RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASH1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028053

Ensembl transcript IDs: ENSMUST00000090933.5, ENSMUST00000186583.7

Found 674 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATAAACGGGGCAGGCTGGGTCCGGACCCTTCCCTTTGGAAGTGCTaGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: DKRGRLGPDPSLWKC*KVPVASGYSKCGPP
Trigger: AGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTCCAAAGGGAAGGGTCCGGACCCAGCCTGCCCCGTTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTaGCCCGCATTTCGAACACCAAAACCCACCTGGCAGCTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: DMQTNSVSICSDVVL*PAFRTPKPTWQLGV
Trigger: AACCCCCAGCTGCCAGGTGGGTTTTGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR TCA 90 bp ACAGTATGGTCTGGTAACTTCTGGTCAAGAGACTGGGTGAGAAGGTaGCCCTGGCTATACCTCCTGATGATGAAGTCATTCAGAAAGGTG +
Preference number: 1 (lower is better)
Translates to: TVWSGNFWSRDWVRR*PWLYLLMMKSFRKV
Trigger: CACCTTTCTGAATGACTTCATCATCAGGAGGTATAGCCAGGGTCACCTTCTCACCCAGTCTCTTGACCAGAAGTTACCAGACCATACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 90 bp GCAATCACACAGCCTACAGACATGCAGACTAACTCTGTATCTATTTaGAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAAACCC +
Preference number: 1 (lower is better)
Translates to: AITQPTDMQTNSVSI*SDVVLCPAFRTPKP
Trigger: GGGTTTTGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTCTGTAGGCTGTGTGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTCAAGAGACTGGGTaGGAAGGTGACCCTGGCTAT +
Preference number: 2 (lower is better)
Translates to: LGHALPSATREHLIPRSRGQETG*EGDPGY
Trigger: ATAGCCAGGGTCACCTTCTCACCCAGTCTCTTGACC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGCTCAAGGGGATCTATaGCATCCCCTCTTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: ALPSATREHLIPRSRGNVAQGDL*HPLFLS
Trigger: AGAGAGAAAGAGGGGATGGCATAGATCCCCTTGAGC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTCTAGTACTTTGACCTaGTTGGGCAAGAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LGHALPSATREHLIPRSRSSTLT*LGKKGE
Trigger: TTCTCCCTTCTTGCCCAACCAGGTCAAAGTACTAGA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCAAGAGGCTGGACTTaGTGGTGCCGTTGGATCCCA +
Preference number: 2 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSARGWT*WCRWIP
Trigger: TGGGATCCAACGGCACCATCAAGTCCAGCCTCTTGC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACCTTCCCTTTGGAAGTaGTGGAAAGTACCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRPSLWK*WKVPVA
Trigger: AGCTACTGGTACTTTCCAGCACTTCCAAAGGGAAGG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATGTAAAGAGACAGTATaGTCTGGTAACTTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: ALPSATREHLIPRSRGNVCKETV*SGNFWS
Trigger: TGACCAGAAGTTACCAGACCATACTGTCTCTTTACA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGAGAAGCAGCATGTGTaGTGGCGGGGGCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPEKQHV*WRGLGF
Trigger: AAAGCCCAGCCCCCGCCAGCACACATGCTGCTTCTC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACAGTGGGCTTGGCCATaGGCTCCCCAGCGCCACGCG +
Preference number: 2 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLQWAWP*APQRHA
Trigger: CGCGTGGCGCTGGGGAGCGCATGGCCAAGCCCACTG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAAGCAGCATGTGTGCTaGCGGGGGCTGGGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPKQHVC*RGLGFL
Trigger: GAGAAAGCCCAGCCCCCGCCAGCACACATGCTGCTT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTCTAGTACTTTGACCTaGTTGGGCAAGAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LYSGNRGRESGSSSKCSESSTLT*LGKKGE
Trigger: TTCTCCCTTCTTGCCCAACCAGGTCAAAGTACTAGA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCCCTTCGGACCCCATaGGGGCCTCTCCGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHALRTP*GPLRLP
Trigger: AGGGAGGCGGAGAGGCCCCCATGGGGTCCGAAGGGC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATGTGCTGGCGGGGGCTaGGCTTTCTCAGGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPCAGGG*AFSGGK
Trigger: TTTTCCTCCTGAGAAAGCCCAGCCCCCGCCAGCACA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGCAAGAGGCTGGACTTaGTGGTGCCGTTGGATCCCA +
Preference number: 2 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTARGWT*WCRWIP
Trigger: TGGGATCCAACGGCACCATCAAGTCCAGCCTCTTGC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTCCCTTTGGAAGTGCTaGAAAGTACCAGTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSSLWKC*KVPVAS
Trigger: AGAAGCTACTGGTACTTTCCAGCACTTCCAAAGGGA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGAGAAGCAGCATGTGTaGTGGCGGGGGCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLEKQHV*WRGLGF
Trigger: AAAGCCCAGCCCCCGCCAGCACACATGCTGCTTCTC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATGGTCTGGTAACTTCTaGTCAAGAGACTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPWSGNF*SRDWVR
Trigger: TCTCACCCAGTCTCTTGACCAGAAGTTACCAGACCA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAAGAAACCACTCCAGTaGGCTTGGCCATGCGCTCCC +
Preference number: 2 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHKKPLQ*AWPCAP
Trigger: GGGAGCGCATGGCCAAGCCCACTGGAGTGGTTTCTT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCCTTCCCTTTGGAAGTaGTGGAAAGTACCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTPSLWK*WKVPVA
Trigger: AGCTACTGGTACTTTCCAGCACTTCCAAAGGGAAGG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CAA 90 bp GGTCCAGTATTGGAAAAGAGTAATGAAGATGTGTTTACTAATGTATaGCTTACCAATCTCACAGCATACACACACACACACACACGCGCA +
Preference number: 2 (lower is better)
Translates to: GPVLEKSNEDVFTNV*LTNLTAYTHTHTRA
Trigger: TGCGCGTGTGTGTGTGTGTGTGTATGCTGTGAGATTGGTAAGCAATACATTAGTAAACACATCTTCATTACTCTTTTCCAATACTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATACACCAAAACCCACCTaGCAGCTGGGGGTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHTPKPT*QLGVVF
Trigger: AAAAACAACCCCCAGCTGCCAGGTGGGTTTTGGTGT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCATGTTCTAGTACTTTaGCCTGGTTGGGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHHVLVL*PGWARR
Trigger: CCTTCTTGCCCAACCAGGTCAAAGTACTAGAACATG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACATGTTCTAGTACTTTaGCCTGGTTGGGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSHVLVL*PGWARR
Trigger: CCTTCTTGCCCAACCAGGTCAAAGTACTAGAACATG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CAA 90 bp AGCGTCGTCATCATAAGGGGAAGGAAATGTACAGTTAGGACATCATaGGTCCAGTATTGGAAAAGAGTAATGAAGATGTGTTTACTAATG +
Preference number: 2 (lower is better)
Translates to: SVVIIRGRKCTVRTS*VQYWKRVMKMCLLM
Trigger: CATTAGTAAACACATCTTCATTACTCTTTTCCAATACTGGACCAATGATGTCCTAACTGTACATTTCCTTCCCCTTATGATGACGACGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAGTCATTCAGAAAGGTaGAAGGAAAATGGGACTCGT +
Preference number: 2 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFSHSER*KENGTR
Trigger: ACGAGTCCCATTTTCCTTCCACCTTTCTGAATGACT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCGTGGTAATGTACAATaGTTCTCTACAGTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFRGNVQ*FSTVRK
Trigger: TTTTCTTACTGTAGAGAAGCATTGTACATTACCACG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR TCA 72 bp GCCCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTaGTGGTGCCGTTGGATCCCAGGTGCTCGCTCGCGG +
Preference number: 3 (lower is better)
Translates to: APVHVQRARGWT*WCRWIPGARSR
Trigger: CCGCGAGCGAGCACCTGGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGACTTGATGGTGCCGTaGGATCCCAGGTGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: ALPSATREHLIPRSRGNVDLMVP*DPRCSL
Trigger: GAGCGAGCACCTGGGATCCAACGGCACCATCAAGTC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR TCA 72 bp GACCCCATGGGGGCCTCTCCGCCTCCCTGGTTCTACTaGCTCTACTCTGGGAACAGAGGTAGGGAGAGTGGC +
Preference number: 3 (lower is better)
Translates to: DPMGASPPPWFY*LYSGNRGRESG
Trigger: GCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGGCCCCCATGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAAGTACTTTGACCTGGTaGGGCAAGAAGGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: ALPSATREHLIPRSRGNVSTLTW*GKKGER
Trigger: TCTTTCTCCCTTCTTGCCCAACCAGGTCAAAGTACT...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CCA 72 bp GGCAGGCTGGGTCCGGACCCTTCCCTTTGGAAGTGCTaGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGT +
Preference number: 3 (lower is better)
Translates to: GRLGPDPSLWKC*KVPVASGYSKC
Trigger: ACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTCCAAAGGGAAGGGTCCGGACCCAGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CCA 72 bp CACAGGAAGAGAAGCAGCATGTGTGCTGGCGGGGGCTaGGCTTTCTCAGGAGGAAAAAGTATGTTCGGCAGG +
Preference number: 3 (lower is better)
Translates to: HRKRSSMCAGGG*AFSGGKSMFGR
Trigger: CCTGCCGAACATACTTTTTCCTCCTGAGAAAGCCCAGCCCCCGCCAGCACACATGCTGCTTCTCTTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATCATGTTCTAGTACTTaGACCTGGTTGGGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: ALPSATREHLIPRSRGNVSCSST*TWLGKK
Trigger: CTTCTTGCCCAACCAGGTCAAAGTACTAGAACATGA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGTGTTTACTAATGTATaGCTTACCAATCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: ALPSATREHLIPRSRGNVVFTNV*LTNLTA
Trigger: TGCTGTGAGATTGGTAAGCAATACATTAGTAAACAC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATCCGGACCCTTCCCTTaGGAAGTGCTGGAAAGTACC +
Preference number: 3 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPSGPFP*EVLEST
Trigger: GGTACTTTCCAGCACTTCCAAAGGGAAGGGTCCGGA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR TCA 72 bp TCTGGTAACTTCTGGTCAAGAGACTGGGTGAGAAGGTaGCCCTGGCTATACCTCCTGATGATGAAGTCATTC +
Preference number: 3 (lower is better)
Translates to: SGNFWSRDWVRR*PWLYLLMMKSF
Trigger: GAATGACTTCATCATCAGGAGGTATAGCCAGGGTCACCTTCTCACCCAGTCTCTTGACCAGAAGTTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 72 bp ACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTaGCCCGCATTTCGAACACCAAAACCCACCTGGCAG +
Preference number: 3 (lower is better)
Translates to: TNSVSICSDVVL*PAFRTPKPTWQ
Trigger: CTGCCAGGTGGGTTTTGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGACTTGATGGTGCCGTaGGATCCCAGGTGCTCGCTC +
Preference number: 3 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHDLMVP*DPRCSL
Trigger: GAGCGAGCACCTGGGATCCAACGGCACCATCAAGTC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 72 bp CAGCCTACAGACATGCAGACTAACTCTGTATCTATTTaGAGTGATGTAGTGCTTTGCCCCGCATTTCGAACA +
Preference number: 3 (lower is better)
Translates to: QPTDMQTNSVSI*SDVVLCPAFRT
Trigger: TGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTCTGTAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTGGACGTGAATCTTTaGCACAGCAGACACACAGGA +
Preference number: 3 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLDVNL*HSRHTG
Trigger: TCCTGTGTGTCTGCTGTGCAAAAGATTCACGTCCAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 72 bp GAGCATCTCATACCCAGGTCTCGTGGTAATGTACAATaGTTCTCTACAGTAAGAAAATACTCCAAACTATTT +
Preference number: 3 (lower is better)
Translates to: EHLIPRSRGNVQ*FSTVRKYSKLF
Trigger: AAATAGTTTGGAGTATTTTCTTACTGTAGAGAAGCATTGTACATTACCACGAGACCTGGGTATGAGATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGTGTTTACTAATGTATaGCTTACCAATCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLVFTNV*LTNLTA
Trigger: TGCTGTGAGATTGGTAAGCAATACATTAGTAAACAC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR GCA 72 bp TGGAAAAGAGTAATGAAGATGTGTTTACTAATGTATTaGTTACCAATCTCACAGCATACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: WKRVMKMCLLMY*LPISQHTHTHT
Trigger: TGTGTGTGTGTGTGTATGCTGTGAGATTGGTAAGCAATACATTAGTAAACACATCTTCATTACTCTTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTGGCCATCAGGCGTaGGCCGACTGTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRGGHQA*ADCPSS
Trigger: TGATGAGGGACAGTCGGCGCACGCCTGATGGCCACC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGGCACTTCCCTGGCTaGTTGCTCCTGACTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRGHFPG*LLLTSQ
Trigger: CTGGCTAGTCAGGAGCAAGCAGCCAGGGAAGTGCCC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAGCAGCTGTAAGGGGTaGGGGAGAGTAAGGCATGCC +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRSSCKG*GRVRHA
Trigger: GGCATGCCTTACTCTCCCTCACCCCTTACAGCTGCT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCCCCAATGTCCCCAGTaGCTCTTTCCTGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRPQCPQ*LFPGLA
Trigger: AGCCAGACCAGGAAAGAGCCACTGGGGACATTGGGG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCTGGCTGCTTGCTCCTaGCTAGCCAGTACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRLAACS*LASTSS
Trigger: TGAAGAGGTACTGGCTAGTCAGGAGCAAGCAGCCAG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CAA 72 bp TGCCCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTaGATGGTGCCGTTGGATCCCAGGTGCTCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: CPSPCPESKRLD*MVPLDPRCSLA
Trigger: CGCGAGCGAGCACCTGGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGTGTCTGGACTTAGGTaGAGGGACATGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRVSGLR*RDMSSP
Trigger: AGGCGAAGACATGTCCCTGCACCTAAGTCCAGACAC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACCGTGTTCACACCCATaGAGTCGCAGTGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVPCSHP*SRSAAT
Trigger: TGTGGCAGCACTGCGACTGCATGGGTGTGAACACGG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTATTGACACCACTGCTTaGAGGGGGCATTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRIDTTA*RGHFRG
Trigger: ACCTCGGAAATGCCCCCTCCAAGCAGTGGTGTCAAT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGGCTCTTTCCTGGTCTaGCTCCTCAGGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPGSFLV*LLRAGH
Trigger: GTGCCCAGCCCTGAGGAGCCAGACCAGGAAAGAGCC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCATCACAGATCTCTTTaGAGATCTGTGCTAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRHHRSL*RSVLGA
Trigger: CGCGCCTAGCACAGATCTTCAAAGAGATCTGTGATG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCGGCCTCCAAGGGAATaGTCTCATAGAGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPRPPRE*SHRGAP
Trigger: GGGTGCCCCTCTATGAGATCATTCCCTTGGAGGCCG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAACATGAATGGGCGCTaGGAACAACCCATACTCGTG +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRNMNGR*EQPILV
Trigger: CACGAGTATGGGTTGTTCCCAGCGCCCATTCATGTT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTAGGACTGACGGACTaGGTGGCCATCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRVGLTD*VAIRRA
Trigger: CGCACGCCTGATGGCCACCCAGTCCGTCAGTCCTAC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGAGGCACCTCCTATTTaGAAGTCAGGAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSREAPPI*KSGEVQ
Trigger: TTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGTGGCAGTGGAGTGGTaGATGAAGGAGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPVAVEW*MKEMVA
Trigger: CGCCACCATCTCCTTCATTCACCACTCCACTGCCAC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGGCACCCTCTATCTCTaGTTCTCTTTTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVGTLYL*FSFAGQ
Trigger: CTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAACTGGAGACCTCATCTaGCTCTTAGGCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVTGDLI*LLGLPL
Trigger: AAGAGGCAGGCCTAAGAGGCAGATGAGGTCTCCAGT...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACTGGCAGTGTTTGTCTaGTGCAGTGACTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVLAVFV*CSDCTK
Trigger: CTTGGTGCAGTCACTGCACCAGACAAACACTGCCAG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCACTGTCACTGGGAATaGTCTCGTCACTATGAGACT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRHCHWE*SRHYET
Trigger: AGTCTCATAGTGACGAGACCATTCCCAGTGACAGTG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGCGGTGGATAAAGAGTaGGGGGATACCTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRAVDKE*GDTFHN
Trigger: ATTATGGAAGGTATCCCCCCACTCTTTATCCACCGC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTTTGGGTCACAGCTGTaGTTGATGAATCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRFGSQL*LMNLAS
Trigger: TGAGGCCAGATTCATCAACCACAGCTGTGACCCAAA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGTGGAGTGGTaGATGAAGGAGATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRVAVEW*MKEMVA
Trigger: CGCCACCATCTCCTTCATTCACCACTCCACTGCCAC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAGTCTCTTTTGGGAGTaGGCTTCTTGGGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRSLFWE*ASWGND
Trigger: ATCATTTCCCCAAGAAGCTCACTCCCAAAAGAGACT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACTGCCCTGTCTGGAGTaGACATGCAAATATGGCACT +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVLPCLE*TCKYGT
Trigger: AGTGCCATATTTGCATGTGCACTCCAGACAGGGCAG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTACGCTGGGGTAGGTaGTCATGGAAAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRVRWGR*SWKGEG
Trigger: CCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTAC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGAGGTCGACCTGGTCTaGGTTTCACAAAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSREVDLV*VSQNCF
Trigger: GAAACAATTTTGTGAAACGCAGACCAGGTCGACCTC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTGGATGTCACGGGTGTaGTTCACCTCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPWMSRV*FTSSCF
Trigger: GAAGCAGGAGGAGGTGAAGCACACCCGTGACATCCA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGTTTTCCTCTGCAGCTaGCAAGCGTCTTGTTCGAAC +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVVFLCS*QASCSN
Trigger: GTTCGAACAAGACGCTTGGCAGCTGCAGAGGAAAAC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACCCATGCAGTCGCAGTaGTGCCACACCATGCACTTG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRPMQSQ*CHTMHL
Trigger: CAAGTGCATGGTGTGGCAGCACTGCGACTGCATGGG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCACATTTTCCGAGCTTaGCGTTGCATAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRHIFRA*RCIAST
Trigger: AGTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCCTGGTGTCGTCATCTaGCTTCTTACAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRPGVVI*LLTITG
Trigger: ACCTGTAATTGTAAGAAGCCAGATGACGACACCAGG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAGGTTGAGCAGGATCTaGTTGAGCCGTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPRLSRI*LSRSLW
Trigger: CCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
3UTR CAA 72 bp TGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTaGGATCCCAGGTGCTCGCTCGCGGTTCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: CPESKRLDLMVP*DPRCSLAVLIL
Trigger: AAGGATGAGAACCGCGAGCGAGCACCTGGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTATTACTTTCCCCCTGTaGATGAAGATGGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRITFPL*MKMDAF
Trigger: GAAAGCATCCATCTTCATTCACAGGGGGAAAGTAAT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAACCAATCCCATTGCTaGGCTTGCTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRNQSHC*ACYNLL
Trigger: AAGAAGATTGTAGCAAGCTCAGCAATGGGATTGGTT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCTACTAACAGGGCTCTaGCCTCCACTAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLLTGL*PPLVPE
Trigger: TTCTGGGACTAGTGGAGGTCAGAGCCCTGTTAGTAG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCTTCTTTCAGGGATGTaGGTTCACTCAAATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRLLSGM*VHSNEK
Trigger: CTTCTCATTTGAGTGAACTCACATCCCTGAAAGAAG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATCTCGGGGAATAAAATaGTGGCTTCGATGGGTGATC +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVSRGIK*WLRWVI
Trigger: GATCACCCATCGAAGCCATCATTTTATTCCCCGAGA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCCTTTCCTGCTTCTGTaGCCCTTTCTCGATTCCGCT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPPFLLL*PFLDSA
