Pregenerated sensors for ASCC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038774Ensembl transcript IDs: ENSMUST00000035606.10, ENSMUST00000219226.2, ENSMUST00000220355.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCAGACATACCAGAAGTGGGCATCGGATTCCATTATAGATGGTTGTaGACCACCATGAGGTTGCTGGGAACTGAACTCAGGACCTCTGGA | + |
Preference number: 1 (lower is better) Translates to: SDIPEVGIGFHYRWL*TTMRLLGTELRTSG Trigger: TCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCTCATGGTGGTTCACAACCATCTATAATGGAATCCGATGCCCACTTCTGGTATGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR TCA 90 bp | GAGAGCTCACTATCAGTGACAGCGAAGAAGGTGAACATCCCATGTTaGCTATTGTGTCTAAAACGTTATTCTGGGCTGAGCAGTGCTAAG | + |
Preference number: 1 (lower is better) Translates to: ESSLSVTAKKVNIPC*LLCLKRYSGLSSAK Trigger: CTTAGCACTGCTCAGCCCAGAATAACGTTTTAGACACAATAGTCAACATGGGATGTTCACCTTCTTCGCTGTCACTGATAGTGAGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR CCA 90 bp | CTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTaGCTAACGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCC | + |
Preference number: 1 (lower is better) Translates to: LINLLQKAAVSKRPL*LTLLESSLQPLSIS Trigger: GGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACGTTAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR-3UTR CCA 90 bp | CGGTACCTCGTCCTGAAGTTCATCGCCGCTTTTAGCAGAAGCAAGCATGTCATACACTCTATCGTTACATaGGTTTTCTGCCATCTGGAC | + |
Preference number: 2 (lower is better) Translates to: RYLVLKFIAAFSRSKHVIHSIVT*VFCHLD Trigger: GTCCAGATGGCAGAAAACCCATGTAACGATAGAGTG...TATGACATGCTTGCTTCTGCTAAAAGCGGCGATGAACTTCAGGACGAGGTACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR-3UTR GCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTATGCTGGAATCATCACTaGAGCCGCTGTCAATTTCCT | + |
Preference number: 2 (lower is better) Translates to: KLINLLQKAAVSKRPLWLCWNHH*SRCQFP Trigger: AGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCA...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR CAA 90 bp | AGCAAAGATCTTCAACTCTTGCTGCTTCAGTCATTTCCTTTAACGTaGCGTTTAAGTACTTCTCAACTTCACACCACAATAGGGAGCCAT | + |
Preference number: 2 (lower is better) Translates to: SKDLQLLLLQSFPLT*RLSTSQLHTTIGSH Trigger: ATGGCTCCCTATTGTGGTGTGAAGTTGAGAAGTACTTAAACGCAACGTTAAAGGAAATGACTGAAGCAGCAAGAGTTGAAGATCTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR CAA 90 bp | CAGAAGCAAGCATGTCATATAGAGTACAGCAAAGATCTTCAACTCTaGCTGCTTCAGTCATTTCCTTTAACGTTGCGTTTAAGTACTTCT | + |
Preference number: 2 (lower is better) Translates to: QKQACHIEYSKDLQL*LLQSFPLTLRLSTS Trigger: AGAAGTACTTAAACGCAACGTTAAAGGAAATGACTGAAGCAGCAAGAGTTGAAGATCTTTGCTGTACTCTATATGACATGCTTGCTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR-3UTR TCA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCTTCGACTTGTTCACATaGCTGAACAGTCAAGACTCT | + |
Preference number: 2 (lower is better) Translates to: WKEHSIYFISTSYSVHIFFDLFT*LNSQDS Trigger: AGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAA...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR-3UTR CCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTCTAAAAGGCCTCTGTaGCTAACGTTGCTGGAATCA | + |
Preference number: 2 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQSKRPL*LTLLES Trigger: TGATTCCAGCAACGTTAGCCACAGAGGCCTTTTAGA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR-3UTR TCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAATCAGTGTGTGGTCTTTaGAAAATCATCATTGATCTC | + |
Preference number: 2 (lower is better) Translates to: EQDALYTGSKSPKSKLNKSVCGL*KIIIDL Trigger: GAGATCAATGATGATTTTTCAAAGACCACACACTGA...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR TCA 72 bp | CCAGAAGTGGGCATCGGATTCCATTATAGATGGTTGTaGACCACCATGAGGTTGCTGGGAACTGAACTCAGG | + |
Preference number: 3 (lower is better) Translates to: PEVGIGFHYRWL*TTMRLLGTELR Trigger: CCTGAGTTCAGTTCCCAGCAACCTCATGGTGGTTCACAACCATCTATAATGGAATCCGATGCCCACTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR CCA 72 bp | CTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTaGCTAACGTTGCTGGAATCATCACTGCAGCCGCTG | + |
Preference number: 3 (lower is better) Translates to: LLQKAAVSKRPL*LTLLESSLQPL Trigger: CAGCGGCTGCAGTGATGATTCCAGCAACGTTAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR TCA 72 bp | GCATCGGATTCCATTATAGATGGTTGTGAACCACCATaGGGTTGCTGGGAACTGAACTCAGGACCTCTGGAA | + |
Preference number: 3 (lower is better) Translates to: ASDSIIDGCEPP*GCWELNSGPLE Trigger: TTCCAGAGGTCCTGAGTTCAGTTCCCAGCAACCTCATGGTGGTTCACAACCATCTATAATGGAATCCGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR-3UTR CAA 90 bp | CGGTACCTCGTCCTGAAGTTCATCGCCGCTTTTAGCAGAAGCAAGCATGTCATAAAAGATCTTCAACTCTaGCTGCTTCAGTCATTTCCT | + |
Preference number: 3 (lower is better) Translates to: RYLVLKFIAAFSRSKHVIKDLQL*LLQSFP Trigger: AGGAAATGACTGAAGCAGCAAGAGTTGAAGATCTTT...TATGACATGCTTGCTTCTGCTAAAAGCGGCGATGAACTTCAGGACGAGGTACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR TCA 72 bp | CTATCAGTGACAGCGAAGAAGGTGAACATCCCATGTTaGCTATTGTGTCTAAAACGTTATTCTGGGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: LSVTAKKVNIPC*LLCLKRYSGLS Trigger: GCTCAGCCCAGAATAACGTTTTAGACACAATAGTCAACATGGGATGTTCACCTTCTTCGCTGTCACTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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3UTR-3UTR CAA 90 bp | GACAGCGAAGAAGGTGAACATCCCATGTTGACTATTGTGTCTAAAACGTTATTCGGGATTCACCATTTATaGGTAATTCATCAAAGTGGT | + |
Preference number: 3 (lower is better) Translates to: DSEEGEHPMLTIVSKTLFGIHHL*VIHQSG Trigger: ACCACTTTGATGAATTACCAATAAATGGTGAATCCC...GAATAACGTTTTAGACACAATAGTCAACATGGGATGTTCACCTTCTTCGCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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CDS-3UTR TCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGCAGCATGGCTCGGCTaGGATGCGCTTGAAGCAAGA | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVAAWLG*DALEAR Trigger: TCTTGCTTCAAGCGCATCTCAGCCGAGCCATGCTGC...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR CAA 72 bp | AAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAACGTaGCTGGAATCATCACTGCAGCCGCTGTCAATTTCC | + |
Preference number: 4 (lower is better) Translates to: KAAVSKRPLWLT*LESSLQPLSIS Trigger: GGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACGTTAGCCACAGAGGCCTTTTAGAAACTGCTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCCATCTCTCCTCGGCTaGTGTAGGTTTGAAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVPSLLG*CRFEVG Trigger: TCCTACTTCAAACCTACATCAGCCGAGGAGAGATGG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCACCCCAGGCTAATGTaGCTGTACAGACTAGGACTT | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVHPRLM*LYRLGL Trigger: AAGTCCTAGTCTGTACAGCCACATTAGCCTGGGGTG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGTGGCTTCCATTTCCTaGAAAGGTGAAGGTGGTGCT | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFVASIS*KGEGGA Trigger: AGCACCACCTTCACCTTTTCAGGAAATGGAAGCCAC...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCTTCATGCAGCAAGTaGACCTCGTCAAGAATCAGG | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVSSCSK*TSSRIR Trigger: CCTGATTCTTGACGAGGTGCACTTGCTGCATGAAGA...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTCCTCAAACCCAACTaGCATTGGTTCACCATAGGG | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVFLKPN*HWFTIG Trigger: CCCTATGGTGAACCAATGCCAGTTGGGTTTGAGGAA...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAATCAGTATCATAATCTaGGCAGGGCAGCATGGCTCG | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFEISIII*AGQHGS Trigger: CGAGCCATGCTGCCCTGCCCAGATTATGATACTGAT...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAATGGAACTGGGCGAACTaGTGGTCGGAAGTTAAACAA | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFEWNWAN*WSEVKQ Trigger: TTGTTTAACTTCCGACCATCAGTTCGCCCAGTTCCA...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAATGCATCACTCAGAATTaGCAGCAGTTCCTCAGTGCT | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFECITQN*QQFLSA Trigger: AGCACTGAGGAACTGCTGTCAATTCTGAGTGATGCA...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGTTGCCTGGCATACTCTaGGAGCTTGGTCTAAGACTG | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKLPGIL*ELGLRL Trigger: CAGTCTTAGACCAAGCTCTCAGAGTATGCCAGGCAA...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCGAGGAGTAACTGCGTaGTTCTCATGTTTTCCCTTT | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVRGVTA*FSCFPF Trigger: AAAGGGAAAACATGAGAATCACGCAGTTACTCCTCG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGCCAAATTTGTCAAATTaGGGTCGTCCAGCTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKPNLSN*GRPARP Trigger: TGGCCGAGCTGGACGACCGCAATTTGACAAATTTGG...