Pregenerated sensors for ASIC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020704Ensembl transcript IDs: ENSMUST00000021045.13, ENSMUST00000066197.7
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGCTGGGCTCAGGGTGACTTTGGGTCTGCAACCTGGTCCCACTaGCTGGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCACGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: QSWAQGDFGSATWSH*LGSRVGSLRKPHGE Trigger: TTCTCCGTGCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAAGTCACCCTGAGCCCAGCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR TCA 90 bp | CAGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATaGGGGACACGAGGCTGGGCCCGGGACCGTTCGTGTCAGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: QVSSWTVPERDSSVL*GTRGWARDRSCQMW Trigger: CCACATCTGACACGAACGGTCCCGGGCCCAGCCTCGTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 90 bp | GCTGGGCTCAGGGTGACTTTGGGTCTGCAACCTGGTCCCACTGCCTaGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCACGGAGAAAATA | + |
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Preference number: 1 (lower is better) Translates to: AGLRVTLGLQPGPTA*VAEWAPSGNRTEKI Trigger: TATTTTCTCCGTGCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAAGTCACCCTGAGCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 90 bp | GTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACTaGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: VLPPQVLRKEGGGWY*SPLVQEPSGPVWGT Trigger: TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR TCA 90 bp | AACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCAGTTTTaGTTCCAGAGCTGGGCTCAGGGTGACTTTGGGTCTGCAACCTGG | + |
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Preference number: 1 (lower is better) Translates to: NVVESSVVSFLTVQF*FQSWAQGDFGSATW Trigger: CCAGGTTGCAGACCCAAAGTCACCCTGAGCCCAGCTCTGGAATCAAAACTGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 90 bp | AACAAAAATCAGACTCTACATCTGTGTCACAGGGAGAGAACAAAGTaGCTCCATGGACAAATACTGGGGTCACCCAGGCCACCGTACTTC | + |
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Preference number: 1 (lower is better) Translates to: NKNQTLHLCHRERTK*LHGQILGSPRPPYF Trigger: GAAGTACGGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGTGACACAGATGTAGAGTCTGATTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR GCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAGCAACCTGGTCCCACTaGCTGGGTAGCAGAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTATWSH*LGSRVG Trigger: GCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGC...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGAGTGCAGGAGCCCAGTaGGCCAGTTTGGGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRSAGAQ*ASLGDK Trigger: CTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACT...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | TACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGAGCTGGGCTCAGGGTaGCTTTGGGTCTGCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: YWSPLVQEPSGPVWGTRLELGSG*LWVCNL Trigger: CAGGTTGCAGACCCAAAGTCACCCTGAGCCCAGCTC...TAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACGCAACCTGGTCCCACTaGCTGGGTAGCAGAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QATVLPPQVLRKEGGGWYATWSH*LGSRVG Trigger: GCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGC...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGTTTGGGTCTGCAACCTaGTCCCACTGCCTGGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRFGSAT*SHCLGS Trigger: GCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAA...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACTCAGATGTGGCCAGGTaGGGTTTGGCAGAAGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: GAQWASLGDKARNLHEQHSDVAR*GLAEVR Trigger: GCGAACTTCTGCCAAACCTCACCTGGCCACATCTGA...GTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR GCA 90 bp | TTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGTGTCCTCAGGGGCTATaGCACCTGAGCTTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LVLVTFSAGAQWASLGDKCPQGL*HLSLLS Trigger: GGACAGCAAGCTCAGGTGGCATAGCCCCTGAGGACA...CTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGTCACCCAGGCCACCTCAGATGTGGCCAGGTaGGGTTTGGCAGAAGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: QGENKVAPWTNTGVTQATSDVAR*GLAEVR Trigger: GCGAACTTCTGCCAAACCTCACCTGGCCACATCTGA...GGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR GCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACTGTCCTCAGGGGCTATaGCACCTGAGCTTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RLVLGQFRSATHRSYEGHCPQGL*HLSLLS Trigger: GGACAGCAAGCTCAGGTGGCATAGCCCCTGAGGACA...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACCCCTGTCCTGGGTCTTaGGCCTTTAAGGTCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GAQWASLGDKARNLHEQHPCPGS*AFKVCL Trigger: CAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGG...GTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTCTGGCAGTGAGATGTaGTGGCAGGTTAGTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRSGSEM*WQVSSW Trigger: CCAAGAACTAACCTGCCATCACATCTCACTGCCAGA...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGATTGACAGTGCAGTTTTaGTTCCAGAGCTGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GVTQATVLPPQVLRKEGGLTVQF*FQSWAQ Trigger: CTGAGCCCAGCTCTGGAATCAAAACTGCACTGTCAA...TCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGTCACCCAGGCCACCTTGACAGTGCAGTTTTaGTTCCAGAGCTGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QGENKVAPWTNTGVTQATLTVQF*FQSWAQ Trigger: CTGAGCCCAGCTCTGGAATCAAAACTGCACTGTCAA...GGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGCCAGGTGAGGTTTaGCAGAAGTTCGCAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: VTQATVLPPQVLRKEGGGWPGEV*QKFAMC Trigger: ACACATTGCGAACTTCTGCCAAACCTCACCTGGCCA...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CAA 90 bp | AGGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTaGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAA | + |
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Preference number: 2 (lower is better) Translates to: RLVLVTFSAGAQWAS*GDKARNLHEQHKDQ Trigger: TTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR TCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGTCTGGCAGTGAGATGTaGTGGCAGGTTAGTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: HVQDASGGGAVRSLSMQVSGSEM*WQVSSW Trigger: CCAAGAACTAACCTGCCATCACATCTCACTGCCAGA...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCAGCCTGGGTAGCAGAGTaGGCTCCCTCCGGAAACCGC | + |