Trigger: AGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCACTGGAGACCTCATCTaGCTCTTAGGCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPTGDLI*LLGLPL
Trigger: AAGAGGCAGGCCTAAGAGGCAGATGAGGTCTCCAGT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTAAGGCTCGCTCCTTaGTGTAGCTATGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLRLAP*CSYGLD
Trigger: GTCCAGGCCATAGCTACAGCAAGGAGCGAGCCTTAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTATAGAGCCAACACCTaGTTTCCTGATCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRYRANT*FPDQVL
Trigger: AAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGCTGTAGCTATGGCCTaGACTGGAAGAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRAVAMA*TGRRWC
Trigger: GCACCACCTTCTTCCAGTCCAGGCCATAGCTACAGC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTCCAGGTTTTTCTTaGTGGCCAAGATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRGPGFS*WPRFCH
Trigger: ATGACAAAATCTTGGCCACCAAGAAAAACCTGGACC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAACAAACTGGGCGGCCTaGAAGGCTTGCATTGACACC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRTNWAA*KACIDT
Trigger: GGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAGTTCCTCTCTCTGTTaGACATTGGCTTCATCTGTA +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRSSSLC*TLASSV
Trigger: TACAGATGAAGCCAATGTCCAACAGAGAGAGGAACT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGGGAAGATTCAAAAGTaGAGCTGCAAGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVGKIQK*SCKGLL
Trigger: CAGCAAACCCTTGCAGCTCCACTTTTGAATCTTCCC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACAAAGGCATAGGGTTTaGTGCAGACCGGATATCGAT +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVQRHRV*CRPDID
Trigger: ATCGATATCCGGTCTGCACCAAACCCTATGCCTTTG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATTCATTGCAAGAGTCTaGATCATACTGCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVFIARV*IILPCL
Trigger: CAGACAGGGCAGTATGATTCAGACTCTTGCAATGAA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCTTTTCTCGTGGGATaGGAGCCAGCACAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSFLVG*EPAQVA
Trigger: TGCAACCTGTGCTGGCTCTCATCCCACGAGAAAAGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCTGGAACAATACCAATaGCTAGCTTCTTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRLEQYQ*LASFLI
Trigger: AATCAGGAAAGAAGCTAGGCATTGGTATTGTTCCAG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAGACTGAGGTCTCGCTaGTGTCGGCCTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSRLRSR*CRPHWP
Trigger: CGGCCAGTGAGGCCGACAGCAGCGAGACCTCAGTCT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCCCATGCAGTCGCAGTaGTGCCACACCATGCACTTG +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEPMQSQ*CHTMHL
Trigger: CAAGTGCATGGTGTGGCAGCACTGCGACTGCATGGG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCGTTCCCTCTGGCTGTaGCTTCGCTCCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCRSLWL*LRSSGV
Trigger: CACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATACTTGGACTTTCAGTaGCAACAAATGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVYLDFQ*QQMEPL
Trigger: CAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGCCGCCTTCTGCCCTTaGAAGCCTTCTTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRAAFCP*KPSSLQ
Trigger: TTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTATCGGAAGCTGACTaGGAACCTGCCAACGACTGT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLSEAD*EPANDC
Trigger: ACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTATTCAATGATGAACTaGCCAGCTTTTAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRYSMMN*PAFRGS
Trigger: AGAACCCCTAAAAGCTGGCCAGTTCATCATTGAATA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGAC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPCRAEN*VMKTSD
Trigger: GTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAACAGATACAGTAGGTaGCGAGGAAGGAAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPNRYSR*RGRKVA
Trigger: AGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCTAGTCCCAGAAGACTaGGAGCAAATAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLVPED*EQIGDG
Trigger: TCCATCACCTATTTGCTCTCAGTCTTCTGGGACTAG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACCTCTAGTTCTGCGATaGAGTCTGGATCCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRPLVLR*SLDPAY
Trigger: ATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCTGGAAGGCTTGCATTaGCACCACTGCTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCLEGLH*HHCLEG
Trigger: CCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATCTTATGTTCTGAAGTaGGGTTCACACTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVSYVLK*GSHSEP
Trigger: TGGTTCAGAGTGTGAACCTCACTTCAGAACATAAGA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCACCTCCTCCTGCTTCTaGTGGATCTTTTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPTSSCF*WIFSQF
Trigger: AAACTGGGAAAAGATCCATCAGAAGCAGGAGGAGGT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTACACACAATCACCCTaGCGAAGCAGCAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPYTQSP*RSSKSS
Trigger: AGATGACTTGCTGCTTCGTCAGGGTGATTGTGTGTA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCTCTGCTTCTCTTTTaGTGGCCAGAGTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSLLLF*WPECQD
Trigger: ATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTTCTCGATTCCGCTTaGGAGGATCCTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFLDSA*EDPLLL
Trigger: CAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCCGGCATGTGCTTCTTaGCACCACTTTAGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEPACAS*HHFSPP
Trigger: CGGTGGACTAAAGTGGTGGCAAGAAGCACATGCCGG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGAGAGAGCCGCCTTCTaGCCTTGGAAGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEERAAF*PWKPSS
Trigger: TGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACATAAAAGGCATTTCTaGCATTGCCTCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVHKRHF*HCLPHL
Trigger: AAGATGAGGGAGGCAATGGCAGAAATGCCTTTTATG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGTACGCTGGGGTAGGTaGTCATGGAAAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCVRWGR*SWKGEG
Trigger: CCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTAC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAACAACCCATACTCGTaGTCTCCTGGAGTATACTCC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPNNPYS*SPGVYS
Trigger: GGAGTATACTCCAGGAGAGCACGAGTATGGGTTGTT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACACTGCACCCACTCATaGCTCTGTATCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRHCTHS*LCILWL
Trigger: TAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCCTTCGCAGTTTCCTaGCGGACCCTTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSAFAVS*RTLPPA
Trigger: TGCTGGAGGAAGGGTCCGGCAGGAAACTGCGAAGGC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGTTCTCCAAGTTCTTTaGAGGCTTTTTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGHALPSATREHLIPRSRVLQVL*RLFSSL
Trigger: AAGAGAACTAAAAAGCCTCCAAAGAACTTGGAGAAC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAAGACTCGAGCTTACTTaGACTTTCAGTGGCAACAAA +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVRLELT*TFSGNK
Trigger: TTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCT...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTTGGGGTAGGTGCTCATaGAAAGGAGAGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCWGRCS*KGEGSC
Trigger: GCAGGACCCCTCTCCTTTCCATGAGCACCTACCCCA...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGCGTTTCAAGAGGACTaGGAATTTCAACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVAFQED*EFQLVF
Trigger: AAACACCAGTTGAAATTCCCAGTCCTCTTGAAACGC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCACTTTCCAACATGAATaGGCGCTGGGAACAACCCAT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPTFQHE*ALGTTH
Trigger: ATGGGTTGTTCCCAGCGCCCATTCATGTTGGAAAGT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCCCCAATGTCCCCAGTaGCTCTTTCCTGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCPQCPQ*LFPGLA
Trigger: AGCCAGACCAGGAAAGAGCCACTGGGGACATTGGGG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCACAGAGTCCTTATTaGTCAGGCCTACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSQSPY*SGLLLH
Trigger: ATGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAAGTCGTCTGTGTCCTaGAGCTGGTCCTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEKSSVS*SWSSLS
Trigger: TGAGAGTGAGGACCAGCTTCAGGACACAGACGACTT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTGTGGCAGCAAGACTTaGGACTGTATTGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPCGSKT*DCIVKL
Trigger: AAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTAGTCCCAGAAGACTaGGAGCAAATAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLVPED*EQIGDG
Trigger: TCCATCACCTATTTGCTCTCAGTCTTCTGGGACTAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCATCTTGTCATAGCTaGGGTAATCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSSCHS*GNRDSC
Trigger: GCAGGAGTCACGATTACCTCAGCTATGACAAGATGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCAGTGGAGTGGTGAATaGAGGAGATGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSQWSGE*RRWWRW
Trigger: CCACCGCCACCATCTCCTTCATTCACCACTCCACTG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCATCTTGTTGGGGTGTTaGTGTTTTCACTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPILLGC*CFHWAL
Trigger: AAGAGCCCAGTGAAAACATCAACACCCCAACAAGAT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATACACACAATCACCCTaGCGAAGCAGCAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRYTQSP*RSSKSS
Trigger: AGATGACTTGCTGCTTCGTCAGGGTGATTGTGTGTA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGGCACCCTCTATCTCTaGTTCTCTTTTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEGTLYL*FSFAGQ
Trigger: CTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGCCAACAAGAGATGGTaGTGCACTAATGTAATCTGC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPANKRW*CTNVIC
Trigger: GCAGATTACATTAGTGCAGCACCATCTCTTGTTGGC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCACCGTTTTTCTCCATaGACTCTTGCTCATCGTGAT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPHRFSP*TLAHRD
Trigger: ATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAGCTATGGCCTGGACTaGAAGAAGGTGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSESYGLD*KKVVQT
Trigger: TGTCTGCACCACCTTCTTCCAGTCCAGGCCATAGCT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGGGAAGATTCAAAAGTaGAGCTGCAAGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRGKIQK*SCKGLL
Trigger: CAGCAAACCCTTGCAGCTCCACTTTTGAATCTTCCC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTAGGTTGAGCAGGATCTaGTTGAGCCGTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCRLSRI*LSRSLW
Trigger: CCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATGTGGCAGCAAGACTTaGGACTGTATTGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRCGSKT*DCIVKL
Trigger: AAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGTGAGTTCACTCAAATaGGAAGGAGAATTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPVSSLK*EGEFGN
Trigger: GTTGCCAAATTCTCCTTCTCATTTGAGTGAACTCAC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAAATGGTTCCTTTCTGTaGGGCCGATTTAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRNGSFL*GRFSAV
Trigger: TACTGCACTAAATCGGCCTCACAGAAAGGAACCATT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGTGAGGTTCACACTCTaGACCACAGCCTCGATCACA +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCVRFTL*TTASIT
Trigger: TGTGATCGAGGCTGTGGTTCAGAGTGTGAACCTCAC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAAGTCTCTTTTGGGAGTaGGCTTCTTGGGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSLFWE*ASWGND
Trigger: ATCATTTCCCCAAGAAGCTCACTCCCAAAAGAGACT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCCTTTCCTGCTTCTGTaGCCCTTTCTCGATTCCGCT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCPFLLL*PFLDSA
Trigger: AGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGAGAGAGCCGCCTTCTaGCCTTGGAAGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSERAAF*PWKPSS
Trigger: TGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCTGCCCTGTCTGATGTaGTATTATTATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLPCLM*YYYLSQ
Trigger: TTGGGACAGATAATAATAGCACATCAGACAGGGCAG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACTGTGCTTTTCCTTATaGTTATATCGATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: ALPSATREHLIPRSRGNVLCFSL*LYRSPT
Trigger: TGTTGGAGATCGATATAAGCATAAGGAAAAGCACAG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCTCTGGTTACAGCACTaGTCACCACAGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNLWLQH*SPQGQV
Trigger: CACTTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCACTGCACCCACTCATaGCTCTGTATCCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEHCTHS*LCILWL
Trigger: TAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACAGACTTTCTATGCGTaGTTGAAGACTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRQTFYA*LKTGYL
Trigger: AAGGTAGCCAGTCTTCAAGCACGCATAGAAAGTCTG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAACTGGGCTTCTTGACTaGTCTCCTCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRTGLLD*SPLVSF
Trigger: AAAAGAAACCAGAGGAGAGCAGTCAAGAAGCCCAGT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCATAGGCTTTTTCCCTaGATCTTTAGTTACCAACCC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPHRLFP*IFSYQP
Trigger: GGGTTGGTAACTAAAGATCCAGGGAAAAAGCCTATG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCTGGCAGTGTTTGTCTaGTGCAGTGACTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCLAVFV*CSDCTK
Trigger: CTTGGTGCAGTCACTGCACCAGACAAACACTGCCAG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAGGCTTTCAGCAACCTaGCAGTGTTTGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSERLSAT*QCLSGA
Trigger: TGCACCAGACAAACACTGCCAGGTTGCTGAAAGCCT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAACATCTCTCCCAATTaGGGATTTACGCCCATAGTA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPNISPN*GFTPIV
Trigger: TACTATGGGCGTAAATCCCCAATTGGGAGAGATGTT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCCTTAAGTTGTTCCTaGGTGGGGAGCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSALSCS*VGSSAS
Trigger: TGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGTTTGGAACCAACTGTaGAGAAGCTTCAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCVWNQL*RSFRGT
Trigger: AGTCCCCCTGAAGCTTCTTCACAGTTGGTTCCAAAC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGACTCTTGCCTCCAATaGTTCCTCGACACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEDSCLQ*FLDTSQ
Trigger: TTGAGAAGTGTCGAGGAATCATTGGAGGCAAGAGTC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCTCGGAGTAAACAGATaGAGTAGACACAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSLGVNR*SRHSRA
Trigger: AGCCCGGCTGTGTCTACTTCATCTGTTTACTCCGAG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACGGCCTCCAAGGGAATaGTCTCATAGAGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPRPPRE*SHRGAP
Trigger: GGGTGCCCCTCTATGAGATCATTCCCTTGGAGGCCG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTTCACTGAAAACTGTTaGTGTGCATCCGTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEFTENC*CASVEP
Trigger: TGGCTCGACGGATGCACAGCAACAGTTTTCAGTGAA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGATCAGGCCTACTGCTaGATTGAACATAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRDQAYC*IEHRLF
Trigger: AAAAAGCCTATGTTCAATGCAGCAGTAGGCCTGATC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAACGGAAGGAGTAATTaGATGAATACCAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPNGRSN*MNTRVR
Trigger: TCTGACTCTGGTATTCATGCAATTACTCCTTCCGTT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAGGCATTTCTGCCATTaGCTCCCTCATCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSRHFCH*LPHLRG
Trigger: CCCCCTAAGATGAGGGAGGCAATGGCAGAAATGCCT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAGGCATTTCTGCCATTaGCTCCCTCATCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNRHFCH*LPHLRG
Trigger: CCCCCTAAGATGAGGGAGGCAATGGCAGAAATGCCT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAGGGAGAGTAAGGCATaGCATAAGAAGGATAAAATC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPRESKA*HKKDKI
Trigger: GATTTTATCCTTCTTATGGCATGCCTTACTCTCCCT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTCTGCAGCTGCCTATTaGACTTGTAAAAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPSAAAY*TCKKVH
Trigger: ATGAACCTTTTTACAAGTGCAATAGGCAGCTGCAGA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTAGTGCTGCCACACCATaGACTTGTCACACTGGATCA +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCSAATP*TCHTGS
Trigger: TGATCCAGTGTGACAAGTGCATGGTGTGGCAGCACT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACGTTCCCTCTGGCTGTaGCTTCGCTCCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPRSLWL*LRSSGV
Trigger: CACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGATCCTCTTCTTCTGTaGCACCCTCTATCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEDPLLL*HPLSLL
Trigger: AAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATTCAATGGTTTGGACTaGAAACTCGAGCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRFNGLD*KLELRL
Trigger: AAGCCTAAGCTCGAGTTTCCAGTCCAAACCATTGAA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAGACTTACTCAACTTTaGCAATCGGCGTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPRLTQL*QSAFKE
Trigger: TTCCTTAAACGCCGATTGCCAAAGTTGAGTAAGTCT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCACTGTCACTGGGAATaGTCTCGTCACTATGAGACT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEHCHWE*SRHYET
Trigger: AGTCTCATAGTGACGAGACCATTCCCAGTGACAGTG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACACCATAAGCCATCTCTaGAGGTACGCTGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNTISHL*RYAGVG
Trigger: ACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCTATCCATGGAAACCTaGGGCTGTTCAGAACGGTGC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNLSMET*GCSERC
Trigger: GCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCTATCCATGGAAACCTaGGGCTGTTCAGAACGGTGC +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSLSMET*GCSERC
Trigger: GCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTATTGACACCACTGCTTaGAGGGGGCATTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSIDTTA*RGHFRG
Trigger: ACCTCGGAAATGCCCCCTCCAAGCAGTGGTGTCAAT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAATACTCGTGCTCTCCTaGAGTATACTCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRILVLS*SILQLF
Trigger: GAAAAGTTGGAGTATACTCCAGGAGAGCACGAGTAT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTTTGGGTCACAGCTGTaGTTGATGAATCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEFGSQL*LMNLAS
Trigger: TGAGGCCAGATTCATCAACCACAGCTGTGACCCAAA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTCTTCAGCTTGTGCTTaGACTTCCGCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSESSACA*TSASLS
Trigger: CGAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGATAGAACCGACGGGATaGAGAGTGATGAGTCTCATG +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEIEPTG*RVMSLM
Trigger: CATGAGACTCATCACTCTCCATCCCGTCGGTTCTAT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACCAGTGGCTCTTTCCTaGTCTGGCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPPVALS*SGSSGL
Trigger: CAGCCCTGAGGAGCCAGACCAGGAAAGAGCCACTGG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGTTTGGAACCAACTGTaGAGAAGCTTCAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNVWNQL*RSFRGT
