Pregenerated sensors for ASGR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040963Ensembl transcript IDs: ENSMUST00000102572.8, ENSMUST00000124721.2, ENSMUST00000143772.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGGGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGCTCCAGTATCCCCAGTaGGGATGTTGGGGTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GGFSVFLRYETIEPCPFQLQYPQ*GCWGGV Trigger: CACACCACCCCAACATCCTCACTGGGGATACTGGAG...CTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGTTTGTGAGGATGTTGGGGTaGTGTGGGGCTGGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GFSVFLRYETIEPCPFQFVRMLG*CGAGGR Trigger: CCTACCTCCAGCCCCACACCACCCCAACATCCTCAC...AAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| 3UTR CCA 72 bp | TGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTaGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCC | + |
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Preference number: 3 (lower is better) Translates to: CPFQFSITPPHA*DPVSLPCSSIP Trigger: GGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| 3UTR GCA 72 bp | GCCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATaGTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: AMPFPVFHNPSS*LGPCLSSLLQY Trigger: ATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| 3UTR GCA 72 bp | TTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATaGCCTTTCCAGTTTTCCATAACCCCTCCTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: FSVFLRYETIEP*PFQFSITPPHA Trigger: AGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGCCAACAGGAGGATGTTaGAGGCCAGGGCGAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: AWDPVSLPCSSIPSEDVGPTGGC*RPGRAD Trigger: GTCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGG...CCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGGCCTCCACCCTGTTCATaGCCCTGCCAGTTATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGTLSLFLAPVSPVRMLGPPPCS*PCQLSG Trigger: GCCAGATAACTGGCAGGGCCATGAACAGGGTGGAGG...CCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGCAGCCTCAGCCCAGGTaGGCCCATCCCGAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GGFSVFLRYETIEPCPFQQPQPR*AHPEKT Trigger: GGTTTTCTCGGGATGGGCTCACCTGGGCTGAGGCTG...CTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGGTGGAGCAGAGGCGCTaGGGAAAGGGCCTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GGFSVFLRYETIEPCPFQVEQRR*GKGLER Trigger: TCTTTCCAGGCCCTTTCCTCAGCGCCTCTGCTCCAC...CTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGGCCTTTAGCTGTTGCTaGTTCTCCTCCAGTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AWDPVSLPCSSIPSEDVGAFSCC*FSSSWA Trigger: AGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGC...CCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCGCTGAGGAAAGGGCCTaGAAAGAGGCTGCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSAEERA*KEAALS Trigger: GGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCTCAGC...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CATGCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTTGGGCGTTCTCCAGCTaGCAGTACTGGTCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HAWDPVSLPCSSIPSEDVWAFSS*QYWSAS Trigger: TGAGGCTGACCAGTACTGCCAGCTGGAGAACGCCCA...AACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCTTGATGACCAGCAGGTaGGCGTTCTCCAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSLMTSR*AFSSWQ Trigger: CTGCCAGCTGGAGAACGCCCACCTGCTGGTCATCAA...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR GCA 90 bp | CTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGGTCTGCCTTTAGCTGTTaGTGCTTCTCCTCCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LGTLSLFLAPVSPVRMLGSAFSC*CFSSSW Trigger: CCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGA...CCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GAGCCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCGTTCATCATCGCCACTaGGCTGATGGTCATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EPCPFQFSITPPHAWDPVVHHRH*ADGHSP Trigger: AGGAGAATGACCATCAGCTCAGTGGCGATGATGAAC...GACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GAGCCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCGGGAAGTGCTTCAGGTaGAAGAGCAATGTGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: EPCPFQFSITPPHAWDPVGKCFR*KSNVEW Trigger: CCATTCCACATTGCTCTTTCACCTGAAGCACTTCCC...GACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| 