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAAGGAGCTGTTCTCGATaGTTCCTTAGTGTTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFERSCSR*FLSVGS Trigger: TGACCCAACACTAAGGAAGCATCGAGAACAGCTCCT...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCATACTAGCCATGCGTaGGCAGTAATGTTGTCCTGG | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVHTSHA*AVMLSW Trigger: CCAGGACAACATTACTGCCCACGCATGGCTAGTATG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCAAAACAGGCTTGGCTaGAGAGTGACTTCTAATTGC | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVQNRLG*RVTSNC Trigger: GCAATTAGAAGTCACTCTCCAGCCAAGCCTGTTTTG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGCAAGAGATGGGCTTTaGTGTGAGGGCTGTCAAATG | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVARDGL*CEGCQM Trigger: CATTTGACAGCCCTCACACCAAAGCCCATCTCTTGC...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAATCTGGTACGCTTTGTaGCTGATGCCGTATGCTAGC | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSIWYAL*LMPYAS Trigger: GCTAGCATACGGCATCAGTCACAAAGCGTACCAGAT...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGCATTTCCTGAAAAGGTaGAGGTGGTGCTGCTCTATG | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKHFLKR*RWCCSM Trigger: CATAGAGCAGCACCACCTTCACCTTTTCAGGAAATG...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAGGACTCTCTGTAGGCTaGCTTGAAGCACATACTCCT | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSGLSVG*LEAHTP Trigger: AGGAGTATGTGCTTCAAGTCAGCCTACAGAGAGTCC...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTATACTGACAAGTCAGTaGAGACATCAGAGTCCTTTG | + |
Preference number: 4 (lower is better) Translates to: LVHMTEQSRLSASGQMACILTSQ*RHQSPL Trigger: CAAAGGACTCTGATGTCTTCACTGACTTGTCAGTAT...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTATTCTTTCACAACAATaGCCAGTGGCTCTAGACGTT | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVILSQQ*PVALDV Trigger: AACGTCTAGAGCCACTGGGCATTGTTGTGAAAGAAT...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCCAACGTTTCCTCAGTaGAATTTCAAAGAGAGCACG | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFPTFPQ*NFKEST Trigger: CGTGCTCTCTTTGAAATTGCACTGAGGAAACGTTGG...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTAGTGTGTGGAATATCTaGGTCTGTACAGGGTTAAAG | + |
Preference number: 4 (lower is better) Translates to: LVHMTEQSRLSASGQMACSVWNI*VCTGLK Trigger: CTTTAACCCTGTACAGACGCAGATATTCCACACACT...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCAGTGGTTCAATGGTaGGATTATCCTCTCCAACTT | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVSVVQW*DYPLQL Trigger: AAGTTGGAGAGGATAATCGCACCATTGAACCACTGA...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCACTCTATCGTTACATaGGTTTTCTGCCATCTGGAC | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFHSIVT*VFCHLD Trigger: GTCCAGATGGCAGAAAACCCATGTAACGATAGAGTG...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGCAGTAATGTTGTCCTaGGAAACCCTGAATGTGAAC | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFEAVMLS*ETLNVN Trigger: GTTCACATTCAGGGTTTCCCAGGACAACATTACTGC...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTATTCAACCACTGCTTTaGGTCTTCTTCAGTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVIQPLL*VFFSGQ Trigger: CTGGCCACTGAAGAAGACCCAAAGCAGTGGTTGAAT...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTCGACCACATGTCAGTaGTTCAATGGTGCGATTATC | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFSTTCQ*FNGAII Trigger: GATAATCGCACCATTGAACCACTGACATGTGGTCGA...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTTTGGAAGCCCAAAATaGACTCTCTGTAGGCTGACT | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFFGSPK*TLCRLT Trigger: AGTCAGCCTACAGAGAGTCCATTTTGGGCTTCCAAA...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GACAGCGAAGAAGGTGAACATCCCATGTTGACTATTGTGTCTAAAACGTTATTCTTGCTTGGTGACATTTaGAAAGGAGCGCAAGGCTCC | + |
Preference number: 4 (lower is better) Translates to: DSEEGEHPMLTIVSKTLFLLGDI*KGAQGS Trigger: GGAGCCTTGCGCTCCTTTTCAAATGTCACCAAGCAA...GAATAACGTTTTAGACACAATAGTCAACATGGGATGTTCACCTTCTTCGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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CDS-3UTR TCA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTACATTACAGTCTGTGTaGTACAGTGTGTGGAATATC | + |
Preference number: 4 (lower is better) Translates to: LVHMTEQSRLSASGQMACTLQSV*YSVWNI Trigger: GATATTCCACACACTGTATCACACAGACTGTAATGT...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTTCTGCAGCACATCTGTaGTGGGAAAATCCACATAAC | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVSAAHL*WENPHN Trigger: GTTATGTGGATTTTCCCATCACAGATGTGCTGCAGA...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCTGCCCAATCAGATGTaGCAGGAACTTGTTTATGGA | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVLPNQM*QELVYG Trigger: TCCATAAACAAGTTCCTGTCACATCTGATTGGGCAG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTACAAATACCATCACCTaGTGTCCAGCCTTTACTTGT | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFTNTIT*CPAFTC Trigger: ACAAGTAAAGGCTGGACACCAGGTGATGGTATTTGT...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAACAAAGGAGCCTCTTTTaGCAGCGTATATTTGTGTTC | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFEQRSLF*QRIFVF Trigger: GAACACAAATATACGCTGCCAAAAGAGGCTCCTTTG...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTATTCTAGCTGCATTCTaGGCGACATATGCAGAATCT | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFILAAF*ATYAES Trigger: AGATTCTGCATATGTCGCCCAGAATGCAGCTAGAAT...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCCAACTTCAATGCAGTaGGAAAGCTCCAATTCAACC | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVPTSMQ*ESSNST Trigger: GGTTGAATTGGAGCTTTCCCACTGCATTGAAGTTGG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTACAGAGTCCGTCATGTaGAATGTCATAAAGAGAAAT | + |
Preference number: 4 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVTESVM*NVIKRN Trigger: ATTTCTCTTTATGACATTTCACATGACGGACTCTGT...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTATCTTGGCTCCAGCTATaGATGCTGATGTTTCTCGGG | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLSWLQL*MLMFLG Trigger: CCCGAGAAACATCAGCATTCATAGCTGGAGCCAAGA...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGGCTCTAGACGTTTGCTaGAGTAATTTGTCATCTCAG | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKALDVC*SNLSSQ Trigger: CTGAGATGACAAATTACTTCAGCAAACGTCTAGAGC...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGGCCAAATATCTGCATaGCATCTAAAATTCCAAGGT | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFEGQISA*HLKFQG Trigger: ACCTTGGAATTTTAGATGTCATGCAGATATTTGGCC...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAAGACTTTCCAGAAACTaGCTCTCAATTGGGTTTTGT | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFERLSRN*LSIGFC Trigger: ACAAAACCCAATTGAGAGTCAGTTTCTGGAAAGTCT...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGGGAGGACAGTCCGTGTaGTGGGCTGAATGGAAGCTT | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQGGQSV*WAEWKL Trigger: AAGCTTCCATTCAGCCCATCACACGGACTGTCCTCC...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCACACGTACTAGAGCTTTaGGGGGTGCAATATATACTG | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSHVLEL*GVQYIL Trigger: CAGTATATATTGCACCCCTCAAAGCTCTAGTACGTG...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGCGGCTGAGATGCGCTTaGAGCAAGAGATGGGCTTTG | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQRLRCA*SKRWAL Trigger: CAAAGCCCATCTCTTGCTTCAAGCGCATCTCAGCCG...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GAAGCAAGCATGTCATATAGAGTACAGCAAAGATCTTCAACTCTTGCTGCTTCAAGCCCCACTCTCAATTaGTTCTCTCCCATTATCCGT | + |
Preference number: 4 (lower is better) Translates to: EASMSYRVQQRSSTLAASSPTLN*FSPIIR Trigger: ACGGATAATGGGAGAGAAGCAATTGAGAGTGGGGCT...TGAAGCAGCAAGAGTTGAAGATCTTTGCTGTACTCTATATGACATGCTTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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CDS-3UTR GCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGTCCATATTCAACCACTaGTTTGGGTCTTCTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKSIFNH*FGSSSV Trigger: CACTGAAGAAGACCCAAAGCAGTGGTTGAATATGGA...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCTAGAATTACAGCTTTaGCCTGGTCATCAAACTGAG | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVLELQL*PGHQTE Trigger: CTCAGTTTGATGACCAGGGCAAAGCTGTAATTCTAG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTATTGTAATTCTGTTCTaGAGCAGCTTCTCAATCAGA | + |