Trigger: AGTCCCCCTGAAGCTTCTTCACAGTTGGTTCCAAAC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAACAAATGGAGCCACTaGCAGGACAGGGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNNKWSH*QDRGFH
Trigger: ATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTGGAAGGCTTGCATTaGCACCACTGCTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLEGLH*HHCLEG
Trigger: CCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCCCCTTCTTATGTTCTaGAGTGAGGTTCACACTCTG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCPLLMF*SEVHTL
Trigger: CAGAGTGTGAACCTCACTTCAGAACATAAGAAGGGG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCATCACAGATCTCTTTaGAGATCTGTGCTAGGCGCG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSHHRSL*RSVLGA
Trigger: CGCGCCTAGCACAGATCTTCAAAGAGATCTGTGATG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATTTTGTAATACCCAATaGGGATCTGCTTCTCTATGG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRFCNTQ*GSASLW
Trigger: CCATAGAGAAGCAGATCCTCATTGGGTATTACAAAA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTTCCGAGCTTGGCGTTaGATAGCTTCAACTACACTT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEFRAWR*IASTTL
Trigger: AAGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAATCGTTCCAGACACTaGACCCACTCATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNNRSRH*THSCLC
Trigger: ACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAATCGTTCCAGACACTaGACCCACTCATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSNRSRH*THSCLC
Trigger: ACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGTTTTCCTCTGCAGCTaGCAAGCGTCTTGTTCGAAC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNVFLCS*QASCSN
Trigger: GTTCGAACAAGACGCTTGGCAGCTGCAGAGGAAAAC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGGTGGCCATCAGGCGTaGGCCGACTGTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTGGHQA*ADCPSS
Trigger: TGATGAGGGACAGTCGGCGCACGCCTGATGGCCACC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAAGAGCCACTATCCATaGAAACCTGGGGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNKSHYP*KPGAVQ
Trigger: CTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTTATCGGAAGCTGACTaGGAACCTGCCAACGACTGT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNLSEAD*EPANDC
Trigger: ACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCACATTTTCCGAGCTTaGCGTTGCATAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEHIFRA*RCIAST
Trigger: AGTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTACTTTCCAACATGAATaGGCGCTGGGAACAACCCAT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCTFQHE*ALGTTH
Trigger: ATGGGTTGTTCCCAGCGCCCATTCATGTTGGAAAGT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCTCATAACCAGAAAGTaGTTTGACATCAACATAGAC +
Preference number: 4 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLITRK*FDINID
Trigger: GTCTATGTTGATGTCAAACCACTTTCTGGTTATGAG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTGCCTCTGTATCCTCTaGTTACAGCACTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSCLCIL*LQHCSP
Trigger: TGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGTGATGAGTCTCATGTaGGCGGAAATAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCVMSLM*AEIMVT
Trigger: GGTCACCATTATTTCCGCCCACATGAGACTCATCAC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTTCCTTTATTCCTTTaGGTCTCCCTTTACAGTATG +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRVPLFL*VSLYSM
Trigger: CATACTGTAAAGGGAGACCCAAAGGAATAAAGGAAC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAACAGATACAGTAGGTaGCGAGGAAGGAAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNNRYSR*RGRKVA
Trigger: AGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTAGCAAGAGATGGAGCTaGAGACTTACTCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCSKRWS*RLTQLW
Trigger: CCAAAGTTGAGTAAGTCTTCAGCTCCATCTCTTGCT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTCATCTTGTCATAGCTaGGGTAATCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNSSCHS*GNRDSC
Trigger: GCAGGAGTCACGATTACCTCAGCTATGACAAGATGA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGGAACACCTACTTGCTaGCTTTTCAGAAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCGTPTC*LFRKKW
Trigger: CCACTTCTTTCTGAAAAGTCAGCAAGTAGGTGTTCC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGACTCTTGCCTCCAATaGTTCCTCGACACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNDSCLQ*FLDTSQ
Trigger: TTGAGAAGTGTCGAGGAATCATTGGAGGCAAGAGTC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGCTTCTCTATGGTGCTaGGATCCAGGGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPASLWC*DPGGQR
Trigger: TCTCTGACCCCCTGGATCTCAGCACCATAGAGAAGC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTTCACTGAAAACTGTTaGTGTGCATCCGTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSFTENC*CASVEP
Trigger: TGGCTCGACGGATGCACAGCAACAGTTTTCAGTGAA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGGTAGCAATGAGCTGTaGCAACTTTTCTGTTACACT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEGSNEL*QLFCYT
Trigger: AGTGTAACAGAAAAGTTGGCACAGCTCATTGCTACC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGAGTCTGAATCATACTaGCCTGTCTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNESESY*PVWSAH
Trigger: ATGTGCACTCCAGACAGGGCAGTATGATTCAGACTC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGGGTAATCGTGACTCCTaGGCTTACATTTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEGNRDS*AYICVC
Trigger: ACAAACACAAATGTAAGCGCAGGAGTCACGATTACC...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAACAACCCATACTCGTaGTCTCCTGGAGTATACTCC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNNNPYS*SPGVYS
Trigger: GGAGTATACTCCAGGAGAGCACGAGTATGGGTTGTT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTTTCAGCAGTAAACTaGCTCTTTCCAATAGATTCA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLSAVN*LFPIDS
Trigger: TGAATCTATTGGAAAGAGCCAGTTTACTGCTGAAAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTATGAGACTCACTAACTaGGGAAGGAGTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCMRLTN*GRSGFF
Trigger: AAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCAT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGCGGTGGATAAAGAGTaGGGGGATACCTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNAVDKE*GDTFHN
Trigger: ATTATGGAAGGTATCCCCCCACTCTTTATCCACCGC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTATGTTCATCACTGCTaGCTGGCTCAGAATTGGGAG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSYVHHC*LAQNWE
Trigger: CTCCCAATTCTGAGCCAGCCAGCAGTGATGAACATA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTTTTCAGAAAGAAGTaGGATATTACTGCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLFRKK*DITARV
Trigger: GACTCTTGCAGTAATATCCCACTTCTTTCTGAAAAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGGCCTTCTTTTCTCGTaGGATGAGAGCCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPGLLFS*DESQHR
Trigger: CCTGTGCTGGCTCTCATCCCACGAGAAAAGAAGGCC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGTGATGAGTCTCATGTaGGCGGAAATAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSVMSLM*AEIMVT
Trigger: GGTCACCATTATTTCCGCCCACATGAGACTCATCAC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGCCTTAAGTTGTTCCTaGGTGGGGAGCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPALSCS*VGSSAS
Trigger: TGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAGCAAGAGATGGAGCTaGAGACTTACTCAACTTTGG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSSKRWS*RLTQLW
Trigger: CCAAAGTTGAGTAAGTCTTCAGCTCCATCTCTTGCT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCAGCAGCTGTAAGGGGTaGGGGAGAGTAAGGCATGCC +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTSSCKG*GRVRHA
Trigger: GGCATGCCTTACTCTCCCTCACCCCTTACAGCTGCT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTATCTTGTTGGGGTGTTaGTGTTTTCACTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSILLGC*CFHWAL
Trigger: AAGAGCCCAGTGAAAACATCAACACCCCAACAAGAT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAACAATCTCATCGATCTaGGCCGAAGCTTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPTISSI*AEASCR
Trigger: CCGGCATGAAGCTTCGGCTCAGATCGATGAGATTGT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTTTTTAGTTCTCTTTaGCTGAAGGCCAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLFSSL*LKANFQ
Trigger: TTGAAAATTGGCCTTCAGGCAAAGAGAACTAAAAAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACAAGTCCTAATTTCTTaGCAGACTCTTTATTCACTA +
Preference number: 4 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRQVLIS*QTLYSL
Trigger: TAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTGTCTGGAGTGCACATaGAAATATGGCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNCLECT*KYGTEL
Trigger: TAGCTCAGTGCCATATTTGCATGTGCACTCCAGACA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGCCGCCTTCTGCCCTTaGAAGCCTTCTTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPAAFCP*KPSSLQ
Trigger: TTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACATGCACTTGTCACACTaGATCATGAGGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNMHLSH*IMRPSS
Trigger: AGATGAAGGCCTCATGATCCAGTGTGACAAGTGCAT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCGTTTAAGGAAGTCATaGTCGACGAATGATGATGCT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNRLRKS*STNDDA
Trigger: AGCATCATCATTCGTCGATCATGACTTCCTTAAACG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAACAAATGGAGCCACTaGCAGGACAGGGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPNKWSH*QDRGFH
Trigger: ATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCTTGAGACTGTATTGTaGAGCTTGGACTGCACTTTT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNLETVL*SLDCTF
Trigger: AAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTCTTATGTTCTGAAGTaGGGTTCACACTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNSYVLK*GSHSEP
Trigger: TGGTTCAGAGTGTGAACCTCACTTCAGAACATAAGA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCATTTTGAAGGGCAGTaGTCATTCTTCTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSHFEGQ*SFFSSV
Trigger: GACAGATGAGAAGAATGAGCACTGCCCTTCAAAATG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAGATTTTGTCATAATTaGACATTTTCCGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSERFCHN*TFSELG
Trigger: GCCAAGCTCGGAAAATGTGCAATTATGACAAAATCT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATTCCAGGTTTTCCTCTaGAGCTGCCAAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPFQVFL*SCQASC
Trigger: ACAAGACGCTTGGCAGCTGCAGAGGAAAACCTGGAA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAGTGCTGCCACACCATaGACTTGTCACACTGGATCA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPSAATP*TCHTGS
Trigger: TGATCCAGTGTGACAAGTGCATGGTGTGGCAGCACT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGGGCACTTCCCTGGCTaGTTGCTCCTGACTAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLGHFPG*LLLTSQ
Trigger: CTGGCTAGTCAGGAGCAAGCAGCCAGGGAAGTGCCC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTATAGAGCCAACACCTaGTTTCCTGATCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNYRANT*FPDQVL
Trigger: AAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAGGCTTTCAGCAACCTaGCAGTGTTTGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPRLSAT*QCLSGA
Trigger: TGCACCAGACAAACACTGCCAGGTTGCTGAAAGCCT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCACAAACTGGGCGGCCTaGAAGGCTTGCATTGACACC +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTTNWAA*KACIDT
Trigger: GGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACATACTCGTGCTCTCCTaGAGTATACTCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNILVLS*SILQLF
Trigger: GAAAAGTTGGAGTATACTCCAGGAGAGCACGAGTAT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAGTTCCTCTCTCTGTTaGACATTGGCTTCATCTGTA +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNSSSLC*TLASSV
Trigger: TACAGATGAAGCCAATGTCCAACAGAGAGAGGAACT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGTAGGACTGACGGACTaGGTGGCCATCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSVGLTD*VAIRRA
Trigger: CGCACGCCTGATGGCCACCCAGTCCGTCAGTCCTAC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCTGGCTCCTCAGGGCTaGGCACTTCCCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFLAPQG*ALPWLL
Trigger: AAGCAGCCAGGGAAGTGCCCAGCCCTGAGGAGCCAG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCTGGCTCCTCAGGGCTaGGCACTTCCCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLAPQG*ALPWLL
Trigger: AAGCAGCCAGGGAAGTGCCCAGCCCTGAGGAGCCAG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGAGAAATTGTCTTGCTaGATGCATGTTCCTTCATTA +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCEKLSC*MHVPSL
Trigger: TAATGAAGGAACATGCATTCAGCAAGACAATTTCTC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCTACTAACAGGGCTCTaGCCTCCACTAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTLLTGL*PPLVPE
Trigger: TTCTGGGACTAGTGGAGGTCAGAGCCCTGTTAGTAG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAATGGTCTCGTCACTATaGGACTCACTAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPMVSSL*DSLTGE
Trigger: TTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCAT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCACAATCTCATCGATCTaGGCCGAAGCTTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTTISSI*AEASCR
Trigger: CCGGCATGAAGCTTCGGCTCAGATCGATGAGATTGT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGCTTTTTAGTTCTCTTTaGCTGAAGGCCAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LYSGNRGRESGSSSKCSELFSSL*LKANFQ
Trigger: TTGAAAATTGGCCTTCAGGCAAAGAGAACTAAAAAG...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCAATACACAGGAGGCTaGTTTTCATGTTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNQYTGG*FSCFEV
Trigger: AACCTCAAAACATGAAAAGCAGCCTCCTGTGTATTG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACAACGGAAGGAGTAATTaGATGAATACCAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNNGRSN*MNTRVR
Trigger: TCTGACTCTGGTATTCATGCAATTACTCCTTCCGTT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCTGACATTGATTTGTTaGCCCAATTTAGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCLTLIC*PNLEPN
Trigger: ATTTGGCTCTAAATTGGGGCAACAAATCAATGTCAG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGAGTCTGAATCATACTaGCCTGTCTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPESESY*PVWSAH
Trigger: ATGTGCACTCCAGACAGGGCAGTATGATTCAGACTC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGGAAGCCTTCTTCATTaGAAGAGTCTGAATCATACT +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSGSLLH*KSLNHT
Trigger: AGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAATGAAGTCTGGATCCTaGCTATTTCGAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPMKSGS*LFRSWG
Trigger: TCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCAT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGTGTCTGGACTTAGGTaGAGGGACATGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTVSGLR*RDMSSP
Trigger: AGGCGAAGACATGTCCCTGCACCTAAGTCCAGACAC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATGCAGTCGCAGTGCTaGCACACCATGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTMQSQC*HTMHLS
Trigger: TGACAAGTGCATGGTGTGGCAGCACTGCGACTGCAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCCTTCGCAGTTTCCTaGCGGACCCTTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHAFAVS*RTLPPA
Trigger: TGCTGGAGGAAGGGTCCGGCAGGAAACTGCGAAGGC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATATGTTCATCACTGCTaGCTGGCTCAGAATTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPYVHHC*LAQNWE
Trigger: CTCCCAATTCTGAGCCAGCCAGCAGTGATGAACATA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTGGAGTCAATCTTGTTaGGGTGTTGATGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNWSQSC*GVDVFT
Trigger: AGTGAAAACATCAACACCCCAACAAGATTGACTCCA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACGCACCAAGAACACATaGTGCTTTAGCACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPRTKNT*CFSTKF
Trigger: GAACTTCGTGCTAAAGCACCATGTGTTCTTGGTGCG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCAGTGGCTCTTTCCTaGTCTGGCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPVALS*SGSSGL
Trigger: CAGCCCTGAGGAGCCAGACCAGGAAAGAGCCACTGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATTGAGCCGTTCCCTCTaGCTGTGCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLLSRSL*LCLRSS
Trigger: TGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGAGAAATTGTCTTGCTaGATGCATGTTCCTTCATTA +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSEKLSC*MHVPSL
Trigger: TAATGAAGGAACATGCATTCAGCAAGACAATTTCTC...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAATGCAAATATGGCACTaGGCTAGGTTCAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPMQIWH*ARFNKA
Trigger: GGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCAT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGCCATCCTCCTTTCCTaGTTCTGTGCCCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLAILLS*FCAPFS
Trigger: CGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGTGAATGAAGATGGATaGTTTCTTCGGCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPVNEDG*FLRLGS
Trigger: ACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCAC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTATGATTACTTATGTTTaGACTACAGGAAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCMITYV*TTGSLK
Trigger: CTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCAT...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACCGGCATGTGCTTCTTaGCACCACTTTAGTCCACCG +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLPACAS*HHFSPP
Trigger: CGGTGGACTAAAGTGGTGGCAAGAAGCACATGCCGG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATTCCGAGCTTGGCGTTaGATAGCTTCAACTACACTT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPFRAWR*IASTTL
Trigger: AAGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGAGGTCGACCTGGTCTaGGTTTCACAAAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPEVDLV*VSQNCF
Trigger: GAAACAATTTTGTGAAACGCAGACCAGGTCGACCTC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCCGTGTTCACACCCATaGAGTCGCAGTGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHPCSHP*SRSAAT
Trigger: TGTGGCAGCACTGCGACTGCATGGGTGTGAACACGG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTGGGGTAGGTGCTCATaGAAAGGAGAGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFWGRCS*KGEGSC
Trigger: GCAGGACCCCTCTCCTTTCCATGAGCACCTACCCCA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACACCGTTTTTCTCCATaGACTCTTGCTCATCGTGAT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPHRFSP*TLAHRD
Trigger: ATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGCTGTAGCTATGGCCTaGACTGGAAGAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLAVAMA*TGRRWC
Trigger: GCACCACCTTCTTCCAGTCCAGGCCATAGCTACAGC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATACAGCCCAGCTCTCTaGTATTTCTTCTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPYSPAL*YFFFGG
Trigger: TCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTGTA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACCTCATAACCAGAAAGTaGTTTGACATCAACATAGAC +
Preference number: 4 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNLITRK*FDINID
Trigger: GTCTATGTTGATGTCAAACCACTTTCTGGTTATGAG...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATTGAGCCGTTCCCTCTaGCTGTGCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSLSRSL*LCLRSS
Trigger: TGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTCACAGAGTCCTTATTaGTCAGGCCTACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTSQSPY*SGLLLH
Trigger: ATGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGAAGGAGTAATTGCATaGATACCAGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPEGVIA*IPESEV