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Preference number: 2 (lower is better) Translates to: NTRIKRCREFCGFLLDSAAWVAE*APSGNR Trigger: GCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGC...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCTGGCCAGGTGAGGTTTaGCAGAAGTTCGCAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: TRLGTFTNNTRIKRCREFWPGEV*QKFAMC Trigger: ACACATTGCGAACTTCTGCCAAACCTCACCTGGCCA...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR TCA 72 bp | TCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATaGGGGACACGAGGCTGGGCCCGGGACCGTTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: SWTVPERDSSVL*GTRGWARDRSC Trigger: ACACGAACGGTCCCGGGCCCAGCCTCGTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR GCA 72 bp | GCTCAGGGTGACTTTGGGTCTGCAACCTGGTCCCACTaGCTGGGTAGCAGAGTGGGCTCCCTCCGGAAACCG | + |
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Preference number: 3 (lower is better) Translates to: AQGDFGSATWSH*LGSRVGSLRKP Trigger: CGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAAGTCACCCTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | AGGGTGACTTTGGGTCTGCAACCTGGTCCCACTGCCTaGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCACG | + |
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Preference number: 3 (lower is better) Translates to: RVTLGLQPGPTA*VAEWAPSGNRT Trigger: CGTGCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAAGTCACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | CAGAGCTGGGCTCAGGGTGACTTTGGGTCTGCAACCTaGTCCCACTGCCTGGGTAGCAGAGTGGGCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QSWAQGDFGSAT*SHCLGSRVGSL Trigger: GAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAGACCCAAAGTCACCCTGAGCCCAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CAA 90 bp | TACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGCCTTTAAGGTCTGTTaGGAGGTGCTGGGCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: YWSPLVQEPSGPVWGTRLAFKVC*EVLGCL Trigger: CAGGCAGCCCAGCACCTCCAAACAGACCTTAAAGGC...TAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | TGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTaGGGGACAAGGCTAGGAACCTTCACGAACAACACA | + |
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Preference number: 3 (lower is better) Translates to: WSPLVQEPSGPV*GTRLGTFTNNT Trigger: TGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | CCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACTaGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: PQVLRKEGGGWY*SPLVQEPSGPV Trigger: AACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | CTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTaGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LPPQVLRKEGGG*YWSPLVQEPSG Trigger: CCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | ACAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTaGGGTCACCCAGGCCACCGTACTTCCTCCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: TGREQSGSMDKY*GHPGHRTSSTG Trigger: ACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | ACATCTGTGTCACAGGGAGAGAACAAAGTGGCTCCATaGACAAATACTGGGGTCACCCAGGCCACCGTACTT | + |
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Preference number: 3 (lower is better) Translates to: TSVSQGENKVAP*TNTGVTQATVL Trigger: AAGTACGGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGTGACACAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR CCA 72 bp | CAGACTCTACATCTGTGTCACAGGGAGAGAACAAAGTaGCTCCATGGACAAATACTGGGGTCACCCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QTLHLCHRERTK*LHGQILGSPRP Trigger: TGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGTGACACAGATGTAGAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| 3UTR-3UTR CAA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCGCCTTTAAGGTCTGTTaGGAGGTGCTGGGCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TRLGTFTNNTRIKRCREFAFKVC*EVLGCL Trigger: CAGGCAGCCCAGCACCTCCAAACAGACCTTAAAGGC...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | GGGGCTATGCCACCTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGCACAGCGCCCGCCGCTaGAAAGAGCCTCCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GAMPPELAVPCPGSWAFKHSARR*KEPPAA Trigger: GGCGGCGGGAGGCTCTTTCCAGCGGCGGGCGCTGTG...CTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CCA 90 bp | GGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGACCTGCGGGCGACCCCTaGCCCCTGCAGCTCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: GVTQATVLPPQVLRKEGGPAGDP*PLQLPI Trigger: GATCGGGAGCTGCAGGGGCCAGGGGTCGCCCGCAGG...TCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCGGGCCTCCAGCACGGTaGGGTCCGCCAGATGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGGPPAR*GPPDAG Trigger: ACCCGCATCTGGCGGACCCCACCGTGCTGGAGGCCC...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | CAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGTCACCCAGGCCACCGCGACCCCTGGCCCCTaGAGCTCCCGATCGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: QGENKVAPWTNTGVTQATATPGP*SSRSPL Trigger: GAGCGGCGATCGGGAGCTGCAGGGGCCAGGGGTCGC...GGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGGGCGCGCGGTGCGGTTaGGCAGCAGCAGTCCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRGARCG*AAAVLA Trigger: GGCTAGGACTGCTGCTGCCCAACCGCACCGCGCGCC...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR GCA 90 bp | CTGCAACCTGGTCCCACTGCCTGGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCGCACACTCCTTGTGCTaGTCAGGGGTGCAGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LQPGPTAWVAEWAPSGNRAHSLC*SGVQKG Trigger: CCCTTTCTGCACCCCTGAGCAGCACAAGGAGTGTGC...GCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACGCGGGGAACGGCAGCTaGCGGCTCCACTCGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYAGNGS*RLHSRC Trigger: GCACCGCGAGTGGAGCCGCCAGCTGCCGTTCCCCGC...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCCTGATGCCCTCGAAGTaGCGCGGCGGCAGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGLMPSK*RGGRKR Trigger: CCTCTTCCTGCCGCCGCGCCACTTCGAGGGCATCAG...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR GCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCGCCGAGGGCTGGCTCTaGACACTCCTTGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGAEGWL*TLLVLL Trigger: GAGCAGCACAAGGAGTGTGCAGAGCCAGCCCTCGGC...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACCGGCTCCACTCGCGGTaGACTCGCGTGTGTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYRLHSR*TRVCDG Trigger: CCCGTCACACACGCGAGTGCACCGCGAGTGGAGCCG...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCACTGAGGAGAAGTTGTaGGGGCCACAGAGCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGTEEKL*GPQSSP Trigger: GGGCGAGCTCTGTGGCCCGCACAACTTCTCCTCAGT...