Pregenerated sensors for ASIC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023017Ensembl transcript IDs: ENSMUST00000023758.9, ENSMUST00000228185.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCACTGGGATAGGTGGAGCAAGGTAGAGGGTATGTTAAGGCTGTaGGGAGGGCAGAGGGTGCCCCGGTCGTGGGGGCAAAGGGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: GHWDRWSKVEGMLRL*GGQRVPRSWGQRAR Trigger: CCTCGCCCTTTGCCCCCACGACCGGGGCACCCTCTGCCCTCCCCACAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | GCCGTGCCCCTCTCCCTGAGCCGGGCGCTAACCAGCCAGGTCTTCTaGGGGATGTCACAGAGGGTTGCCTCTTGGGATCTCTCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: AVPLSLSRALTSQVF*GMSQRVASWDLSPA Trigger: TGCTGGAGAGAGATCCCAAGAGGCAACCCTCTGTGACATCCCCCAGAAGACCTGGCTGGTTAGCGCCCGGCTCAGGGAGAGGGGCACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR TCA 90 bp | CGGAGTCCTTACCTGGAGACTTGGGCTCGTGGGGAGTCACCCGGCTaGGAGCATCTCTTAAGGCTAGGGAAGCCCCCACACCAGCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RSPYLETWARGESPG*EHLLRLGKPPHQPS Trigger: AGAGGGCTGGTGTGGGGGCTTCCCTAGCCTTAAGAGATGCTCTCAGCCGGGTGACTCCCCACGAGCCCAAGTCTCCAGGTAAGGACTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | CCGAAGAAAGAAAGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTaGGTACCCACCGCCCAGCTGCAAGAGGGAGTCACCAATCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PKKERPLSQGSGFWL*VPTAQLQEGVTNPQ Trigger: CTGGGGATTGGTGACTCCCTCTTGCAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCTTTCTTTCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | GGCACCCCGAAGAAAGAAAGGCCACTGAGTCAGGGCTCCGGCTTCTaGCTGTGGGTACCCACCGCCCAGCTGCAAGAGGGAGTCACCAAT | + |
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Preference number: 1 (lower is better) Translates to: GTPKKERPLSQGSGF*LWVPTAQLQEGVTN Trigger: ATTGGTGACTCCCTCTTGCAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCTTTCTTTCTTCGGGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | CCTCAGGGAGGCCACAGTCAGCCAGGCAAAGGGCACTGGGATAGGTaGAGCAAGGTAGAGGGTATGTTAAGGCTGTGGGGAGGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PQGGHSQPGKGHWDR*SKVEGMLRLWGGQR Trigger: CCTCTGCCCTCCCCACAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGGCTGACTGTGGCCTCCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | TCACCAGAAAATGCAAGCGGTGGGCCTGGGCATCAAGGTGAGGACTaGGCCCTGGGCACCCCGAAGAAAGAAAGGCCACTGAGTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SPENASGGPGHQGED*ALGTPKKERPLSQG Trigger: GCCCTGACTCAGTGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGGCCCACCGCTTGCATTTTCTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | AGAAGGCCAGGAATGAGATTGGAGAGCTGGCCTGGGAAGGGTGTCTaGTTGAGGAGGCCCTCTACCTCACCTTGTGGCCCCCTTAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: RRPGMRLESWPGKGV*LRRPSTSPCGPLRV Trigger: TACCCTAAGGGGGCCACAAGGTGAGGTAGAGGGCCTCCTCAACCAGACACCCTTCCCAGGCCAGCTCTCCAATCTCATTCCTGGCCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | AGTCACTTCCCTCAGGGAGGCCACAGTCAGCCAGGCAAAGGGCACTaGGATAGGTGGAGCAAGGTAGAGGGTATGTTAAGGCTGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SHFPQGGHSQPGKGH*DRWSKVEGMLRLWG Trigger: TCCCCACAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGGCTGACTGTGGCCTCCCTGAGGGAAGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 90 bp | GATCTGCCCATAAGTCCTGTTTTGGGATTAGAGACCAAGAGACAGTaGGGACAGAGAAGGCCAGGAATGAGATTGGAGAGCTGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DLPISPVLGLETKRQ*GQRRPGMRLESWPG Trigger: CCCAGGCCAGCTCTCCAATCTCATTCCTGGCCTTCTCTGTCCCCACTGTCTCTTGGTCTCTAATCCCAAAACAGGACTTATGGGCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR GCA 90 bp | CCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTaGTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGACACCAG | + |
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Preference number: 1 (lower is better) Translates to: PPRQCEGYNARVISL*FSEGCVYTVQYRHQ Trigger: CTGGTGTCTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR GCA 90 bp | CACAGCTTCCTTTATGTCGCCACCGAGACAGTGCGAAGGTTACAATaGGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAC | + |
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Preference number: 1 (lower is better) Translates to: HSFLYVATETVRRLQ*ACHLLVLLRGMCVH Trigger: GTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACATAAAGGAAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR TCA 90 bp | TATAGTAATATAGAGTCTGTATCATATAGAAATAGAAAATGCAGATaGGGTTGCCGAGAGAAGCGGATGACGTCGGGGAAGAGGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: YSNIESVSYRNRKCR*GCREKRMTSGKRTW Trigger: CCAAGTCCTCTTCCCCGACGTCATCCGCTTCTCTCGGCAACCTCATCTGCATTTTCTATTTCTATATGATACAGACTCTATATTACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR TCA 90 bp | AGCGGTGGGCCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAAGCTTTGGGGTGGAGGTaGCTTACAGATATTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: SGGPGHQGEDWALGTPKKALGWR*LTDIGM Trigger: CATCCCAATATCTGTAAGTCACCTCCACCCCAAAGC...TTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGGCCCACCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR GCA 90 bp | AGCGGTGGGCCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAACGTGTCATCTCCTTGTaGTTCTCAGAGGGATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SGGPGHQGEDWALGTPKKRVISL*FSEGCV Trigger: CACACATCCCTCTGAGAAGCACAAGGAGATGACACG...TTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGGCCCACCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATTCCTGGGTAGGAGCTACCTCTCCAGCAGTCACTTCCCTCAGGGAGGACAGAATTCAGGCTTaGAGCTGGGGGCGGCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: VLHSWVGATSPAVTSLREDRIQA*SWGRQR Trigger: ACGCTGCCGCCCCCAGCTCCAAGCCTGAATTCTGTC...CTCCCTGAGGGAAGTGACTGCTGGAGAGGTAGCTCCTACCCAGGAATGGAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTGGGTACCCACCGCCCAGCTGGTGACTTACAGATATTaGGATGTGGCCTACAGCACC | + |