Trigger: GACTTCTGACTCTGGTATTCATGCAATTACTCCTTC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATGGTCTCGTCACTATaGGACTCACTAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTMVSSL*DSLTGE
Trigger: TTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCACCTCCTCCTGCTTCTaGTGGATCTTTTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTTSSCF*WIFSQF
Trigger: AAACTGGGAAAAGATCCATCAGAAGCAGGAGGAGGT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCTTCTCTATGGTGCTaGGATCCAGGGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHASLWC*DPGGQR
Trigger: TCTCTGACCCCCTGGATCTCAGCACCATAGAGAAGC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATGTCACACTGGATCATaGGGCCTTCATCTTTATAGA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPCHTGS*GLHLYR
Trigger: TCTATAAAGATGAAGGCCTCATGATCCAGTGTGACA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCTGGCTGCTTGCTCCTaGCTAGCCAGTACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLAACS*LASTSS
Trigger: TGAAGAGGTACTGGCTAGTCAGGAGCAAGCAGCCAG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGCCATCCTCCTTTCCTaGTTCTGTGCCCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSAILLS*FCAPFS
Trigger: CGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTATGATTACTTATGTTTaGACTACAGGAAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSMITYV*TTGSLK
Trigger: CTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCAT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTGCCCTGTCTGATGTaGTATTATTATCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLPCLM*YYYLSQ
Trigger: TTGGGACAGATAATAATAGCACATCAGACAGGGCAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATGAAGTCTGGATCCTaGCTATTTCGAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTMKSGS*LFRSWG
Trigger: TCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCTAAGGCTCGCTCCTTaGTGTAGCTATGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFLRLAP*CSYGLD
Trigger: GTCCAGGCCATAGCTACAGCAAGGAGCGAGCCTTAG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCTCTGGTTACAGCACTaGTCACCACAGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFLWLQH*SPQGQV
Trigger: CACTTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTGGATGTCACGGGTGTaGTTCACCTCCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHWMSRV*FTSSCF
Trigger: GAAGCAGGAGGAGGTGAAGCACACCCGTGACATCCA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGATCCTCTTCTTCTGTaGCACCCTCTATCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTDPLLL*HPLSLL
Trigger: AAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATTCAATGGTTTGGACTaGAAACTCGAGCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPFNGLD*KLELRL
Trigger: AAGCCTAAGCTCGAGTTTCCAGTCCAAACCATTGAA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGGCCTTCTTTTCTCGTaGGATGAGAGCCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSGLLFS*DESQHR
Trigger: CCTGTGCTGGCTCTCATCCCACGAGAAAAGAAGGCC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAAACATCTCTCCCAATTaGGGATTTACGCCCATAGTA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPNISPN*GFTPIV
Trigger: TACTATGGGCGTAAATCCCCAATTGGGAGAGATGTT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATGCTGTCGGCCTCACTaGCCGTTTCTCCCACAATCT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSCCRPH*PFLPQS
Trigger: AGATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTGCTGTCGGCCTCACTaGCCGTTTCTCCCACAATCT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFCCRPH*PFLPQS
Trigger: AGATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATAGAACCGACGGGATaGAGAGTGATGAGTCTCATG +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTIEPTG*RVMSLM
Trigger: CATGAGACTCATCACTCTCCATCCCGTCGGTTCTAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGTAATCTGCCATTTGTaGATGTACTGGAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPVICHL*MYWRKL
Trigger: AAGCTTTCTCCAGTACATTCACAAATGGCAGATTAC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAAGTCGTCTGTGTCCTaGAGCTGGTCCTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSKSSVS*SWSSLS
Trigger: TGAGAGTGAGGACCAGCTTCAGGACACAGACGACTT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTTCATTGCAAGAGTCTaGATCATACTGCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTFIARV*IILPCL
Trigger: CAGACAGGGCAGTATGATTCAGACTCTTGCAATGAA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGTGAGGTTCACACTCTaGACCACAGCCTCGATCACA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHVRFTL*TTASIT
Trigger: TGTGATCGAGGCTGTGGTTCAGAGTGTGAACCTCAC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACTCGGAGTAAACAGATaGAGTAGACACAGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSLGVNR*SRHSRA
Trigger: AGCCCGGCTGTGTCTACTTCATCTGTTTACTCCGAG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACTGCCCTGTCTGGAGTaGACATGCAAATATGGCACT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLLPCLE*TCKYGT
Trigger: AGTGCCATATTTGCATGTGCACTCCAGACAGGGCAG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGGAAGCCTTCTTCATTaGAAGAGTCTGAATCATACT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPGSLLH*KSLNHT
Trigger: AGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCAGACTTTCTATGCGTaGTTGAAGACTGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTQTFYA*LKTGYL
Trigger: AAGGTAGCCAGTCTTCAAGCACGCATAGAAAGTCTG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATATGCAGTCGCAGTGCTaGCACACCATGCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHMQSQC*HTMHLS
Trigger: TGACAAGTGCATGGTGTGGCAGCACTGCGACTGCAT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTACCATAAGCCATCTCTaGAGGTACGCTGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFTISHL*RYAGVG
Trigger: ACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAGCTATGGCCTGGACTaGAAGAAGGTGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFSYGLD*KKVVQT
Trigger: TGTCTGCACCACCTTCTTCCAGTCCAGGCCATAGCT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATGCACTTGTCACACTaGATCATGAGGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTMHLSH*IMRPSS
Trigger: AGATGAAGGCCTCATGATCCAGTGTGACAAGTGCAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCATTACTTTCCCCCTGTaGATGAAGATGGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTITFPL*MKMDAF
Trigger: GAAAGCATCCATCTTCATTCACAGGGGGAAAGTAAT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGAAGGAGTAATTGCATaGATACCAGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTEGVIA*IPESEV
Trigger: GACTTCTGACTCTGGTATTCATGCAATTACTCCTTC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTGTCACACTGGATCATaGGGCCTTCATCTTTATAGA +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTCHTGS*GLHLYR
Trigger: TCTATAAAGATGAAGGCCTCATGATCCAGTGTGACA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTCTCTGCTTCTCTTTTaGTGGCCAGAGTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHSLLLF*WPECQD
Trigger: ATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTGACATTGATTTGTTaGCCCAATTTAGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLTLIC*PNLEPN
Trigger: ATTTGGCTCTAAATTGGGGCAACAAATCAATGTCAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTCCAGGTTTTCCTCTaGAGCTGCCAAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHFQVFL*SCQASC
Trigger: ACAAGACGCTTGGCAGCTGCAGAGGAAAACCTGGAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAGGCATAGGGTTTGGTaGAGACCGGATATCGATTCC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFRHRVW*RPDIDS
Trigger: GGAATCGATATCCGGTCTGCACCAAACCCTATGCCT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAGGCATAGGGTTTGGTaGAGACCGGATATCGATTCC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHRHRVW*RPDIDS
Trigger: GGAATCGATATCCGGTCTGCACCAAACCCTATGCCT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTTTCAGCAGTAAACTaGCTCTTTCCAATAGATTCA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLSAVN*LFPIDS
Trigger: TGAATCTATTGGAAAGAGCCAGTTTACTGCTGAAAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAAGAGCCACTATCCATaGAAACCTGGGGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHKSHYP*KPGAVQ
Trigger: CTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAACATGAATGGGCGCTaGGAACAACCCATACTCGTG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSNMNGR*EQPILV
Trigger: CACGAGTATGGGTTGTTCCCAGCGCCCATTCATGTT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTGCCTCTGTATCCTCTaGTTACAGCACTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHCLCIL*LQHCSP
Trigger: TGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGACTGGCTACCTTTATaGCTAGGGAGTCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFDWLPL*LGSPFI
Trigger: GATGAACGGACTCCCTAGCCATAAAGGTAGCCAGTC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGACTGGCTACCTTTATaGCTAGGGAGTCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHDWLPL*LGSPFI
Trigger: GATGAACGGACTCCCTAGCCATAAAGGTAGCCAGTC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATCTTCAGCTTGTGCTTaGACTTCCGCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLSSACA*TSASLS
Trigger: CGAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGAC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHCRAEN*VMKTSD
Trigger: GTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTTTAAGTGCTTTCCTTaGGTGCTTGATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTFKCFP*VLDGCL
Trigger: AAGACAACCATCAAGCACTCAAGGAAAGCACTTAAA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGAGGCACCTCCTATTTaGAAGTCAGGAGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHEAPPI*KSGEVQ
Trigger: TTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACTGAGAGCAAATAGGTaGTGGAAGGATCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSLRANR*WKDLRA
Trigger: AGCTCTGAGATCCTTCCATCACCTATTTGCTCTCAG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCTGAGAGCAAATAGGTaGTGGAAGGATCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLRANR*WKDLRA
Trigger: AGCTCTGAGATCCTTCCATCACCTATTTGCTCTCAG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAATGCAAATATGGCACTaGGCTAGGTTCAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLMQIWH*ARFNKA
Trigger: GGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCAT...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTCTCGGGGAATAAAATaGTGGCTTCGATGGGTGATC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFSRGIK*WLRWVI
Trigger: GATCACCCATCGAAGCCATCATTTTATTCCCCGAGA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCCCTTCTTATGTTCTaGAGTGAGGTTCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPLLMF*SEVHTL
Trigger: CAGAGTGTGAACCTCACTTCAGAACATAAGAAGGGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAGATACTTTCCAACATaGATGGGCGCTGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSRYFPT*MGAGNN
Trigger: GTTGTTCCCAGCGCCCATTCATGTTGGAAAGTATCT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGATACAGACAAACTTTaGTTGAAGGAAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPDTDKL*LKEGIS
Trigger: TGAAATTCCTTCCTTCAAGCAAAGTTTGTCTGTATC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGAAGTGGGATATTACTaGAAGAGTCATTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLEVGYY*KSHSGL
Trigger: CAGTCCCGAATGACTCTTGCAGTAATATCCCACTTC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTCTTCGGTTTTGCCTTaGAAGACTTGGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFSSVLP*KTWKED
Trigger: GTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCAATGCCACTGTCACTaGGAATGGTCTCGTCACTAT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFQCHCH*EWSRHY
Trigger: ATAGTGACGAGACCATTCCCAGTGACAGTGGCATTG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACAATGCCACTGTCACTaGGAATGGTCTCGTCACTAT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSQCHCH*EWSRHY
Trigger: ATAGTGACGAGACCATTCCCAGTGACAGTGGCATTG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTGCCTATTTCGAAGCTaGGGATATTTCTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTCLFRS*GYFFFR
Trigger: ACGGAAAAAGAAATATCCCCAGCTTCGAAATAGGCA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATTTCCGAGGTCGACCTaGTCTGCGTTTCACAAAATT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLFPRST*SAFHKI
Trigger: AATTTTGTGAAACGCAGACCAGGTCGACCTCGGAAA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCTATTCAATGATGAACTaGCCAGCTTTTAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTYSMMN*PAFRGS
Trigger: AGAACCCCTAAAAGCTGGCCAGTTCATCATTGAATA...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCGCACCAAGAACACATaGTGCTTTAGCACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFRTKNT*CFSTKF
Trigger: GAACTTCGTGCTAAAGCACCATGTGTTCTTGGTGCG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCAAAGGCATAGGGTTTaGTGCAGACCGGATATCGAT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFQRHRV*CRPDID
Trigger: ATCGATATCCGGTCTGCACCAAACCCTATGCCTTTG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCCGAAAGCTATTTTCTaGTATAAACAAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTPKAIF*YKQSAP
Trigger: AGGCGCACTTTGTTTATACCAGAAAATAGCTTTCGG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACGTTTAAGGAAGTCATaGTCGACGAATGATGATGCT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLRLRKS*STNDDA
Trigger: AGCATCATCATTCGTCGATCATGACTTCCTTAAACG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACTTGAGACTGTATTGTaGAGCTTGGACTGCACTTTT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLLETVL*SLDCTF
Trigger: AAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGTGAGTTCACTCAAATaGGAAGGAGAATTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLVSSLK*EGEFGN
Trigger: GTTGCCAAATTCTCCTTCTCATTTGAGTGAACTCAC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAATGGTTCCTTTCTGTaGGGCCGATTTAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFNGSFL*GRFSAV
Trigger: TACTGCACTAAATCGGCCTCACAGAAAGGAACCATT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGGAACACCTACTTGCTaGCTTTTCAGAAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSGTPTC*LFRKKW
Trigger: CCACTTCTTTCTGAAAAGTCAGCAAGTAGGTGTTCC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACATTTTGAAGGGCAGTaGTCATTCTTCTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLHFEGQ*SFFSSV
Trigger: GACAGATGAGAAGAATGAGCACTGCCCTTCAAAATG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGTGAATGAAGATGGATaGTTTCTTCGGCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSVNEDG*FLRLGS
Trigger: ACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCAC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATGTCTGGAGTGCACATaGAAATATGGCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSCLECT*KYGTEL
Trigger: TAGCTCAGTGCCATATTTGCATGTGCACTCCAGACA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTACTGGAAGAAGGTGGTaGAGACACAGTTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFTGRRW*RHSCNG
Trigger: TCCATTACAACTGTGTCTGCACCACCTTCTTCCAGT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGAAGTGGGATATTACTaGAAGAGTCATTCGGGACTG +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFEVGYY*KSHSGL
Trigger: CAGTCCCGAATGACTCTTGCAGTAATATCCCACTTC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAGAGCCAGCACAGGTTaGAAGGTATTTTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFRASTG*KVFSGS
Trigger: TGAACCTGAAAATACCTTGCAACCTGTGCTGGCTCT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAGAGCCAGCACAGGTTaGAAGGTATTTTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHRASTG*KVFSGS
Trigger: TGAACCTGAAAATACCTTGCAACCTGTGCTGGCTCT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAACTGGGCTTCTTGACTaGTCTCCTCTGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSTGLLD*SPLVSF
Trigger: AAAAGAAACCAGAGGAGAGCAGTCAAGAAGCCCAGT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTACTTGGACTTTCAGTaGCAACAAATGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFYLDFQ*QQMEPL
Trigger: CAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGATTCGAAAAATAGTTaGCAGGAGGTCTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSDSKNS*QEVSGN
Trigger: ATTCCCCGAGACCTCCTGCCAACTATTTTTCGAATC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGATTCGAAAAATAGTTaGCAGGAGGTCTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHDSKNS*QEVSGN
Trigger: ATTCCCCGAGACCTCCTGCCAACTATTTTTCGAATC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATGGACTGGAAGAAGGTaGTGCAGACACAGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSWTGRR*CRHSCN
Trigger: ATTACAACTGTGTCTGCACCACCTTCTTCCAGTCCA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCCAGGTTTTTCTTGGTaGCCAAGATTTTGTCATAAT +
Preference number: 4 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTPGFSW*PRFCHN
Trigger: ATTATGACAAAATCTTGGCCACCAAGAAAAACCTGG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAGGTCCAGGTTTTTCTTaGTGGCCAAGATTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLGPGFS*WPRFCH
Trigger: ATGACAAAATCTTGGCCACCAAGAAAAACCTGGACC...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTACAGCCCAGCTCTCTaGTATTTCTTCTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHYSPAL*YFFFGG
Trigger: TCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTGTA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCCTGGTGTCGTCATCTaGCTTCTTACAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFPGVVI*LLTITG
Trigger: ACCTGTAATTGTAAGAAGCCAGATGACGACACCAGG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATTTAAGTGCTTTCCTTaGGTGCTTGATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLFKCFP*VLDGCL
Trigger: AAGACAACCATCAAGCACTCAAGGAAAGCACTTAAA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR TCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAACCAATCCCATTGCTaGGCTTGCTACAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSNQSHC*ACYNLL
Trigger: AAGAAGATTGTAGCAAGCTCAGCAATGGGATTGGTT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGGTAGCAATGAGCTGTaGCAACTTTTCTGTTACACT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSGSNEL*QLFCYT
Trigger: AGTGTAACAGAAAAGTTGGCACAGCTCATTGCTACC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGATCAGGCCTACTGCTaGATTGAACATAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFDQAYC*IEHRLF
Trigger: AAAAAGCCTATGTTCAATGCAGCAGTAGGCCTGATC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGGTAATCGTGACTCCTaGGCTTACATTTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHGNRDS*AYICVC
Trigger: ACAAACACAAATGTAAGCGCAGGAGTCACGATTACC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCATAAAAGGCATTTCTaGCATTGCCTCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHHKRHF*HCLPHL
Trigger: AAGATGAGGGAGGCAATGGCAGAAATGCCTTTTATG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACATAGGCTTTTTCCCTaGATCTTTAGTTACCAACCC +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSHRLFP*IFSYQP
Trigger: GGGTTGGTAACTAAAGATCCAGGGAAAAAGCCTATG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAAGACTTACTCAACTTTaGCAATCGGCGTTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLRLTQL*QSAFKE
Trigger: TTCCTTAAACGCCGATTGCCAAAGTTGAGTAAGTCT...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTAGACTCGAGCTTACTTaGACTTTCAGTGGCAACAAA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFRLELT*TFSGNK
Trigger: TTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTCACTGCTACTTCTATaGTTCTCACTTTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHSLLLL*FSLSDS
Trigger: CGAGTCTGAAAGTGAGAACCATAGAAGTAGCAGTGA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATCACTGCTACTTCTATaGTTCTCACTTTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSSLLLL*FSLSDS
Trigger: CGAGTCTGAAAGTGAGAACCATAGAAGTAGCAGTGA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGTATTGCCCTTTCACTaGAAGGTAATGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFVLPFH*KVMVPF