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCTCCCACGAAGGCCACTaGCCAAAGCACACGCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGSHEGH*PKHTPD Trigger: ATCCGGCGTGTGCTTTGGGCAGTGGCCTTCGTGGGA...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGAGTAGAGGTCCCCCTTaGAGAGGCGCGGGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRSRGPP*RGAGSA Trigger: TGCGCTTCCCGCGCCTCTCCAAGGGGGACCTCTACT...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAGCAGAGGGTCACAGCTaGGAAGACCAGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTAEGHS*EDQALG Trigger: GCCCAGAGCCTGGTCTTCCCAGCTGTGACCCTCTGC...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR TCA 90 bp | GGGGCTATGCCACCTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGACTGTGGTGAAGTCTTaGTGCCCACACTCCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAMPPELAVPCPGSWAFKTVVKS*CPHSCP Trigger: GGGGCAGGAGTGTGGGCATCAAGACTTCACCACAGT...CTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCGCACACTCCTTGTGCTaGTCAGGGGTGCAGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGAHSLC*SGVQKG Trigger: CCCTTTCTGCACCCCTGAGCAGCACAAGGAGTGTGC...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGTCACCCAGGCCACCGCCGAGGGCTGGCTCTaGACACTCCTTGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGENKVAPWTNTGVTQATAEGWL*TLLVLL Trigger: GAGCAGCACAAGGAGTGTGCAGAGCCAGCCCTCGGC...GGTGGCCTGGGTGACCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCTGGTCCCACTGCCTGGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCCTCTTGGATGAAAGGTaGCTCAGACTGGCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPGPTAWVAEWAPSGNRLLDER*LRLAVD Trigger: ATCCACAGCCAGTCTGAGCCACCTTTCATCCAAGAG...GCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACGTGGCCACGAAGGTCTaGAACCCCGGAGCCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHVATKV*NPGATP Trigger: TGGGGTGGCTCCGGGGTTCCAGACCTTCGTGGCCAC...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGGTGGCCACGAAGGTCTaGAACCCCGGAGCCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVVATKV*NPGATP Trigger: TGGGGTGGCTCCGGGGTTCCAGACCTTCGTGGCCAC...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGCTGGGCATGTGCCGCAGCCCGTaGAATTTAGTGCGACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPCPGSWAFKVCLEVLGMCRSP*NLVRLR Trigger: CCTGAGTCGCACTAAATTGCACGGGCTGCGGCACAT...GCCCAGCACCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACCGCCCCGCGCACATGTaGCGCAGCCCGTGCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHRPAHM*RSPCNL Trigger: TAAATTGCACGGGCTGCGGCACATGTGCGCGGGGCG...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAGTGCCCAAAGCTGTCTaGAGGGGCACGTTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTVPKAV*RGTFTV Trigger: CACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCAC...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGCAATCTCCTCCAGGGTaGCCAAAGCTGTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRQSPPG*PKLSAG Trigger: CCCTGCAGACAGCTTTGGGCACCCTGGAGGAGATTG...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGTGGATGCTGGAAGGTTaGAGGCTGCCCTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVWMLEG*RLPSLG Trigger: CCCCAGCGAGGGCAGCCTGCAACCTTCCAGCATCCA...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGAGCATGTCCTCCAGCTaGTGGCCCAGACGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSPVLGLGPLRSVWRSMSSS*WPRRSM Trigger: CATGGACCGTCTGGGCCACCAGCTGGAGGACATGCT...CCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR CCA 90 bp | GGGGCTATGCCACCTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGGCACGTTCACAGTGTaGCTGATGGTTTCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAMPPELAVPCPGSWAFKGTFTV*LMVSEW Trigger: CCACTCCGAAACCATCAGCCACACTGTGAACGTGCC...CTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR TCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGAACCGGAAGCCATTaGGGTTGCAGAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTRTGSH*GCRGSQ Trigger: CTGTGACCCTCTGCAACCTCAATGGCTTCCGGTTCT...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGGCAAGCCAAGGGACGTaGAGAAGGCCAGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVASQGT*RRPAPT Trigger: TGTGGGTGCTGGCCTTCTGCACGTCCCTTGGCTTGC...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGGCTCGCCCCGGTACTTaGAGGAGAGCAGCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVARPGT*RRAACP Trigger: AGGACATGCTGCTCTCCTGCAAGTACCGGGGCGAGC...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGTGTAGCGGGTCAGGTTaGAGGGTGTCCTGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSPVLGLGPLRSVWRCSGSG*RVSCRD Trigger: GTCTCTGCAGGACACCCTGCAACCTGACCCGCTACA...CCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTGTGCCCAAAGCTGTCTaGAGGGGCACGTTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTQATVLPPQVLRKEGGGVPKAV*RGTFTV Trigger: CACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCAC...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCTGGTCCCACTGCCTGGGTAGCAGAGTGGGCTCCCTCCGGAAACCGCCTCATGTTCTCATCATaGCTCCCTTCCTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPGPTAWVAEWAPSGNRLMFSS*LPSSSS Trigger: AGAAGAAGAGGAAGGGAGCCATGATGAGAACATGAG...GCGGTTTCCGGAGGGAGCCCACTCTGCTACCCAGGCAGTGGGACCAGGTTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGATGTGGCGGATGCCATaGAGAGTAGAGGTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRMWRMP*RVEVLA Trigger: CGCCAACACCTCTACTCTCCATGGCATCCGCCACAT...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| 3UTR CAA 72 bp | GCTTCTTTCTGTCCTCAGGGGCTATGCCACCTGAGCTaGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFCPQGLCHLS*LSPVLGLGPLR Trigger: CCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCCTGAGGACAGAAAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR TCA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGCGTTCACAGTGTGGCTaGTGGTTTCGGAGTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRRSQCG*WFRSGL Trigger: CAAACCACTCCGAAACCATCAGCCACACTGTGAACG...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCCCAGCGGGCGCGCGGTaGGGTTGGGCAGCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFPAGAR*GWAAAV Trigger: GACTGCTGCTGCCCAACCGCACCGCGCGCCCGCTGG...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR GCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGTGTAGCGGGTCAGGTTaGAGGGTGTCCTGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVCSGSG*RVSCRD Trigger: GTCTCTGCAGGACACCCTGCAACCTGACCCGCTACA...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACCAATCTCCTCCAGGGTaGCCAAAGCTGTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHQSPPG*PKLSAG Trigger: CCCTGCAGACAGCTTTGGGCACCCTGGAGGAGATTG...