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Preference number: 2 (lower is better) Translates to: RPLSQGSGFWLWVPTAQLVTYRY*DVAYST Trigger: GGTGCTGTAGGCCACATCCCAATATCTGTAAGTCAC...CAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GGCGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGACCAGCCAGGTCTTCTaGGGGATGTCACAGAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GGRAVLGDKREWRGRQTGTSQVF*GMSQRV Trigger: AACCCTCTGTGACATCCCCCAGAAGACCTGGCTGGT...CCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCATTCAGGCTTGGAGCTaGGGGCGGCAGCGTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: MSPPRQCEGYNARVISLCIQAWS*GRQRGA Trigger: TGCTCCACGCTGCCGCCCCCAGCTCCAAGCCTGAAT...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCGGAGACTTGGGCTCGTaGGGAGTCACCCGGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: MSPPRQCEGYNARVISLCGDLGS*GVTRLR Trigger: TCTCAGCCGGGTGACTCCCCACGAGCCCAAGTCTCC...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATTCCTGGGTAGGAGCTACCTCTCCAGCAGTCACTTCCCTCAGGGAGCGGGAGGGCGGTTCTTaGAGACAAGAGGGAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: VLHSWVGATSPAVTSLREREGGS*RQEGME Trigger: CTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCG...CTCCCTGAGGGAAGTGACTGCTGGAGAGGTAGCTCCTACCCAGGAATGGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTCAAAGATGCCAAAGCCTTGCTCTCTGGCTCCAGGCCAACGTACACAGTACCCACCGCCCAGCTaGAAGAGGGAGTCACCAATC | + |
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Preference number: 2 (lower is better) Translates to: EVSKMPKPCSLAPGQRTQYPPPS*KRESPI Trigger: GATTGGTGACTCCCTCTTGCAGCTGGGCGGTGGGTA...CTGTGTACGTTGGCCTGGAGCCAGAGAGCAAGGCTTTGGCATCTTTGAGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATTCCTGGGTAGGAGCTACCTCTCCAGCAGTCACTTCCCTCAGGGAGTCTCTCCAGCAGCTTTaGGGTGGAGGTGACTTACAG | + |
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Preference number: 2 (lower is better) Translates to: VLHSWVGATSPAVTSLRESLQQL*GGGDLQ Trigger: CTGTAAGTCACCTCCACCCCAAAGCTGCTGGAGAGA...CTCCCTGAGGGAAGTGACTGCTGGAGAGGTAGCTCCTACCCAGGAATGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCCCAATCTCTACTTCTTCAGGAAATCCTCTGCCCCGTAAAGATTCCGTACACGGAGTCCTTACCTaGAGACTTGGGCTCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GVPISTSSGNPLPRKDSVHGVLT*RLGLVG Trigger: CCCCACGAGCCCAAGTCTCCAGGTAAGGACTCCGTG...TACGGAATCTTTACGGGGCAGAGGATTTCCTGAAGAAGTAGAGATTGGGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CAA 90 bp | TCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTaGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGACAC | + |
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Preference number: 2 (lower is better) Translates to: SPPRQCEGYNARVIS*CFSEGCVYTVQYRH Trigger: GTGTCTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCAAAGGGCACTGGGATAGGTGGAGCAAGGTAGAGGGTATGTTAAGGCTGAATAGAAAATGCAGATaGGGTTGCCGAGAGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: PGKGHWDRWSKVEGMLRLNRKCR*GCREKR Trigger: CCGCTTCTCTCGGCAACCTCATCTGCATTTTCTATT...CAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR GCA 90 bp | CAGACACCAGGGGAGAATCCAGCTCTTTATACGGGCAAAGGCATTCAGAGACAGGATGTCACAGAGGGTTaGCTCTTGGGATCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QTPGENPALYTGKGIQRQDVTEG*LLGSLS Trigger: GGAGAGAGATCCCAAGAGGCAACCCTCTGTGACATC...CTGTCTCTGAATGCCTTTGCCCGTATAAAGAGCTGGATTCTCCCCTGGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR GCA 90 bp | TTACAATGCGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACCACTGCCCAGGGATaGAGTTTAAGTCCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LQCACHLLVLLRGMCVHSTTAQG*SLSPQG Trigger: ACCCTGGGGACTTAAACTGCATCCCTGGGCAGTGGT...ACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CAA 90 bp | AGGTTGCCGAGAGAAGCGGATGACGTCGGGGAAGAGGACTTGGGATaGTTCCATAAGAAAATTTATGGATGTGGCCTTCTGCAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RLPREADDVGEEDLG*FHKKIYGCGLLQRP Trigger: AGGCCTTTGCAGAAGGCCACATCCATAAATTTTCTTATGGAACAATCCCAAGTCCTCTTCCCCGACGTCATCCGCTTCTCTCGGCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGACACCAGGGGAGAAGGTGGACACTCAGATaGCATACAGCCAGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: LCFSEGCVYTVQYRHQGRRWTLR*HTARQT Trigger: TGTCTGTCTGGCTGTATGTCATCTGAGTGTCCACCT...TCTCCCCTGGTGTCTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CAA 90 bp | CAGATGAGGTTGCCGAGAGAAGCGGATGACGTCGGGGAAGAGGACTaGGGATTGTTCCATAAGAAAATTTATGGATGTGGCCTTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: QMRLPREADDVGEED*GLFHKKIYGCGLLQ Trigger: TTGCAGAAGGCCACATCCATAAATTTTCTTATGGAACAATCCCAAGTCCTCTTCCCCGACGTCATCCGCTTCTCTCGGCAACCTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGAGAGAAGGCCAGGAATaGGATTGGAGAGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVSFWGVLISKQLLRTKRREGQE*DWRAGL Trigger: CAGGCCAGCTCTCCAATCTCATTCCTGGCCTTCTCT...CCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGCAGAGGGTTGCCTCTTaGGATCTCTCTCCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PVSFWGVLISKQLLRTKRQRVAS*DLSPAA