Trigger: GAAAGGAACCATTACCTTCCAGTGAAAGGGCAATAC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGTATTGCCCTTTCACTaGAAGGTAATGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSVLPFH*KVMVPF
Trigger: GAAAGGAACCATTACCTTCCAGTGAAAGGGCAATAC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCGTTTCAAGAGGACTaGGAATTTCAACTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHAFQED*EFQLVF
Trigger: AAACACCAGTTGAAATTCCCAGTCCTCTTGAAACGC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATGGAGTCAATCTTGTTaGGGTGTTGATGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLWSQSC*GVDVFT
Trigger: AGTGAAAACATCAACACCCCAACAAGATTGACTCCA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCTGGAACAATACCAATaGCTAGCTTCTTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLEQYQ*LASFLI
Trigger: AATCAGGAAAGAAGCTAGGCATTGGTATTGTTCCAG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACAATACACAGGAGGCTaGTTTTCATGTTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSQYTGG*FSCFEV
Trigger: AACCTCAAAACATGAAAAGCAGCCTCCTGTGTATTG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAGGGAGAGTAAGGCATaGCATAAGAAGGATAAAATC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHRESKA*HKKDKI
Trigger: GATTTTATCCTTCTTATGGCATGCCTTACTCTCCCT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTCTGCAGCTGCCTATTaGACTTGTAAAAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHSAAAY*TCKKVH
Trigger: ATGAACCTTTTTACAAGTGCAATAGGCAGCTGCAGA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATGCCTATTTCGAAGCTaGGGATATTTCTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSCLFRS*GYFFFR
Trigger: ACGGAAAAAGAAATATCCCCAGCTTCGAAATAGGCA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGTTCCTTTATTCCTTTaGGTCTCCCTTTACAGTATG +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHVPLFL*VSLYSM
Trigger: CATACTGTAAAGGGAGACCCAAAGGAATAAAGGAAC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCCGAAAGCTATTTTCTaGTATAAACAAAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFPKAIF*YKQSAP
Trigger: AGGCGCACTTTGTTTATACCAGAAAATAGCTTTCGG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACAAGTCCTAATTTCTTaGCAGACTCTTTATTCACTA +
Preference number: 4 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLQVLIS*QTLYSL
Trigger: TAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCTGTGCTTTTCCTTATaGTTATATCGATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFLCFSL*LYRSPT
Trigger: TGTTGGAGATCGATATAAGCATAAGGAAAAGCACAG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAGATTTTGTCATAATTaGACATTTTCCGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHRFCHN*TFSELG
Trigger: GCCAAGCTCGGAAAATGTGCAATTATGACAAAATCT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGTTCTCCAAGTTCTTTaGAGGCTTTTTAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFVLQVL*RLFSSL
Trigger: AAGAGAACTAAAAAGCCTCCAAAGAACTTGGAGAAC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTCTTTTCAGAAAGAAGTaGGATATTACTGCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFLFRKK*DITARV
Trigger: GACTCTTGCAGTAATATCCCACTTCTTTCTGAAAAG...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CCA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCAGGTTTTTCTTGGTaGCCAAGATTTTGTCATAAT +
Preference number: 4 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPGFSW*PRFCHN
Trigger: ATTATGACAAAATCTTGGCCACCAAGAAAAACCTGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGATACAGACAAACTTTaGTTGAAGGAAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHDTDKL*LKEGIS
Trigger: TGAAATTCCTTCCTTCAAGCAAAGTTTGTCTGTATC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATTTGTAAAGGTGTTTaGAATCCCAAGGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFICKGV*NPKAKE
Trigger: TTCTTTAGCCTTGGGATTGCAAACACCTTTACAAAT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR GCA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATATTTGTAAAGGTGTTTaGAATCCCAAGGCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHICKGV*NPKAKE
Trigger: TTCTTTAGCCTTGGGATTGCAAACACCTTTACAAAT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTGAGAAGTCTCTTTaGGGAGTGAGCTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRGEKSL*GVSFLG
Trigger: CCCCAAGAAGCTCACTCCCAAAAGAGACTTCTCACC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCTTTTAGGGGTGGCTTaGAGCGTTCAGACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRLLGVA*SVQTSR
Trigger: CCTGGAAGTCTGAACGCTCAAAGCCACCCCTAAAAG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTCTAAGTCTAGTCCTTTaGGAGACCGGCATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRLSLVL*ETGMCF
Trigger: GAAGCACATGCCGGTCTCCAAAAGGACTAGACTTAG...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGAGTCCGTTCATCCGTaGACTCTTGCCTCCAATGAT +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRESVHP*TLASND
Trigger: ATCATTGGAGGCAAGAGTCAACGGATGAACGGACTC...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp GGCTCTTTCCTGGTCTGGCTCCTCAGGGCTGGGCACTTCCCTGGCTaGTTGCTCCTGACTAGCCAGTACCTCTTCAATCAAGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GSFLVWLLRAGHFPG*LLLTSQYLFNQGQS
Trigger: GCTTTGCCCTTGATTGAAGAGGTACTGGCTAGTCAGGAGCAAGCAGCCAGGGAAGTGCCCAGCCCTGAGGAGCCAGACCAGGAAAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTTCTTCGTAACATCCTaGGCCACTAGGCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRFFVTS*ATRPTV
Trigger: TACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTAGAGGCACCTCCTATTaGAAAGTCAGGAGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRRGTSY*KVRRSA
Trigger: TGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCT...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTTCTTCAGCTTGTGCTaGGACTTCCGCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRFFSLC*DFRFSF
Trigger: GAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGAA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTATGCCACACCATGCACTaGTCACACTGGATCATGAGG +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVCHTMH*SHWIMR
Trigger: CCTCATGATCCAGTGTGACAAGTGCATGGTGTGGCA...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp ATTCAATTCCGGGCTGACAAACTGGGCGGCCTGGAAGGCTTGCATTaGCACCACTGCTTGGAGGGGGCATTTCCGAGGTCGACCTGGTCT +
Preference number: 5 (lower is better)
Translates to: IQFRADKLGGLEGLH*HHCLEGAFPRSTWS
Trigger: AGACCAGGTCGACCTCGGAAATGCCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp CCTTCATTCAATTCCGGGCTGACAAACTGGGCGGCCTGGAAGGCTTaGATTGACACCACTGCTTGGAGGGGGCATTTCCGAGGTCGACCT +
Preference number: 5 (lower is better)
Translates to: PSFNSGLTNWAAWKA*IDTTAWRGHFRGRP
Trigger: AGGTCGACCTCGGAAATGCCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp TGCAGGGACATGTCTTCGCCTTCATTCAATTCCGGGCTGACAAACTaGGCGGCCTGGAAGGCTTGCATTGACACCACTGCTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CRDMSSPSFNSGLTN*AAWKACIDTTAWRG
Trigger: CCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGGCGAAGACATGTCCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp CGCTCTCCTTCTCGGAGACTGAGGTCTCGCTGCTGTCGGCCTCACTaGCCGTTTCTCCCACAATCTCATCGATCTGAGCCGAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RSPSRRLRSRCCRPH*PFLPQSHRSEPKLH
Trigger: ATGAAGCTTCGGCTCAGATCGATGAGATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCAGCGAGACCTCAGTCTCCGAGAAGGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACTGCGTTTCACAAAATaGTTTCCTGTCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVLRFTK*FPVLAC
Trigger: GCAGGCCAGGACAGGAAACAATTTTGTGAAACGCAG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GATAACATCATCATCCTTCTCGTGCCCGCTCTCCTTCTCGGAGACTaGGGTCTCGCTGCTGTCGGCCTCACTGGCCGTTTCTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: DNIIILLVPALLLGD*GLAAVGLTGRFSHN
Trigger: ATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCAGCGAGACCTCAGTCTCCGAGAAGGAGAGCGGGCACGAGAAGGATGATGATGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp GAGATAAGAGTCTGTAGGACTGACGGACTGGGTGGCCATCAGGCGTaGGCCGACTGTCCCTCATCAGGTACACACAATCACCCTGACGAA +
Preference number: 5 (lower is better)
Translates to: EIRVCRTDGLGGHQA*ADCPSSGTHNHPDE
Trigger: TTCGTCAGGGTGATTGTGTGTACCTGATGAGGGACAGTCGGCGCACGCCTGATGGCCACCCAGTCCGTCAGTCCTACAGACTCTTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAAGGCCTACTGCTGCATaGAACATAGGCTTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVRPTAA*NIGFFP
Trigger: AGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCT...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTACCAAGGCTAAAGAACTaGATTCTGAAGGCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVPRLKN*ILKALE
Trigger: CTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGG...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ACGGTGTCTGTGTTTGTGCTCCACCATCCAACCATAAGCCATCTCTaGAGGTACGCTGGGGTAGGTGCTCATGGAAAGGAGAGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: TVSVFVLHHPTISHL*RYAGVGAHGKERGP
Trigger: AGGACCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGTTGGATGGTGGAGCACAAACACAGACACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATGTCTTCGCCTTCATTCAATTCCGGGCTGACAAACTGGGCGGCCTaGAAGGCTTGCATTGACACCACTGCTTGGAGGGGGCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: MSSPSFNSGLTNWAA*KACIDTTAWRGHFR
Trigger: TCGGAAATGCCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGGCGAAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATTTTCTCAAGGAGGTTGAGCAGGATCTGGTTGAGCCGTTCCCTCTaGCTGTGCCTTCGCTCCTCAGGTGTGCTGGCTAACTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IFSRRLSRIWLSRSL*LCLRSSGVLANWAS
Trigger: AGAAGCCCAGTTAGCCAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCTCCTTGAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGCTTTCCTTGAGTGCTaGATGGTTGTCTTTATGGCA +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVAFLEC*MVVFMA
Trigger: TGCCATAAAGACAACCATCAAGCACTCAAGGAAAGC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAATCTTTACTGCCCAGTaGTCCTGCCATAGGACAATT +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVIFTAQ*SCHRTI
Trigger: AATTGTCCTATGGCAGGACAACTGGGCAGTAAAGAT...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGAGAGCCAGCACAGGTaGCAAGGTATTTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPESQHR*QGIFRF
Trigger: GAACCTGAAAATACCTTGCAACCTGTGCTGGCTCTC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GACTTAGGTGCAGGGACATGTCTTCGCCTTCATTCAATTCCGGGCTaGCAAACTGGGCGGCCTGGAAGGCTTGCATTGACACCACTGCTT +
Preference number: 5 (lower is better)
Translates to: DLGAGTCLRLHSIPG*QTGRPGRLALTPLL
Trigger: AAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGGCGAAGACATGTCCCTGCACCTAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp AAAGGTCCAACACACAGCAGGTCCCAACTACGGCCTCCAAGGGAATaGTCTCATAGAGGGGCACCCGGAACAGCTCGTTGTGATAGAACC +
Preference number: 5 (lower is better)
Translates to: KGPTHSRSQLRPPRE*SHRGAPGTARCDRT
Trigger: GGTTCTATCACAACGAGCTGTTCCGGGTGCCCCTCTATGAGATCATTCCCTTGGAGGCCGTAGTTGGGACCTGCTGTGTGTTGGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp AGCCATCCTCCTTTCCTGCTTCTGTGCCCCTTTCTCGATTCCGCTTaGGAGGATCCTCTTCTTCTGTGGCACCCTCTATCTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SHPPFLLLCPFLDSA*EDPLLLWHPLSLLL
Trigger: GAGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp CTGCAGGCACTAGAAGGCTGTCTGATTTACCTAAGGCTCGCTCCTTaGTGTAGCTATGGCCTGGACTGGAAGAAGGTGGTGCAGACACAG +
Preference number: 5 (lower is better)
Translates to: LQALEGCLIYLRLAP*CSYGLDWKKVVQTQ
Trigger: CTGTGTCTGCACCACCTTCTTCCAGTCCAGGCCATAGCTACAGCAAGGAGCGAGCCTTAGGTAAATCAGACAGCCTTCTAGTGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp CGAAATCGTTCCAGACACTGCACCCACTCATGCCTCTGTATCCTCTaGTTACAGCACTGCTCACCACAGGGGCAAGTGTTAGGGGAACAC +
Preference number: 5 (lower is better)
Translates to: RNRSRHCTHSCLCIL*LQHCSPQGQVLGEH
Trigger: GTGTTCCCCTAACACTTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTTAAAAGTAATGGGTTaGGAACCAACTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRLKVMG*EPTVKK
Trigger: CTTCTTCACAGTTGGTTCCAAACCCATTACTTTTAA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCAGACTCGAGCTTACTaGGACTTTCAGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPQTRAY*DFQWQQ
Trigger: TTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTTGGCCATGCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTTGTTTGTGTTTTTCTTaGAGACTGTTTAGGACGGTA +
Preference number: 5 (lower is better)
Translates to: LGHALPSATREHLIPRSRCLCFS*RLFRTV
Trigger: TACCGTCCTAAACAGTCTCAAAGAAAAACACAAACA...ACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGCATGGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTTCCGAGCTTGGCGTaGCATAGCTTCAACTACACT +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFPSLA*HSFNYT
Trigger: AGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCTGGTATTTCTTCTTaGGAGGACGTGGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSGISS*EDVGPS
Trigger: AGAAGGCCCCACGTCCTCCAAAGAAGAAATACCAGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTCTTCAGCTTGTGCTaGGACTTCCGCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFFSLC*DFRFSF
Trigger: GAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACCATCACAGATCTCTTaGAAGATCTGTGCTAGGCGC +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRPSQIS*KICARR
Trigger: GCGCCTAGCACAGATCTTCAAAGAGATCTGTGATGG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp AGACACTGCACCCACTCATGCCTCTGTATCCTCTGGTTACAGCACTaGTCACCACAGGGGCAAGTGTTAGGGGAACACTCAGCAAAGATC +
Preference number: 5 (lower is better)
Translates to: RHCTHSCLCILWLQH*SPQGQVLGEHSAKI
Trigger: GATCTTTGCTGAGTGTTCCCCTAACACTTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp CCTTTTTCCTCAGCTCGAAATCGTTCCAGACACTGCACCCACTCATaGCTCTGTATCCTCTGGTTACAGCACTGCTCACCACAGGGGCAA +
Preference number: 5 (lower is better)
Translates to: PFSSARNRSRHCTHS*LCILWLQHCSPQGQ
Trigger: TTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATTTCGAGCTGAGGAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATGGCATTTTTCCCAGGTATTTTCTCAAGGAGGTTGAGCAGGATCTaGTTGAGCCGTTCCCTCTGGCTGTGCCTTCGCTCCTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: MAFFPGIFSRRLSRI*LSRSLWLCLRSSGV
Trigger: CACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCTCCTTGAGAAAATACCTGGGAAAAATGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCAAACATCTCTCCCAATaGGGGATTTACGCCCATAGT +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPKHLSQ*GIYAHS
Trigger: ACTATGGGCGTAAATCCCCAATTGGGAGAGATGTTT...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp ATTCCGCTTGCGAGGATCCTCTTCTTCTGTGGCACCCTCTATCTCTaGTTCTCTTTTGCTGGCCAGAGTGCCAGGATTGATGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: IPLARILFFCGTLYL*FSFAGQSARIDGRR
Trigger: CCTTCTACCATCAATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp AGTAGGAGGAGAGAGCCGCCTTCTGCCCTTGGAAGCCTTCTTCATTaGAAGAGTCTGAATCATACTGCCCTGTCTGGAGTGCACATGCAA +
Preference number: 5 (lower is better)
Translates to: SRRREPPSALGSLLH*KSLNHTALSGVHMQ
Trigger: TTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTCCTCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp GGCTCGCTCCTTGCTGTAGCTATGGCCTGGACTGGAAGAAGGTGGTaGAGACACAGTTGTAATGGAAGCATCACCGTTTTTCTCCATGGA +
Preference number: 5 (lower is better)
Translates to: GSLLAVAMAWTGRRW*RHSCNGSITVFLHG
Trigger: TCCATGGAGAAAAACGGTGATGCTTCCATTACAACTGTGTCTGCACCACCTTCTTCCAGTCCAGGCCATAGCTACAGCAAGGAGCGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp TCACTGGGCTCTTCAGAGGGATGGCCTTTCCTTTTCTTCAGCTTGTaGTTGGACTTCCGCTTCTCTTTCGCCCGTGCAGACTTTCTATGC +
Preference number: 5 (lower is better)
Translates to: SLGSSEGWPFLFFSL*LDFRFSFARADFLC
Trigger: GCATAGAAAGTCTGCACGGGCGAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGAAAAGGAAAGGCCATCCCTCTGAAGAGCCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATAGAGGGGCACCCGGAACAGCTCGTTGTGATAGAACCGACGGGATaGAGAGTGATGAGTCTCATGTGGGCGGAAATAATGGTGACCAAA +
Preference number: 5 (lower is better)
Translates to: IEGHPEQLVVIEPTG*RVMSLMWAEIMVTK
Trigger: TTTGGTCACCATTATTTCCGCCCACATGAGACTCATCACTCTCCATCCCGTCGGTTCTATCACAACGAGCTGTTCCGGGTGCCCCTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGCGTCACCTGCTTTCTaGAACAATTTTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRASPAF*NNFEES
Trigger: GGACTCTTCAAAATTGTTCAAGAAAGCAGGTGACGC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTAACTTCTTCGGTTTaGCCTTGGAAGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLTSSV*PWKTWK
Trigger: CTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTCCTGATCAAGTCCTaGCTAACCAATCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFLIKS*LTNPTV
Trigger: TACAGTTGGATTGGTTAGCAAGGACTTGATCAGGAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTCTTTCCTGATTCTTaGCTCAGCAGTCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFFPDS*LSSPTV
Trigger: TACAGTTGGACTGCTGAGCAAAGAATCAGGAAAGAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAATGTGGCAGCAAGACTaGAGACTGTATTGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRMWQQD*RLYCEA
Trigger: AGCTTCACAATACAGTCTCAAGTCTTGCTGCCACAT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCGCTGACATTGATTTGTaGCCCCAATTTAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPADIDL*PQFRAK
Trigger: TTTGGCTCTAAATTGGGGCAACAAATCAATGTCAGC...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCGCTCCCCAGCGCCACGCGCGAGCATCTCATACCCAGGTCTCGTGGTAATGTAGGCTCTTTGGGTCTATaGTTTTGTAAACATCAGAAT +
Preference number: 5 (lower is better)
Translates to: ALPSATREHLIPRSRGNVGSLGL*FCKHQN
Trigger: ATTCTGATGTTTACAAAACAATAGACCCAAAGAGCC...TACATTACCACGAGACCTGGGTATGAGATGCTCGCGCGTGGCGCTGGGGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAAATCTTGTTGGGGTGTaGATGTTTTCACTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRNLVGV*MFSLGS
Trigger: AGAGCCCAGTGAAAACATCAACACCCCAACAAGATT...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATCTCTCTGTTGGACATaGGCTTCATCTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRSLCWT*ASSVTV
Trigger: CACAGTTACAGATGAAGCCAATGTCCAACAGAGAGA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp AGCTTCAGGGGGACTCCTGGTTACAGGATTAACAGATACAGTAGGTaGCGAGGAAGGAAGGTTGCTTTCGCCTACTGCACTGAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SFRGTPGYRINRYSR*RGRKVAFAYCTEGR
Trigger: TCTCCCTTCAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCCTGTAACCAGGAGTCCCCCTGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp AGACTCGAGCTTACTTGGACTTTCAGTGGCAACAAATGGAGCCACTaGCAGGACAGGGGGTTTCATCTTCACTGGAGACCTCATCTGCCT +
Preference number: 5 (lower is better)
Translates to: RLELTWTFSGNKWSH*QDRGFHLHWRPHLP
Trigger: AGGCAGATGAGGTCTCCAGTGAAGATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GAGAGCCGCCTTCTGCCCTTGGAAGCCTTCTTCATTGCAAGAGTCTaGATCATACTGCCCTGTCTGGAGTGCACATGCAAATATGGCACT +
Preference number: 5 (lower is better)
Translates to: ESRLLPLEAFFIARV*IILPCLECTCKYGT
Trigger: AGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GATGCTGAGTGGATGTCACGGGTGTGCTTCACCTCCTCCTGCTTCTaGTGGATCTTTTCCCAGTTTCGCACCAAGAACACATGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: DAEWMSRVCFTSSCF*WIFSQFRTKNTWCF
Trigger: AAAGCACCATGTGTTCTTGGTGCGAAACTGGGAAAAGATCCATCAGAAGCAGGAGGAGGTGAAGCACACCCGTGACATCCACTCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATCAGAATACAGCCCAGCTCTCTGGTATTTCTTCTTTGGAGGACGTaGGGCCTTCTTTTCTCGTGGGATGAGAGCCAGCACAGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: IRIQPSSLVFLLWRT*GLLFSWDESQHRLQ
Trigger: TTGCAACCTGTGCTGGCTCTCATCCCACGAGAAAAGAAGGCCCCACGTCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTGTATTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp AAGCGTCTTGTTCGAACAGATCTAGCTGTCTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGACTTAATGTTCCCGTCGTCCCGACAG +