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | TGGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAATGGAAGGTTGCAGGCTaGCCTCGCTGGGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WASLGDKARNLHEQHKDQWKVAG*PRWGSP Trigger: AGGAGAGCCCCAGCGAGGGCAGCCTGCAACCTTCCA...TTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACTCATGGCCTACCCGGTaGAGGAACTCCAGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYSWPTR*RNSSML Trigger: CAGCATGCTGGAGTTCCTGCACCGGGTAGGCCATGA...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACATGTCCTCCAGCTGGTaGCCCAGACGGTCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHMSSSW*PRRSMK Trigger: CTTCATGGACCGTCTGGGCCACCAGCTGGAGGACAT...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR CCA 90 bp | GGGGCTATGCCACCTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGTGGCTGACGTCTTGCTaGGGATCTTTACCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAMPPELAVPCPGSWAFKWLTSC*GSLPWR Trigger: TCTCCATGGTAAAGATCCCCAGCAAGACGTCAGCCA...CTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGGGCACGTTCACAGTGTaGCTGATGGTTTCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSPVLGLGPLRSVWRGTFTV*LMVSEW Trigger: CCACTCCGAAACCATCAGCCACACTGTGAACGTGCC...CCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGATATCCTTCAGGTCATaGCCTACCCGGTGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRISFRS*PTRCRN Trigger: GTTCCTGCACCGGGTAGGCCATGACCTGAAGGATAT...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| 3UTR CAA 72 bp | CTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTaGGGGGACAAGGCTAGGAACCTTCACGAACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVTFSAGAQWAS*GDKARNLHEQH Trigger: GTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR TCA 90 bp | TACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGACTGGCTGTGGATCTaGACCTTCACTCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YWSPLVQEPSGPVWGTRLDWLWI*TFTPAS Trigger: TGAAGCAGGAGTGAAGGTTCAGATCCACAGCCAGTC...TAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGATATGTGAGCCTCTaGTCTTGTGTGGCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRRYVSL*SCVATK Trigger: CTTCGTGGCCACACAAGAGCAGAGGCTCACATATCT...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACACTCTTGGATGAAAGGTaGCTCAGACTGGCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTLLDER*LRLAVD Trigger: ATCCACAGCCAGTCTGAGCCACCTTTCATCCAAGAG...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGTCTTCTCCAGGTACTTaGCTGACGTCTTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVTFSAGAQWASLGDKSSPGT*LTSCWG Trigger: TCCCCAGCAAGACGTCAGCCAAGTACCTGGAGAAGA...CTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACACTGATGGTTTCGGAGTaGTTTGGCATTGTGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTLMVSE*FGIVSQ Trigger: CTGCGACACAATGCCAAACCACTCCGAAACCATCAG...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAATGTGTGACGGGAAACTaGGCCAGTAGAGCAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPVWGTRLGTFTNNTRIKCVTGN*ASRAGG Trigger: ACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACA...TTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAAGTGCACTCGCGTGTGTaGCGGGAAACTGAGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPVWGTRLGTFTNNTRIKVHSRV*RETEPV Trigger: TACTGGCTCAGTTTCCCGTCACACACGCGAGTGCAC...TTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR TCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACCGTTCACAGTGTGGCTaGTGGTTTCGGAGTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYRSQCG*WFRSGL Trigger: CAAACCACTCCGAAACCATCAGCCACACTGTGAACG...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACCAGGAATCTGCAAGTTaGCATCCAACAGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYQESAS*HPTGPA Trigger: TGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTG...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACATCGGTTTGTAGTGTTTaGAGTTGGCCTTCTGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTSVCSV*SWPSVG Trigger: TCCGACAGAAGGCCAACTTCAAACACTACAAACCGA...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | TACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGGAACTCCAGCATGCTaGACTGCTTCGGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YWSPLVQEPSGPVWGTRLGTPAC*TASVCS Trigger: ACTACAAACCGAAGCAGTTCAGCATGCTGGAGTTCC...TAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTAGATATGTGAGCCTCTaGTCTTGTGTGGCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTQATVLPPQVLRKEGGGRYVSL*SCVATK Trigger: CTTCGTGGCCACACAAGAGCAGAGGCTCACATATCT...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACTCTTCTCCAGGTACTTaGCTGACGTCTTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYSSPGT*LTSCWG Trigger: TCCCCAGCAAGACGTCAGCCAAGTACCTGGAGAAGA...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACGTGTTGGCGAAGATCTaGATGCTGGAAGGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYVLAKI*MLEGCR Trigger: CCTGCAACCTTCCAGCATCCAGATCTTCGCCAACAC...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| 3UTR CAA 72 bp | ACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTaGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSTGAEKRRRR*VLVTFSAGAQW Trigger: CCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACCGATCCGACAGGCTGTaGTGCTGTAAACAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHRSDRL*CCKQER Trigger: TCTTTCCTGTTTACAGCATCACAGCCTGTCGGATCG...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGCGATCCGACAGGCTGTaGTGCTGTAAACAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVRSDRL*CCKQER Trigger: TCTTTCCTGTTTACAGCATCACAGCCTGTCGGATCG...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCATGCGGAACCACTGTCTaGGCGGCTCGTCGCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTRIKRCREFCGFLLDSACGTTV*AARRPA Trigger: TGCGGGGCGACGAGCCGCGCAGACAGTGGTTCCGCA...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CCA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGTGGGGATCTTTACCATaGAGAGCTCTTTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRWGSLP*RALCCS Trigger: GCTACAACAAAGAGCTCTCCATGGTAAAGATCCCCA...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | CAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTGGTACCTGAACCTTCACTCCTaGTTCAAACGTTGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QATVLPPQVLRKEGGGWYLNLHS*FKRCFL Trigger: GAGGAAACAACGTTTGAAGCAGGAGTGAAGGTTCAG...GTACCAACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | TTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGTGCAGAGACAGTAATTaGTGTCCTTTTCTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVTFSAGAQWASLGDKCRDSN*CPFLPV Trigger: TACTGGCAGAAAAGGACAGCAATTACTGTCTCTGCA...CTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | TGGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAGGTTGCAGGGTGTCCTaGAGAGACAGTAATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WASLGDKARNLHEQHKDQGCRVS*RDSNCC Trigger: ACAGCAATTACTGTCTCTGCAGGACACCCTGCAACC...TTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGTGGGGATCTTTACCATaGAGAGCTCTTTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVQDASGGGAVRSLSMQVWGSLP*RALCCS Trigger: GCTACAACAAAGAGCTCTCCATGGTAAAGATCCCCA...