Trigger: AGCTGCTGGAGAGAGATCCCAAGAGGCAACCCTCTG...CCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGTCTATTGGAGAGCTGGCCTaGGAAGGGTGTCTGGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: VSFWGVLISKQLLRTKRSIGELA*EGCLVE Trigger: CTCAACCAGACACCCTTCCCAGGCCAGCTCTCCAAT...AGACCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGTCTGCTGGGAGAGGACTCTaGTCAAGACTCCTTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VSFWGVLISKQLLRTKRSAGRGL*SRLLSH Trigger: GTGAGAAAGGAGTCTTGACCAGAGTCCTCTCCCAGC...AGACCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGTCTGTTAAAATAAAAAGATaGGATAGAGGCTGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSFWGVLISKQLLRTKRSVKIKR*DRGWER Trigger: CCTCTCCCAGCCTCTATCTCATCTTTTTATTTTAAC...AGACCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | GAAAGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTaGGTACCCACCGCCCAGCTGCAAGAGGGAGTCACC | + |
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Preference number: 3 (lower is better) Translates to: ERPLSQGSGFWL*VPTAQLQEGVT Trigger: GGTGACTCCCTCTTGCAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCTTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | ACATACAGCCAGACAGACAGAATTCAGGCTTGGAGCTaGGGGCGGCAGCGTGGAGCAGAGGGGCAGCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TYSQTDRIQAWS*GRQRGAEGQPE Trigger: CTCAGGCTGCCCCTCTGCTCCACGCTGCCGCCCCCAGCTCCAAGCCTGAATTCTGTCTGTCTGGCTGTATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | CTCTCCCTGAGCCGGGCGCTAACCAGCCAGGTCTTCTaGGGGATGTCACAGAGGGTTGCCTCTTGGGATCTC | + |
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Preference number: 3 (lower is better) Translates to: LSLSRALTSQVF*GMSQRVASWDL Trigger: GAGATCCCAAGAGGCAACCCTCTGTGACATCCCCCAGAAGACCTGGCTGGTTAGCGCCCGGCTCAGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | AATGCAAGCGGTGGGCCTGGGCATCAAGGTGAGGACTaGGCCCTGGGCACCCCGAAGAAAGAAAGGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: NASGGPGHQGED*ALGTPKKERPL Trigger: CAGTGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGGCCCACCGCTTGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR TCA 72 bp | TACCTGGAGACTTGGGCTCGTGGGGAGTCACCCGGCTaGGAGCATCTCTTAAGGCTAGGGAAGCCCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: YLETWARGESPG*EHLLRLGKPPH Trigger: GTGTGGGGGCTTCCCTAGCCTTAAGAGATGCTCTCAGCCGGGTGACTCCCCACGAGCCCAAGTCTCCAGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | CTGGGCACGGAGTCCTTACCTGGAGACTTGGGCTCGTaGGGAGTCACCCGGCTGAGAGCATCTCTTAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LGTESLPGDLGS*GVTRLRASLKA Trigger: AGCCTTAAGAGATGCTCTCAGCCGGGTGACTCCCCACGAGCCCAAGTCTCCAGGTAAGGACTCCGTGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | GGAATGAGATTGGAGAGCTGGCCTGGGAAGGGTGTCTaGTTGAGGAGGCCCTCTACCTCACCTTGTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GMRLESWPGKGV*LRRPSTSPCGP Trigger: GGGGCCACAAGGTGAGGTAGAGGGCCTCCTCAACCAGACACCCTTCCCAGGCCAGCTCTCCAATCTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAAGAAAGGCCAGCGCGTGTCATCTCCTaGTGCTTCTCAGAGGGATGT | + |
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Preference number: 3 (lower is better) Translates to: PGHQGEDWALGTPKKERPARVIS*CFSEGC Trigger: ACATCCCTCTGAGAAGCACAAGGAGATGACACGCGC...TGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | GGCCACAGTCAGCCAGGCAAAGGGCACTGGGATAGGTaGAGCAAGGTAGAGGGTATGTTAAGGCTGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GHSQPGKGHWDR*SKVEGMLRLWG Trigger: TCCCCACAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGGCTGACTGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR CCA 72 bp | ACAGAGAAGGCCAGGAATGAGATTGGAGAGCTGGCCTaGGAAGGGTGTCTGGTTGAGGAGGCCCTCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: TEKARNEIGELA*EGCLVEEALYL Trigger: GAGGTAGAGGGCCTCCTCAACCAGACACCCTTCCCAGGCCAGCTCTCCAATCTCATTCCTGGCCTTCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR TCA 72 bp | AGACCAAGAGACAGTGGGGACAGAGAAGGCCAGGAATaGGATTGGAGAGCTGGCCTGGGAAGGGTGTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: RPRDSGDREGQE*DWRAGLGRVSG Trigger: ACCAGACACCCTTCCCAGGCCAGCTCTCCAATCTCATTCCTGGCCTTCTCTGTCCCCACTGTCTCTTGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| 3UTR GCA 72 bp | TCTCACCACAGACAAGAGGGAACCACTGCCCAGGGATaGAGTTTAAGTCCCCAGGGTAGCTGGGGGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SHHRQEGTTAQG*SLSPQGSWGQL Trigger: TAACTGCCCCCAGCTACCCTGGGGACTTAAACTGCATCCCTGGGCAGTGGTTCCCTCTTGTCTGTGGTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CCA 72 bp | TCCAGCAGCTTTGGGGTGGAGGTGACTTACAGATATTaGGATGTGGCCTACAGCACCAGGGCCACATGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSFGVEVTYRY*DVAYSTRATWS Trigger: ACTCCATGTGGCCCTGGTGCTGTAGGCCACATCCCAATATCTGTAAGTCACCTCCACCCCAAAGCTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGACACCAGGGGAGAACAGAGGGTTGCCTCTaGGGATCTCTCTCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCFSEGCVYTVQYRHQGRTEGCL*GSLSSS Trigger: GCTGCTGGAGAGAGATCCCAAGAGGCAACCCTCTGT...TCTCCCCTGGTGTCTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR TCA 72 bp | AGCCTTGCTCTCTGGCTCCAGGCCAACGTACACAGGTaGTCTGCCCATAAGTCCTGTTTTGGGATTAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLALWLQANVHR*SAHKSCFGIRD Trigger: GTCTCTAATCCCAAAACAGGACTTATGGGCAGATCACCTGTGTACGTTGGCCTGGAGCCAGAGAGCAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR GCA 72 bp | CTTTATGTCGCCACCGAGACAGTGCGAAGGTTACAATaGGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LYVATETVRRLQ*ACHLLVLLRGM Trigger: CATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR GCA 72 bp | CTTGAGAACCAAGAGGTCTCAAAGATGCCAAAGCCTTaGTCTCTGGCTCCAGGCCAACGTACACAGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LENQEVSKMPKP*SLAPGQRTQVI Trigger: GATCACCTGTGTACGTTGGCCTGGAGCCAGAGAGCAAGGCTTTGGCATCTTTGAGACCTCTTGGTTCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGGGATGTCACAGAGGGTaGCCTCTTGGGATCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ACHLLVLLRGMCVHSTVQGCHRG*PLGISL Trigger: GAGAGAGATCCCAAGAGGCAACCCTCTGTGACATCC...CTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCAAAGGGCACTGGGATAGGTGGAGCAAGGTAGAGGGTATGTTAAGGCTGGTCGGGGAAGAGGACTaGGGATTGTTCCATAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGKGHWDRWSKVEGMLRLVGEED*GLFHKK Trigger: TTTCTTATGGAACAATCCCAAGTCCTCTTCCCCGAC...CAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR GCA 72 bp | CAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTaGTTCTCAGAGGGATGTGTGTACACAGTACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QCEGYNARVISL*FSEGCVYTVQY Trigger: GTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR GCA 72 bp | TCTAAACAACTCTTGAGAACCAAGAGGTCTCAAAGATaGCAAAGCCTTGCTCTCTGGCTCCAGGCCAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: SKQLLRTKRSQR*QSLALWLQANV Trigger: TACGTTGGCCTGGAGCCAGAGAGCAAGGCTTTGGCATCTTTGAGACCTCTTGGTTCTCAAGAGTTGTTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCGGCTTCTGGCTGTGGGTACCCACCGCCCAGCTGCAAGAGGGAGTCACCGCCACGCCCTTATCTaGGCTGTTCCTCTTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRLLAVGTHRPAARGSHRHALI*AVPLSL Trigger: GAGGCTAAGAGGAACAGCGCAGATAAGGGCGTGGCG...GTGACTCCCTCTTGCAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGAGCCCAGCTGGTCGATaGAAGGAGGCTCGTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRAVLGDKREWRGRQTGSPAGR*KEARPD Trigger: GTCAGGACGAGCCTCCTTTCATCGACCAGCTGGGCT...CCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGCCATGGACAGCTCCTTaGCGTAGCGGGTCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRAVLGDKREWRGRQTGPWTAP*RSGSGC Trigger: GCAACCTGACCCGCTACGGCAAGGAGCTGTCCATGG...CCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAAGAAAGGCCAACTGCACACGCTCAGTaGACACACACAGCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHQGEDWALGTPKKERPTAHAQ*THTAGR Trigger: CCGTCCTGCTGTGTGTGTGCACTGAGCGTGTGCAGT...TGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | CTGACTCACCAGAAAATGCAAGCGGTGGGCCTGGGCATCAAGGTGAGGACTGGGTGGATGCTCACCGGCTaGACACCACCCACCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTHQKMQAVGLGIKVRTGWMLTG*TPPTSS Trigger: GGAGGAGGTGGGTGGTGTCCAGCCGGTGAGCATCCA...CCCAGTCCTCACCTTGATGCCCAGGCCCACCGCTTGCATTTTCTGGTGAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGCTCCGGAGTACAGTATaGGGCATCCCCTGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRAVLGDKREWRGRQTGLRSTV*GIPWHV Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCGGAG...CCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTGGGTACCCACCGCCCAGCTGCTGCACTTTGATGCCTaGTTCGAACGATGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSQGSGFWLWVPTAQLLHFDA*FERCLI Trigger: GATGAGACATCGTTCGAAGCAGGCATCAAAGTGCAG...CAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCATTCCTGGGTAGGAGCTACCTCTCCAGCAGTCACTTCCCTCAGGGAGCAATCCGGCAGGCCGTaGTGCTGTAGGAGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLHSWVGATSPAVTSLREQSGRP*CCRSRR Trigger: TCTTCGACTCCTACAGCATCACGGCCTGCCGGATTG...CTCCCTGAGGGAAGTGACTGCTGGAGAGGTAGCTCCTACCCAGGAATGGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGTGTGGATCTGCACTTTaGTGCCTGCTTCGAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGRAVLGDKREWRGRQTGCGSAL*CLLRTM Trigger: CATCGTTCGAAGCAGGCATCAAAGTGCAGATCCACA...CCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | TGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCTCGTGCAGCGTGGAGCTaGTGGCAAAAGCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CRHRDSAKVTMRVSSPCARAAWS*WQKPGC Trigger: GCATCCAGGCTTTTGCCAGCAGCTCCACGCTGCACG...AGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCAAAGGGCACTGGGATAGGTGGAGCAAGGTAGAGGGTATGTTAAGGCTGATGTGGGCAAGACCGTaGAGCGTGGAGCTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGKGHWDRWSKVEGMLRLMWARP*SVELLA Trigger: TGCCAGCAGCTCCACGCTGCACGGTCTTGCCCACAT...CAGCCTTAACATACCCTCTACCTTGCTCCACCTATCCCAGTGCCCTTTGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | CGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGCCGTCACCCAAAAGCCCTaGGATCTCATAGGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: REGGSWRQEGMEGETNRAVTQKP*DLIGLL Trigger: AAGAAGGCCTATGAGATCGCAGGGCTTTTGGGTGAC...GGCCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCATTCCTGGGTAGGAGCTACCTCTCCAGCAGTCACTTCCCTCAGGGAGTCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLHSWVGATSPAVTSLRESWPGT*LRLCWG Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...CTCCCTGAGGGAAGTGACTGCTGGAGAGGTAGCTCCTACCCAGGAATGGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | CAGACACCAGGGGAGAATCCAGCTCTTTATACGGGCAAAGGCATTCAGAGACAGACACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPGENPALYTGKGIQRQTQGPQ*PLQRQP Trigger: CGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGT...CTGTCTCTGAATGCCTTTGCCCGTATAAAGAGCTGGATTCTCCCCTGGTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | CGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCTTCTCAAGACCGTGCAGCGTaGAGCTGCTGGCAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHRDSAKVTMRVSSPCASQDRAA*SCWQKP