Preference number: 4 (lower is better) Translates to: LVHMTEQSRLSASGQMACIVILF*SSFSIR Trigger: TCTGATTGAGAAGCTGCTCCAGAACAGAATTACAAT...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTTGCCAAGGCTTTCATTaGAGCGACATACACAATCTT | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVCQGFH*SDIHNL Trigger: AAGATTGTGTATGTCGCTCCAATGAAAGCCTTGGCA...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCACCTGCCGTAAGGTCCTaGCGACTATGCTTTCTAGCA | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISAPAVRS*RLCFLA Trigger: TGCTAGAAAGCATAGTCGCCAGGACCTTACGGCAGG...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGTTATCATACTCTGTGTaGATTCAACCTGCCGTAAGG | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKLSYSV*IQPAVR Trigger: CCTTACGGCAGGTTGAATCCACACAGAGTATGATAA...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTATCTCTGCATTTAAGTaGTCAGACAACACTCCTAAT | + |
Preference number: 4 (lower is better) Translates to: LVHMTEQSRLSASGQMACISAFK*SDNTPN Trigger: ATTAGGAGTGTTGTCTGACCACTTAAATGCAGAGAT...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCTTGCTTGGTGACATTTaGAAAGGAGCGCAAGGCTCC | + |
Preference number: 4 (lower is better) Translates to: WKEHSIYFISTSYSVHIFLLGDI*KGAQGS Trigger: GGAGCCTTGCGCTCCTTTTCAAATGTCACCAAGCAA...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTACAGACTAGGACTTTaGTATGCCCATTTGAAAACA | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFYRLGL*YAHLKT Trigger: TGTTTTCAAATGGGCATATCAAAGTCCTAGTCTGTA...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTACACACCTCCTGGAGCTaGGAGTTCACAGAAATTGTT | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLHTSWS*EFTEIV Trigger: AACAATTTCTGTGAACTCTCAGCTCCAGGAGGTGTG...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGGGGCTGTCAAATGAATaGGGATTTAATTCAATGGGA | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKGLSNE*GFNSMG Trigger: TCCCATTGAATTAAATCCTCATTCATTTGACAGCCC...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAATTAAACAAACCCATCTaGTTAATGTTGAGCCAGTCA | + |
Preference number: 4 (lower is better) Translates to: AGIITAAAVNFLVGLRFELNKPI*LMLSQS Trigger: TGACTGGCTCAACATTAAGCAGATGGGTTTGTTTAA...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTAAGAAATTCCATGCCTaGTTTGTTTTTGCAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: GIITAAAVNFLVGLRFEVKKFHA*FVFAGC Trigger: ACAGCCTGCAAAAACAAAGCAGGCATGGAATTTCTT...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTGGCTGAGTTTATCGTaGGTTGTTATAATGATTCCT | + |
Preference number: 4 (lower is better) Translates to: VAGIITAAAVNFLVGLRFWLSLS*VVIMIP Trigger: AGGAATCATTATAACAACCCACGATAAACTCAGCCA...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCACTCATGTTTTCCCTTTaGAAGCCCAAAATGGACTCT | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSLMFSL*KPKMDS Trigger: AGAGTCCATTTTGGGCTTCCAAAGGGAAAACATGAG...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTTTTCTCCACAGGCTTaGGCTCAGGAGTGTAGGGTT | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQFSPQA*AQECRV Trigger: AACCCTACACTCCTGAGCTCAAGCCTGTGGAGAAAA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCAAGCCCCACTCTCAATTaGTTCTCTCCCATTATCCGT | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISASPTLN*FSPIIR Trigger: ACGGATAATGGGAGAGAAGCAATTGAGAGTGGGGCT...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAGCTCGGCCAAATATCTaGATGACATCTAAAATTCCA | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSARPNI*MTSKIP Trigger: TGGAATTTTAGATGTCATGCAGATATTTGGCCGAGC...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAAGCAGTTCCTCAGTGCTaGACTCAGGTTTCAAACGGT | + |
Preference number: 4 (lower is better) Translates to: EQDALYTGSKSPKSKLNKAVPQC*TQVSNG Trigger: ACCGTTTGAAACCTGAGTGCAGCACTGAGGAACTGC...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGTTGGTATTCTCTCTCTaGATTCCTTCTGGTAAAATC | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKLVFSL*IPSGKI Trigger: GATTTTACCAGAAGGAATCCAGAGAGAGAATACCAA...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAATGCAGAATCTGATATaGGGGAGAAACTGTCCATCT | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLMQNLI*GRNCPS Trigger: AGATGGACAGTTTCTCCCTCATATCAGATTCTGCAT...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCATCATGCAGGCCAGCATaGTGCATTCCTATTCCAAAA | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISASCRPA*CIPIPK Trigger: TTTTGGAATAGGAATGCATCATGCTGGCCTGCATGA...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTCTGAATCAGGTGGGTaGTATTCAGGACGGTCACTA | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQSESGG*YSGRSL Trigger: TAGTGACCGTCCTGAATATCACCCACCTGATTCAGA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGTCACTTTTTGACAACTaGATATCTCCAGTCAATTCT | + |
Preference number: 4 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKSLFDN*ISPVNS Trigger: AGAATTGACTGGAGATATGCAGTTGTCAAAAAGTGA...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGACAGCAGTTCCTCAGTaGTGCACTCAGGTTTCAAAC | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQTAVPQ*CTQVSN Trigger: GTTTGAAACCTGAGTGCAGCACTGAGGAACTGCTGT...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCATGTACAGGGTTAAAGTaGCTGAAGTTATATAGAGCT | + |
Preference number: 4 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSCTGLK*LKLYRA Trigger: AGCTCTATATAACTTCAGCCACTTTAACCCTGTACA...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCATCCTCCCCTAGCAGATaGATCTCATCTATGATGAGA | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISASSPSR*ISSMMR Trigger: TCTCATCATAGATGAGATCCATCTGCTAGGGGAGGA...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCACATTGCATCTTGCTTTaGTGTTATTGTACCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISAHCILL*CYCTSS Trigger: GCTGGAGGTACAATAACATCAAAGCAAGATGCAATG...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCAGATCAGCATGCAACTTaGTCCATTTGTTTTCATCCC | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISADQHAT*SICFHP Trigger: GGGATGAAAACAAATGGATCAAGTTGCATGCTGATC...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCGTTACATGGGTTTTCTaGCATCTGGACAAAAGCAGT | + |
Preference number: 4 (lower is better) Translates to: WKEHSIYFISTSYSVHIFVTWVF*HLDKSS Trigger: ACTGCTTTTGTCCAGATGGCAGAAAACCCATGTAAC...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCTCCTTACAGTGGCATTaGGAGCATGTACAAATACCA | + |
Preference number: 4 (lower is better) Translates to: WKEHSIYFISTSYSVHIFSLQWH*EHVQIP Trigger: TGGTATTTGTACATGCTCGCAATGCCACTGTAAGGA...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGCAACATCGAGGTAGTTaGGTAAGGTTGCAGACAATC | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQQHRGS*VRLQTI Trigger: GATTGTCTGCAACCTTACCCAACTACCTCGATGTTG...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGCAAGAGAAATCAGGGTaGATGTTCAGTGATACTCGG | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQQEKSG*MFSDTR Trigger: CCGAGTATCACTGAACATCCACCCTGATTTCTCTTG...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCTCCAATAATTCTGTATaGGGAGGATGTCTCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: WKEHSIYFISTSYSVHIFSNNSV*GGCLSG Trigger: ACCAGAGAGACATCCTCCCCATACAGAATTATTGGA...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTCCATCCCACTTTTCTaGTGTGGTGACAATAAGGTC | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQSIPLF*CGDNKV Trigger: GACCTTATTGTCACCACACCAGAAAAGTGGGATGGA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAGTGCTGCTCTATGTTTaGTATTGTGAGAAGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLVLLYV*YCEKRR Trigger: TCTTCTCTTCTCACAATACCAAACATAGAGCAGCAC...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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3UTR CAA 72 bp | GCATGTCATATAGAGTACAGCAAAGATCTTCAACTCTaGCTGCTTCAGTCATTTCCTTTAACGTTGCGTTTA | + |
Preference number: 4 (lower is better) Translates to: ACHIEYSKDLQL*LLQSFPLTLRL Trigger: TAAACGCAACGTTAAAGGAAATGACTGAAGCAGCAAGAGTTGAAGATCTTTGCTGTACTCTATATGACATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219226.2 |
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CDS-3UTR TCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAAGACATATGCAGAATCTaGTATGAGGGAGAAACTGTC | + |
Preference number: 4 (lower is better) Translates to: EQDALYTGSKSPKSKLNKDICRI*YEGETV Trigger: GACAGTTTCTCCCTCATATCAGATTCTGCATATGTC...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAATTGTTCGAGATACAATaGCTTCTAAAACTGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: EQDALYTGSKSPKSKLNKLFEIQ*LLKLGL Trigger: GAGGCCCAGTTTTAGAAGTCATTGTATCTCGAACAA...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGGCTGTAAGTCGTGTTTaGCGTCTTGATGAGACAAAT | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQAVSRV*RLDETN Trigger: ATTTGTCTCATCAAGACGTCAAACACGACTTACAGC...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR TCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCAGTAGCAATGAGAACCTaGACTTTACAGTTCACAAAC | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISAVAMRT*TLQFTN Trigger: GTTTGTGAACTGTAAAGTTCAGGTTCTCATTGCTAC...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTCTAGCATTCAGAAGTaGATGTTCTCTCTGTATCCG | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQSSIQK*MFSLYP Trigger: CGGATACAGAGAGAACATGCACTTCTGAATGCTAGA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAACTTCCTCATACAGCTTaGTATTCTCTCTCTGGATTC | + |