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | AGGTTAGTTCTTGGACAGTTCCGGAGCGCGACTCATCGGTCCTATGAGGGACACCTTCCTCTTCTTCTTTaGCAAGCAGGTCTAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGQFRSATHRSYEGHLPLLL*QAGLIA Trigger: AGCTATTAGACCTGCTTGGCAAAGAAGAAGAGGAAG...GTGTCCCTCATAGGACCGATGAGTCGCGCTCCGGAACTGTCCAAGAACTAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCAAAGCACACGCCGGATaGTCAGCGGCCCATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFKAHAG*SAAHTR Trigger: TCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTTT...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCTGGCGAAGATCTGGATaGTGGAAGGTTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFWRRSG*WKVAGC Trigger: GCAGCCTGCAACCTTCCAGCATCCAGATCTTCGCCA...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | CTACATCTGTGTCACAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGCTTGCCATCCTCGCCTaGGTTAAACATGTAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLCHRERTKWLHGQILGLAILA*VKHVTL Trigger: AAGTGTTACATGTTTAACTCAGGCGAGGATGGCAAG...CCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGTGACACAGATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCCACACTCCTGCCCCTTaGACTTGCAGTAGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFHTPAP*TCSRAS Trigger: TGATGCTCTACTGCAAGTTCAAGGGGCAGGAGTGTG...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | CTACATCTGTGTCACAGGGAGAGAACAAAGTGGCTCCATGGACAAATACTGGGGCTTCCTCTTCTTCTTTaGCAAGCAGGTCTAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLCHRERTKWLHGQILGLPLLL*QAGLIA Trigger: AGCTATTAGACCTGCTTGGCAAAGAAGAAGAGGAAG...CCCCAGTATTTGTCCATGGAGCCACTTTGTTCTCTCCCTGTGACACAGATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCCTGATGGTTTCGGAGTaGTTTGGCATTGTGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFLMVSE*FGIVSQ Trigger: CTGCGACACAATGCCAAACCACTCCGAAACCATCAG...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | AAACCCAAACCGAACCTTAGAACATCAAAAACCAAAGACCGTAAGACGAAGCAACGAAGATCTGGATGCTaGAAGGTTGCAGGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPKPNLRTSKTKDRKTKQRRSGC*KVAGCP Trigger: AGGGCAGCCTGCAACCTTCCAGCATCCAGATCTTCG...TTGCTTCGTCTTACGGTCTTTGGTTTTTGATGTTCTAAGGTTCGGTTTGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | GGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAAGGTAACATGCTGATATaGGAAATAGTAGGATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVWGTRLGTFTNNTRIKGNMLI*EIVGYS Trigger: AGAGTATCCTACTATTTCTCATATCAGCATGTTACC...TTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCAGGTTGCAGGGTGTCCTaGAGAGACAGTAATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTRIKRCREFCGFLLDSAGCRVS*RDSNCC Trigger: ACAGCAATTACTGTCTCTGCAGGACACCCTGCAACC...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR TCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCCTTGCCATCCTCGCCTaGGTTAAACATGTAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFLAILA*VKHVTL Trigger: AAGTGTTACATGTTTAACTCAGGCGAGGATGGCAAG...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | ACAAGGCTAGGAACCTTCACGAACAACACAAGGATCAAACGTTGTAGAGAGTTCCTGAACCTTCACTCCTaGTTCAAACGTTGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTFTNNTRIKRCREFLNLHS*FKRCFL Trigger: GAGGAAACAACGTTTGAAGCAGGAGTGAAGGTTCAG...GAACTCTCTACAACGTTTGATCCTTGTGTTGTTCGTGAAGGTTCCTAGCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | AAACCCAAACCGAACCTTAGAACATCAAAAACCAAAGACCGTAAGACGAAGCAATGGCTGACGTCTTGCTaGGGATCTTTACCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPKPNLRTSKTKDRKTKQWLTSC*GSLPWR Trigger: TCTCCATGGTAAAGATCCCCAGCAAGACGTCAGCCA...TTGCTTCGTCTTACGGTCTTTGGTTTTTGATGTTCTAAGGTTCGGTTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | AAACCCAAACCGAACCTTAGAACATCAAAAACCAAAGACCGTAAGACGAAGCAACCATACACGAAGATGTaGCGGATGCCATGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPKPNLRTSKTKDRKTKQPYTKM*RMPWRV Trigger: TACTCTCCATGGCATCCGCCACATCTTCGTGTATGG...TTGCTTCGTCTTACGGTCTTTGGTTTTTGATGTTCTAAGGTTCGGTTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR CCA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCACTCATGTTCTCATCATaGCTCCCTTCCTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTRIKRCREFCGFLLDSALMFSS*LPSSSS Trigger: AGAAGAAGAGGAAGGGAGCCATGATGAGAACATGAG...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR GCA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCATGCAGAGACAGTAATTaGTGTCCTTTTCTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTRIKRCREFCGFLLDSACRDSN*CPFLPV Trigger: TACTGGCAGAAAAGGACAGCAATTACTGTCTCTGCA...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS GCA 90 bp | GAGCCTCCCGCCGCCGTGCGCCCCGCGCACATGTGCCGCAGCCCGTaGAATTTAGTGCGACTCAGGGACGGCCGCCCCCTGCGGGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: EPPAAVRPAHMCRSP*NLVRLRDGRPLRAT Trigger: GGTCGCCCGCAGGGGGCGGCCGTCCCTGAGTCGCACTAAATTGCACGGGCTGCGGCACATGTGCGCGGGGCGCACGGCGGCGGGAGGCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS TCA 90 bp | TGCGGAACCACTGTCTGCGCGGCTCGTCGCCCCGCAGCAGCTCGCTaGCCAGCGGGCGCGCGGTGCGGTTGGGCAGCAGCAGTCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGTTVCAARRPAAAR*PAGARCGWAAAVLA Trigger: GGCTAGGACTGCTGCTGCCCAACCGCACCGCGCGCCCGCTGGTCAGCGAGCTGCTGCGGGGCGACGAGCCGCGCAGACAGTGGTTCCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 90 bp | CGCCGCTGGAAAGAGCCTCCCGCCGCCGTGCGCCCCGCGCACATGTaGCGCAGCCCGTGCAATTTAGTGCGACTCAGGGACGGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRWKEPPAAVRPAHM*RSPCNLVRLRDGRP Trigger: GGGGCGGCCGTCCCTGAGTCGCACTAAATTGCACGGGCTGCGGCACATGTGCGCGGGGCGCACGGCGGCGGGAGGCTCTTTCCAGCGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CCA 90 bp | AAGCCAAGGGACGTGCAGAAGGCCAGCACCCACAGCGCCCGCCGCTaGAAAGAGCCTCCCGCCGCCGTGCGCCCCGCGCACATGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KPRDVQKASTHSARR*KEPPAAVRPAHMCR Trigger: GCGGCACATGTGCGCGGGGCGCACGGCGGCGGGAGGCTCTTTCCAGCGGCGGGCGCTGTGGGTGCTGGCCTTCTGCACGTCCCTTGGCTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 90 bp | CCTCGAAGTGGCGCGGCGGCAGGAAGAGGCGGAAGTCGGCCAGCTTaGGGAACCACTGTCTGCGCGGCTCGTCGCCCCGCAGCAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSGAAAGRGGSRPA*GTTVCAARRPAAAR Trigger: GCGAGCTGCTGCGGGGCGACGAGCCGCGCAGACAGTGGTTCCGCAAGCTGGCCGACTTCCGCCTCTTCCTGCCGCCGCGCCACTTCGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS TCA 90 bp | CCTTGGAGAGGCGCGGGAAGCGCAGGGGGTTGTTGTTGCACACGGTaGCAGCGGGGAACGGCAGCTGGCGGCTCCACTCGCGGTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PWRGAGSAGGCCCTR*QRGTAAGGSTRGAL Trigger: GAGTGCACCGCGAGTGGAGCCGCCAGCTGCCGTTCCCCGCTGTCACCGTGTGCAACAACAACCCCCTGCGCTTCCCGCGCCTCTCCAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CCA 90 bp | TGGTGGCCCAGACGGTCCATGAAGGCAGCGCTGATGCCCTCGAAGTaGCGCGGCGGCAGGAAGAGGCGGAAGTCGGCCAGCTTGCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WWPRRSMKAALMPSK*RGGRKRRKSASLRN Trigger: GTTCCGCAAGCTGGCCGACTTCCGCCTCTTCCTGCCGCCGCGCCACTTCGAGGGCATCAGCGCTGCCTTCATGGACCGTCTGGGCCACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS TCA 90 bp | GGGGAACGGCAGCTGGCGGCTCCACTCGCGGTGCACTCGCGTGTGTaGCGGGAAACTGAGCCAGTAGAGCAGGCGGTTCGAGGACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GERQLAAPLAVHSRV*RETEPVEQAVRGPG Trigger: TCCTGGTCCTCGAACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACACGCGAGTGCACCGCGAGTGGAGCCGCCAGCTGCCGTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS CCA 90 bp | CGCAGGGGGTTGTTGTTGCACACGGTGACAGCGGGGAACGGCAGCTaGCGGCTCCACTCGCGGTGCACTCGCGTGTGTGACGGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGLLLHTVTAGNGS*RLHSRCTRVCDGKL Trigger: CAGTTTCCCGTCACACACGCGAGTGCACCGCGAGTGGAGCCGCCAGCTGCCGTTCCCCGCTGTCACCGTGTGCAACAACAACCCCCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS GCA 90 bp | AGAGCAGGCGGTTCGAGGACCAGGACAACAGCAAGCCAAGGGACGTaGAGAAGGCCAGCACCCACAGCGCCCGCCGCTGGAAAGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGSRTRTTASQGT*RRPAPTAPAAGKSL Trigger: GAGGCTCTTTCCAGCGGCGGGCGCTGTGGGTGCTGGCCTTCTGCACGTCCCTTGGCTTGCTGTTGTCCTGGTCCTCGAACCGCCTGCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS TCA 90 bp | GCTGGCGGCTCCACTCGCGGTGCACTCGCGTGTGTGACGGGAAACTaGGCCAGTAGAGCAGGCGGTTCGAGGACCAGGACAACAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGSTRGALACVTGN*ASRAGGSRTRTTAS Trigger: GCTTGCTGTTGTCCTGGTCCTCGAACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACACGCGAGTGCACCGCGAGTGGAGCCGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 90 bp | CGAGCTCTCCACCAGCAGCAGGCCCAGAGATCCCACGAAGGCCACTaGCCAAAGCACACGCCGGATGGTCAGCGGCCCATACACGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RALHQQQAQRSHEGH*PKHTPDGQRPIHED Trigger: ATCTTCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTTTGGGCAGTGGCCTTCGTGGGATCTCTGGGCCTGCTGCTGGTGGAGAGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 90 bp | AGGGCCTCCAGCACGGTGGGGTCCGCCAGATGCGGGTCAGGAATCTaGAAGTTGACATCCAACAGGGCCAGCAACTCCCCAGCGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RASSTVGSARCGSGI*KLTSNRASNSPAWY Trigger: GTACCACGCTGGGGAGTTGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCACCGTGCTGGAGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS CCA 90 bp | GGCCCAGAGATCCCACGAAGGCCACTGCCCAAAGCACACGCCGGATaGTCAGCGGCCCATACACGAAGATGTGGCGGATGCCATGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPEIPRRPLPKAHAG*SAAHTRRCGGCHGE Trigger: CTCTCCATGGCATCCGCCACATCTTCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTTTGGGCAGTGGCCTTCGTGGGATCTCTGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 90 bp | TTGGCCTTCTGTCGGAGGGCCTCCAGCACGGTGGGGTCCGCCAGATaGGGGTCAGGAATCTGCAAGTTGACATCCAACAGGGCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFCRRASSTVGSAR*GSGICKLTSNRASN Trigger: GTTGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCACCGTGCTGGAGGCCCTCCGACAGAAGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGACGGAAGTCGGCCAGCTaGCGGAACCACTGTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTQATVLPPQVLRKEGGRKSAS*RNHCLR Trigger: GCGCAGACAGTGGTTCCGCAAGCTGGCCGACTTCCG...TCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CAA 90 bp | GGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTAGGAACCTTCACGAACAACACGGGAAGCGCAGGGGGTaGTTGTTGCACACGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GAQWASLGDKARNLHEQHGKRRG*LLHTVT Trigger: TGTCACCGTGTGCAACAACAACCCCCTGCGCTTCCC...GTGTTGTTCGTGAAGGTTCCTAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS-3UTR CAA 90 bp | GGGGCTATGCCACCTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGCACTGTGGTGAAGTCTaGATGCCCACACTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAMPPELAVPCPGSWAFKHCGEV*MPTLLP Trigger: GGGCAGGAGTGTGGGCATCAAGACTTCACCACAGTG...CTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAGGTGGCATAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS CCA 90 bp | TCCTCCAGGGTGCCCAAAGCTGTCTGCAGGGGCACGTTCACAGTGTaGCTGATGGTTTCGGAGTGGTTTGGCATTGTGTCGCAGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRVPKAVCRGTFTV*LMVSEWFGIVSQVL Trigger: GAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCACCCTGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GGTTGGTACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAGTGGTGAGCAGAGGCTaGCCATCCTCGCCTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GWYWSPLVQEPSGPVWGTVVSRG*PSSPEL Trigger: TAACTCAGGCGAGGATGGCAAGCCTCTGCTCACCAC...TGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTACCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS TCA 90 bp | CCAGGGTGCCCAAAGCTGTCTGCAGGGGCACGTTCACAGTGTGGCTaGTGGTTTCGGAGTGGTTTGGCATTGTGTCGCAGGTGCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PGCPKLSAGARSQCG*WFRSGLALCRRCSC Trigger: ACATGAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTGGTTTCGGAGTGGTTaGGCATTGTGTCGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GHPGHRTSSTGAEKRRRRWFRSG*ALCRRC Trigger: GCACCTGCGACACAATGCCAAACCACTCCGAAACCA...CCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | TACTGGTCACCTTTAGTGCAGGAGCCCAGTGGGCCAGTTTGGGGGACAAGGCTATTCTTCTCCAGGTACTaGGCTGACGTCTTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YWSPLVQEPSGPVWGTRLFFSRY*ADVLLG Trigger: CCCCAGCAAGACGTCAGCCAAGTACCTGGAGAAGAA...TAGCCTTGTCCCCCAAACTGGCCCACTGGGCTCCTGCACTAAAGGTGACCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTTTCTTCTCCAGGTACTaGGCTGACGTCTTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTQATVLPPQVLRKEGGGFFSRY*ADVLLG Trigger: CCCCAGCAAGACGTCAGCCAAGTACCTGGAGAAGAA...