3UTR CAA 72 bp | ATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTaGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: MPFPVFHNPSSC*GPCLSSLLQYP Trigger: GGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CCTCATGCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATTGGAGGAAAAGTTGCTaGAGGTTTCTTTCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHAWDPVSLPCSSIPSEDWRKSC*RFLSGS Trigger: GGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCA...ATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGGGGTGAAAGAGCAATGTaGAATGGTCTGCCTTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGTLSLFLAPVSPVRMLGGERAM*NGLPLA Trigger: AGCTAAAGGCAGACCATTCCACATTGCTCTTTCACC...CCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCATGAAACCACACAGATaGCCACCAACAGGAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSMKPHR*PPTGGC Trigger: ACATCCTCCTGTTGGTGGTCATCTGTGTGGTTTCAT...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCAGTTATCTGGCTGAGTaGAGGCCCAATTCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSSYLAE*RPNSCS Trigger: ACTACAGGAATTGGGCCTTCACTCAGCCAGATAACT...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR GCA 90 bp | GAGCCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTTTACAACAAAGTCCTaGTCCTCCCTGGAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EPCPFQFSITPPHAWDPVFTTKS*SSLELM Trigger: CATCAACTCCAGGGAGGAGCAGGACTTTGTTGTAAA...GACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTGTATGCTTTGAGATaGAACCACACAGATGACCAC | + |
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Preference number: 4 (lower is better) Translates to: PCPFQFSITPPHAWDPVSLYALR*NHTDDH Trigger: GTGGTCATCTGTGTGGTTTCATCTCAAAGCATACAG...AGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCAGACCTATCCAAATATaGAACTGGCTCCTGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSRPIQI*NWLLCF Trigger: AAAGCACAGGAGCCAGTTTCATATTTGGATAGGTCT...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR GCA 90 bp | GTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGTTTTCCATAACCGGCCTGGAAAGAGGCTaGCCTTTCCAGTGTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: VFLRYETIEPCPFQFSITGLERG*PFQCGF Trigger: AAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCC...GGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | GTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGTTTTCCATAACCTGCTTCTCCTCCAGTTaGGCTAACCAGGAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VFLRYETIEPCPFQFSITCFSSS*ANQEVS Trigger: ACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCA...GGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CCA 90 bp | CATGCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTAAGTTGTCATTCCAATaGCCATCTGACAGGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: HAWDPVSLPCSSIPSEDVKLSFQ*PSDRIS Trigger: TGAAATCCTGTCAGATGGCCATTGGAATGACAACTT...AACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | CTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGTTTTCCATAACCCCTCCTTGCAGCTGTATGCTTTaGGATGAAACCACACAGATG | + |
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Preference number: 4 (lower is better) Translates to: LRYETIEPCPFQFSITPPCSCML*DETTQM Trigger: CATCTGTGTGGTTTCATCTCAAAGCATACAGCTGCA...AGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR TCA 90 bp | GGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGTTTATTCCAATGGCCATCTaGCAGGATTTCAGCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GFSVFLRYETIEPCPFQFIPMAI*QDFSTV Trigger: GACTGTGCTGAAATCCTGTCAGATGGCCATTGGAAT...AAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTCTTCCCCCAATTCCTGTAGTTaGTTCTATAATCAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PFPVFHNPSSCLGPCLSSPNSCS*FYNQFH Trigger: ATGGAACTGATTATAGAAGCAACTACAGGAATTGGG...GGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CAA 90 bp | GCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGGGTGCTCCTCCCTGGAGTaGATGACCAGCAGGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: AWDPVSLPCSSIPSEDVGCSSLE*MTSRWA Trigger: CGCCCACCTGCTGGTCATCAACTCCAGGGAGGAGCA...CCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS CCA 90 bp | GCTGTTGCTGCTTCTCCTCCAGTTGGGCTAACCAGGAAGTCAGTATaGCGTTTGTGCTACCTCCGAGGGTGTCCAGAGCCCCGAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: AVAASPPVGLTRKSV*RLCYLRGCPEPRTP Trigger: TGGAGTTCGGGGCTCTGGACACCCTCGGAGGTAGCACAAACGCCATACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 ENSMUST00000143772.8 |