Preference number: 4 (lower is better) Translates to: EQDALYTGSKSPKSKLNKLPHTA*YSLSGF Trigger: GAATCCAGAGAGAGAATACCAAGCTGTATGAGGAAG...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCATCAGCATGTTTTCGTTaGTGTTGTAGGCTGTTTCAA | + |
Preference number: 4 (lower is better) Translates to: HIFQDQCVVFEKSSLISASACFR*CCRLFQ Trigger: TTGAAACAGCCTACAACACCAACGAAAACATGCTGA...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAAAACTGACTCTCAATTaGGTTTTGTTGAGTGAGCAA | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLKLTLN*VLLSEQ Trigger: TTGCTCACTCAACAAAACCCAATTGAGAGTCAGTTT...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAATTGGGTCTTCTTCAGTaGCCAGAAATGCTATCAACT | + |
Preference number: 4 (lower is better) Translates to: EQDALYTGSKSPKSKLNKLGLLQ*PEMLST Trigger: AGTTGATAGCATTTCTGGCCACTGAAGAAGACCCAA...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR GCA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAACCCTCTGTTTTGTGTaGATCAAAGAGTTCATTAAA | + |
Preference number: 4 (lower is better) Translates to: KLINLLQKAAVSKRPLWLTLCFV*IKEFIK Trigger: TTTAATGAACTCTTTGATGCACACAAAACAGAGGGT...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CCA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGGAGGATTTAATTCAATaGGAAGACATTTGGCCAATT | + |
Preference number: 4 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQEDLIQ*EDIWPI Trigger: AATTGGCCAAATGTCTTCCCATTGAATTAAATCCTC...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | GTGAGAAGAGAAGAGTCCTTGAGCCATCGGCCTTGGATCACCATCTaGATCAGGTGGGTGATATTCAGGACGGTCACTAGCCATCCCTGG | + |
Preference number: 5 (lower is better) Translates to: VRREESLSHRPWITI*IRWVIFRTVTSHPW Trigger: CCAGGGATGGCTAGTGACCGTCCTGAATATCACCCACCTGATTCAGATGGTGATCCAAGGCCGATGGCTCAAGGACTCTTCTCTTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | TGCTCGCATGCGCACATAGAGGTAAGTGTAACTCATCCACCTCACTaGCTCTTCCACGTTGGTGACTGTCCCCAGCGCAATCTCTGCATT | + |
Preference number: 5 (lower is better) Translates to: CSHAHIEVSVTHPPH*LFHVGDCPQRNLCI Trigger: AATGCAGAGATTGCGCTGGGGACAGTCACCAACGTGGAAGAGGCAGTGAGGTGGATGAGTTACACTTACCTCTATGTGCGCATGCGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | CTCGATGCTTCCTTAGTGTTGGGTCAATCTGGTACGCTTTGTGACTaGTGCCGTATGCTAGCGGGTTTGCTCGCATGCGCACATAGAGGT | + |
Preference number: 5 (lower is better) Translates to: LDASLVLGQSGTLCD*CRMLAGLLACAHRG Trigger: ACCTCTATGTGCGCATGCGAGCAAACCCGCTAGCATACGGCATCAGTCACAAAGCGTACCAGATTGACCCAACACTAAGGAAGCATCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | TTTTGGTATCAGTATCATAATCTGGGCAGGGCAGCATGGCTCGGCTaGGATGCGCTTGAAGCAAGAGATGGGCTTTGGTGTGAGGGCTGT | + |
Preference number: 5 (lower is better) Translates to: FWYQYHNLGRAAWLG*DALEARDGLWCEGC Trigger: ACAGCCCTCACACCAAAGCCCATCTCTTGCTTCAAGCGCATCTCAGCCGAGCCATGCTGCCCTGCCCAGATTATGATACTGATACCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | TCATACTCTGTGTGGATTCAACCTGCCGTAAGGTCCTGGCGACTATaGTTTCTAGCACTGGGCCTCTGTCTTCATGCAGCAAGTGCACCT | + |
Preference number: 5 (lower is better) Translates to: SYSVWIQPAVRSWRL*FLALGLCLHAASAP Trigger: AGGTGCACTTGCTGCATGAAGACAGAGGCCCAGTGCTAGAAAGCATAGTCGCCAGGACCTTACGGCAGGTTGAATCCACACAGAGTATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TTCTCTACCATGGAGCTGAACACATGGTCCTTCCCTTCACAGGCATaGATCAGCTCAGGAAGGCACTCAATGGATGTTCGGCACTTAGCA | + |
Preference number: 5 (lower is better) Translates to: FSTMELNTWSFPSQA*ISSGRHSMDVRHLA Trigger: TGCTAAGTGCCGAACATCCATTGAGTGCCTTCCTGAGCTGATCCATGCCTGTGAAGGGAAGGACCATGTGTTCAGCTCCATGGTAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | AGAGGTAAGTGTAACTCATCCACCTCACTGCCTCTTCCACGTTGGTaGCTGTCCCCAGCGCAATCTCTGCATTTAGGTTATCTGCAAGAC | + |
Preference number: 5 (lower is better) Translates to: RGKCNSSTSLPLPRW*LSPAQSLHLGYLQD Trigger: GTCTTGCAGATAACCTAAATGCAGAGATTGCGCTGGGGACAGTCACCAACGTGGAAGAGGCAGTGAGGTGGATGAGTTACACTTACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | TCCATGAACCTGGTCATTCCAAGAGAAATCAGGGTGGATGTTCAGTaGTACTCGGAGGACAGTCCGTGTGATGGGCTGAATGGAAGCTTC | + |
Preference number: 5 (lower is better) Translates to: SMNLVIPREIRVDVQ*YSEDSPCDGLNGSF Trigger: GAAGCTTCCATTCAGCCCATCACACGGACTGTCCTCCGAGTATCACTGAACATCCACCCTGATTTCTCTTGGAATGACCAGGTTCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | TTTCCTGATCCGGTGGGGGCGCCAAGCAGAACATTACAGTCTGTGTaGTACAGTGTGTGGAATATCTGCGTCTGTACAGGGTTAAAGTGG | + |
Preference number: 5 (lower is better) Translates to: FPDPVGAPSRTLQSV*YSVWNICVCTGLKW Trigger: CCACTTTAACCCTGTACAGACGCAGATATTCCACACACTGTATCACACAGACTGTAATGTTCTGCTTGGCGCCCCCACCGGATCAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | AAGGTCCTGGCGACTATGCTTTCTAGCACTGGGCCTCTGTCTTCATaGAGCAAGTGCACCTCGTCAAGAATCAGGAGTTTTACGATTTGG | + |
Preference number: 5 (lower is better) Translates to: KVLATMLSSTGPLSS*SKCTSSRIRSFTIW Trigger: CCAAATCGTAAAACTCCTGATTCTTGACGAGGTGCACTTGCTGCATGAAGACAGAGGCCCAGTGCTAGAAAGCATAGTCGCCAGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | GTTTTTGCAGGCTGTAACTCTTTCTCTACCATGGAGCTGAACACATaGTCCTTCCCTTCACAGGCATGGATCAGCTCAGGAAGGCACTCA | + |
Preference number: 5 (lower is better) Translates to: VFAGCNSFSTMELNT*SFPSQAWISSGRHS Trigger: TGAGTGCCTTCCTGAGCTGATCCATGCCTGTGAAGGGAAGGACCATGTGTTCAGCTCCATGGTAGAGAAAGAGTTACAGCCTGCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCGGCTGAGATGCGCTaGAAGCAAGAGATGGGCTTT | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVSAEMR*KQEMGF Trigger: AAAGCCCATCTCTTGCTTCAAGCGCATCTCAGCCGA...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCTTGAGCCATCGGCCTaGGATCACCATCTGAATCAG | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVLEPSA*DHHLNQ Trigger: CTGATTCAGATGGTGATCCAAGGCCGATGGCTCAAG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTGATTCTGTCAAGCCCAAATTTGTCAAATaGCGGTCGTCCAGCTCGGCC | + |
Preference number: 5 (lower is better) Translates to: AAAVNFLVGLRFEVDSVKPKFVK*RSSSSA Trigger: GGCCGAGCTGGACGACCGCAATTTGACAAATTTGGG...CTTGACAGAATCAACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTCTGCATCACTCAGAATaGACAGCAGTTCCTCAGTGC | + |
Preference number: 5 (lower is better) Translates to: LVHMTEQSRLSASGQMACLHHSE*TAVPQC Trigger: GCACTGAGGAACTGCTGTCAATTCTGAGTGATGCAG...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | GTAGGATCTTCTACCCAAATCCACCATGGTTCCCCCACTGTTCCATaGACCTGGTCATTCCAAGAGAAATCAGGGTGGATGTTCAGTGAT | + |
Preference number: 5 (lower is better) Translates to: VGSSTQIHHGSPTVP*TWSFQEKSGWMFSD Trigger: ATCACTGAACATCCACCCTGATTTCTCTTGGAATGACCAGGTTCATGGAACAGTGGGGGAACCATGGTGGATTTGGGTAGAAGATCCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | TCCTGGGAAACCCTGAATGTGAACTTCCAGTGGAACTGGGCGAACTaGTGGTCGGAAGTTAAACAAACCCATCTGCTTAATGTTGAGCCA | + |
Preference number: 5 (lower is better) Translates to: SWETLNVNFQWNWAN*WSEVKQTHLLNVEP Trigger: TGGCTCAACATTAAGCAGATGGGTTTGTTTAACTTCCGACCATCAGTTCGCCCAGTTCCACTGGAAGTTCACATTCAGGGTTTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | GTCAGTGGTTCAATGGTGCGATTATCCTCTCCAACTTCAATGCAGTaGGAAAGCTCCAATTCAACCAGAGACTGCCCAATCAGATGTGAC | + |
Preference number: 5 (lower is better) Translates to: VSGSMVRLSSPTSMQ*ESSNSTRDCPIRCD Trigger: GTCACATCTGATTGGGCAGTCTCTGGTTGAATTGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TGGCTTCCATTTCCTGAAAAGGTGAAGGTGGTGCTGCTCTATGTTTaGTATTGTGAGAAGAGAAGAGTCCTTGAGCCATCGGCCTTGGAT | + |
Preference number: 5 (lower is better) Translates to: WLPFPEKVKVVLLYV*YCEKRRVLEPSALD Trigger: ATCCAAGGCCGATGGCTCAAGGACTCTTCTCTTCTCACAATACCAAACATAGAGCAGCACCACCTTCACCTTTTCAGGAAATGGAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTAACTGCCTCTTCCACGTaGGTGACTGTCCCCAGCGCA | + |
Preference number: 5 (lower is better) Translates to: KLINLLQKAAVSKRPLWLTASST*VTVPSA Trigger: TGCGCTGGGGACAGTCACCAACGTGGAAGAGGCAGT...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | CACATGTCAGTGGTTCAATGGTGCGATTATCCTCTCCAACTTCAATaGAGTGGGAAAGCTCCAATTCAACCAGAGACTGCCCAATCAGAT | + |
Preference number: 5 (lower is better) Translates to: HMSVVQWCDYPLQLQ*SGKAPIQPETAQSD Trigger: ATCTGATTGGGCAGTCTCTGGTTGAATTGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGACATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | ACTTCTAATTGCCTGAAATGCAGGCTTGTTCATACTAGCCATGCGTaGGCAGTAATGTTGTCCTGGGAAACCCTGAATGTGAACTTCCAG | + |
Preference number: 5 (lower is better) Translates to: TSNCLKCRLVHTSHA*AVMLSWETLNVNFQ Trigger: CTGGAAGTTCACATTCAGGGTTTCCCAGGACAACATTACTGCCCACGCATGGCTAGTATGAACAAGCCTGCATTTCAGGCAATTAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTAACCAAATTTCTGTCTaGCCGAAGCATCCCGGCATG | + |
Preference number: 5 (lower is better) Translates to: GIITAAAVNFLVGLRFEVNQISV*PKHPGM Trigger: CATGCCGGGATGCTTCGGCAAGACAGAAATTTGGTT...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAAGAGTCAGCTTGAGGTaGGAATCTCGTACTGTTCCA | + |