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | CTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGCGGAGTGGTTTGGCATaGTGTCGCAGGTGCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSPVLGLGPLRSVWRRSGLA*CRRCSC Trigger: ACATGAGCACCTGCGACACAATGCCAAACCACTCCG...CCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | TGGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGTCAGGAATCTGCAAGTaGACATCCAACAGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGHPGHRTSSTGAEKRRRSGICK*TSNRAS Trigger: GCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGA...CCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 90 bp | TGTTGTAGCGGGTCAGGTTGCAGGGTGTCCTGCAGAGACAGTAATTaGTGTCCTTTTCTGCCAGTAAGCCGAGGGCTGGCTCTGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: CCSGSGCRVSCRDSN*CPFLPVSRGLALHT Trigger: AGTGTGCAGAGCCAGCCCTCGGCTTACTGGCAGAAAAGGACAGCAATTACTGTCTCTGCAGGACACCCTGCAACCTGACCCGCTACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 90 bp | CTGCAGGGGCACGTTCACAGTGTGGCTGATGGTTTCGGAGTGGTTTaGCATTGTGTCGCAGGTGCTCATGTTCTCATCATGGCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQGHVHSVADGFGVV*HCVAGAHVLIMAPF Trigger: GAAGGGAGCCATGATGAGAACATGAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 90 bp | GCTGTCTGCAGGGGCACGTTCACAGTGTGGCTGATGGTTTCGGAGTaGTTTGGCATTGTGTCGCAGGTGCTCATGTTCTCATCATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVCRGTFTVWLMVSE*FGIVSQVLMFSSWL Trigger: GAGCCATGATGAGAACATGAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | CTGAGCTTGCTGTCCCCTGTCCTGGGTCTTGGGCCTTTAAGGTCTGTTTGGAGGCTCCTGCTTCAAACGTaGTTTCCTCTGTCTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSPVLGLGPLRSVWRLLLQT*FPLSLP Trigger: GGGGAGAGACAGAGGAAACAACGTTTGAAGCAGGAG...CCTCCAAACAGACCTTAAAGGCCCAAGACCCAGGACAGGGGACAGCAAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | CATGTACAAGACGCAAGTGGAGGCGGCGCTGTAAGAAGTCTGAGCATGCAGGTGCGGAGTGGTTTGGCATaGTGTCGCAGGTGCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HVQDASGGGAVRSLSMQVRSGLA*CRRCSC Trigger: ACATGAGCACCTGCGACACAATGCCAAACCACTCCG...CACCTGCATGCTCAGACTTCTTACAGCGCCGCCTCCACTTGCGTCTTGTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGACCTTCCTCTTCTTCTTaGCCAAGCAGGTCTAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTQATVLPPQVLRKEGGPSSSS*PSRSNS Trigger: GCTATTAGACCTGCTTGGCAAAGAAGAAGAGGAAGG...TCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTCCTTCCTCTTCTTCTTaGCCAAGCAGGTCTAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTQATVLPPQVLRKEGGGPSSSS*PSRSNS Trigger: GCTATTAGACCTGCTTGGCAAAGAAGAAGAGGAAGG...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS TCA 90 bp | CAGGCTCTGGGCCACCACTTCATCCACCTTGGTAACATGCTGATATaGGAAATAGTAGGATACTCTCTCCGAGCTCTCCACCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QALGHHFIHLGNMLI*EIVGYSLRALHQQQ Trigger: CTGCTGCTGGTGGAGAGCTCGGAGAGAGTATCCTACTATTTCTCATATCAGCATGTTACCAAGGTGGATGAAGTGGTGGCCCAGAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GGGGTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAAATGAACAATCCCATTaGACCACCAATGTCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTQATVLPPQVLRKEGGNEQSH*TTNVTK Trigger: CTTGGTGACATTGGTGGTCAAATGGGATTGTTCATT...TCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | GTCACCCAGGCCACCGTACTTCCTCCACAGGTGCTGAGAAAAGAAGGAGGAGGTAATGAACAATCCCATTaGACCACCAATGTCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTQATVLPPQVLRKEGGGNEQSH*TTNVTK Trigger: CTTGGTGACATTGGTGGTCAAATGGGATTGTTCATT...ACCTCCTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCAGTGGTGAGCAGAGGCTaGCCATCCTCGCCTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NTRIKRCREFCGFLLDSAVVSRG*PSSPEL Trigger: TAACTCAGGCGAGGATGGCAAGCCTCTGCTCACCAC...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCATGGTTTCGGAGTGGTTaGGCATTGTGTCGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTRIKRCREFCGFLLDSAWFRSG*ALCRRC Trigger: GCACCTGCGACACAATGCCAAACCACTCCGAAACCA...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | AACACAAGGATCAAACGTTGTAGAGAGTTCTGTGGTTTCCTTCTTGACAGTGCAGCGTGGTACAAGTCGTaGGTGGTAAGCCTGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NTRIKRCREFCGFLLDSAAWYKS*VVSLEN Trigger: GTTCTCCAGGCTTACCACCAACGACTTGTACCACGC...TGCACTGTCAAGAAGGAAACCACAGAACTCTCTACAACGTTTGATCCTTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | AAACCCAAACCGAACCTTAGAACATCAAAAACCAAAGACCGTAAGACGAAGCAAGAGAACCGGAAGCCATaGAGGTTGCAGAGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KPKPNLRTSKTKDRKTKQENRKP*RLQRVT Trigger: TGTGACCCTCTGCAACCTCAATGGCTTCCGGTTCTC...TTGCTTCGTCTTACGGTCTTTGGTTTTTGATGTTCTAAGGTTCGGTTTGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS-3UTR CAA 90 bp | AAACCCAAACCGAACCTTAGAACATCAAAAACCAAAGACCGTAAGACGAAGCAATGGAGAGTAGAGGTGTaGGCGAAGATCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPKPNLRTSKTKDRKTKQWRVEV*AKIWML Trigger: CAGCATCCAGATCTTCGCCAACACCTCTACTCTCCA...TTGCTTCGTCTTACGGTCTTTGGTTTTTGATGTTCTAAGGTTCGGTTTGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 72 bp | GCCGCCGTGCGCCCCGCGCACATGTGCCGCAGCCCGTaGAATTTAGTGCGACTCAGGGACGGCCGCCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAVRPAHMCRSP*NLVRLRDGRPL Trigger: CAGGGGGCGGCCGTCCCTGAGTCGCACTAAATTGCACGGGCTGCGGCACATGTGCGCGGGGCGCACGGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 72 bp | GGCGCGGCGGCAGGAAGAGGCGGAAGTCGGCCAGCTTaGGGAACCACTGTCTGCGCGGCTCGTCGCCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GAAAGRGGSRPA*GTTVCAARRPA Trigger: TGCGGGGCGACGAGCCGCGCAGACAGTGGTTCCGCAAGCTGGCCGACTTCCGCCTCTTCCTGCCGCCGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CAA 90 bp | CCCTCGAAGTGGCGCGGCGGCAGGAAGAGGCGGAAGTCGGCCAGCTaGCGGAACCACTGTCTGCGCGGCTCGTCGCCCCGCAGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSKWRGGRKRRKSAS*RNHCLRGSSPRSSS Trigger: CGAGCTGCTGCGGGGCGACGAGCCGCGCAGACAGTGGTTCCGCAAGCTGGCCGACTTCCGCCTCTTCCTGCCGCCGCGCCACTTCGAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS TCA 72 bp | GGCGCGGGAAGCGCAGGGGGTTGTTGTTGCACACGGTaGCAGCGGGGAACGGCAGCTGGCGGCTCCACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGSAGGCCCTR*QRGTAAGGSTR Trigger: GCGAGTGGAGCCGCCAGCTGCCGTTCCCCGCTGTCACCGTGTGCAACAACAACCCCCTGCGCTTCCCGCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CAA 72 bp | CCCTTGGAGAGGCGCGGGAAGCGCAGGGGGTTGTTGTaGCACACGGTGACAGCGGGGAACGGCAGCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLERRGKRRGLL*HTVTAGNGSWR Trigger: CCGCCAGCTGCCGTTCCCCGCTGTCACCGTGTGCAACAACAACCCCCTGCGCTTCCCGCGCCTCTCCAAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 72 bp | AAAGAGCCTCCCGCCGCCGTGCGCCCCGCGCACATGTaGCGCAGCCCGTGCAATTTAGTGCGACTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KEPPAAVRPAHM*RSPCNLVRLRD Trigger: GTCCCTGAGTCGCACTAAATTGCACGGGCTGCGGCACATGTGCGCGGGGCGCACGGCGGCGGGAGGCTCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CCA 72 bp | AGACGGTCCATGAAGGCAGCGCTGATGCCCTCGAAGTaGCGCGGCGGCAGGAAGAGGCGGAAGTCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSMKAALMPSK*RGGRKRRKSAS Trigger: GCTGGCCGACTTCCGCCTCTTCCTGCCGCCGCGCCACTTCGAGGGCATCAGCGCTGCCTTCATGGACCGTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 72 bp | GGTTCGAGGACCAGGACAACAGCAAGCCAAGGGACGTaGAGAAGGCCAGCACCCACAGCGCCCGCCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSRTRTTASQGT*RRPAPTAPAAG Trigger: TCCAGCGGCGGGCGCTGTGGGTGCTGGCCTTCTGCACGTCCCTTGGCTTGCTGTTGTCCTGGTCCTCGAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS CCA 72 bp | GTCCTAGCCAGTGGCCCGCGTAGTAGAGGTCCCCCTTaGAGAGGCGCGGGAAGCGCAGGGGGTTGTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLASGPRSRGPP*RGAGSAGGCCC Trigger: GCAACAACAACCCCCTGCGCTTCCCGCGCCTCTCCAAGGGGGACCTCTACTACGCGGGCCACTGGCTAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS TCA 72 bp | CAGCTGGCGGCTCCACTCGCGGTGCACTCGCGTGTGTaGCGGGAAACTGAGCCAGTAGAGCAGGCGGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: QLAAPLAVHSRV*RETEPVEQAVR Trigger: TCGAACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACACGCGAGTGCACCGCGAGTGGAGCCGCCAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