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| CDS TCA 90 bp | CCAGCGGTTCACCTGCTGGCAGAAGTTGTCATTCCAATGGCCATCTaGCAGGATTTCAGCACAGTCTTCACCTCCACCCTGTTCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: PAVHLLAEVVIPMAI*QDFSTVFTSTLFMA Trigger: GGCCATGAACAGGGTGGAGGTGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000143772.8 |
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| CDS-3UTR CAA 90 bp | GGGGGATTCTCAGTCTTCCTAAGGTATGAGACCATAGAGCCATGCCCTTTCCAGACCAACAGGAGGATGTaGAAGGCCAGGGCGAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GGFSVFLRYETIEPCPFQTNRRM*KARASR Trigger: TCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGGT...CTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CAA 90 bp | CCTCATGCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGGGTTCGCAGATCCATaGGGAAGTGCTTCAGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: PHAWDPVSLPCSSIPSEDGFADP*GSASGE Trigger: TTCACCTGAAGCACTTCCCAATGGATCTGCGAACCC...ATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS CCA 90 bp | GAGGCGCTGAGGAAAGGGCCTGGAAAGAGGCTGCCCTTTCCAGTGTaGATTTTCTATCCTAGGATCCTGCACATGAGAGCCATGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: EALRKGPGKRLPFPV*IFYPRILHMRAMFI Trigger: GATGAACATGGCTCTCATGTGCAGGATCCTAGGATAGAAAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCTCAGCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CCA 90 bp | TCGCATACCCAGCGGTTCACCTGCTGGCAGAAGTTGTCATTCCAATaGCCATCTGACAGGATTTCAGCACAGTCTTCACCTCCACCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SHTQRFTCWQKLSFQ*PSDRISAQSSPPPC Trigger: ACAGGGTGGAGGTGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTGGGTATGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000143772.8 |
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| CDS TCA 90 bp | TGTCCAGAGCCCCGAACTCCATCAGGGTGCTGGAGGAAAAGTTGCTaGAGGTTTCTTTCAGGGTCCGAAACTCTTCTTGCAGCTGTATGC | + |
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Preference number: 5 (lower is better) Translates to: CPEPRTPSGCWRKSC*RFLSGSETLLAAVC Trigger: GCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGGCTCTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CCA 90 bp | AATGTGGAATGGTCTGCCTTTAGCTGTTGCTGCTTCTCCTCCAGTTaGGCTAACCAGGAAGTCAGTATGGCGTTTGTGCTACCTCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: NVEWSAFSCCCFSSS*ANQEVSMAFVLPPR Trigger: CCTCGGAGGTAGCACAAACGCCATACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCATTCCACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 ENSMUST00000143772.8 |
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| CDS-3UTR CAA 90 bp | CCATGCCCTTTCCAGTTTTCCATAACCCCTCCTCATGCTTGGGACCCTGTCTCTACCTGCTGGCAGAAGTaGTCATTCCAATGGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: PCPFQFSITPPHAWDPVSTCWQK*SFQWPS Trigger: AGATGGCCATTGGAATGACAACTTCTGCCAGCAGGT...AGAGACAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS-3UTR CAA 90 bp | CATGCTTGGGACCCTGTCTCTCTTCCTTGCTCCAGTATCCCCAGTGAGGATGTTGTGCTGGAGGAAAAGTaGCTGAAGGTTTCTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HAWDPVSLPCSSIPSEDVVLEEK*LKVSFR Trigger: CCTGAAAGAAACCTTCAGCAACTTTTCCTCCAGCAC...AACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS CCA 90 bp | AGCACAGTCTTCACCTCCACCCTGTTCATGGCCCTGCCAGTTATCTaGCTGAGTGAAGGCCCAATTCCTGTAGTTGCTTCTATAATCAGT | + |
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Preference number: 5 (lower is better) Translates to: STVFTSTLFMALPVI*LSEGPIPVVASIIS Trigger: ACTGATTATAGAAGCAACTACAGGAATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATGAACAGGGTGGAGGTGAAGACTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000143772.8 |