Preference number: 5 (lower is better) Translates to: AGIITAAAVNFLVGLRFERVSLR*ESRTVP Trigger: TGGAACAGTACGAGATTCCAACCTCAAGCTGACTCT...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCTCATGTTTTCCCTTaGGAAGCCCAAAATGGACTC | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVSHVFP*EAQNGL Trigger: GAGTCCATTTTGGGCTTCCAAAGGGAAAACATGAGA...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TCGCTCGAGGAATTAAGGAACCGATCTACAATTGTAATTCTGTTCTaGAGCAGCTTCTCAATCAGATCCAGTCCTTCAGGTCCCAGCAAT | + |
Preference number: 5 (lower is better) Translates to: SLEELRNRSTIVILF*SSFSIRSSPSGPSN Trigger: ATTGCTGGGACCTGAAGGACTGGATCTGATTGAGAAGCTGCTCCAGAACAGAATTACAATTGTAGATCGGTTCCTTAATTCCTCGAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035606.10 ENSMUST00000220355.2 |
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CDS-3UTR CAA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCTGCCAAGGCTTTCATaGGAGCGACATACACAATCT | + |
Preference number: 5 (lower is better) Translates to: GIITAAAVNFLVGLRFEVLPRLS*ERHTQS Trigger: AGATTGTGTATGTCGCTCCAATGAAAGCCTTGGCAG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CTTGTTCACATGACTGAACAGTCAAGACTCTCAGCCTCTGGTCAAATGGCCTGTCAACCCCAGAGTCTCTaGTCAATGACTTTACTAAGA | + |
Preference number: 5 (lower is better) Translates to: LVHMTEQSRLSASGQMACQPQSL*SMTLLR Trigger: TCTTAGTAAAGTCATTGACAAGAGACTCTGGGGTTG...ACAGGCCATTTGACCAGAGGCTGAGAGTCTTGACTGTTCAGTCATGTGAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTAGAGCTTCATATGCTTaGCACCCCAAAGCTGTAATT | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVRASYA*HPKAVI Trigger: AATTACAGCTTTGGGGTGCAAAGCATATGAAGCTCT...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | CAAATTTGTCAAATTGCGGTCGTCCAGCTCGGCCAAATATCTGCATaGCATCTAAAATTCCAAGGTCAACAAAGGAGCCTCTTTTGGCAG | + |
Preference number: 5 (lower is better) Translates to: QICQIAVVQLGQISA*HLKFQGQQRSLFWQ Trigger: CTGCCAAAAGAGGCTCCTTTGTTGACCTTGGAATTTTAGATGTCATGCAGATATTTGGCCGAGCTGGACGACCGCAATTTGACAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | AACAGCTCTTCTACAGTTTTTCGGTCTCTTTCATGCAGGCCAGCATaGTGCATTCCTATTCCAAAAGCTAGAGTCAGCTTGAGGTTGGAA | + |
Preference number: 5 (lower is better) Translates to: NSSSTVFRSLSCRPA*CIPIPKARVSLRLE Trigger: TTCCAACCTCAAGCTGACTCTAGCTTTTGGAATAGGAATGCATCATGCTGGCCTGCATGAAAGAGACCGAAAAACTGTAGAAGAGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | CATGTAACCAACAGAGTCCGTCATGTGAAATGTCATAAAGAGAAATaGAGCCCCACTCTCAATTGCTTCTCTCCCATTATCCGTTCCAAC | + |
Preference number: 5 (lower is better) Translates to: HVTNRVRHVKCHKEK*SPTLNCFSPIIRSN Trigger: GTTGGAACGGATAATGGGAGAGAAGCAATTGAGAGTGGGGCTGCATTTCTCTTTATGACATTTCACATGACGGACTCTGTTGGTTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035606.10 ENSMUST00000220355.2 |
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CDS CCA 90 bp | TCATGCAGCAAGTGCACCTCGTCAAGAATCAGGAGTTTTACGATTTaGGAAAGAGCAACATCCCCAACACTCTTTCTTGTTACTACATCC | + |
Preference number: 5 (lower is better) Translates to: SCSKCTSSRIRSFTI*ERATSPTLFLVTTS Trigger: GGATGTAGTAACAAGAAAGAGTGTTGGGGATGTTGCTCTTTCCCAAATCGTAAAACTCCTGATTCTTGACGAGGTGCACTTGCTGCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | ATAGCTTCTATTCTGCCAGCTTCGACTAACTCCATCCCACTTTTCTaGTGTGGTGACAATAAGGTCAGCCTTAGCAATGGATTTCATGTC | + |
Preference number: 5 (lower is better) Translates to: IASILPASTNSIPLF*CGDNKVSLSNGFHV Trigger: GACATGAAATCCATTGCTAAGGCTGACCTTATTGTCACCACACCAGAAAAGTGGGATGGAGTTAGTCGAAGCTGGCAGAATAGAAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TCAAATAGTAATAGGAGGCAATTCGACCACATGTCAGTGGTTCAATaGTGCGATTATCCTCTCCAACTTCAATGCAGTGGGAAAGCTCCA | + |
Preference number: 5 (lower is better) Translates to: SNSNRRQFDHMSVVQ*CDYPLQLQCSGKAP Trigger: TGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGACATGTGGTCGAATTGCCTCCTATTACTATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTAAAGATCTTCAACTCTaGCTGCTTCAGTCATTTCCT | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVKDLQL*LLQSFP Trigger: AGGAAATGACTGAAGCAGCAAGAGTTGAAGATCTTT...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CGTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTCCCCAACACTCTTTCTaGTTACTACATCCCATTTTT | + |
Preference number: 5 (lower is better) Translates to: RCWNHHCSRCQFPSWFEVPQHSF*LLHPIF Trigger: AAAAATGGGATGTAGTAACAAGAAAGAGTGTTGGGG...AACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGTGTCCAGCCTTTACTaGTTTCAGAACACTTTCGTA | + |
Preference number: 5 (lower is better) Translates to: VAGIITAAAVNFLVGLRFVSSLY*FQNTFV Trigger: TACGAAAGTGTTCTGAAACAAGTAAAGGCTGGACAC...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAGTCCTTACAGTGGCATaGCGAGCATGTACAAATACC | + |
Preference number: 5 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSVLTVA*RACTNT Trigger: GGTATTTGTACATGCTCGCAATGCCACTGTAAGGAC...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTTCACGTACTAGAGCTTaGAGGGGTGCAATATATACT | + |
Preference number: 5 (lower is better) Translates to: VAGIITAAAVNFLVGLRFSRTRA*RGAIYT Trigger: AGTATATATTGCACCCCTCAAAGCTCTAGTACGTGA...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTAAAGCTAGAGTCAGCTaGAGGTTGGAATCTCGTACT | + |
Preference number: 5 (lower is better) Translates to: GIITAAAVNFLVGLRFEVKARVS*RLESRT Trigger: AGTACGAGATTCCAACCTCAAGCTGACTCTAGCTTT...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTCCATTGCATCTTGCTTaGATGTTATTGTACCTCCAG | + |
Preference number: 5 (lower is better) Translates to: VAGIITAAAVNFLVGLRFPLHLA*MLLYLQ Trigger: CTGGAGGTACAATAACATCAAAGCAAGATGCAATGG...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | CGTCATGTGAAATGTCATAAAGAGAAATGCAGCCCCACTCTCAATTaGTTCTCTCCCATTATCCGTTCCAACGATTTGTTTTGCAGCTTG | + |
Preference number: 5 (lower is better) Translates to: RHVKCHKEKCSPTLN*FSPIIRSNDLFCSL Trigger: CAAGCTGCAAAACAAATCGTTGGAACGGATAATGGGAGAGAAGCAATTGAGAGTGGGGCTGCATTTCTCTTTATGACATTTCACATGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035606.10 ENSMUST00000220355.2 |
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CDS GCA 90 bp | GTTCCAATGATGTTGTCCATCTCTTGCTCATCCATATTCAACCACTaGTTTGGGTCTTCTTCAGTGGCCAGAAATGCTATCAACTCTAAG | + |
Preference number: 5 (lower is better) Translates to: VPMMLSISCSSIFNH*FGSSSVARNAINSK Trigger: CTTAGAGTTGATAGCATTTCTGGCCACTGAAGAAGACCCAAAGCAGTGGTTGAATATGGATGAGCAAGAGATGGACAACATCATTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | AATAGTAATAGGAGGCAATTCGACCACATGTCAGTGGTTCAATGGTaGGATTATCCTCTCCAACTTCAATGCAGTGGGAAAGCTCCAATT | + |
Preference number: 5 (lower is better) Translates to: NSNRRQFDHMSVVQW*DYPLQLQCSGKAPI Trigger: AATTGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGACATGTGGTCGAATTGCCTCCTATTACTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TTTGTGCTTCAAATAGTAATAGGAGGCAATTCGACCACATGTCAGTaGTTCAATGGTGCGATTATCCTCTCCAACTTCAATGCAGTGGGA | + |
Preference number: 5 (lower is better) Translates to: FVLQIVIGGNSTTCQ*FNGAIILSNFNAVG Trigger: TCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGACATGTGGTCGAATTGCCTCCTATTACTATTTGAAGCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTACTTCCTCATACAGCTaGGTATTCTCTCTCTGGATT | + |
Preference number: 5 (lower is better) Translates to: GIITAAAVNFLVGLRFEVTSSYS*VFSLWI Trigger: AATCCAGAGAGAGAATACCAAGCTGTATGAGGAAGT...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAATATCACCCTCTGTTTaGTGTGCATCAAAGAGTTCA | + |
Preference number: 5 (lower is better) Translates to: AGIITAAAVNFLVGLRFEISPSV*CASKSS Trigger: TGAACTCTTTGATGCACACAAAACAGAGGGTGATAT...TTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCAGCGTGGGCAGTAATGTaGTCCTGGGAAACCCTGAAT | + |
Preference number: 5 (lower is better) Translates to: HIFQDQCVVFEKSSLISAAWAVM*SWETLN Trigger: ATTCAGGGTTTCCCAGGACAACATTACTGCCCACGC...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGGTTTCAAACGGTCCTaGAACATTTTGACAGTTTTG | + |
Preference number: 5 (lower is better) Translates to: VAGIITAAAVNFLVGLRFGFKRS*NILTVL Trigger: CAAAACTGTCAAAATGTTCAAGGACCGTTTGAAACC...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GTTGCTGGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGGGATTCACCATTTATaGGTAATTCATCAAAGTGGT | + |
Preference number: 5 (lower is better) Translates to: VAGIITAAAVNFLVGLRFGIHHL*VIHQSG Trigger: ACCACTTTGATGAATTACCAATAAATGGTGAATCCC...AAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCCAGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAACAAAGGAGCCTCTTTaGGCAGCGTATATTTGTGTT | + |
Preference number: 5 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSTKEPL*AAYICV Trigger: AACACAAATATACGCTGCCAAAAGAGGCTCCTTTGT...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGAATCATCACTGCAGCCGCTGTCAATTTCCTAGTTGGTTTGAGGTTTGAAGTTCGGTCCTTGAACATTTaGACAGTTTTGTGCTTCAAA | + |