Preference number: 5 (lower is better)
Translates to: KRLVRTDLAVCRAEN*VMKTSDLMFPSSRQ
Trigger: CTGTCGGGACGACGGGAACATTAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGCTAGATCTGTTCGAACAAGACGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTCTTTCTCGATTCCGCTaGCGAGGATCCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCLSRFR*RGSSSS
Trigger: AGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAG...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAGGCCTACTGCTGCATaGAACATAGGCTTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LYSGNRGRESGSSSKCSERPTAA*NIGFFP
Trigger: AGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACACAGGAAGCCTTAAGTaGTTCCTGAGTGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNTGSLK*FLSGEQ
Trigger: CTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCTGGCTCAGAACTATTaGATAGTGAGCTACAAGAAA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPLAQNY*IVSYKK
Trigger: TTTCTTGTAGCTCACTATCAAATAGTTCTGAGCCAG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCTTTCTGGTTGTAAAATaGGGGGTTCTTGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPFLVVK*GVLALL
Trigger: AAGAAGAGCAAGAACCCCCAATTTTACAACCAGAAA...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCCAGTCCATGTCCAGAGAGCAAGAGGCTGGACTTGATGGTGCCGTTGGATCCCCCTTTCTTGCTGACATaGATTTGTTGCCCCAATTTA +
Preference number: 5 (lower is better)
Translates to: PSPCPESKRLDLMVPLDPPFLLT*ICCPNL
Trigger: TAAATTGGGGCAACAAATCAATGTCAGCAAGAAAGG...GGGATCCAACGGCACCATCAAGTCCAGCCTCTTGCTCTCTGGACATGGACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGAACTCCATTCACTGTaGAAGAAGTACTCTCAGATG +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRELHSL*KKYSQM
Trigger: CATCTGAGAGTACTTCTTCAACAGTGAATGGAGTTC...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTGCCACACCATGCACTaGTCACACTGGATCATGAGG +
Preference number: 5 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSCHTMH*SHWIMR
Trigger: CCTCATGATCCAGTGTGACAAGTGCATGGTGTGGCA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp CTGAATCATACTGCCCTGTCTGGAGTGCACATGCAAATATGGCACTaGGCTAGGTTCAACAAAGCCTGCGTCACTACTAACAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNHTALSGVHMQIWH*ARFNKACVTTNRAL
Trigger: CAGAGCCCTGTTAGTAGTGACGCAGGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp CTAATTCCCCAACCTTTTTCCTCAGCTCGAAATCGTTCCAGACACTaGACCCACTCATGCCTCTGTATCCTCTGGTTACAGCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LIPQPFSSARNRSRH*THSCLCILWLQHCS
Trigger: TGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATTTCGAGCTGAGGAAAAAGGTTGGGGAATTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp GCCACTGTCACTGGGAATGGTCTCGTCACTATGAGACTCACTAACTaGGGAAGGAGTGGCTTCTTTCAGGGATGTGAGTTCACTCAAATG +
Preference number: 5 (lower is better)
Translates to: ATVTGNGLVTMRLTN*GRSGFFQGCEFTQM
Trigger: CATTTGAGTGAACTCACATCCCTGAAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCATTCCCAGTGACAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp AACGTTTCAAAGACTCCAAGACGGATCTGGAAGAGCCACTATCCATaGAAACCTGGGGCTGTTCAGAACGGTGCTCTCTGTGTTTGTGAC +
Preference number: 5 (lower is better)
Translates to: NVSKTPRRIWKSHYP*KPGAVQNGALCVCD
Trigger: GTCACAAACACAGAGAGCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTTTGAAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp CGGAAGCTGACTGGGAACCTGCCAACGACTGTATTGCCCTTTCACTaGAAGGTAATGGTTCCTTTCTGTGAGGCCGATTTAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: RKLTGNLPTTVLPFH*KVMVPFCEADLVQY
Trigger: ATACTGCACTAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTTGAAGAGTCCCATTTaGAAGGGCAGTGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: LYSGNRGRESGSSSKCSELKSPI*KGSAHS
Trigger: AGAATGAGCACTGCCCTTCAAAATGGGACTCTTCAA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTTTCACAGAGTCCTTATaGATCAGGCCTACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCFTESL*IRPTAA
Trigger: TGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGAA...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTGCTGCTTTTCATGTTTaGAGGTTTCAAAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCAAFHV*RFQRLP
Trigger: GGGGAGCCTTTGAAACCTCAAAACATGAAAAGCAGC...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGACTGGCTCAGAACTATTaGATAGTGAGCTACAAGAAA +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRLAQNY*IVSYKK
Trigger: TTTCTTGTAGCTCACTATCAAATAGTTCTGAGCCAG...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNAHFPS*ALHSFN
Trigger: GTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTGC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACGAGAGCCAGCACAGGTaGCAAGGTATTTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNESQHR*QGIFRF
Trigger: GAACCTGAAAATACCTTGCAACCTGTGCTGGCTCTC...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGTCTCTCTGTTGGACATaGGCTTCATCTGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: LYSGNRGRESGSSSKCSESLCWT*ASSVTV
Trigger: CACAGTTACAGATGAAGCCAATGTCCAACAGAGAGA...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTGCTCTGAGAAGTTCCTCTCTCTGTaGGACATTGGCTTCATCTGT +
Preference number: 5 (lower is better)
Translates to: LYSGNRGRESGSSSKCSEKFLSL*DIGFIC
Trigger: ACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTT...CTCAGAGCACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp ACTGGGGAAGGAGTGGCTTCTTTCAGGGATGTGAGTTCACTCAAATaGGAAGGAGAATTTGGCAACAAAGTAGGAGGAGAGAGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: TGEGVASFRDVSSLK*EGEFGNKVGGESRL
Trigger: AAGGCGGCTCTCTCCTCCTACTTTGTTGCCAAATTCTCCTTCTCATTTGAGTGAACTCACATCCCTGAAAGAAGCCACTCCTTCCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp GACCTTTTACGAGTAGGGCTACAATTTGTGCTTTCTGATGATCGCTaGGAAGGTTTATCGGAAGCTGACTGGGAACCTGCCAACGACTGT +
Preference number: 5 (lower is better)
Translates to: DLLRVGLQFVLSDDR*EGLSEADWEPANDC
Trigger: ACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGAAAGCACAAATTGTAGCCCTACTCGTAAAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp TTTGTAAACATCAGAATACAGCCCAGCTCTCTGGTATTTCTTCTTTaGAGGACGTGGGGCCTTCTTTTCTCGTGGGATGAGAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: FVNIRIQPSSLVFLL*RTWGLLFSWDESQH
Trigger: GTGCTGGCTCTCATCCCACGAGAAAAGAAGGCCCCACGTCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTGTATTCTGATGTTTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAGAGGCACCTCCTATTaGAAAGTCAGGAGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSRGTSY*KVRRSA
Trigger: TGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp CCTCTCCGCCTCCCTGGTTCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGATGTTTGTGTTTTTCTTaGAGACTGTTTAGGACGGTA +
Preference number: 5 (lower is better)
Translates to: PLRLPGSTDSTLGTEVGRCLCFS*RLFRTV
Trigger: TACCGTCCTAAACAGTCTCAAAGAAAAACACAAACA...TCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGAACCAGGGAGGCGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTTTCCTTTTCTTCAGCTaGTGCTTGGACTTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSFLFFS*CLDFRF
Trigger: GAAGCGGAAGTCCAAGCACAAGCTGAAGAAAAGGAA...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp ACTGGAGAAAGCTTCTTAGACAAAGGATTACTTTCCCCCTGTGAATaGAGATGGATGCTTTCTTCGGCTTGGCAGTCGATGGCTGTAGCG +
Preference number: 5 (lower is better)
Translates to: TGESFLDKGLLSPCE*RWMLSSAWQSMAVA
Trigger: CGCTACAGCCATCGACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCACAGGGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCTCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp AACGACTGTATTGCCCTTTCACTGGAAGGTAATGGTTCCTTTCTGTaGGGCCGATTTAGTGCAGTATCTTGTACAGGAAAGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: NDCIALSLEGNGSFL*GRFSAVSCTGKSPG
Trigger: CCCTGGGCTCTTTCCTGTACAAGATACTGCACTAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp CTTGAAGACTGGCTACCTTTATGGCTAGGGAGTCCGTTCATCCGTTaGCTCTTGCCTCCAATGATTCCTCGACACTTCTCAAAACCACAT +
Preference number: 5 (lower is better)
Translates to: LEDWLPLWLGSPFIR*LLPPMIPRHFSKPH
Trigger: ATGTGGTTTTGAGAAGTGTCGAGGAATCATTGGAGGCAAGAGTCAACGGATGAACGGACTCCCTAGCCATAAAGGTAGCCAGTCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp TATCCTTACCAAATCGGTAACGTTTCAAAGACTCCAAGACGGATCTaGAAGAGCCACTATCCATGGAAACCTGGGGCTGTTCAGAACGGT +
Preference number: 5 (lower is better)
Translates to: YPYQIGNVSKTPRRI*KSHYPWKPGAVQNG
Trigger: ACCGTTCTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTTTGAAACGTTACCGATTTGGTAAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp GCACCAAGAACACATGGTGCTTTAGCACGAAGTTCCTCTCTCTGTTaGACATTGGCTTCATCTGTAACTGTGGAGTCAATCTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: APRTHGALARSSSLC*TLASSVTVESILLG
Trigger: CCCCAACAAGATTGACTCCACAGTTACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTTCGTGCTAAAGCACCATGTGTTCTTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp CTCGTTGTGATAGAACCGACGGGATGGAGAGTGATGAGTCTCATGTaGGCGGAAATAATGGTGACCAAAGGCAAACCGTTCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LVVIEPTGWRVMSLM*AEIMVTKGKPFFFF
Trigger: GAAAAAGAAGAACGGTTTGCCTTTGGTCACCATTATTTCCGCCCACATGAGACTCATCACTCTCCATCCCGTCGGTTCTATCACAACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTAAGTTCCTCTCTCTGTaGGACATTGGCTTCATCTGT +
Preference number: 5 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSKFLSL*DIGFIC
Trigger: ACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTT...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGGTGAGAAGTCTCTTTaGGGAGTGAGCTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPGEKSL*GVSFLG
Trigger: CCCCAAGAAGCTCACTCCCAAAAGAGACTTCTCACC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTTTTAGGGGTGGCTTaGAGCGTTCAGACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLLGVA*SVQTSR
Trigger: CCTGGAAGTCTGAACGCTCAAAGCCACCCCTAAAAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp CTGAAGGGAGATTTAGCTGTAGAGGCATCAGAGGCACCTCCTATTTaGAAGTCAGGAGAAGTGCAATACACAGGAGGCTGCTTTTCATGT +
Preference number: 5 (lower is better)
Translates to: LKGDLAVEASEAPPI*KSGEVQYTGGCFSC
Trigger: ACATGAAAAGCAGCCTCCTGTGTATTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCTGATGCCTCTACAGCTAAATCTCCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp TTCTATGGTTCTCACTTTCAGACTCGAGCTTACTTGGACTTTCAGTaGCAACAAATGGAGCCACTGACAGGACAGGGGGTTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: FYGSHFQTRAYLDFQ*QQMEPLTGQGVSSS
Trigger: TGAAGATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGAACCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACTAAGTCTAGTCCTTTaGGAGACCGGCATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPLSLVL*ETGMCF
Trigger: GAAGCACATGCCGGTCTCCAAAAGGACTAGACTTAG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAGTGCTGGAAAGTACCAGTAGCTTCTGGCTACTCCAAGTGTGGTCCTCCTGTTGTTTATTAAGTTCTTaGAAGGAGAGAGATGAGGGC +
Preference number: 5 (lower is better)
Translates to: EVLESTSSFWLLQVWSSCCLLSS*KERDEG
Trigger: GCCCTCATCTCTCTCCTTCAAAGAACTTAATAAACA...ACAGGAGGACCACACTTGGAGTAGCCAGAAGCTACTGGTACTTTCCAGCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPAHFPS*ALHSFN
Trigger: GTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTGC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGGGTCACAGCTGTGGTaGATGAATCTGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPGSQLW*MNLASF
Trigger: AAATGAGGCCAGATTCATCAACCACAGCTGTGACCC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp ATGTACTGGAGAAAGCTTCTTAGACAAAGGATTACTTTCCCCCTGTaGATGAAGATGGATGCTTTCTTCGGCTTGGCAGTCGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: MYWRKLLRQRITFPL*MKMDAFFGLAVDGC
Trigger: ACAGCCATCGACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCACAGGGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCTCCAGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp TGTAGTTGTCTGGGACATAATGAGGTGAGAAGTCTCTTTTGGGAGTaGGCTTCTTGGGGAAATGATCAAAGGCATAGGGTTTGGTGCAGA +
Preference number: 5 (lower is better)
Translates to: CSCLGHNEVRSLFWE*ASWGNDQRHRVWCR
Trigger: TCTGCACCAAACCCTATGCCTTTGATCATTTCCCCAAGAAGCTCACTCCCAAAAGAGACTTCTCACCTCATTATGTCCCAGACAACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TCTACTGACTCTACTCTGGGAACAGAGGTAGGGAGAGTGGCAGCAGTTCTAAGTCCAAGTCCTAATTTCTaGCCAGACTCTTTATTCACT +
Preference number: 5 (lower is better)
Translates to: STDSTLGTEVGRVAAVLSPSPNF*PDSLFT
Trigger: AGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGG...ACTTAGAACTGCTGCCACTCTCCCTACCTCTGTTCCCAGAGTAGAGTCAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAGCTGCTTTTCATGTTTaGAGGTTTCAAAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPAAFHV*RFQRLP
Trigger: GGGGAGCCTTTGAAACCTCAAAACATGAAAAGCAGC...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTTTCTGGTTGTAAAATaGGGGGTTCTTGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNFLVVK*GVLALL
Trigger: AAGAAGAGCAAGAACCCCCAATTTTACAACCAGAAA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCACATTTAAGACGGTTTTaGGTTTCCGCCCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPHLRRF*VSAPFS
Trigger: AGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATG...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACTGTTTATTAAGTTCTTaGAAGGAGAGAGATGAGGGC +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNCLLSS*KERDEG
Trigger: GCCCTCATCTCTCTCCTTCAAAGAACTTAATAAACA...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp TCCGAATCTCACTTAGACGACTTATCAGCTCCTCTAGTTCTGCGATaGAGTCTGGATCCTGCCTATTTCGAAGCTGGGGATATTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SESHLDDLSAPLVLR*SLDPAYFEAGDISF
Trigger: AAAAGAAATATCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGGAGCTGATAAGTCGTCTAAGTGAGATTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GTAATGGAAGCATCACCGTTTTTCTCCATGGACTCTTGCTCATCGTaGTGTACTATCCGCTGCAACAGACTGTCTACAGAATCATCCATA +
Preference number: 5 (lower is better)
Translates to: VMEASPFFSMDSCSS*CTIRCNRLSTESSI
Trigger: TATGGATGATTCTGTAGACAGTCTGTTGCAGCGGATAGTACATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTGATGCTTCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp TTTCAGAGACTCAGGAAGTTCTTGACTGTCATGATTACTTATGTTTaGACTACAGGAAGCCTTAAGTTGTTCCTGAGTGGGGAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FQRLRKFLTVMITYV*TTGSLKLFLSGEQC
Trigger: GCACTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCATGACAGTCAAGAACTTCCTGAGTCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCAATGTGGCAGCAAGACTaGAGACTGTATTGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPMWQQD*RLYCEA
Trigger: AGCTTCACAATACAGTCTCAAGTCTTGCTGCCACAT...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAAGCCGCCTTCTGCCCTaGGAAGCCTTCTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLSRLLP*EAFFIA
Trigger: TGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCT...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGGGTCACAGCTGTGGTaGATGAATCTGGCCTCATTT +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTGSQLW*MNLASF
Trigger: AAATGAGGCCAGATTCATCAACCACAGCTGTGACCC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp TGTGGTCCTCCTGTCTCTGTTAACCCTCAGGAGAAGCCAGAGAGAGAAGTAAACACAGATATACACATCTaGTTCCTTTATTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: CGPPVSVNPQEKPEREVNTDIHI*FLYSFG
Trigger: CCCAAAGGAATAAAGGAACAAGATGTGTATATCTGT...GTTTACTTCTCTCTCTGGCTTCTCCTGAGGGTTAACAGAGACAGGAGGACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp GTTGTAATCATAGGTAAGCTCTGTCCCAGCTGGCATATCCTTAAGTaGATACAGTCCAATACGGTACACTCCATTAACAGACCATTTCTG +
Preference number: 5 (lower is better)
Translates to: VVIIGKLCPSWHILK*IQSNTVHSINRPFL
Trigger: CAGAAATGGTCTGTTAATGGAGTGTACCGTATTGGACTGTATGCACTTAAGGATATGCCAGCTGGGACAGAGCTTACCTATGATTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTGACGAGGAAGGAAGGTaGCTTTCGCCTACTGCACTG +
Preference number: 5 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFDEEGR*LSPTAL
Trigger: CAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTC...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGACGAGGAAGGAAGGTaGCTTTCGCCTACTGCACTG +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHDEEGR*LSPTAL
Trigger: CAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCATTTAAGACGGTTTTaGGTTTCCGCCCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTHLRRF*VSAPFS
Trigger: AGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTTCGAACACCATGGAAGCCTTCTTCATaGCAAGAGTCTGAATCATAC +
Preference number: 5 (lower is better)
Translates to: NSVSICSDVVLCPAFRTPWKPSS*QESESY
Trigger: GTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCA...TGGTGTTCGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATAGCCGCCTTCTGCCCTaGGAAGCCTTCTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHSRLLP*EAFFIA
Trigger: TGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp ACTGCCAACAAGAGATGGTGCTGCACTAATGTAATCTGCCATTTGTaGATGTACTGGAGAAAGCTTCTTAGACAAAGGATTACTTTCCCC +
Preference number: 5 (lower is better)
Translates to: TANKRWCCTNVICHL*MYWRKLLRQRITFP
Trigger: GGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCTCCAGTACATTCACAAATGGCAGATTACATTAGTGCAGCACCATCTCTTGTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GCTGAAGACTTACTCAACTTTGGCAATCGGCGTTTAAGGAAGTCATaGTCGACGAATGATGATGCTCCGATAGTTTTCATAAACTTCGCT +
Preference number: 5 (lower is better)
Translates to: AEDLLNFGNRRLRKS*STNDDAPIVFINFA
Trigger: AGCGAAGTTTATGAAAACTATCGGAGCATCATCATTCGTCGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGTAAGTCTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 90 bp GACAAACTGGGAGAACTTTCTGAGCAGTCAATTTGTAAAGGTGTTTaGAATCCCAAGGCTAAAGAACTTGATTCTGAAGGCTCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: DKLGELSEQSICKGV*NPKAKELDSEGSRE
Trigger: TTCTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGGGATTGCAAACACCTTTACAAATTGACTGCTCAGAAAGTTCTCCCAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAACAGGAAGCCTTAAGTaGTTCCTGAGTGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSTGSLK*FLSGEQ
Trigger: CTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTGCCTGCTGAGCTGTTaGTTCAAGCACAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHCLLSC*FKHSKA
Trigger: AGCCTTGCTGTGCTTGAACAAACAGCTCAGCAGGCA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCATGCCTGCTGAGCTGTTaGTTCAAGCACAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSCLLSC*FKHSKA
Trigger: AGCCTTGCTGTGCTTGAACAAACAGCTCAGCAGGCA...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 90 bp ATTGAAGGAATGAAAGTTGTAATCATAGGTAAGCTCTGTCCCAGCTaGCATATCCTTAAGTGCATACAGTCCAATACGGTACACTCCATT +
Preference number: 5 (lower is better)
Translates to: IEGMKVVIIGKLCPS*HILKCIQSNTVHSI
Trigger: AATGGAGTGTACCGTATTGGACTGTATGCACTTAAGGATATGCCAGCTGGGACAGAGCTTACCTATGATTACAACTTTCATTCCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATTCTTCGTAACATCCTaGGCCACTAGGCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLFFVTS*ATRPTV
Trigger: TACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTACAGACTCGAGCTTACTaGGACTTTCAGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLQTRAY*DFQWQQ
Trigger: TTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTG...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGCTGACATTGATTTGTaGCCCCAATTTAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTADIDL*PQFRAK
Trigger: TTTGGCTCTAAATTGGGGCAACAAATCAATGTCAGC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCGAACTCCATTCACTGTaGAAGAAGTACTCTCAGATG +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTELHSL*KKYSQM
Trigger: CATCTGAGAGTACTTCTTCAACAGTGAATGGAGTTC...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATTTCCGAGCTTGGCGTaGCATAGCTTCAACTACACT +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLFPSLA*HSFNYT