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| CDS TCA 90 bp | AAGGTTTCTTTCAGGGTCCGAAACTCTTCTTGCAGCTGTATGCTTTaGGATGAAACCACACAGATGACCACCAACAGGAGGATGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KVSFRVRNSSCSCML*DETTQMTTNRRMLK Trigger: CTTCAACATCCTCCTGTTGGTGGTCATCTGTGTGGTTTCATCTCAAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS TCA 72 bp | GCGAGCAGACTGAGGCGGAACGTGGAGCAGAGGCGCTaGGGAAAGGGCCTGGAAAGAGGCTGCCCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASRLRRNVEQRR*GKGLERGCPFQ Trigger: CTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCTCAGCGCCTCTGCTCCACGTTCCGCCTCAGTCTGCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CAA 90 bp | AGGGTGTCCAGAGCCCCGAACTCCATCAGGGTGCTGGAGGAAAAGTaGCTGAAGGTTTCTTTCAGGGTCCGAAACTCTTCTTGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RVSRAPNSIRVLEEK*LKVSFRVRNSSCSC Trigger: ACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGGCTCTGGACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS TCA 72 bp | GATCCTGCACATGAGAGCCATGTTCATCATCGCCACTaGGCTGATGGTCATTCTCCTCAGAGTCCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DPAHESHVHHRH*ADGHSPQSPAA Trigger: AGCAGCTGGACTCTGAGGAGAATGACCATCAGCTCAGTGGCGATGATGAACATGGCTCTCATGTGCAGGATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CCA 72 bp | AGGAAAGGGCCTGGAAAGAGGCTGCCCTTTCCAGTGTaGATTTTCTATCCTAGGATCCTGCACATGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKGPGKRLPFPV*IFYPRILHMRA Trigger: GGCTCTCATGTGCAGGATCCTAGGATAGAAAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CCA 72 bp | TTCACCTCCACCCTGTTCATGGCCCTGCCAGTTATCTaGCTGAGTGAAGGCCCAATTCCTGTAGTTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FTSTLFMALPVI*LSEGPIPVVAS Trigger: AGAAGCAACTACAGGAATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATGAACAGGGTGGAGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000143772.8 |
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| CDS TCA 72 bp | CCCCGAACTCCATCAGGGTGCTGGAGGAAAAGTTGCTaGAGGTTTCTTTCAGGGTCCGAAACTCTTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PRTPSGCWRKSC*RFLSGSETLLA Trigger: TGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS GCA 72 bp | ATGTTCCGTCTCTTTTCGCATACCCAGCGGTTCACCTaGTGGCAGAAGTTGTCATTCCAATGGCCATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: MFRLFSHTQRFT*WQKLSFQWPSD Trigger: GTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTGGGTATGCGAAAAGAGACGGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS CCA 72 bp | TGGTCTGCCTTTAGCTGTTGCTGCTTCTCCTCCAGTTaGGCTAACCAGGAAGTCAGTATGGCGTTTGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: WSAFSCCCFSSS*ANQEVSMAFVL Trigger: TAGCACAAACGCCATACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 ENSMUST00000143772.8 |
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| CDS CCA 72 bp | CAGCGGTTCACCTGCTGGCAGAAGTTGTCATTCCAATaGCCATCTGACAGGATTTCAGCACAGTCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: QRFTCWQKLSFQ*PSDRISAQSSP Trigger: AGGTGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000143772.8 |
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| CDS CAA 72 bp | AGAGCCCCGAACTCCATCAGGGTGCTGGAGGAAAAGTaGCTGAAGGTTTCTTTCAGGGTCCGAAACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RAPNSIRVLEEK*LKVSFRVRNSS Trigger: AGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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| CDS CAA 90 bp | TTCCGTCTCTTTTCGCATACCCAGCGGTTCACCTGCTGGCAGAAGTaGTCATTCCAATGGCCATCTGACAGGATTTCAGCACAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FRLFSHTQRFTCWQK*SFQWPSDRISAQSS Trigger: TGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTGGGTATGCGAAAAGAGACGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102572.8 |
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| CDS TCA 72 bp | GTCAGGGTTCGCAGATCCATTGGGAAGTGCTTCAGGTaGAAGAGCAATGTGGAATGGTCTGCCTTTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VRVRRSIGKCFR*KSNVEWSAFSC Trigger: ACAGCTAAAGGCAGACCATTCCACATTGCTCTTTCACCTGAAGCACTTCCCAATGGATCTGCGAACCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 ENSMUST00000143772.8 |
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| CDS GCA 72 bp | AAGAGCAATGTGGAATGGTCTGCCTTTAGCTGTTGCTaGTTCTCCTCCAGTTGGGCTAACCAGGAAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KSNVEWSAFSCC*FSSSWANQEVS Trigger: ACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCATTCCACATTGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 ENSMUST00000143772.8 |
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| CDS TCA 72 bp | TTCAGGGTCCGAAACTCTTCTTGCAGCTGTATGCTTTaGGATGAAACCACACAGATGACCACCAACAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FRVRNSSCSCML*DETTQMTTNRR Trigger: CCTCCTGTTGGTGGTCATCTGTGTGGTTTCATCTCAAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102572.8 ENSMUST00000124721.2 |
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