Preference number: 5 (lower is better) Translates to: GIITAAAVNFLVGLRFEVRSLNI*TVLCFK Trigger: TTTGAAGCACAAAACTGTCAAAATGTTCAAGGACCG...AACTTCAAACCTCAAACCAACTAGGAAATTGACAGCGGCTGCAGTGATGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGAGAAGAGAAGAGTCCTaGAGCCATCGGCCTTGGATC | + |
Preference number: 5 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQRREES*SHRPWI Trigger: GATCCAAGGCCGATGGCTCAAGGACTCTTCTCTTCT...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 90 bp | AATAATTCTGTATGGGGAGGATGTCTCTCTGGTAGAATCAGATGTTaGAAGTTGATAATGCAAACAGCTTCAGCTCCTAGCCATCGATCA | + |
Preference number: 5 (lower is better) Translates to: NNSVWGGCLSGRIRC*KLIMQTASAPSHRS Trigger: TGATCGATGGCTAGGAGCTGAAGCTGTTTGCATTATCAACTTTCAACATCTGATTCTACCAGAGAGACATCCTCCCCATACAGAATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | GGGCTTTGGTGTGAGGGCTGTCAAATGAATGAGGATTTAATTCAATaGGAAGACATTTGGCCAATTCATTATTCGTATGGTCCTCATTGT | + |
Preference number: 5 (lower is better) Translates to: GLWCEGCQMNEDLIQ*EDIWPIHYSYGPHC Trigger: ACAATGAGGACCATACGAATAATGAATTGGCCAAATGTCTTCCCATTGAATTAAATCCTCATTCATTTGACAGCCCTCACACCAAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCTATTCAACCACTGCTTaGGGTCTTCTTCAGTGGCCA | + |
Preference number: 5 (lower is better) Translates to: WKEHSIYFISTSYSVHIFYSTTA*GLLQWP Trigger: TGGCCACTGAAGAAGACCCAAAGCAGTGGTTGAATA...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCAACACTCCTAATAAGCTaGATTCTACTGGGAAAGGTT | + |
Preference number: 5 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSTLLIS*ILLGKV Trigger: AACCTTTCCCAGTAGAATCAAGCTTATTAGGAGTGT...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 90 bp | TTATCGTGGGTTGTTATAATGATTCCTTCCCCAAATTTGTCAAATTaGGGTCGTCCAGCTCGGCCAAATATCTGCATGACATCTAAAATT | + |
Preference number: 5 (lower is better) Translates to: LSWVVIMIPSPNLSN*GRPARPNICMTSKI Trigger: AATTTTAGATGTCATGCAGATATTTGGCCGAGCTGGACGACCGCAATTTGACAAATTTGGGGAAGGAATCATTATAACAACCCACGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | TCTTGCTTTGATGTTATTGTACCTCCAGCAATCTCTGCATTTAAGTaGTCAGACAACACTCCTAATAAGCTTGATTCTACTGGGAAAGGT | + |
Preference number: 5 (lower is better) Translates to: SCFDVIVPPAISAFK*SDNTPNKLDSTGKG Trigger: ACCTTTCCCAGTAGAATCAAGCTTATTAGGAGTGTTGTCTGACCACTTAAATGCAGAGATTGCTGGAGGTACAATAACATCAAAGCAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GGTAGACACCAAGTAATTCGACTTGTTCACATGACTGAACAGTCAAGACTCTCACTTTTTAATAACACCTaGATGAAAGTGTTGGCGGAT | + |
Preference number: 5 (lower is better) Translates to: GRHQVIRLVHMTEQSRLSLFNNT*MKVLAD Trigger: ATCCGCCAACACTTTCATCAAGGTGTTATTAAAAAG...TGAGAGTCTTGACTGTTCAGTCATGTGAACAAGTCGAATTACTTGGTGTCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGCAGGAGTTTTACGATTaGGGAAAGAGCAACATCCCC | + |
Preference number: 5 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQQEFYD*GKSNIP Trigger: GGGGATGTTGCTCTTTCCCAAATCGTAAAACTCCTG...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | AAACTCATAAATCTGTTACAAAAGGCAGCAGTTTCTAAAAGGCCTCTGTGGCTACTTGCTTTGATGTTATaGTACCTCCAGCAATCTCTG | + |
Preference number: 5 (lower is better) Translates to: KLINLLQKAAVSKRPLWLLALML*YLQQSL Trigger: CAGAGATTGCTGGAGGTACAATAACATCAAAGCAAG...TAGCCACAGAGGCCTTTTAGAAACTGCTGCCTTTTGTAACAGATTTATGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCATTGTTTTCATCCCGTTaGTCTGCTGTCAGAGTTGAG | + |
Preference number: 5 (lower is better) Translates to: HIFQDQCVVFEKSSLISALFSSR*SAVRVE Trigger: CTCAACTCTGACAGCAGACAAACGGGATGAAAACAA...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 90 bp | GAGGGCTGTCAAATGAATGAGGATTTAATTCAATGGGAAGACATTTaGCCAATTCATTATTCGTATGGTCCTCATTGTGTCTTACTGGTA | + |
Preference number: 5 (lower is better) Translates to: EGCQMNEDLIQWEDI*PIHYSYGPHCVLLV Trigger: TACCAGTAAGACACAATGAGGACCATACGAATAATGAATTGGCCAAATGTCTTCCCATTGAATTAAATCCTCATTCATTTGACAGCCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGATTCCTTCCCCAAATTaGTCAAATTGCGGTCGTCCA | + |
Preference number: 5 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQIPSPN*SNCGRP Trigger: TGGACGACCGCAATTTGACAAATTTGGGGAAGGAAT...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACATTTTCCAAGATCAGTGTGTGGTCTTTGAAAAATCATCATTGATCTCTGCACTCAATTGGGTTTTGTaGAGTGAGCAAACTGAGGTA | + |
Preference number: 5 (lower is better) Translates to: HIFQDQCVVFEKSSLISALNWVL*SEQTEV Trigger: TACCTCAGTTTGCTCACTCAACAAAACCCAATTGAG...TGCAGAGATCAATGATGATTTTTCAAAGACCACACACTGATCTTGGAAAATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAAACTCTCAATTGGGTTTaGTTGAGTGAGCAAACTGAG | + |
Preference number: 5 (lower is better) Translates to: EQDALYTGSKSPKSKLNKTLNWV*LSEQTE Trigger: CTCAGTTTGCTCACTCAACAAAACCCAATTGAGAGT...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | GAACAGGATGCACTTTATACAGGTAGCAAATCACCAAAGAGTAAACTTAACAAATGTCTGCTGTCAGAGTaGAGATGGAGAGTTCATTAT | + |
Preference number: 5 (lower is better) Translates to: EQDALYTGSKSPKSKLNKCLLSE*RWRVHY Trigger: ATAATGAACTCTCCATCTCAACTCTGACAGCAGACA...TTTGTTAAGTTTACTCTTTGGTGATTTGCTACCTGTATAAAGTGCATCCTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | TGGAAGGAGCACTCTATATACTTTATTTCCACCAGTTACAGTGTTCACATTTTCGTCGTGTTTGACGTCTaGATGAGACAAATATCAAAA | + |
Preference number: 5 (lower is better) Translates to: WKEHSIYFISTSYSVHIFVVFDV*MRQISK Trigger: TTTTGATATTTGTCTCATCAAGACGTCAAACACGAC...GAAAATGTGAACACTGTAACTGGTGGAAATAAAGTATATAGAGTGCTCCTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS-3UTR CAA 90 bp | CACCACAATGTAATTTTCCTTAGAAAAAGGAGTAGCTGGTATTCATGTAAACAGTGCTTTATCCAACTTTaGTCCAACTTCAATAAGGAG | + |
Preference number: 5 (lower is better) Translates to: HHNVIFLRKRSSWYSCKQCFIQL*SNFNKE Trigger: CTCCTTATTGAAGTTGGACAAAAGTTGGATAAAGCA...CTGTTTACATGAATACCAGCTACTCCTTTTTCTAAGGAAAATTACATTGTGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | GCCATCGGCCTTGGATCACCATCTGAATCAGGTGGGTaGTATTCAGGACGGTCACTAGCCATCCCTGGCTTG | + |
Preference number: 6 (lower is better) Translates to: AIGLGSPSESGG*YSGRSLAIPGL Trigger: CAAGCCAGGGATGGCTAGTGACCGTCCTGAATATCACCCACCTGATTCAGATGGTGATCCAAGGCCGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | AGGTGGGTGATATTCAGGACGGTCACTAGCCATCCCTaGCTTGCAGCCACATCCAGCATTGCCTGGCATACT | + |
Preference number: 6 (lower is better) Translates to: RWVIFRTVTSHP*LAATSSIAWHT Trigger: AGTATGCCAGGCAATGCTGGATGTGGCTGCAAGCCAGGGATGGCTAGTGACCGTCCTGAATATCACCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | CCGGTGGGGGCGCCAAGCAGAACATTACAGTCTGTGTaGTACAGTGTGTGGAATATCTGCGTCTGTACAGGG | + |
Preference number: 6 (lower is better) Translates to: PVGAPSRTLQSV*YSVWNICVCTG Trigger: CCCTGTACAGACGCAGATATTCCACACACTGTATCACACAGACTGTAATGTTCTGCTTGGCGCCCCCACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | CAGTATCATAATCTGGGCAGGGCAGCATGGCTCGGCTaGGATGCGCTTGAAGCAAGAGATGGGCTTTGGTGT | + |
Preference number: 6 (lower is better) Translates to: QYHNLGRAAWLG*DALEARDGLWC Trigger: ACACCAAAGCCCATCTCTTGCTTCAAGCGCATCTCAGCCGAGCCATGCTGCCCTGCCCAGATTATGATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | GTGTGGATTCAACCTGCCGTAAGGTCCTGGCGACTATaGTTTCTAGCACTGGGCCTCTGTCTTCATGCAGCA | + |
Preference number: 6 (lower is better) Translates to: VWIQPAVRSWRL*FLALGLCLHAA Trigger: TGCTGCATGAAGACAGAGGCCCAGTGCTAGAAAGCATAGTCGCCAGGACCTTACGGCAGGTTGAATCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | GCGCACATAGAGGTAAGTGTAACTCATCCACCTCACTaGCTCTTCCACGTTGGTGACTGTCCCCAGCGCAAT | + |
Preference number: 6 (lower is better) Translates to: AHIEVSVTHPPH*LFHVGDCPQRN Trigger: ATTGCGCTGGGGACAGTCACCAACGTGGAAGAGGCAGTGAGGTGGATGAGTTACACTTACCTCTATGTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | ATGGAGCTGAACACATGGTCCTTCCCTTCACAGGCATaGATCAGCTCAGGAAGGCACTCAATGGATGTTCGG | + |
Preference number: 6 (lower is better) Translates to: MELNTWSFPSQA*ISSGRHSMDVR Trigger: CCGAACATCCATTGAGTGCCTTCCTGAGCTGATCCATGCCTGTGAAGGGAAGGACCATGTGTTCAGCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | CTGAAATGCAGGCTTGTTCATACTAGCCATGCGTGGGCAGTAATGTaGTCCTGGGAAACCCTGAATGTGAACTTCCAGTGGAACTGGGCG | + |
Preference number: 6 (lower is better) Translates to: LKCRLVHTSHAWAVM*SWETLNVNFQWNWA Trigger: CGCCCAGTTCCACTGGAAGTTCACATTCAGGGTTTCCCAGGACAACATTACTGCCCACGCATGGCTAGTATGAACAAGCCTGCATTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TGCTTCCTTAGTGTTGGGTCAATCTGGTACGCTTTGTaGCTGATGCCGTATGCTAGCGGGTTTGCTCGCATG | + |
Preference number: 6 (lower is better) Translates to: CFLSVGSIWYAL*LMPYASGFARM Trigger: CATGCGAGCAAACCCGCTAGCATACGGCATCAGTCACAAAGCGTACCAGATTGACCCAACACTAAGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | TCATACTCTGTGTGGATTCAACCTGCCGTAAGGTCCTaGCGACTATGCTTTCTAGCACTGGGCCTCTGTCTT | + |