Trigger: AGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAAA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAGAGTCCGTTCATCCGTaGACTCTTGCCTCCAATGAT +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSESVHP*TLASND
Trigger: ATCATTGGAGGCAAGAGTCAACGGATGAACGGACTC...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCATCACAGATCTCTTaGAAGATCTGTGCTAGGCGC +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPSQIS*KICARR
Trigger: GCGCCTAGCACAGATCTTCAAAGAGATCTGTGATGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp AACCCAACTGCTGTGCTAAGAGCTGGCTTTTTAATTAAGTCTTTATaGATTATTCCAGCTATAGAGCCAACACCTGGTTTCCTGATCAAG +
Preference number: 5 (lower is better)
Translates to: NPTAVLRAGFLIKSL*IIPAIEPTPGFLIK
Trigger: CTTGATCAGGAAACCAGGTGTTGGCTCTATAGCTGGAATAATTCATAAAGACTTAATTAAAAAGCCAGCTCTTAGCACAGCAGTTGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp CCCAATTTAGAGCCAAATGTGGCAGCAAGACTTGAGACTGTATTGTaGAGCTTGGACTGCACTTTTCCTTTATTACTTGATTCTACAGAA +
Preference number: 5 (lower is better)
Translates to: PNLEPNVAARLETVL*SLDCTFPLLLDSTE
Trigger: TTCTGTAGAATCAAGTAATAAAGGAAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACATTTGGCTCTAAATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTTCACAGAGTCCTTATaGATCAGGCCTACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFFTESL*IRPTAA
Trigger: TGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGAA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTAATCTTTACTGCCCAGTaGTCCTGCCATAGGACAATT +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLIFTAQ*SCHRTI
Trigger: AATTGTCCTATGGCAGGACAACTGGGCAGTAAAGAT...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCCCTTTCTTGCTGACATaGATTTGTTGCCCCAATTTA +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTPFLLT*ICCPNL
Trigger: TAAATTGGGGCAACAAATCAATGTCAGCAAGAAAGG...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCAAGGCTAAAGAACTaGATTCTGAAGGCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPRLKN*ILKALE
Trigger: CTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTTTCCTTTTCTTCAGCTaGTGCTTGGACTTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFFLFFS*CLDFRF
Trigger: GAAGCGGAAGTCCAAGCACAAGCTGAAGAAAAGGAA...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTGAAGAGTCCCATTTaGAAGGGCAGTGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLKSPI*KGSAHS
Trigger: AGAATGAGCACTGCCCTTCAAAATGGGACTCTTCAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATCTAACTTCTTCGGTTTaGCCTTGGAAGACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLTSSV*PWKTWK
Trigger: CTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAG...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GCTAGACTTTCAAGGATTGAGATGCAAGCCTTTATGCAATTACATCCAATGTTATGGAAGCCTTCTTCATaGCAAGAGTCTGAATCATAC +
Preference number: 5 (lower is better)
Translates to: ARLSRIEMQAFMQLHPMLWKPSS*QESESY
Trigger: GTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCA...TAACATTGGATGTAATTGCATAAAGGCTTGCATCTCAATCCTTGAAAGTCTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAATCTTGTTGGGGTGTaGATGTTTTCACTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSNLVGV*MFSLGS
Trigger: AGAGCCCAGTGAAAACATCAACACCCCAACAAGATT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCAAAACATCTCTCCCAATaGGGGATTTACGCCCATAGT +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSKHLSQ*GIYAHS
Trigger: ACTATGGGCGTAAATCCCCAATTGGGAGAGATGTTT...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GGACACCGGAACTATACAGTTAAGAAAATAAGAGTAGTGTTTCAGTCGGTAACCACAGATATACACATCTaGTTCCTTTATTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GHRNYTVKKIRVVFQSVTTDIHI*FLYSFG
Trigger: CCCAAAGGAATAAAGGAACAAGATGTGTATATCTGT...GGTTACCGACTGAAACACTACTCTTATTTTCTTAACTGTATAGTTCCGGTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTCCTGATCAAGTCCTaGCTAACCAATCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHFLIKS*LTNPTV
Trigger: TACAGTTGGATTGGTTAGCAAGGACTTGATCAGGAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTCTTTCCTGATTCTTaGCTCAGCAGTCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHFFPDS*LSSPTV
Trigger: TACAGTTGGACTGCTGAGCAAAGAATCAGGAAAGAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 90 bp GAGGTTTCAAAGGCTCCCCTTTCACTAGATGAGAAATTGTCTTGCTaGATGCATGTTCCTTCATTAAACATTTCTTTCTCCAAATTAGTA +
Preference number: 5 (lower is better)
Translates to: EVSKAPLSLDEKLSC*MHVPSLNISFSKLV
Trigger: TACTAATTTGGAGAAAGAAATGTTTAATGAAGGAACATGCATTCAGCAAGACAATTTCTCATCTAGTGAAAGGGGAGCCTTTGAAACCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGCTTTTTGAATTTTACTTGTAAAGAGACAGTATGGTCTGGTAACTTCTGGTCACCAAGTCCTAATTTCTaGCCAGACTCTTTATTCACT +
Preference number: 5 (lower is better)
Translates to: SFLNFTCKETVWSGNFWSPSPNF*PDSLFT
Trigger: AGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGG...TGACCAGAAGTTACCAGACCATACTGTCTCTTTACAAGTAAAATTCAAAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATTTAAAAGTAATGGGTTaGGAACCAACTGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHLKVMG*EPTVKK
Trigger: CTTCTTCACAGTTGGTTCCAAACCCATTACTTTTAA...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGGCTCTTTGGGTCTATaGTTTTGTAAACATCAGAAT +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHGSLGL*FCKHQN
Trigger: ATTCTGATGTTTACAAAACAATAGACCCAAAGAGCC...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTTCCATTTAATGCTAGACTTTCAAGGATTGAGATGCAAGCCTTTACTGTGATTATGATATaGCTCAATCATCCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: EKLFPFNARLSRIEMQAFTVIMI*LNHPVP
Trigger: AGGAACAGGATGATTGAGCAATATCATAATCACAGT...AAAGGCTTGCATCTCAATCCTTGAAAGTCTAGCATTAAATGGAAACAACTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS-3UTR CAA 90 bp AGGAAATATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATACTGTGATTATGATATaGCTCAATCATCCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: RKYISSIYIFRNHTAYRHTVIMI*LNHPVP
Trigger: AGGAACAGGATGATTGAGCAATATCATAATCACAGT...ATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATATTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CGGGCTGACAAACTGGGCGGCCTGGAAGGCTTGCATTaGCACCACTGCTTGGAGGGGGCATTTCCGAGGTCG +
Preference number: 6 (lower is better)
Translates to: RADKLGGLEGLH*HHCLEGAFPRS
Trigger: CGACCTCGGAAATGCCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CGTGCCCGCTCTCCTTCTCGGAGACTGAGGTCTCGCTaGTGTCGGCCTCACTGGCCGTTTCTCCCACAATCT +
Preference number: 6 (lower is better)
Translates to: RARSPSRRLRSR*CRPHWPFLPQS
Trigger: AGATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCAGCGAGACCTCAGTCTCCGAGAAGGAGAGCGGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GCCGTTCCCTCTGGCTGTGCCTTCGCTCCTCAGGTGTaGTGGCTAACTGGGCTTCTTGACTGCTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: AVPSGCAFAPQV*WLTGLLDCSPL
Trigger: CAGAGGAGAGCAGTCAAGAAGCCCAGTTAGCCAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GTCTGTAGGACTGACGGACTGGGTGGCCATCAGGCGTaGGCCGACTGTCCCTCATCAGGTACACACAATCAC +
Preference number: 6 (lower is better)
Translates to: VCRTDGLGGHQA*ADCPSSGTHNH
Trigger: GTGATTGTGTGTACCTGATGAGGGACAGTCGGCGCACGCCTGATGGCCACCCAGTCCGTCAGTCCTACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp TTGAGCAGGATCTGGTTGAGCCGTTCCCTCTGGCTGTaGCTTCGCTCCTCAGGTGTGCTGGCTAACTGGGCT +
Preference number: 6 (lower is better)
Translates to: LSRIWLSRSLWL*LRSSGVLANWA
Trigger: AGCCCAGTTAGCCAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp TCTCGGAGACTGAGGTCTCGCTGCTGTCGGCCTCACTaGCCGTTTCTCCCACAATCTCATCGATCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: SRRLRSRCCRPH*PFLPQSHRSEP
Trigger: CGGCTCAGATCGATGAGATTGTGGGAGAAACGGCCAGTGAGGCCGACAGCAGCGAGACCTCAGTCTCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp AGGAGGTTGAGCAGGATCTGGTTGAGCCGTTCCCTCTaGCTGTGCCTTCGCTCCTCAGGTGTGCTGGCTAAC +
Preference number: 6 (lower is better)
Translates to: RRLSRIWLSRSL*LCLRSSGVLAN
Trigger: GTTAGCCAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GGGAGGATCTGTCCTAATGCTGACCCAGCTGCCTGCTaGGCTGTTTGTTCAAGCACAGCAAGGCTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: GRICPNADPAAC*AVCSSTARLAG
Trigger: CCCTGCCAGCCTTGCTGTGCTTGAACAAACAGCTCAGCAGGCAGCTGGGTCAGCATTAGGACAGATCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CCACCATCCAACCATAAGCCATCTCTGGAGGTACGCTaGGGTAGGTGCTCATGGAAAGGAGAGGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: PPSNHKPSLEVR*GRCSWKGEGSC
Trigger: GCAGGACCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGTTGGATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CCTTCATTCAATTCCGGGCTGACAAACTGGGCGGCCTaGAAGGCTTGCATTGACACCACTGCTTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PSFNSGLTNWAA*KACIDTTAWRG
Trigger: CCCCCTCCAAGCAGTGGTGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp GTTCCCTCTGGCTGTGCCTTCGCTCCTCAGGTGTGCTaGCTAACTGGGCTTCTTGACTGCTCTCCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: VPSGCAFAPQVC*LTGLLDCSPLV
Trigger: AACCAGAGGAGAGCAGTCAAGAAGCCCAGTTAGCCAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CCTGACGAAGCAGCAAGTCATCTCGGAGTAAACAGATaGAGTAGACACAGCCGGGCTGGGCATAGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: PDEAASHLGVNR*SRHSRAGHSGA
Trigger: GGCCCCACTATGCCCAGCCCGGCTGTGTCTACTTCATCTGTTTACTCCGAGATGACTTGCTGCTTCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp ACACACAGCAGGTCCCAACTACGGCCTCCAAGGGAATaGTCTCATAGAGGGGCACCCGGAACAGCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: THSRSQLRPPRE*SHRGAPGTARC
Trigger: ACAACGAGCTGTTCCGGGTGCCCCTCTATGAGATCATTCCCTTGGAGGCCGTAGTTGGGACCTGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CTGCTTGGAGGGGGCATTTCCGAGGTCGACCTGGTCTaGGTTTCACAAAATTGTTTCCTGTCCTGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LLGGGISEVDLV*VSQNCFLSWPA
Trigger: GGCAGGCCAGGACAGGAAACAATTTTGTGAAACGCAGACCAGGTCGACCTCGGAAATGCCCCCTCCAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CGCTGCCCGAGCCACTTCCAGGTTTTCCTCTGCAGCTaGCAAGCGTCTTGTTCGAACAGATCTAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: RCPSHFQVFLCS*QASCSNRSSCL
Trigger: CAGACAGCTAGATCTGTTCGAACAAGACGCTTGGCAGCTGCAGAGGAAAACCTGGAAGTGGCTCGGGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GCAGGGACATGTCTTCGCCTTCATTCAATTCCGGGCTaGCAAACTGGGCGGCCTGGAAGGCTTGCATTGACA +
Preference number: 6 (lower is better)
Translates to: AGTCLRLHSIPG*QTGRPGRLALT
Trigger: TGTCAATGCAAGCCTTCCAGGCCGCCCAGTTTGTCAGCCCGGAATTGAATGAAGGCGAAGACATGTCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp TCCACATCCGTGTTCACACCCATGCAGTCGCAGTGCTaGCACACCATGCACTTGTCACACTGGATCATGAGG +
Preference number: 6 (lower is better)
Translates to: STSVFTPMQSQC*HTMHLSHWIMR
Trigger: CCTCATGATCCAGTGTGACAAGTGCATGGTGTGGCAGCACTGCGACTGCATGGGTGTGAACACGGATGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CAGCCCAGCTCTCTGGTATTTCTTCTTTGGAGGACGTaGGGCCTTCTTTTCTCGTGGGATGAGAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: QPSSLVFLLWRT*GLLFSWDESQH
Trigger: GTGCTGGCTCTCATCCCACGAGAAAAGAAGGCCCCACGTCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp TTCCCAGGTATTTTCTCAAGGAGGTTGAGCAGGATCTaGTTGAGCCGTTCCCTCTGGCTGTGCCTTCGCTCC +
Preference number: 6 (lower is better)
Translates to: FPGIFSRRLSRI*LSRSLWLCLRS
Trigger: GGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCTCCTTGAGAAAATACCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GAGCCATCCTCCTTTCCTGCTTCTGTGCCCCTTTCTCGATTCCGCTaGCGAGGATCCTCTTCTTCTGTGGCACCCTCTATCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: EPSSFPASVPLSRFR*RGSSSSVAPSISAS
Trigger: AGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GCATTTTTCCCAGGTATTTTCTCAAGGAGGTTGAGCAGGATCTGGTaGAGCCGTTCCCTCTGGCTGTGCCTTCGCTCCTCAGGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: AFFPGIFSRRLSRIW*SRSLWLCLRSSGVL
Trigger: CAGCACACCTGAGGAGCGAAGGCACAGCCAGAGGGAACGGCTCAACCAGATCCTGCTCAACCTCCTTGAGAAAATACCTGGGAAAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CCTTTCCTGCTTCTGTGCCCCTTTCTCGATTCCGCTTaGGAGGATCCTCTTCTTCTGTGGCACCCTCTATCT +
Preference number: 6 (lower is better)
Translates to: PFLLLCPFLDSA*EDPLLLWHPLS
Trigger: AGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp ACCCACTCATGCCTCTGTATCCTCTGGTTACAGCACTaGTCACCACAGGGGCAAGTGTTAGGGGAACACTCA +
Preference number: 6 (lower is better)
Translates to: THSCLCILWLQH*SPQGQVLGEHS
Trigger: TGAGTGTTCCCCTAACACTTGCCCCTGTGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GCTCCTCAGGTGTGCTGGCTAACTGGGCTTCTTGACTaGTCTCCTCTGGTTTCTTTTCAGCGTCCCCAATGT +
Preference number: 6 (lower is better)
Translates to: APQVCWLTGLLD*SPLVSFQRPQC
Trigger: ACATTGGGGACGCTGAAAAGAAACCAGAGGAGAGCAGTCAAGAAGCCCAGTTAGCCAGCACACCTGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp GTGTTTGTGCTCCACCATCCAACCATAAGCCATCTCTaGAGGTACGCTGGGGTAGGTGCTCATGGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: VFVLHHPTISHL*RYAGVGAHGKE
Trigger: CTCCTTTCCATGAGCACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGTTGGATGGTGGAGCACAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp TCCTTTCCTGCTTCTGTGCCCCTTTCTCGATTCCGCTaGCGAGGATCCTCTTCTTCTGTGGCACCCTCTATC +
Preference number: 6 (lower is better)
Translates to: SFPASVPLSRFR*RGSSSSVAPSI
Trigger: GATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp CTGGGCTCTTCAGAGGGATGGCCTTTCCTTTTCTTCAGCTTGTGCTaGGACTTCCGCTTCTCTTTCGCCCGTGCAGACTTTCTATGCGTG +
Preference number: 6 (lower is better)
Translates to: LGSSEGWPFLFFSLC*DFRFSFARADFLCV
Trigger: CACGCATAGAAAGTCTGCACGGGCGAAAGAGAAGCGGAAGTCCAAGCACAAGCTGAAGAAAAGGAAAGGCCATCCCTCTGAAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp AGTGCTGCCACACCATGCACTTGTCACACTGGATCATaGGGCCTTCATCTTTATAGAGGCCGCAGATGCAGC +
Preference number: 6 (lower is better)
Translates to: SAATPCTCHTGS*GLHLYRGRRCS
Trigger: GCTGCATCTGCGGCCTCTATAAAGATGAAGGCCTCATGATCCAGTGTGACAAGTGCATGGTGTGGCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GCGAGGATCCTCTTCTTCTGTGGCACCCTCTATCTCTaGTTCTCTTTTGCTGGCCAGAGTGCCAGGATTGAT +
Preference number: 6 (lower is better)
Translates to: ARILFFCGTLYL*FSFAGQSARID
Trigger: ATCAATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CTAGAAGGCTGTCTGATTTACCTAAGGCTCGCTCCTTaGTGTAGCTATGGCCTGGACTGGAAGAAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LEGCLIYLRLAP*CSYGLDWKKVV
Trigger: CACCACCTTCTTCCAGTCCAGGCCATAGCTACAGCAAGGAGCGAGCCTTAGGTAAATCAGACAGCCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GCCTCGATCACATCAGTGACTGTGTCTGGACTTAGGTaGAGGGACATGTCTTCGCCTTCATTCAATTCCGGG +
Preference number: 6 (lower is better)
Translates to: ASITSVTVSGLR*RDMSSPSFNSG
Trigger: CCCGGAATTGAATGAAGGCGAAGACATGTCCCTGCACCTAAGTCCAGACACAGTCACTGATGTGATCGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp TCAGCTCGAAATCGTTCCAGACACTGCACCCACTCATaGCTCTGTATCCTCTGGTTACAGCACTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: SARNRSRHCTHS*LCILWLQHCSP
Trigger: TGGTGAGCAGTGCTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATTTCGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp TTGGACTGGAAACTCGAGCTTAGGCTTTCAGCAACCTaGCAGTGTTTGTCTGGTGCAGTGACTGCACCAAGC +
Preference number: 6 (lower is better)
Translates to: LDWKLELRLSAT*QCLSGAVTAPS
Trigger: GCTTGGTGCAGTCACTGCACCAGACAAACACTGCCAGGTTGCTGAAAGCCTAAGCTCGAGTTTCCAGTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp AAGACTCCAAGACGGATCTGGAAGAGCCACTATCCATaGAAACCTGGGGCTGTTCAGAACGGTGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: KTPRRIWKSHYP*KPGAVQNGALC
Trigger: ACAGAGAGCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp GCAGTCATCCCCACAGCCCTTCCTGGTGTCGTCATCTaGCTTCTTACAATTACAGGTGGTAGCCTCATAACC +
Preference number: 6 (lower is better)
Translates to: AVIPTALPGVVI*LLTITGGSLIT
Trigger: GGTTATGAGGCTACCACCTGTAATTGTAAGAAGCCAGATGACGACACCAGGAAGGGCTGTGGGGATGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CACCCGGAACAGCTCGTTGTGATAGAACCGACGGGATaGAGAGTGATGAGTCTCATGTGGGCGGAAATAATG +
Preference number: 6 (lower is better)
Translates to: HPEQLVVIEPTG*RVMSLMWAEIM
Trigger: CATTATTTCCGCCCACATGAGACTCATCACTCTCCATCCCGTCGGTTCTATCACAACGAGCTGTTCCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GAGAGAGCCGCCTTCTGCCCTTGGAAGCCTTCTTCATaGCAAGAGTCTGAATCATACTGCCCTGTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: ERAAFCPWKPSS*QESESYCPVWS
Trigger: ACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GGGAAGGTTTATCGGAAGCTGACTGGGAACCTGCCAACGACTGTATaGCCCTTTCACTGGAAGGTAATGGTTCCTTTCTGTGAGGCCGAT +
Preference number: 6 (lower is better)
Translates to: GKVYRKLTGNLPTTV*PFHWKVMVPFCEAD
Trigger: ATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CCAATGCCACTGTCACTGGGAATGGTCTCGTCACTATaGGACTCACTAACTGGGGAAGGAGTGGCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: PMPLSLGMVSSL*DSLTGEGVASF
Trigger: GAAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCATTCCCAGTGACAGTGGCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GGTTCACACTCTGAACCACAGCCTCGATCACATCAGTaGCTGTGTCTGGACTTAGGTGCAGGGACATGTCTT +
Preference number: 6 (lower is better)
Translates to: GSHSEPQPRSHQ*LCLDLGAGTCL
Trigger: AAGACATGTCCCTGCACCTAAGTCCAGACACAGTCACTGATGTGATCGAGGCTGTGGTTCAGAGTGTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp TGGATGTCACGGGTGTGCTTCACCTCCTCCTGCTTCTaGTGGATCTTTTCCCAGTTTCGCACCAAGAACACA +
Preference number: 6 (lower is better)
Translates to: WMSRVCFTSSCF*WIFSQFRTKNT
Trigger: TGTGTTCTTGGTGCGAAACTGGGAAAAGATCCATCAGAAGCAGGAGGAGGTGAAGCACACCCGTGACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp TCTGATGATCGCTGGGAAGGTTTATCGGAAGCTGACTaGGAACCTGCCAACGACTGTATTGCCCTTTCACTG +
Preference number: 6 (lower is better)
Translates to: SDDRWEGLSEAD*EPANDCIALSL
Trigger: CAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CGAGTAGGGCTACAATTTGTGCTTTCTGATGATCGCTaGGAAGGTTTATCGGAAGCTGACTGGGAACCTGCC +
Preference number: 6 (lower is better)
Translates to: RVGLQFVLSDDR*EGLSEADWEPA
Trigger: GGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGAAAGCACAAATTGTAGCCCTACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GGCCTTCTTTTCTCGTGGGATGAGAGCCAGCACAGGTaGCAAGGTATTTTCAGGTTCAGAAGGTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GLLFSWDESQHR*QGIFRFRRFSR
Trigger: CCTGCTGAACCTTCTGAACCTGAAAATACCTTGCAACCTGTGCTGGCTCTCATCCCACGAGAAAAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp CTGGCTACCTTTATGGCTAGGGAGTCCGTTCATCCGTaGACTCTTGCCTCCAATGATTCCTCGACACTTCTC +
Preference number: 6 (lower is better)
Translates to: LATFMARESVHP*TLASNDSSTLL
Trigger: GAGAAGTGTCGAGGAATCATTGGAGGCAAGAGTCAACGGATGAACGGACTCCCTAGCCATAAAGGTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp CAAGGCTGGCAGGGCTACCAGAAAGCAGGCCATTTAAGACGGTTTTaGGTTTCCGCCCCCTTCTCTTCCCTATGTAAATGGTTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: QGWQGYQKAGHLRRF*VSAPFSSLCKWFLS
Trigger: AGAAAGGAACCATTTACATAGGGAAGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATGGCCTGCTTTCTGGTAGCCCTGCCAGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GGGCGCTGTAATAGGCCTTTCGTAAGCGGCAAACATCTCTCCCAATaGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAAGACCT +
Preference number: 6 (lower is better)
Translates to: GRCNRPFVSGKHLSQ*GIYAHSTSQHSERP
Trigger: AGGTCTTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAATTGGGAGAGATGTTTGCCGCTTACGAAAGGCCTATTACAGCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp AGGGCAAAGCATCATCTTCTTGTCCTAGGTCTTTTAGGGGTGGCTTaGAGCGTTCAGACTTCCAGGATGATCGTCCTCCGTTCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RAKHHLLVLGLLGVA*SVQTSRMIVLRSSC