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| CDS GCA 72 bp | CACCAGCAGCAGGCCCAGAGATCCCACGAAGGCCACTaGCCAAAGCACACGCCGGATGGTCAGCGGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: HQQQAQRSHEGH*PKHTPDGQRPI Trigger: TATGGGCCGCTGACCATCCGGCGTGTGCTTTGGGCAGTGGCCTTCGTGGGATCTCTGGGCCTGCTGCTGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS CCA 72 bp | TTGTTGTTGCACACGGTGACAGCGGGGAACGGCAGCTaGCGGCTCCACTCGCGGTGCACTCGCGTGTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLHTVTAGNGS*RLHSRCTRVCD Trigger: GTCACACACGCGAGTGCACCGCGAGTGGAGCCGCCAGCTGCCGTTCCCCGCTGTCACCGTGTGCAACAACAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS TCA 72 bp | TCCACTCGCGGTGCACTCGCGTGTGTGACGGGAAACTaGGCCAGTAGAGCAGGCGGTTCGAGGACCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: STRGALACVTGN*ASRAGGSRTRT Trigger: TGTCCTGGTCCTCGAACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACACGCGAGTGCACCGCGAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021045.13 |
||
| CDS GCA 72 bp | TGTCGGAGGGCCTCCAGCACGGTGGGGTCCGCCAGATaGGGGTCAGGAATCTGCAAGTTGACATCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRRASSTVGSAR*GSGICKLTSNR Trigger: CCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCACCGTGCTGGAGGCCCTCCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS CCA 72 bp | ATCCCACGAAGGCCACTGCCCAAAGCACACGCCGGATaGTCAGCGGCCCATACACGAAGATGTGGCGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: IPRRPLPKAHAG*SAAHTRRCGGC Trigger: GCATCCGCCACATCTTCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTTTGGGCAGTGGCCTTCGTGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS CAA 72 bp | GTGGGGTCCGCCAGATGCGGGTCAGGAATCTGCAAGTaGACATCCAACAGGGCCAGCAACTCCCCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSARCGSGICK*TSNRASNSPAW Trigger: CCACGCTGGGGAGTTGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
||
| CDS TCA 72 bp | TGGGGTCCGCCAGATGCGGGTCAGGAATCTGCAAGTTaGCATCCAACAGGGCCAGCAACTCCCCAGCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WGPPDAGQESAS*HPTGPATPQRG Trigger: ACCACGCTGGGGAGTTGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 72 bp | GTAGAGGTGTTGGCGAAGATCTGGATGCTGGAAGGTTaGAGGCTGCCCTCGCTGGGGCTCTCCTTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VEVLAKIWMLEG*RLPSLGLSLRS Trigger: GGACCTCAAGGAGAGCCCCAGCGAGGGCAGCCTGCAACCTTCCAGCATCCAGATCTTCGCCAACACCTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 72 bp | AGCACGGTGGGGTCCGCCAGATGCGGGTCAGGAATCTaGAAGTTGACATCCAACAGGGCCAGCAACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: STVGSARCGSGI*KLTSNRASNSP Trigger: TGGGGAGTTGCTGGCCCTGTTGGATGTCAACTTGCAGATTCCTGACCCGCATCTGGCGGACCCCACCGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS GCA 72 bp | CAGCAGGCAATCTCCTCCAGGGTGCCCAAAGCTGTCTaGAGGGGCACGTTCACAGTGTGGCTGATGGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: QQAISSRVPKAV*RGTFTVWLMVS Trigger: CGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCACCCTGGAGGAGATTGCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 72 bp | ACACGCCGGATGGTCAGCGGCCCATACACGAAGATGTaGCGGATGCCATGGAGAGTAGAGGTGTTGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: TRRMVSGPYTKM*RMPWRVEVLAK Trigger: CTTCGCCAACACCTCTACTCTCCATGGCATCCGCCACATCTTCGTGTATGGGCCGCTGACCATCCGGCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS CAA 72 bp | TTGGTGGTAAGCCTGGAGAACCGGAAGCCATTGAGGTaGCAGAGGGTCACAGCTGGGAAGACCAGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LVVSLENRKPLR*QRVTAGKTRLW Trigger: CCAGAGCCTGGTCTTCCCAGCTGTGACCCTCTGCAACCTCAATGGCTTCCGGTTCTCCAGGCTTACCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS TCA 72 bp | CCAAAGCTGTCTGCAGGGGCACGTTCACAGTGTGGCTaGTGGTTTCGGAGTGGTTTGGCATTGTGTCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PKLSAGARSQCG*WFRSGLALCRR Trigger: CCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 72 bp | GTGCCCAAAGCTGTCTGCAGGGGCACGTTCACAGTGTaGCTGATGGTTTCGGAGTGGTTTGGCATTGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: VPKAVCRGTFTV*LMVSEWFGIVS Trigger: CGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCTGCAGACAGCTTTGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 72 bp | AGGGGCACGTTCACAGTGTGGCTGATGGTTTCGGAGTaGTTTGGCATTGTGTCGCAGGTGCTCATGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RGTFTVWLMVSE*FGIVSQVLMFS Trigger: TGAGAACATGAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 72 bp | CACGTTCACAGTGTGGCTGATGGTTTCGGAGTGGTTTaGCATTGTGTCGCAGGTGCTCATGTTCTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: HVHSVADGFGVV*HCVAGAHVLIM Trigger: CATGATGAGAACATGAGCACCTGCGACACAATGCCAAACCACTCCGAAACCATCAGCCACACTGTGAACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS CCA 72 bp | TTTGGCATTGTGTCGCAGGTGCTCATGTTCTCATCATaGCTCCCTTCCTCTTCTTCTTTGCCAAGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: FGIVSQVLMFSS*LPSSSSLPSRS Trigger: AGACCTGCTTGGCAAAGAAGAAGAGGAAGGGAGCCATGATGAGAACATGAGCACCTGCGACACAATGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021045.13 ENSMUST00000066197.7 |
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| CDS TCA 72 bp | GGCCACCACTTCATCCACCTTGGTAACATGCTGATATaGGAAATAGTAGGATACTCTCTCCGAGCTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GHHFIHLGNMLI*EIVGYSLRALH Trigger: GTGGAGAGCTCGGAGAGAGTATCCTACTATTTCTCATATCAGCATGTTACCAAGGTGGATGAAGTGGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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| CDS CAA 72 bp | ACACTTCCCATATTTTGTAAACACTGTGGTGAAGTCTaGATGCCCACACTCCTGCCCCTTGAACTTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: TLPIFCKHCGEV*MPTLLPLELAV Trigger: TACTGCAAGTTCAAGGGGCAGGAGTGTGGGCATCAAGACTTCACCACAGTGTTTACAAAATATGGGAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066197.7 |
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