Preference number: 6 (lower is better) Translates to: SYSVWIQPAVRS*RLCFLALGLCL Trigger: AAGACAGAGGCCCAGTGCTAGAAAGCATAGTCGCCAGGACCTTACGGCAGGTTGAATCCACACAGAGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | GGCTGTAACTCTTTCTCTACCATGGAGCTGAACACATaGTCCTTCCCTTCACAGGCATGGATCAGCTCAGGA | + |
Preference number: 6 (lower is better) Translates to: GCNSFSTMELNT*SFPSQAWISSG Trigger: TCCTGAGCTGATCCATGCCTGTGAAGGGAAGGACCATGTGTTCAGCTCCATGGTAGAGAAAGAGTTACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TGTAACTCATCCACCTCACTGCCTCTTCCACGTTGGTaGCTGTCCCCAGCGCAATCTCTGCATTTAGGTTAT | + |
Preference number: 6 (lower is better) Translates to: CNSSTSLPLPRW*LSPAQSLHLGY Trigger: ATAACCTAAATGCAGAGATTGCGCTGGGGACAGTCACCAACGTGGAAGAGGCAGTGAGGTGGATGAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TCTACCCAAATCCACCATGGTTCCCCCACTGTTCCATaGACCTGGTCATTCCAAGAGAAATCAGGGTGGATG | + |
Preference number: 6 (lower is better) Translates to: STQIHHGSPTVP*TWSFQEKSGWM Trigger: CATCCACCCTGATTTCTCTTGGAATGACCAGGTTCATGGAACAGTGGGGGAACCATGGTGGATTTGGGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | TGCCTGAAATGCAGGCTTGTTCATACTAGCCATGCGTaGGCAGTAATGTTGTCCTGGGAAACCCTGAATGTG | + |
Preference number: 6 (lower is better) Translates to: CLKCRLVHTSHA*AVMLSWETLNV Trigger: CACATTCAGGGTTTCCCAGGACAACATTACTGCCCACGCATGGCTAGTATGAACAAGCCTGCATTTCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | AGGCTTGTTCATACTAGCCATGCGTGGGCAGTAATGTaGTCCTGGGAAACCCTGAATGTGAACTTCCAGTGG | + |
Preference number: 6 (lower is better) Translates to: RLVHTSHAWAVM*SWETLNVNFQW Trigger: CCACTGGAAGTTCACATTCAGGGTTTCCCAGGACAACATTACTGCCCACGCATGGCTAGTATGAACAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | GGATTCCTTCTGGTAAAATCATCTTGGCTCCAGCTATaGATGCTGATGTTTCTCGGGCCTGAGCCTGGGAAT | + |
Preference number: 6 (lower is better) Translates to: GFLLVKSSWLQL*MLMFLGPEPGN Trigger: ATTCCCAGGCTCAGGCCCGAGAAACATCAGCATTCATAGCTGGAGCCAAGATGATTTTACCAGAAGGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | CAAACCCAACTGGCATTGGTTCACCATAGGGGATCCTaGCTTCCTCATACAGCTTGGTATTCTCTCTCTGGA | + |
Preference number: 6 (lower is better) Translates to: QTQLALVHHRGS*LPHTAWYSLSG Trigger: TCCAGAGAGAGAATACCAAGCTGTATGAGGAAGTCAGGATCCCCTATGGTGAACCAATGCCAGTTGGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | GTGGTTCAATGGTGCGATTATCCTCTCCAACTTCAATaGAGTGGGAAAGCTCCAATTCAACCAGAGACTGCC | + |
Preference number: 6 (lower is better) Translates to: VVQWCDYPLQLQ*SGKAPIQPETA Trigger: GGCAGTCTCTGGTTGAATTGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGAACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TATGTTTGGTATTGTGAGAAGAGAAGAGTCCTTGAGCCATCGGCCTaGGATCACCATCTGAATCAGGTGGGTGATATTCAGGACGGTCAC | + |
Preference number: 6 (lower is better) Translates to: YVWYCEKRRVLEPSA*DHHLNQVGDIQDGH Trigger: GTGACCGTCCTGAATATCACCCACCTGATTCAGATGGTGATCCAAGGCCGATGGCTCAAGGACTCTTCTCTTCTCACAATACCAAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | CAAATTGCGGTCGTCCAGCTCGGCCAAATATCTGCATaGCATCTAAAATTCCAAGGTCAACAAAGGAGCCTC | + |
Preference number: 6 (lower is better) Translates to: QIAVVQLGQISA*HLKFQGQQRSL Trigger: GAGGCTCCTTTGTTGACCTTGGAATTTTAGATGTCATGCAGATATTTGGCCGAGCTGGACGACCGCAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TTCCCTTTGGAAGCCCAAAATGGACTCTCTGTAGGCTaGCTTGAAGCACATACTCCTGATCAGCATGCAACT | + |
Preference number: 6 (lower is better) Translates to: FPLEAQNGLSVG*LEAHTPDQHAT Trigger: AGTTGCATGCTGATCAGGAGTATGTGCTTCAAGTCAGCCTACAGAGAGTCCATTTTGGGCTTCCAAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | ATGGTCATTTGTAGGATCTTCTACCCAAATCCACCATaGTTCCCCCACTGTTCCATGAACCTGGTCATTCCA | + |
Preference number: 6 (lower is better) Translates to: MVICRIFYPNPP*FPHCSMNLVIP Trigger: TGGAATGACCAGGTTCATGGAACAGTGGGGGAACCATGGTGGATTTGGGTAGAAGATCCTACAAATGACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | ATTCTGCCAGCTTCGACTAACTCCATCCCACTTTTCTaGTGTGGTGACAATAAGGTCAGCCTTAGCAATGGA | + |
Preference number: 6 (lower is better) Translates to: ILPASTNSIPLF*CGDNKVSLSNG Trigger: TCCATTGCTAAGGCTGACCTTATTGTCACCACACCAGAAAAGTGGGATGGAGTTAGTCGAAGCTGGCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | TCAATGGTGCGATTATCCTCTCCAACTTCAATGCAGTaGGAAAGCTCCAATTCAACCAGAGACTGCCCAATC | + |
Preference number: 6 (lower is better) Translates to: SMVRLSSPTSMQ*ESSNSTRDCPI Trigger: GATTGGGCAGTCTCTGGTTGAATTGGAGCTTTCCCACTGCATTGAAGTTGGAGAGGATAATCGCACCATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | CTCTCTATTAGAGACATAGCGGTCCTTACAGTGGCATaGCGAGCATGTACAAATACCATCACCTGGTGTCCA | + |
Preference number: 6 (lower is better) Translates to: LSIRDIAVLTVA*RACTNTITWCP Trigger: TGGACACCAGGTGATGGTATTTGTACATGCTCGCAATGCCACTGTAAGGACCGCTATGTCTCTAATAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TATTGTGAGAAGAGAAGAGTCCTTGAGCCATCGGCCTaGGATCACCATCTGAATCAGGTGGGTGATATTCAG | + |
Preference number: 6 (lower is better) Translates to: YCEKRRVLEPSA*DHHLNQVGDIQ Trigger: CTGAATATCACCCACCTGATTCAGATGGTGATCCAAGGCCGATGGCTCAAGGACTCTTCTCTTCTCACAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TGTGTCTTACTGGTAAGTCTGTGTATTCTTCTGCATCACTCAGAATaGACAGCAGTTCCTCAGTGCTGCACTCAGGTTTCAAACGGTCCT | + |
Preference number: 6 (lower is better) Translates to: CVLLVSLCILLHHSE*TAVPQCCTQVSNGP Trigger: AGGACCGTTTGAAACCTGAGTGCAGCACTGAGGAACTGCTGTCAATTCTGAGTGATGCAGAAGAATACACAGACTTACCAGTAAGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | CTTTCACAACAATGCCCAGTGGCTCTAGACGTTTGCTaGAGTAATTTGTCATCTCAGCTGCCAAGGCTTTCA | + |
Preference number: 6 (lower is better) Translates to: LSQQCPVALDVC*SNLSSQLPRLS Trigger: TGAAAGCCTTGGCAGCTGAGATGACAAATTACTTCAGCAAACGTCTAGAGCCACTGGGCATTGTTGTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | ACCCTGAATGTGAACTTCCAGTGGAACTGGGCGAACTaGTGGTCGGAAGTTAAACAAACCCATCTGCTTAAT | + |
Preference number: 6 (lower is better) Translates to: TLNVNFQWNWAN*WSEVKQTHLLN Trigger: ATTAAGCAGATGGGTTTGTTTAACTTCCGACCATCAGTTCGCCCAGTTCCACTGGAAGTTCACATTCAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | CCAAGAATTCTTATCATACTCTGTGTGGATTCAACCTaGCGTAAGGTCCTGGCGACTATGCTTTCTAGCACT | + |
Preference number: 6 (lower is better) Translates to: PRILIILCVDST*RKVLATMLSST Trigger: AGTGCTAGAAAGCATAGTCGCCAGGACCTTACGGCAGGTTGAATCCACACAGAGTATGATAAGAATTCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | TTGCAGACAATCCAAGAATTCTTATCATACTCTGTGTaGATTCAACCTGCCGTAAGGTCCTGGCGACTATGC | + |
Preference number: 6 (lower is better) Translates to: LQTIQEFLSYSV*IQPAVRSWRLC Trigger: GCATAGTCGCCAGGACCTTACGGCAGGTTGAATCCACACAGAGTATGATAAGAATTCTTGGATTGTCTGCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | GTCCATCTCTTGCTCATCCATATTCAACCACTGCTTTaGGTCTTCTTCAGTGGCCAGAAATGCTATCAACTC | + |
Preference number: 6 (lower is better) Translates to: VHLLLIHIQPLL*VFFSGQKCYQL Trigger: GAGTTGATAGCATTTCTGGCCACTGAAGAAGACCCAAAGCAGTGGTTGAATATGGATGAGCAAGAGATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | TTTCCTGAAAAGGTGAAGGTGGTGCTGCTCTATGTTTaGTATTGTGAGAAGAGAAGAGTCCTTGAGCCATCG | + |
Preference number: 6 (lower is better) Translates to: FPEKVKVVLLYV*YCEKRRVLEPS Trigger: CGATGGCTCAAGGACTCTTCTCTTCTCACAATACCAAACATAGAGCAGCACCACCTTCACCTTTTCAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | GTATTCTCTCTCTGGATTCCTTCTGGTAAAATCATCTaGGCTCCAGCTATGAATGCTGATGTTTCTCGGGCC | + |
Preference number: 6 (lower is better) Translates to: VFSLWIPSGKII*APAMNADVSRA Trigger: GGCCCGAGAAACATCAGCATTCATAGCTGGAGCCAAGATGATTTTACCAGAAGGAATCCAGAGAGAGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | AAGGTCAACAAAGGAGCCTCTTTTGGCAGCGTATATTaGTGTTCCCTTAATAACCACGGCATGTGCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: KVNKGASFGSVY*CSLNNHGMCRK Trigger: CTTCCTGCACATGCCGTGGTTATTAAGGGAACACAAATATACGCTGCCAAAAGAGGCTCCTTTGTTGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TGGCTGAGTTTATCGTGGGTTGTTATAATGATTCCTTCCCCAAATTaGTCAAATTGCGGTCGTCCAGCTCGGCCAAATATCTGCATGACA | + |
Preference number: 6 (lower is better) Translates to: WLSLSWVVIMIPSPN*SNCGRPARPNICMT Trigger: TGTCATGCAGATATTTGGCCGAGCTGGACGACCGCAATTTGACAAATTTGGGGAAGGAATCATTATAACAACCCACGATAAACTCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TCTACAGTTTTTCGGTCTCTTTCATGCAGGCCAGCATaGTGCATTCCTATTCCAAAAGCTAGAGTCAGCTTG | + |
Preference number: 6 (lower is better) Translates to: STVFRSLSCRPA*CIPIPKARVSL Trigger: CAAGCTGACTCTAGCTTTTGGAATAGGAATGCATCATGCTGGCCTGCATGAAAGAGACCGAAAAACTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | ATGTTGTCCATCTCTTGCTCATCCATATTCAACCACTaGTTTGGGTCTTCTTCAGTGGCCAGAAATGCTATC | + |
Preference number: 6 (lower is better) Translates to: MLSISCSSIFNH*FGSSSVARNAI Trigger: GATAGCATTTCTGGCCACTGAAGAAGACCCAAAGCAGTGGTTGAATATGGATGAGCAAGAGATGGACAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | GATATAAACTGGTTTTTCCTCAAACCCAACTGGCATTaGTTCACCATAGGGGATCCTGACTTCCTCATACAG | + |