Trigger: AGGCTTTTGCCAGCAGCTCCACGCTGCACGGTCTTG...AGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CAA 72 bp | CTCCAGCAGCTTTGGGGTGGAGGTGACTTACAGATATaGGGATGTGGCCTACAGCACCAGGGCCACATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQQLWGGGDLQI*GCGLQHQGHME Trigger: CTCCATGTGGCCCTGGTGCTGTAGGCCACATCCCAATATCTGTAAGTCACCTCCACCCCAAAGCTGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACCAAGAGGTCTCAAAGATGCCAAAGCCTTGCTCTCTGGCTCCAGGCCCTGCTGGCAAAAGCCTaGATGCTCACCGGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LRTKRSQRCQSLALWLQALLAKA*MLTGWT Trigger: TGTCCAGCCGGTGAGCATCCAGGCTTTTGCCAGCAG...GGCCTGGAGCCAGAGAGCAAGGCTTTGGCATCTTTGAGACCTCTTGGTTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGACTCCTTTCTCACCACAGACAAGAGGGAACCACTGCCCAGGGATGCAGTGCCTCCCCTCGGAAGTaGCACGAGAGAAGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLSHHRQEGTTAQGCSASPRK*HERSMS Trigger: AGACATGCTTCTCTCGTGCCACTTCCGAGGGGAGGC...ACTGCATCCCTGGGCAGTGGTTCCCTCTTGTCTGTGGTGAGAAAGGAGTCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGGGATGTGGCCTACAGCACCAGGGCCACATGGAGTCCCAATCTCTACTTGCAGCGTGGAGCTGCTaGCAAAAGCCTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGCGLQHQGHMESQSLLAAWSC*QKPGCS Trigger: TGAGCATCCAGGCTTTTGCCAGCAGCTCCACGCTGC...AAGTAGAGATTGGGACTCCATGTGGCCCTGGTGCTGTAGGCCACATCCCAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | TTACAATGCGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTCATGGTCTTCAGCCGTaGCCGCCCATCTTGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQCACHLLVLLRGMCVHSHGLQP*PPILAR Trigger: TCGGGCCAAGATGGGCGGCCACGGCTGAAGACCATG...ACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGGGATGTGGCCTACAGCACCAGGGCCACATGGAGTCCCAATCTCTACTTGGTGAGGTAGGATGTTaGCAGCGTACGTCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGCGLQHQGHMESQSLLGEVGC*QRTSSR Trigger: CCGGGATGACGTACGCTGCCAACATCCTACCTCACC...AAGTAGAGATTGGGACTCCATGTGGCCCTGGTGCTGTAGGCCACATCCCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR TCA 90 bp | CAGACACCAGGGGAGAATCCAGCTCTTTATACGGGCAAAGGCATTCAGAGACAGTCTCATACCTGTTGTTaGGCAGGGCCAGCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTPGENPALYTGKGIQRQSHTCC*AGPAVP Trigger: GGGAACTGCTGGCCCTGCTCAACAACAGGTATGAGA...CTGTCTCTGAATGCCTTTGCCCGTATAAAGAGCTGGATTCTCCCCTGGTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCTCGAATGTCATGCCCTaGTCTGTCGTAGAACTCACG | + |
|
Preference number: 4 (lower is better) Translates to: MSPPRQCEGYNARVISLCSNVMP*SVVELT Trigger: CGTGAGTTCTACGACAGAGCAGGGCATGACATTCGA...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | TTACAATGCGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTTGGCAAAAGCCTGGATaGTCACCGGCTGGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQCACHLLVLLRGMCVHSWQKPG*SPAGHH Trigger: GTGGTGTCCAGCCGGTGAGCATCCAGGCTTTTGCCA...ACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | GATGAGATAGAGGCTGGGAGAGGACTCTGGTCAAGACTCCTTTCTCACCACAGAGCACACTCCTTGTACTaGTCCGGAGTACAGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEIEAGRGLWSRLLSHHRAHSLY*SGVQYG Trigger: CCCATACTGTACTCCGGAGCAGTACAAGGAGTGTGC...TCTGTGGTGAGAAAGGAGTCTTGACCAGAGTCCTCTCCCAGCCTCTATCTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGGGATGTGGCCTACAGCACCAGGGCCACATGGAGTCCCAATCTCTACTTCTCTTAGCCTCCTTCTaGCACTTCCCACGTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ILGCGLQHQGHMESQSLLLLASF*HFPRLH Trigger: GTGTAGACGTGGGAAGTGCCAGAAGGAGGCTAAGAG...AAGTAGAGATTGGGACTCCATGTGGCCCTGGTGCTGTAGGCCACATCCCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | CAGACACCAGGGGAGAATCCAGCTCTTTATACGGGCAAAGGCATTCAGAGACAGGCACCATACGGCAGTTaGAGTTTTCCACCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTPGENPALYTGKGIQRQAPYGS*SFPPGN Trigger: GTTACCTGGTGGAAAACTGCAACTGCCGTATGGTGC...CTGTCTCTGAATGCCTTTGCCCGTATAAAGAGCTGGATTCTCCCCTGGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCCCAATCTCTACTTCTTCAGGAAATCCTCTGCCCCGTAAAGATTCCGTATCGTAGCGGGTCAGGTTaGAGGGCATCTCACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ESQSLLLQEILCPVKIPYRSGSG*RASHTH Trigger: GTGTGTGTGAGATGCCCTGCAACCTGACCCGCTACG...ATACGGAATCTTTACGGGGCAGAGGATTTCCTGAAGAAGTAGAGATTGGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTCCCAATCTCTACTTCTTCAGGAAATCCTCTGCCCCGTAAAGATTCCGTAATGAGCCTCTGCTCCTaGCAAGACACAAACGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPISTSSGNPLPRKDSVMSLCS*QDTNVW Trigger: CCAGACGTTTGTGTCTTGCCAGGAGCAGAGGCTCAT...TACGGAATCTTTACGGGGCAGAGGATTTCCTGAAGAAGTAGAGATTGGGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACCAAGAGGTCTCAAAGATGCCAAAGCCTTGCTCTCTGGCTCCAGGCCCACACACAGTATTCCTaGTCTTTCTCCACTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRTKRSQRCQSLALWLQAHTQYS*SFSTRK Trigger: CTTCCTAGTGGAGAAAGACCAGGAATACTGTGTGTG...GGCCTGGAGCCAGAGAGCAAGGCTTTGGCATCTTTGAGACCTCTTGGTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CAA 72 bp | AGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTaGTGCTTCTCAGAGGGATGTGTGTACACAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQCEGYNARVIS*CFSEGCVYTVQ Trigger: CTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCTCATTCTTGGAGACTTaGCTAAAGCGAAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MSPPRQCEGYNARVISLCSFLET*LKRNSL Trigger: CAATGAGTTTCGCTTTAGCCAAGTCTCCAAGAATGA...