGATGGCAGTGGTCTCTTaGAGAGGTAACGTTTTATCTTTCCTAAGAGTCCTT	+
Preference number: 6 (lower is better) Translates to: TSSGQLEMAVVS*RGNVLSFLRVL Trigger: AAGGACTCTTAGGAAAGATAAAACGTTACCTCTCAAAGAGACCACTGCCATCTCCAACTGACCGGAAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029641.10
CDS TCA 72 bp	TTGTTCTTGACAAACTCTGTAATGCTGAAGTTTTGGTaGTTCGTAACAAAATCTAAGGTCTCTGGAGAGCCA	+
Preference number: 6 (lower is better) Translates to: LFLTNSVMLKFW*FVTKSKVSGEP Trigger: TGGCTCTCCAGAGACCTTAGATTTTGTTACGAATCACCAAAACTTCAGCATTACAGAGTTTGTCAAGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CCA 72 bp	TTTTTCCACATACTGAACTTCTATAGATGTTGTCGTTaGCCATGTGAAGTAATTGACCAAACGACTGTAGAT	+
Preference number: 6 (lower is better) Translates to: FFHILNFYRCCR*PCEVIDQTTVD Trigger: ATCTACAGTCGTTTGGTCAATTACTTCACATGGCCAACGACAACATCTATAGAAGTTCAGTATGTGGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	AAAGTGAAGCAATTCCCATATTCAGTAAAGACGTGTTaGAAATCCTTTGGACTGCATGTTTTGCCAAAGAAC	+
Preference number: 6 (lower is better) Translates to: KVKQFPYSVKTC*KSFGLHVLPKN Trigger: GTTCTTTGGCAAAACATGCAGTCCAAAGGATTTCAAACACGTCTTTACTGAATATGGGAATTGCTTCACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2
CDS CAA 72 bp	TTGATTCAATTTCTTGGCAAGAAACCTTGTTGCTCTTaGACTTGGGAAAGTAGAATAAGAAACAGTAGCTGG	+
Preference number: 6 (lower is better) Translates to: LIQFLGKKPCCS*TWESRIRNSSW Trigger: CCAGCTACTGTTTCTTATTCTACTTTCCCAAGTCAAAGAGCAACAAGGTTTCTTGCCAAGAAATTGAATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029641.10 ENSMUST00000107736.2

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