Preference number: 6 (lower is better) Translates to: DINWFFLKPNWH*FTIGDPDFLIQ Trigger: CTGTATGAGGAAGTCAGGATCCCCTATGGTGAACCAATGCCAGTTGGGTTTGAGGAAAAACCAGTTTATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | CAAGTGCACCTCGTCAAGAATCAGGAGTTTTACGATTaGGGAAAGAGCAACATCCCCAACACTCTTTCTTGT | + |
Preference number: 6 (lower is better) Translates to: QVHLVKNQEFYD*GKSNIPNTLSC Trigger: ACAAGAAAGAGTGTTGGGGATGTTGCTCTTTCCCAAATCGTAAAACTCCTGATTCTTGACGAGGTGCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | AGCTTGAGGTTGGAATCTCGTACTGTTCCAATGATGTaGTCCATCTCTTGCTCATCCATATTCAACCACTGC | + |
Preference number: 6 (lower is better) Translates to: SLRLESRTVPMM*SISCSSIFNHC Trigger: GCAGTGGTTGAATATGGATGAGCAAGAGATGGACAACATCATTGGAACAGTACGAGATTCCAACCTCAAGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TTCATGCAGCAAGTGCACCTCGTCAAGAATCAGGAGTTTTACGATTaGGGAAAGAGCAACATCCCCAACACTCTTTCTTGTTACTACATC | + |
Preference number: 6 (lower is better) Translates to: FMQQVHLVKNQEFYD*GKSNIPNTLSCYYI Trigger: GATGTAGTAACAAGAAAGAGTGTTGGGGATGTTGCTCTTTCCCAAATCGTAAAACTCCTGATTCTTGACGAGGTGCACTTGCTGCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | TATGCTTTGCACCCCAAAGCTGTAATTGGTAAAGGTTaGAGGTCCAATAATTCTGTATGGGGAGGATGTCTC | + |
Preference number: 6 (lower is better) Translates to: YALHPKAVIGKG*RSNNSVWGGCL Trigger: GAGACATCCTCCCCATACAGAATTATTGGACCTTCAACCTTTACCAATTACAGCTTTGGGGTGCAAAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS TCA 72 bp | GGTGTTTCAGGAGTAAAGAACGAGATGGAAGCATCATaGTGTGTTCGAACAAATCCTACTCGTTTTACAGCC | + |
Preference number: 6 (lower is better) Translates to: GVSGVKNEMEAS*CVRTNPTRFTA Trigger: GGCTGTAAAACGAGTAGGATTTGTTCGAACACATCATGATGCTTCCATCTCGTTCTTTACTCCTGAAACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | GAATCTCGTACTGTTCCAATGATGTTGTCCATCTCTTaGTCATCCATATTCAACCACTGCTTTGGGTCTTCT | + |
Preference number: 6 (lower is better) Translates to: ESRTVPMMLSIS*SSIFNHCFGSS Trigger: AGAAGACCCAAAGCAGTGGTTGAATATGGATGAGCAAGAGATGGACAACATCATTGGAACAGTACGAGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | AAGTGCACCTCGTCAAGAATCAGGAGTTTTACGATTTaGGAAAGAGCAACATCCCCAACACTCTTTCTTGTT | + |
Preference number: 6 (lower is better) Translates to: KCTSSRIRSFTI*ERATSPTLFLV Trigger: AACAAGAAAGAGTGTTGGGGATGTTGCTCTTTCCCAAATCGTAAAACTCCTGATTCTTGACGAGGTGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TTATCGTGGGTTGTTATAATGATTCCTTCCCCAAATTaGTCAAATTGCGGTCGTCCAGCTCGGCCAAATATC | + |
Preference number: 6 (lower is better) Translates to: LSWVVIMIPSPN*SNCGRPARPNI Trigger: GATATTTGGCCGAGCTGGACGACCGCAATTTGACAAATTTGGGGAAGGAATCATTATAACAACCCACGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TGCATTCCTATTCCAAAAGCTAGAGTCAGCTTGAGGTaGGAATCTCGTACTGTTCCAATGATGTTGTCCATC | + |
Preference number: 6 (lower is better) Translates to: CIPIPKARVSLR*ESRTVPMMLSI Trigger: GATGGACAACATCATTGGAACAGTACGAGATTCCAACCTCAAGCTGACTCTAGCTTTTGGAATAGGAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | ATCTGCATGACATCTAAAATTCCAAGGTCAACAAAGGAGCCTCTTTaGGCAGCGTATATTTGTGTTCCCTTAATAACCACGGCATGTGCA | + |
Preference number: 6 (lower is better) Translates to: ICMTSKIPRSTKEPL*AAYICVPLITTACA Trigger: TGCACATGCCGTGGTTATTAAGGGAACACAAATATACGCTGCCAAAAGAGGCTCCTTTGTTGACCTTGGAATTTTAGATGTCATGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | GTTATCTGCAAGACTTTCCAGAAACTGACTCTCAATTGGGTTTTGTaGAGTGAGCAAACTGAGGTAATGGCTGAGTTTATCGTGGGTTGT | + |
Preference number: 6 (lower is better) Translates to: VICKTFQKLTLNWVL*SEQTEVMAEFIVGC Trigger: ACAACCCACGATAAACTCAGCCATTACCTCAGTTTGCTCACTCAACAAAACCCAATTGAGAGTCAGTTTCTGGAAAGTCTTGCAGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | CCGTGTGATGGGCTGAATGGAAGCTTCCATTGTAACAGAAGGAATTaGATGAACACACTGTTTGACCTTCAGTCCAATATTCACATGATG | + |
Preference number: 6 (lower is better) Translates to: PCDGLNGSFHCNRRN*MNTLFDLQSNIHMM Trigger: CATCATGTGAATATTGGACTGAAGGTCAAACAGTGTGTTCATCAAATTCCTTCTGTTACAATGGAAGCTTCCATTCAGCCCATCACACGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | GAATTAAGGAACCGATCTACAATTGTAATTCTGTTCTaGAGCAGCTTCTCAATCAGATCCAGTCCTTCAGGT | + |
Preference number: 6 (lower is better) Translates to: ELRNRSTIVILF*SSFSIRSSPSG Trigger: ACCTGAAGGACTGGATCTGATTGAGAAGCTGCTCCAGAACAGAATTACAATTGTAGATCGGTTCCTTAATTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035606.10 ENSMUST00000220355.2 |
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CDS CCA 72 bp | AGTGTGTGGAATATCTGCGTCTGTACAGGGTTAAAGTaGCTGAAGTTATATAGAGCTTCATATGCTTTGCAC | + |
Preference number: 6 (lower is better) Translates to: SVWNICVCTGLK*LKLYRASYALH Trigger: GTGCAAAGCATATGAAGCTCTATATAACTTCAGCCACTTTAACCCTGTACAGACGCAGATATTCCACACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | CAAATAGTAATAGGAGGCAATTCGACCACATGTCAGTaGTTCAATGGTGCGATTATCCTCTCCAACTTCAAT | + |
Preference number: 6 (lower is better) Translates to: QIVIGGNSTTCQ*FNGAIILSNFN Trigger: ATTGAAGTTGGAGAGGATAATCGCACCATTGAACCACTGACATGTGGTCGAATTGCCTCCTATTACTATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TTTCTGGTGTGGTCACCAGCATCTGAGTTCGTAAAATTTCACTTTTaGACAACTGCATATCTCCAGTCAATTCTTTCACAACAATGCCCA | + |
Preference number: 6 (lower is better) Translates to: FLVWSPASEFVKFHF*TTAYLQSILSQQCP Trigger: TGGGCATTGTTGTGAAAGAATTGACTGGAGATATGCAGTTGTCAAAAAGTGAAATTTTACGAACTCAGATGCTGGTGACCACACCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS GCA 72 bp | AAATGTCATAAAGAGAAATGCAGCCCCACTCTCAATTaGTTCTCTCCCATTATCCGTTCCAACGATTTGTTT | + |
Preference number: 6 (lower is better) Translates to: KCHKEKCSPTLN*FSPIIRSNDLF Trigger: AAACAAATCGTTGGAACGGATAATGGGAGAGAAGCAATTGAGAGTGGGGCTGCATTTCTCTTTATGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035606.10 ENSMUST00000220355.2 |
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CDS CAA 72 bp | ACATCTAAAATTCCAAGGTCAACAAAGGAGCCTCTTTaGGCAGCGTATATTTGTGTTCCCTTAATAACCACG | + |
Preference number: 6 (lower is better) Translates to: TSKIPRSTKEPL*AAYICVPLITT Trigger: CGTGGTTATTAAGGGAACACAAATATACGCTGCCAAAAGAGGCTCCTTTGTTGACCTTGGAATTTTAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | GATGTTATTGTACCTCCAGCAATCTCTGCATTTAAGTaGTCAGACAACACTCCTAATAAGCTTGATTCTACT | + |
Preference number: 6 (lower is better) Translates to: DVIVPPAISAFK*SDNTPNKLDST Trigger: AGTAGAATCAAGCTTATTAGGAGTGTTGTCTGACCACTTAAATGCAGAGATTGCTGGAGGTACAATAACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | ATTTTCCAATCATCCATTCTTTCACGTACTAGAGCTTaGAGGGGTGCAATATATACTGCCTTTGAAGTAGGA | + |
Preference number: 6 (lower is better) Translates to: IFQSSILSRTRA*RGAIYTAFEVG Trigger: TCCTACTTCAAAGGCAGTATATATTGCACCCCTCAAAGCTCTAGTACGTGAAAGAATGGATGATTGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | AGACATTTGGCCAATTCATTATTCGTATGGTCCTCATaGTGTCTTACTGGTAAGTCTGTGTATTCTTCTGCA | + |
Preference number: 6 (lower is better) Translates to: RHLANSLFVWSS*CLTGKSVYSSA Trigger: TGCAGAAGAATACACAGACTTACCAGTAAGACACAATGAGGACCATACGAATAATGAATTGGCCAAATGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TGGTCACCAGCATCTGAGTTCGTAAAATTTCACTTTTaGACAACTGCATATCTCCAGTCAATTCTTTCACAA | + |
Preference number: 6 (lower is better) Translates to: WSPASEFVKFHF*TTAYLQSILSQ Trigger: TTGTGAAAGAATTGACTGGAGATATGCAGTTGTCAAAAAGTGAAATTTTACGAACTCAGATGCTGGTGACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TTTTCCACACCTCCTGGAGCTGAGAGTTCACAGAAATaGTTTAACAAGGCATCTAATTCTTCTATTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: FSTPPGAESSQK*FNKASNSSISS Trigger: AGAAGAAATAGAAGAATTAGATGCCTTGTTAAACAATTTCTGTGAACTCTCAGCTCCAGGAGGTGTGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 90 bp | TCTATCCTAATTTTCCAATCATCCATTCTTTCACGTACTAGAGCTTaGAGGGGTGCAATATATACTGCCTTTGAAGTAGGATATTTGTTG | + |
Preference number: 6 (lower is better) Translates to: SILIFQSSILSRTRA*RGAIYTAFEVGYLL Trigger: CAACAAATATCCTACTTCAAAGGCAGTATATATTGCACCCCTCAAAGCTCTAGTACGTGAAAGAATGGATGATTGGAAAATTAGGATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CCA 72 bp | CAAATGAATGAGGATTTAATTCAATGGGAAGACATTTaGCCAATTCATTATTCGTATGGTCCTCATTGTGTC | + |
Preference number: 6 (lower is better) Translates to: QMNEDLIQWEDI*PIHYSYGPHCV Trigger: GACACAATGAGGACCATACGAATAATGAATTGGCCAAATGTCTTCCCATTGAATTAAATCCTCATTCATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |
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CDS CAA 72 bp | TTCTTCAAAACGAATCATCTTTGCTTTATCCAACTTTaGTCCAACTTCAATAAGGAGCTGTTCTCGATGCTT | + |
Preference number: 6 (lower is better) Translates to: FFKTNHLCFIQL*SNFNKELFSML Trigger: AAGCATCGAGAACAGCTCCTTATTGAAGTTGGACAAAAGTTGGATAAAGCAAAGATGATTCGTTTTGAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035606.10 |