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CAA 72 bp | TTGCCGAGAGAAGCGGATGACGTCGGGGAAGAGGACTaGGGATTGTTCCATAAGAAAATTTATGGATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPREADDVGEED*GLFHKKIYGCG Trigger: GCCACATCCATAAATTTTCTTATGGAACAATCCCAAGTCCTCTTCCCCGACGTCATCCGCTTCTCTCGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGAAGTTGGCCTTGTCCTaGAATATCTCCAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACHLLVLLRGMCVHSTVQKLALS*NISSCF Trigger: AAAGCAGCTGGAGATATTGCAGGACAAGGCCAACTT...CTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CAA 72 bp | AGAGAAGCGGATGACGTCGGGGAAGAGGACTTGGGATaGTTCCATAAGAAAATTTATGGATGTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: READDVGEEDLG*FHKKIYGCGLL Trigger: CAGAAGGCCACATCCATAAATTTTCTTATGGAACAATCCCAAGTCCTCTTCCCCGACGTCATCCGCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| 3UTR CAA 72 bp | GTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTaGAGAACCAAGAGGTCTCAAAGATGCCAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFWGVLISKQL*RTKRSQRCQSL Trigger: AAGGCTTTGGCATCTTTGAGACCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
||
| CDS TCA 90 bp | AAGCAACTCGGTCCCCTACCTGGCACAGGAAGGCACCCAGTGCTATaGCAAAGGCCACCGCCCATAGGGCCTGCCGTGGCCCTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KQLGPLPGTGRHPVL*QRPPPIGPAVALGP Trigger: GGGGCCCAGGGCCACGGCAGGCCCTATGGGCGGTGGCCTTTGTCATAGCACTGGGTGCCTTCCTGTGCCAGGTAGGGGACCGAGTTGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS GCA 90 bp | AGGAAGGCACCCAGTGCTATGACAAAGGCCACCGCCCATAGGGCCTaGCGTGGCCCTGGGCCCCCTTCCACAAAGACATGGCTGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RKAPSAMTKATAHRA*RGPGPPSTKTWLAP Trigger: CGGTGCCAGCCATGTCTTTGTGGAAGGGGGCCCAGGGCCACGGCAGGCCCTATGGGCGGTGGCCTTTGTCATAGCACTGGGTGCCTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS-3UTR CAA 90 bp | AGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTGGGTACCCACCGCCCAGCTGATGATCTCCAGGCCGTaGCCAGTCCCACCTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RPLSQGSGFWLWVPTAQLMISRP*PVPPFM Trigger: CATGAAAGGTGGGACTGGCAACGGCCTGGAGATCAT...CAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | AGCGGTGGGCCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAATTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SGGPGHQGEDWALGTPKKFLARY*AEALLG Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...TTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGGCCCACCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 90 bp | TGCCGTGGCCCTGGGCCCCCTTCCACAAAGACATGGCTGGCACCGTaGAGGGTACAACTGTTGGCAAAGGCCACCAAGTCCCTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRGPGPPSTKTWLAP*RVQLLAKATKSLGE Trigger: CTCACCTAGGGACTTGGTGGCCTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGTGGAAGGGGGCCCAGGGCCACGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS-3UTR CAA 90 bp | AGGCCACTGAGTCAGGGCTCCGGCTTCTGGCTGTGGGTACCCACCGCCCAGCTGCTACGGAAGTTGGCCTaGTCCTGCAATATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSQGSGFWLWVPTAQLLRKLA*SCNISS Trigger: GCTGGAGATATTGCAGGACAAGGCCAACTTCCGTAG...CAGCTGGGCGGTGGGTACCCACAGCCAGAAGCCGGAGCCCTGACTCAGTGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | CGGGAGGGCGGTTCTTGGAGACAAGAGGGAATGGAGGGGGAGACAAACAGGGCCCCGTGGCCGCCCATCTaGGCCCGAGTTGAATGTGTA | + |
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Preference number: 5 (lower is better) Translates to: REGGSWRQEGMEGETNRAPWPPI*ARVECV Trigger: TACACATTCAACTCGGGCCAAGATGGGCGGCCACGG...GGCCCTGTTTGTCTCCCCCTCCATTCCCTCTTGTCTCCAAGAACCGCCCTCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS GCA 90 bp | ACACAGCAGGACGGCCAGCGAACCCAGGAAACACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCGCTCATAGGAGAAGATGTGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: TQQDGQRTQETQGPQ*PLQRQPLIGEDVGK Trigger: CTTGCCCACATCTTCTCCTATGAGCGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGTTTCCTGGGTTCGCTGGCCGTCCTGCTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 90 bp | GCTCATAGGAGAAGATGTGGGCAAGACCGTGCAGCGTGGAGCTGCTaGCAAAAGCCTGGATGCTCACCGGCTGGACACCACCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHRRRCGQDRAAWSC*QKPGCSPAGHHPPP Trigger: AGGAGGTGGGTGGTGTCCAGCCGGTGAGCATCCAGGCTTTTGCCAGCAGCTCCACGCTGCACGGTCTTGCCCACATCTTCTCCTATGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 90 bp | GAGACAGCCGCTCATAGGAGAAGATGTGGGCAAGACCGTGCAGCGTaGAGCTGCTGGCAAAAGCCTGGATGCTCACCGGCTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETAAHRRRCGQDRAA*SCWQKPGCSPAGHH Trigger: GTGGTGTCCAGCCGGTGAGCATCCAGGCTTTTGCCAGCAGCTCCACGCTGCACGGTCTTGCCCACATCTTCTCCTATGAGCGGCTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 90 bp | ACGATGGAGATTAAAGGGCTCGCCCGAGAAAGCCTCTGGCCCAGGTaGAGCAAGGGGCACCCCAGGATCGTCACTCTCATCCAACCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TMEIKGLARESLWPR*SKGHPRIVTLIQPE Trigger: CTCGGGTTGGATGAGAGTGACGATCCTGGGGTGCCCCTTGCTCCACCTGGGCCAGAGGCTTTCTCGGGCGAGCCCTTTAATCTCCATCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAAGAAAGGCCAGGTATCTCATACCTGTaGTTGAGCAGGGCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGHQGEDWALGTPKKERPGISYL*LSRASS Trigger: ACTGCTGGCCCTGCTCAACAACAGGTATGAGATACC...TGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 90 bp | GTTGTAGAAACGATGGAGATTAAAGGGCTCGCCCGAGAAAGCCTCTaGCCCAGGTGGAGCAAGGGGCACCCCAGGATCGTCACTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VVETMEIKGLARESL*PRWSKGHPRIVTLI Trigger: GATGAGAGTGACGATCCTGGGGTGCCCCTTGCTCCACCTGGGCCAGAGGCTTTCTCGGGCGAGCCCTTTAATCTCCATCGTTTCTACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS TCA 90 bp | GCTCTGTGGTGGCCACTTCATCTAGCAAAGTCACGTGCGGGTAGCTaGGGTAATAAGCAACTCGGTCCCCTACCTGGCACAGGAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALWWPLHLAKSRAGS*GNKQLGPLPGTGRH Trigger: GTGCCTTCCTGTGCCAGGTAGGGGACCGAGTTGCTTATTACCTCAGCTACCCGCACGTGACTTTGCTAGATGAAGTGGCCACCACAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 90 bp | AAGACCACTTTGAAGTCTTCAGCGCTGCAGGCCTCCCCTCGGAAGTaGCACGAGAGAAGCATGTCTCGAATGTCATGCCCTGCTCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KTTLKSSALQASPRK*HERSMSRMSCPALS Trigger: CGACAGAGCAGGGCATGACATTCGAGACATGCTTCTCTCGTGCCACTTCCGAGGGGAGGCCTGCAGCGCTGAAGACTTCAAAGTGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS GCA 90 bp | CCCTCGGAAGTGGCACGAGAGAAGCATGTCTCGAATGTCATGCCCTaGTCTGTCGTAGAACTCACGCATGTTGAAGGGCTTGGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSEVAREKHVSNVMP*SVVELTHVEGLGLE Trigger: TTCAAGCCCAAGCCCTTCAACATGCGTGAGTTCTACGACAGAGCAGGGCATGACATTCGAGACATGCTTCTCTCGTGCCACTTCCGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | CCTGGGCATCAAGGTGAGGACTGGGCCCTGGGCACCCCGAAGAAAGAAAGGCCATACTGTTCAGATTTGTaGAACTTCTTGGCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGHQGEDWALGTPKKERPYCSDL*NFLARY Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAACAGTA...TGGCCTTTCTTTCTTCGGGGTGCCCAGGGCCCAGTCCTCACCTTGATGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCCAGGGATTGTGTCTTTaGACGTCATCCAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSPPRQCEGYNARVISLCQGLCL*TSSRLS Trigger: GCTCAGCCTGGATGACGTCAAAAGACACAATCCCTG...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | ATGTCGCCACCGAGACAGTGCGAAGGTTACAATGCGCGTGTCATCTCCTTGTGCCTGTGGATCTGCACTTaGATGCCTGCTTCGAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: MSPPRQCEGYNARVISLCLWICT*MPASND Trigger: ATCGTTCGAAGCAGGCATCAAAGTGCAGATCCACAG...GCACAAGGAGATGACACGCGCATTGTAACCTTCGCACTGTCTCGGTGGCGACAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | GGAGTCCCAATCTCTACTTCTTCAGGAAATCCTCTGCCCCGTAAAGATTCCGTACGCATGTTGAAGGGCTaGGGCTTGAAGCTACGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPISTSSGNPLPRKDSVRMLKG*GLKLRK Trigger: CTTCCGTAGCTTCAAGCCCAAGCCCTTCAACATGCG...TACGGAATCTTTACGGGGCAGAGGATTTCCTGAAGAAGTAGAGATTGGGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | CCTGTTTCTTTCTGGGGAGTTCTGATCTCTAAACAACTCTTGAGAACCAAGAGGCGCGTGAAGACCACTTaGAAGTCTTCAGCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVSFWGVLISKQLLRTKRRVKTT*KSSALQ Trigger: CTGCAGCGCTGAAGACTTCAAAGTGGTCTTCACGCG...CCTCTTGGTTCTCAAGAGTTGTTTAGAGATCAGAACTCCCCAGAAAGAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | TTACAATGCGCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTTGGTACAGGTCATTCTaGGAGACTTGGCTAAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LQCACHLLVLLRGMCVHSWYRSF*ETWLKR Trigger: TCGCTTTAGCCAAGTCTCCAAGAATGACCTGTACCA...ACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGCGCATTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS-3UTR CAA 90 bp | GCGTGTCATCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGTACAGGTCATTCTTGGAGACTaGGCTAAAGCGAAACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ACHLLVLLRGMCVHSTVQVILGD*AKAKLI Trigger: AATGAGTTTCGCTTTAGCCAAGTCTCCAAGAATGAC...CTGTACTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGATGACACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS TCA 72 bp | GGTCCCCTACCTGGCACAGGAAGGCACCCAGTGCTATaGCAAAGGCCACCGCCCATAGGGCCTGCCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPLPGTGRHPVL*QRPPPIGPAVA Trigger: GGCCACGGCAGGCCCTATGGGCGGTGGCCTTTGTCATAGCACTGGGTGCCTTCCTGTGCCAGGTAGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS GCA 72 bp | CCCAGTGCTATGACAAAGGCCACCGCCCATAGGGCCTaGCGTGGCCCTGGGCCCCCTTCCACAAAGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAMTKATAHRA*RGPGPPSTKTW Trigger: CCATGTCTTTGTGGAAGGGGGCCCAGGGCCACGGCAGGCCCTATGGGCGGTGGCCTTTGTCATAGCACTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | GCCGTGGCCCTGGGCCCCCTTCCACAAAGACATGGCTaGCACCGTGGAGGGTACAACTGTTGGCAAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVALGPLPQRHG*HRGGYNCWQRP Trigger: TGGCCTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGTGGAAGGGGGCCCAGGGCCACGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | GCCTGCCGTGGCCCTGGGCCCCCTTCCACAAAGACATaGCTGGCACCGTGGAGGGTACAACTGTTGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ACRGPGPPSTKT*LAPWRVQLLAK Trigger: CTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGTGGAAGGGGGCCCAGGGCCACGGCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | TCCGATTCTGAGCTGTCCTGCTGCTGCCGGTGGTGGTaGTGGGGACCCCAGATATCTCCCATGGATCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDSELSCCCRWW*WGPQISPMDPG Trigger: CCCAGGATCCATGGGAGATATCTGGGGTCCCCACCACCACCACCGGCAGCAGCAGGACAGCTCAGAATCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | ACGATGGAGATTAAAGGGCTCGCCCGAGAAAGCCTCTaGCCCAGGTGGAGCAAGGGGCACCCCAGGATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TMEIKGLARESL*PRWSKGHPRIV Trigger: GACGATCCTGGGGTGCCCCTTGCTCCACCTGGGCCAGAGGCTTTCTCGGGCGAGCCCTTTAATCTCCATCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS GCA 72 bp | GACGGCCAGCGAACCCAGGAAACACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCGCTCATAGGAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGQRTQETQGPQ*PLQRQPLIGED Trigger: ATCTTCTCCTATGAGCGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGTTTCCTGGGTTCGCTGGCCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 72 bp | AGAAGATGTGGGCAAGACCGTGCAGCGTGGAGCTGCTaGCAAAAGCCTGGATGCTCACCGGCTGGACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRCGQDRAAWSC*QKPGCSPAGHH Trigger: GTGGTGTCCAGCCGGTGAGCATCCAGGCTTTTGCCAGCAGCTCCACGCTGCACGGTCTTGCCCACATCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 72 bp | CCTGGGCCCCCTTCCACAAAGACATGGCTGGCACCGTaGAGGGTACAACTGTTGGCAAAGGCCACCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGPPSTKTWLAP*RVQLLAKATKS Trigger: GGACTTGGTGGCCTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGTGGAAGGGGGCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | ATTAAAGGGCTCGCCCGAGAAAGCCTCTGGCCCAGGTaGAGCAAGGGGCACCCCAGGATCGTCACTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: IKGLARESLWPR*SKGHPRIVTLI Trigger: GATGAGAGTGACGATCCTGGGGTGCCCCTTGCTCCACCTGGGCCAGAGGCTTTCTCGGGCGAGCCCTTTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS GCA 72 bp | CGTGGTGGTAGCAGAAGTAGTACTGCACACGCTCAGTaGACACACACAGCAGGACGGCCAGCGAACCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGGSRSSTAHAQ*THTAGRPANPG Trigger: TCCTGGGTTCGCTGGCCGTCCTGCTGTGTGTGTGCACTGAGCGTGTGCAGTACTACTTCTGCTACCACCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CCA 72 bp | GCTCATAGGAGAAGATGTGGGCAAGACCGTGCAGCGTaGAGCTGCTGGCAAAAGCCTGGATGCTCACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHRRRCGQDRAA*SCWQKPGCSPA Trigger: AGCCGGTGAGCATCCAGGCTTTTGCCAGCAGCTCCACGCTGCACGGTCTTGCCCACATCTTCTCCTATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CAA 90 bp | CCCCCTTCCACAAAGACATGGCTGGCACCGTGGAGGGTACAACTGTaGGCAAAGGCCACCAAGTCCCTAGGTGAGTCACCCTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPSTKTWLAPWRVQL*AKATKSLGESPSSS Trigger: GCTGGATGAGGGTGACTCACCTAGGGACTTGGTGGCCTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGTGGAAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CAA 72 bp | GGATGTCCTCGGAGGCTCTCGCAGGGATTGTGTCTTTaGACGTCATCCAGGCTGAGCGCCACGCCCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GCPRRLSQGLCL*TSSRLSATPLS Trigger: AGATAAGGGCGTGGCGCTCAGCCTGGATGACGTCAAAAGACACAATCCCTGCGAGAGCCTCCGAGGACATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023758.9 ENSMUST00000228185.2 |
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| CDS GCA 72 bp | TCCTTCTCTTCTTCTTCTTCCGATTCTGAGCTGTCCTaGTGCTGCCGGTGGTGGTGGTGGGGACCCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: SFSSSSSDSELS*CCRWWWWGPQI Trigger: TATCTGGGGTCCCCACCACCACCACCGGCAGCAGCAGGACAGCTCAGAATCGGAAGAAGAAGAAGAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | TTGAAGTCTTCAGCGCTGCAGGCCTCCCCTCGGAAGTaGCACGAGAGAAGCATGTCTCGAATGTCATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKSSALQASPRK*HERSMSRMSCP Trigger: AGGGCATGACATTCGAGACATGCTTCTCTCGTGCCACTTCCGAGGGGAGGCCTGCAGCGCTGAAGACTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CAA 72 bp | ACAAAGACATGGCTGGCACCGTGGAGGGTACAACTGTaGGCAAAGGCCACCAAGTCCCTAGGTGAGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: TKTWLAPWRVQL*AKATKSLGESP Trigger: GGGTGACTCACCTAGGGACTTGGTGGCCTTTGCCAACAGTTGTACCCTCCACGGTGCCAGCCATGTCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS CCA 72 bp | ACGCCCTTATCTGCGCTGTTCCTCTTAGCCTCCTTCTaGCACTTCCCACGTCTACACAGCCGGTGCTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: TPLSALFLLASF*HFPRLHSRCLM Trigger: CATTAAGCACCGGCTGTGTAGACGTGGGAAGTGCCAGAAGGAGGCTAAGAGGAACAGCGCAGATAAGGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023758.9 ENSMUST00000228185.2 |
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| CDS TCA 72 bp | CCAGGTAACGGGTTTCACAATCAATCCGGCAGGCCGTaGTGCTGTAGGAGTCGAAGAAATCCGAGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PGNGFHNQSGRP*CCRSRRNPSPW Trigger: CCATGGACTCGGATTTCTTCGACTCCTACAGCATCACGGCCTGCCGGATTGATTGTGAAACCCGTTACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023758.9 ENSMUST00000228185.2 |
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| CDS TCA 72 bp | TGGCCACTTCATCTAGCAAAGTCACGTGCGGGTAGCTaGGGTAATAAGCAACTCGGTCCCCTACCTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: WPLHLAKSRAGS*GNKQLGPLPGT Trigger: TGTGCCAGGTAGGGGACCGAGTTGCTTATTACCTCAGCTACCCGCACGTGACTTTGCTAGATGAAGTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228185.2 |
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| CDS GCA 72 bp | GTGGCACGAGAGAAGCATGTCTCGAATGTCATGCCCTaGTCTGTCGTAGAACTCACGCATGTTGAAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VAREKHVSNVMP*SVVELTHVEGL Trigger: AAGCCCTTCAACATGCGTGAGTTCTACGACAGAGCAGGGCATGACATTCGAGACATGCTTCTCTCGTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CAA 72 bp | AGGTCATTCTTGGAGACTTGGCTAAAGCGAAACTCATaGAGGTTGCAGAGAGTGACGGCAGGGAAGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSFLETWLKRNS*RLQRVTAGKVS Trigger: GCTCACCTTCCCTGCCGTCACTCTCTGCAACCTCAATGAGTTTCGCTTTAGCCAAGTCTCCAAGAATGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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| CDS CAA 72 bp | CGCATGTTGAAGGGCTTGGGCTTGAAGCTACGGAAGTaGGCCTTGTCCTGCAATATCTCCAGCTGCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMLKGLGLKLRK*ALSCNISSCFS Trigger: TGAAAAGCAGCTGGAGATATTGCAGGACAAGGCCAACTTCCGTAGCTTCAAGCCCAAGCCCTTCAACATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023758.9 |
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