Trigger: ACAAGAGGAACGGAGGACGATCATCCTGGAAGTCTGAACGCTCAAAGCCACCCCTAAAAGACCTAGGACAAGAAGATGATGCTTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GGGACTCCTGGTTACAGGATTAACAGATACAGTAGGTaGCGAGGAAGGAAGGTTGCTTTCGCCTACTGCACT +
Preference number: 6 (lower is better)
Translates to: GTPGYRINRYSR*RGRKVAFAYCT
Trigger: AGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCCTGTAACCAGGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp ACTGCCCTGTCTGGAGTGCACATGCAAATATGGCACTaGGCTAGGTTCAACAAAGCCTGCGTCACTACTAAC +
Preference number: 6 (lower is better)
Translates to: TALSGVHMQIWH*ARFNKACVTTN
Trigger: GTTAGTAGTGACGCAGGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp TGGCTACCTTTATGGCTAGGGAGTCCGTTCATCCGTTaGCTCTTGCCTCCAATGATTCCTCGACACTTCTCA +
Preference number: 6 (lower is better)
Translates to: WLPLWLGSPFIR*LLPPMIPRHFS
Trigger: TGAGAAGTGTCGAGGAATCATTGGAGGCAAGAGTCAACGGATGAACGGACTCCCTAGCCATAAAGGTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CAACCTTTTTCCTCAGCTCGAAATCGTTCCAGACACTaGACCCACTCATGCCTCTGTATCCTCTGGTTACAG +
Preference number: 6 (lower is better)
Translates to: QPFSSARNRSRH*THSCLCILWLQ
Trigger: CTGTAACCAGAGGATACAGAGGCATGAGTGGGTGCAGTGTCTGGAACGATTTCGAGCTGAGGAAAAAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp TCTCACTTTCAGACTCGAGCTTACTTGGACTTTCAGTaGCAACAAATGGAGCCACTGACAGGACAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: SHFQTRAYLDFQ*QQMEPLTGQGV
Trigger: AACCCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp ACTGGGAATGGTCTCGTCACTATGAGACTCACTAACTaGGGAAGGAGTGGCTTCTTTCAGGGATGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: TGNGLVTMRLTN*GRSGFFQGCEF
Trigger: GAACTCACATCCCTGAAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCATTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp ATCAGAATACAGCCCAGCTCTCTGGTATTTCTTCTTTaGAGGACGTGGGGCCTTCTTTTCTCGTGGGATGAG +
Preference number: 6 (lower is better)
Translates to: IRIQPSSLVFLL*RTWGLLFSWDE
Trigger: CTCATCCCACGAGAAAAGAAGGCCCCACGTCCTCCAAAGAAGAAATACCAGAGAGCTGGGCTGTATTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp GTTCGAACAGATCTAGCTGTCTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGACTTAATGTTCCCGTCG +
Preference number: 6 (lower is better)
Translates to: VRTDLAVCRAEN*VMKTSDLMFPS
Trigger: CGACGGGAACATTAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGCTAGATCTGTTCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp ATAGAACCGACGGGATGGAGAGTGATGAGTCTCATGTaGGCGGAAATAATGGTGACCAAAGGCAAACCGTTC +
Preference number: 6 (lower is better)
Translates to: IEPTGWRVMSLM*AEIMVTKGKPF
Trigger: GAACGGTTTGCCTTTGGTCACCATTATTTCCGCCCACATGAGACTCATCACTCTCCATCCCGTCGGTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp CAGGGCTACCAGAAAGCAGGCCATTTAAGACGGTTTTaGGTTTCCGCCCCCTTCTCTTCCCTATGTAAATGG +
Preference number: 6 (lower is better)
Translates to: QGYQKAGHLRRF*VSAPFSSLCKW
Trigger: CCATTTACATAGGGAAGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATGGCCTGCTTTCTGGTAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp CATCATCTTCTTGTCCTAGGTCTTTTAGGGGTGGCTTaGAGCGTTCAGACTTCCAGGATGATCGTCCTCCGT +
Preference number: 6 (lower is better)
Translates to: HHLLVLGLLGVA*SVQTSRMIVLR
Trigger: ACGGAGGACGATCATCCTGGAAGTCTGAACGCTCAAAGCCACCCCTAAAAGACCTAGGACAAGAAGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp ACCAATCCAACTGTAGTGCCAGTTCCTAACTTCTTCGGTTTTGCCTaGGAAGACTTGGAAGGAGGACAGGTAGCAATGAGCTGTGCCAAC +
Preference number: 6 (lower is better)
Translates to: TNPTVVPVPNFFGFA*EDLEGGQVAMSCAN
Trigger: GTTGGCACAGCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAGGAACTGGCACTACAGTTGGATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp AGTCACTGCTACTTCTATGGTTCTCACTTTCAGACTCGAGCTTACTaGGACTTTCAGTGGCAACAAATGGAGCCACTGACAGGACAGGGG +
Preference number: 6 (lower is better)
Translates to: SHCYFYGSHFQTRAY*DFQWQQMEPLTGQG
Trigger: CCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGAACCATAGAAGTAGCAGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GATTTAGCTGTAGAGGCATCAGAGGCACCTCCTATTTaGAAGTCAGGAGAAGTGCAATACACAGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: DLAVEASEAPPI*KSGEVQYTGGC
Trigger: GCAGCCTCCTGTGTATTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCTGATGCCTCTACAGCTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CTTCTGCCCTTGGAAGCCTTCTTCATTGCAAGAGTCTaGATCATACTGCCCTGTCTGGAGTGCACATGCAAA +
Preference number: 6 (lower is better)
Translates to: LLPLEAFFIARV*IILPCLECTCK
Trigger: TTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CACTTAGACGACTTATCAGCTCCTCTAGTTCTGCGATaGAGTCTGGATCCTGCCTATTTCGAAGCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: HLDDLSAPLVLR*SLDPAYFEAGD
Trigger: ATCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGGAGCTGATAAGTCGTCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CAAATCGGTAACGTTTCAAAGACTCCAAGACGGATCTaGAAGAGCCACTATCCATGGAAACCTGGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: QIGNVSKTPRRI*KSHYPWKPGAV
Trigger: AACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTTTGAAACGTTACCGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp ACTGGGAACCTGCCAACGACTGTATTGCCCTTTCACTaGAAGGTAATGGTTCCTTTCTGTGAGGCCGATTTA +
Preference number: 6 (lower is better)
Translates to: TGNLPTTVLPFH*KVMVPFCEADL
Trigger: TAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CTTCTGTCTGAGATACTTTCCAACATGAATGGGCGCTaGGAACAACCCATACTCGTGCTCTCCTGGAGTATA +
Preference number: 6 (lower is better)
Translates to: LLSEILSNMNGR*EQPILVLSWSI
Trigger: TATACTCCAGGAGAGCACGAGTATGGGTTGTTCCCAGCGCCCATTCATGTTGGAAAGTATCTCAGACAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp ACTGTAGTGCCAGTTCCTAACTTCTTCGGTTTTGCCTaGGAAGACTTGGAAGGAGGACAGGTAGCAATGAGC +
Preference number: 6 (lower is better)
Translates to: TVVPVPNFFGFA*EDLEGGQVAMS
Trigger: GCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAGGAACTGGCACTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp CTTTCTTCGGCTTGGCAGTCGATGGCTGTAGCGTCACCTGCTTTCTaGAACAATTTTGAAGAGTCCCATTTTGAAGGGCAGTGCTCATTC +
Preference number: 6 (lower is better)
Translates to: LSSAWQSMAVASPAF*NNFEESHFEGQCSF
Trigger: GAATGAGCACTGCCCTTCAAAATGGGACTCTTCAAAATTGTTCAAGAAAGCAGGTGACGCTACAGCCATCGACTGCCAAGCCGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp ACTAGCCCTGGAACAATACCAATGCCTAGCTTCTTTCCTGATTCTTaGCTCAGCAGTCCAACTGTAGTGATAGCCCCTGGCTTTTTGCCT +
Preference number: 6 (lower is better)
Translates to: TSPGTIPMPSFFPDS*LSSPTVVIAPGFLP
Trigger: AGGCAAAAAGCCAGGGGCTATCACTACAGTTGGACTGCTGAGCAAAGAATCAGGAAAGAAGCTAGGCATTGGTATTGTTCCAGGGCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp CTGGTTACAGGATTAACAGATACAGTAGGTGACGAGGAAGGAAGGTaGCTTTCGCCTACTGCACTGAAGGGAGATTTAGCTGTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: LVTGLTDTVGDEEGR*LSPTALKGDLAVEA
Trigger: TGCCTCTACAGCTAAATCTCCCTTCAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCCTGTAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp CGCACCAAGAACACATGGTGCTTTAGCACGAAGTTCCTCTCTCTGTaGGACATTGGCTTCATCTGTAACTGTGGAGTCAATCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: RTKNTWCFSTKFLSL*DIGFICNCGVNLVG
Trigger: CCCAACAAGATTGACTCCACAGTTACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTTCGTGCTAAAGCACCATGTGTTCTTGGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GCACCCTCTATCTCTGCTTCTCTTTTGCTGGCCAGAGTGCCAGGATaGATGGTAGAAGGACTCTTTCTTGAAAATCCTTCGGAATCAGAA +
Preference number: 6 (lower is better)
Translates to: APSISASLLLARVPG*MVEGLFLENPSESE
Trigger: TTCTGATTCCGAAGGATTTTCAAGAAAGAGTCCTTCTACCATCAATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp ACTGTAGTGCCAGTTCCTAACTTCTTCGGTTTTGCCTTGGAAGACTaGGAAGGAGGACAGGTAGCAATGAGCTGTGCCAACTTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: TVVPVPNFFGFALED*EGGQVAMSCANFSV
Trigger: AACAGAAAAGTTGGCACAGCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAGGAACTGGCACTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp ACTGAAGGGAGATTTAGCTGTAGAGGCATCAGAGGCACCTCCTATTaGAAAGTCAGGAGAAGTGCAATACACAGGAGGCTGCTTTTCATG +
Preference number: 6 (lower is better)
Translates to: TEGRFSCRGIRGTSY*KVRRSAIHRRLLFM
Trigger: CATGAAAAGCAGCCTCCTGTGTATTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCTGATGCCTCTACAGCTAAATCTCCCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GCATCACCGTTTTTCTCCATGGACTCTTGCTCATCGTaGTGTACTATCCGCTGCAACAGACTGTCTACAGAA +
Preference number: 6 (lower is better)
Translates to: ASPFFSMDSCSS*CTIRCNRLSTE
Trigger: TTCTGTAGACAGTCTGTTGCAGCGGATAGTACATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp TGGAAGCCTTCTTCATTGCAAGAGTCTGAATCATACTaGCCTGTCTGGAGTGCACATGCAAATATGGCACTG +
Preference number: 6 (lower is better)
Translates to: WKPSSLQESESY*PVWSAHANMAL
Trigger: CAGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp CAGGCCTACTGCTGCATTGAACATAGGCTTTTTCCCTaGATCTTTAGTTACCAACCCAACTGCTGTGCTAAG +
Preference number: 6 (lower is better)
Translates to: QAYCCIEHRLFP*IFSYQPNCCAK
Trigger: CTTAGCACAGCAGTTGGGTTGGTAACTAAAGATCCAGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GCTATAGAGCCAACACCTGGTTTCCTGATCAAGTCCTaGCTAACCAATCCAACTGTAGTGCCAGTTCCTAAC +
Preference number: 6 (lower is better)
Translates to: AIEPTPGFLIKS*LTNPTVVPVPN
Trigger: GTTAGGAACTGGCACTACAGTTGGATTGGTTAGCAAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GGATTAACAGATACAGTAGGTGACGAGGAAGGAAGGTaGCTTTCGCCTACTGCACTGAAGGGAGATTTAGCT +
Preference number: 6 (lower is better)
Translates to: GLTDTVGDEEGR*LSPTALKGDLA
Trigger: AGCTAAATCTCCCTTCAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp AGGTTCATATGTTCATCACTGCTGGCTGGCTCAGAATaGGGAGTAAATCCTCCAAGGGACAAACTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: RFICSSLLAGSE*GVNPPRDKLGE
Trigger: TTCTCCCAGTTTGTCCCTTGGAGGATTTACTCCCAATTCTGAGCCAGCCAGCAGTGATGAACATATGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp AATAGGCCTTTCGTAAGCGGCAAACATCTCTCCCAATaGGGGATTTACGCCCATAGTACTTCTCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: NRPFVSGKHLSQ*GIYAHSTSQHS
Trigger: GGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAATTGGGAGAGATGTTTGCCGCTTACGAAAGGCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp GATTCTTTGCTCAGCAGTCCAACTGTAGTGATAGCCCCTGGCTTTTaGCCTAAGTCTTTATTAATGAATACGGCTGTAGTGCCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: DSLLSSPTVVIAPGF*PKSLLMNTAVVPVP
Trigger: GGGAACTGGCACTACAGCCGTATTCATTAATAAAGACTTAGGCAAAAAGCCAGGGGCTATCACTACAGTTGGACTGCTGAGCAAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp ACCAATCCCATTGCTGAGCTTGCTACAATCTTCTTCGTAACATCCTaGGCCACTAGGCCAACTGTAGAACTCAGTTTCTTTCCCAACTCT +
Preference number: 6 (lower is better)
Translates to: TNPIAELATIFFVTS*ATRPTVELSFFPNS
Trigger: AGAGTTGGGAAAGAAACTGAGTTCTACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAAGATTGTAGCAAGCTCAGCAATGGGATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp AGACACAGTTGTAATGGAAGCATCACCGTTTTTCTCCATGGACTCTaGCTCATCGTGATGTACTATCCGCTGCAACAGACTGTCTACAGA +
Preference number: 6 (lower is better)
Translates to: RHSCNGSITVFLHGL*LIVMYYPLQQTVYR
Trigger: TCTGTAGACAGTCTGTTGCAGCGGATAGTACATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTGATGCTTCCATTACAACTGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GGAAGACTTGGAAGGAGGACAGGTAGCAATGAGCTGTaGCAACTTTTCTGTTACACTAGTTCCTCCATTAAG +
Preference number: 6 (lower is better)
Translates to: GRLGRRTGSNEL*QLFCYTSSSIK
Trigger: CTTAATGGAGGAACTAGTGTAACAGAAAAGTTGGCACAGCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp ATCAGCTCCTCTAGTTCTGCGATGAAGTCTGGATCCTaGCTATTTCGAAGCTGGGGATATTTCTTTTTCCGT +
Preference number: 6 (lower is better)
Translates to: ISSSSSAMKSGS*LFRSWGYFFFR
Trigger: ACGGAAAAAGAAATATCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGGAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp TGGATCTTTTCCCAGTTTCGCACCAAGAACACATGGTaGTTTAGCACGAAGTTCCTCTCTCTGTTGGACATT +
Preference number: 6 (lower is better)
Translates to: WIFSQFRTKNTW*FSTKFLSLLDI
Trigger: AATGTCCAACAGAGAGAGGAACTTCGTGCTAAAGCACCATGTGTTCTTGGTGCGAAACTGGGAAAAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp ACACATGGTGCTTTAGCACGAAGTTCCTCTCTCTGTTaGACATTGGCTTCATCTGTAACTGTGGAGTCAATC +
Preference number: 6 (lower is better)
Translates to: THGALARSSSLC*TLASSVTVESI
Trigger: GATTGACTCCACAGTTACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTTCGTGCTAAAGCACCATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp TGTAATGGAAGCATCACCGTTTTTCTCCATGGACTCTaGCTCATCGTGATGTACTATCCGCTGCAACAGACT +
Preference number: 6 (lower is better)
Translates to: CNGSITVFLHGL*LIVMYYPLQQT
Trigger: AGTCTGTTGCAGCGGATAGTACATCACGATGAGCAAGAGTCCATGGAGAAAAACGGTGATGCTTCCATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp AGAAAGCTTCTTAGACAAAGGATTACTTTCCCCCTGTaGATGAAGATGGATGCTTTCTTCGGCTTGGCAGTC +
Preference number: 6 (lower is better)
Translates to: RKLLRQRITFPL*MKMDAFFGLAV
Trigger: GACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCACAGGGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp ATTGCCCTTTCACTGGAAGGTAATGGTTCCTTTCTGTaGGGCCGATTTAGTGCAGTATCTTGTACAGGAAAG +
Preference number: 6 (lower is better)
Translates to: IALSLEGNGSFL*GRFSAVSCTGK
Trigger: CTTTCCTGTACAAGATACTGCACTAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp ATAGGTAAGCTCTGTCCCAGCTGGCATATCCTTAAGTaGATACAGTCCAATACGGTACACTCCATTAACAGA +
Preference number: 6 (lower is better)
Translates to: IGKLCPSWHILK*IQSNTVHSINR
Trigger: TCTGTTAATGGAGTGTACCGTATTGGACTGTATGCACTTAAGGATATGCCAGCTGGGACAGAGCTTACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp GCTTCTTGGGGAAATGATCAAAGGCATAGGGTTTGGTaGAGACCGGATATCGATTCCGATGAATCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: ASWGNDQRHRVW*RPDIDSDESCK
Trigger: TTTACAAGATTCATCGGAATCGATATCCGGTCTGCACCAAACCCTATGCCTTTGATCATTTCCCCAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp CTCAGCAGTCCAACTGTAGTGATAGCCCCTGGCTTTTaGCCTAAGTCTTTATTAATGAATACGGCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: LSSPTVVIAPGF*PKSLLMNTAVV
Trigger: CACTACAGCCGTATTCATTAATAAAGACTTAGGCAAAAAGCCAGGGGCTATCACTACAGTTGGACTGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp TACTTCTATGGTTCTCACTTTCAGACTCGAGCTTACTaGGACTTTCAGTGGCAACAAATGGAGCCACTGACA +
Preference number: 6 (lower is better)
Translates to: YFYGSHFQTRAY*DFQWQQMEPLT
Trigger: TGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGAACCATAGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp AACACATGGTGCTTTAGCACGAAGTTCCTCTCTCTGTaGGACATTGGCTTCATCTGTAACTGTGGAGTCAAT +
Preference number: 6 (lower is better)
Translates to: NTWCFSTKFLSL*DIGFICNCGVN
Trigger: ATTGACTCCACAGTTACAGATGAAGCCAATGTCCAACAGAGAGAGGAACTTCGTGCTAAAGCACCATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp TTTCTTGGTGGCCAAGATTTTGTCATAATTGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCAACTACACTTCTCTTGATGTGATGGGG +
Preference number: 6 (lower is better)
Translates to: FLGGQDFVIIAHFPS*ALHSFNYTSLDVMG
Trigger: CCCCATCACATCAAGAGAAGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTGCAATTATGACAAAATCTTGGCCACCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp CTTATGTTTGCACTACAGGAAGCCTTAAGTTGTTCCTaGGTGGGGAGCAGTGCTTCAGATTTAAGGTTTAAG +
Preference number: 6 (lower is better)
Translates to: LMFALQEALSCS*VGSSASDLRFK
Trigger: CTTAAACCTTAAATCTGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS GCA 72 bp CTCAGGAAGTTCTTGACTGTCATGATTACTTATGTTTaGACTACAGGAAGCCTTAAGTTGTTCCTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: LRKFLTVMITYV*TTGSLKLFLSG
Trigger: CCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCATGACAGTCAAGAACTTCCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp TTCACAGAGTCCTTATTGATCAGGCCTACTGCTGCATaGAACATAGGCTTTTTCCCTGGATCTTTAGTTACC +
Preference number: 6 (lower is better)
Translates to: FTESLLIRPTAA*NIGFFPGSLVT
Trigger: GGTAACTAAAGATCCAGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp TTAACCAGTCCAACTACGGTGCCAAGTCCTAATTTCTaGCCAGACTCTTTATTCACTAGCCCTGGAACAATA +
Preference number: 6 (lower is better)
Translates to: LTSPTTVPSPNF*PDSLFTSPGTI
Trigger: TATTGTTCCAGGGCTAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGGCACCGTAGTTGGACTGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp ATTGCTGAGCTTGCTACAATCTTCTTCGTAACATCCTaGGCCACTAGGCCAACTGTAGAACTCAGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IAELATIFFVTS*ATRPTVELSFF
Trigger: AAAGAAACTGAGTTCTACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAAGATTGTAGCAAGCTCAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp AACTCTTTATTAACCAGTCCAACTACGGTGCCAAGTCCTAATTTCTaGCCAGACTCTTTATTCACTAGCCCTGGAACAATACCAATGCCT +
Preference number: 6 (lower is better)
Translates to: NSLLTSPTTVPSPNF*PDSLFTSPGTIPMP
Trigger: AGGCATTGGTATTGTTCCAGGGCTAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGGCACCGTAGTTGGACTGGTTAATAAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GGTATTTTTAAAGTCCTTTTAGGTGGACCTTCTAGCTaGGGCATTTCCTTGGATTTAGGTCTTCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: GIFKVLLGGPSS*GISLDLGLPLL
Trigger: CAAGAGAGGAAGACCTAAATCCAAGGAAATGCCTCAGCTAGAAGGTCCACCTAAAAGGACTTTAAAAATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp GAGCCAAATGTGGCAGCAAGACTTGAGACTGTATTGTaGAGCTTGGACTGCACTTTTCCTTTATTACTTGAT +
Preference number: 6 (lower is better)
Translates to: EPNVAARLETVL*SLDCTFPLLLD
Trigger: ATCAAGTAATAAAGGAAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACATTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CCA 72 bp GTCTTTATGAATTATTCCAGCTATAGAGCCAACACCTaGTTTCCTGATCAAGTCCTTGCTAACCAATCCAAC +
Preference number: 6 (lower is better)
Translates to: VFMNYSSYRANT*FPDQVLANQSN
Trigger: GTTGGATTGGTTAGCAAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATAGCTGGAATAATTCATAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp ATGATTACTTATGTTTGCACTACAGGAAGCCTTAAGTaGTTCCTGAGTGGGGAGCAGTGCTTCAGATTTAAG +
Preference number: 6 (lower is better)
Translates to: MITYVCTTGSLK*FLSGEQCFRFK
Trigger: CTTAAATCTGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GGCCAAGATTTTGTCATAATTGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCAACTACACTTCTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GQDFVIIAHFPS*ALHSFNYTSLD
Trigger: ATCAAGAGAAGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTGCAATTATGACAAAATCTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 90 bp AGCAGTCAATTTGTAAAGGTGTTTGCAATCCCAAGGCTAAAGAACTaGATTCTGAAGGCTCTCGAGAAACCCACTGTTCTTCTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: SSQFVKVFAIPRLKN*ILKALEKPTVLLCL
Trigger: TAAACAGAGAAGAACAGTGGGTTTCTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGGGATTGCAAACACCTTTACAAATTGACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp TTACTCAACTTTGGCAATCGGCGTTTAAGGAAGTCATaGTCGACGAATGATGATGCTCCGATAGTTTTCATA +
Preference number: 6 (lower is better)
Translates to: LLNFGNRRLRKS*STNDDAPIVFI
Trigger: TATGAAAACTATCGGAGCATCATCATTCGTCGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS CAA 72 bp GATTTTGTCATAATTGCACATTTTCCGAGCTTGGCGTaGCATAGCTTCAACTACACTTCTCTTGATGTGATG +
Preference number: 6 (lower is better)
Translates to: DFVIIAHFPSLA*HSFNYTSLDVM
Trigger: CATCACATCAAGAGAAGTGTAGTTGAAGCTATGCAACGCCAAGCTCGGAAAATGTGCAATTATGACAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7
CDS TCA 72 bp AAGGCTCCCCTTTCACTAGATGAGAAATTGTCTTGCTaGATGCATGTTCCTTCATTAAACATTTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KAPLSLDEKLSC*MHVPSLNISFS
Trigger: GGAGAAAGAAATGTTTAATGAAGGAACATGCATTCAGCAAGACAATTTCTCATCTAGTGAAAGGGGAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090933.5
ENSMUST00000186583.7