Pregenerated sensors for ASCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044475Ensembl transcript IDs: ENSMUST00000050516.14, ENSMUST00000164083.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACAAGCCAAAGGGCCTGCTaGTGCCACACTGCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TAHSTVVGHTTELRSRVTSQRAC*CHTARL Trigger: GAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCT...TGTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTACATCCAGTCAGTCATaGTTCTCTGCTGCTCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: EHPSLPVNWSQRACCCHTTSSQS*FSAALP Trigger: CGGGAGAGCAGCAGAGAACCATGACTGACTGGATGT...AGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| 3UTR CCA 72 bp | GAGCATGGGCTGGAGCACCCTTCTCTGCCGGTCAACTaGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: EHGLEHPSLPVN*SQRACCCHTAR Trigger: CCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAGCCCATGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| 3UTR GCA 72 bp | TCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTaGCACACTGCCAGGCTCCCGACATCCAGTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SLPVNWSQRACC*HTARLPTSSQS Trigger: TGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| 3UTR GCA 72 bp | GGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTaGCAGGCTCCCGACATCCAGTCAGTCATGGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GQLEPKGLLLPH*QAPDIQSVMVL Trigger: GAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| 3UTR CCA 72 bp | CAGACGGTCTGTGCCATCTCACAGCGCACAGCACAGTaGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTVCAISQRTAQ*SATPQSSGAES Trigger: TGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGAGATGGCACAGACCGTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCGATCAACCAGCTCCTaGAGCCTGTTGGAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTGAKGPAAATLPGSRHRSTSS*SLLEPS Trigger: AGATGGCTCCAACAGGCTGCAGGAGCTGGTTGATCG...ATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR TCA 90 bp | CACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCACGCCATTTCGATGCTaGCCAGTGATCACGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLPVNWSQRACCCHTATPFRC*PVITIS Trigger: GGAAATCGTGATCACTGGTCAGCATCGAAATGGCGT...GGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | TCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACGATCAACCAGCTCCTaGAGCCTGTTGGAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRTAQWSATPQSSGAESRSTSS*SLLEPS Trigger: AGATGGCTCCAACAGGCTGCAGGAGCTGGTTGATCG...TGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | CACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACGCTCCTGCAGCCTGTTaGAGCCATCTTTCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAQHSGRPHHRAQEQSHAPAAC*SHLSCG Trigger: TCCACATGAAAGATGGCTCCAACAGGCTGCAGGAGC...GTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGGAGCATGGGCTGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAGCTCCTGCAGCCTGTTaGAGCCATCTTTCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RREEHGLEHPSLPVNWSQAPAAC*SHLSCG Trigger: TCCACATGAAAGATGGCTCCAACAGGCTGCAGGAGC...TTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAGCCCATGCTCCTCCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGAAGTGGGTAAAAGGCTaGCTCCTCCTGAACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAAATLPGSRHPVSHGSLKWVKG*LLLNVS Trigger: GGACACGTTCAGGAGGAGGCAGCCTTTTACCCACTT...CAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCGTCTGCTGGATCTCCTaGTCACTTAGAAGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCRSTGAKGPAAATLPGVCWIS*SLRSTN Trigger: GTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGAC...GCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | ACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACATCCTCTTTACAGCGCTaGAGGATCTCACACGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAHSTVVGHTTELRSRVTSSLQR*RISHVC Trigger: GCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGA...TGTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | TCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCATCCTCTTTACAGCGCTaGAGGATCTCACACGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRTAQWSATPQSSGAESSSLQR*RISHVC Trigger: GCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGA...TGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | ACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACACTCAGCACCTCCTCCTaGAACATCAGAAACCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAHSTVVGHTTELRSRVTLSTSS*NIRNRS Trigger: GGAACGGTTTCTGATGTTCCAGGAGGAGGTGCTGAG...TGTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | TCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACTCAGCACCTCCTCCTaGAACATCAGAAACCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRTAQWSATPQSSGAESLSTSS*NIRNRS Trigger: GGAACGGTTTCTGATGTTCCAGGAGGAGGTGCTGAG...TGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR TCA 90 bp | TCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCAACGCCATTTCGATGCTaGCCAGTGATCACGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRTAQWSATPQSSGAESTPFRC*PVITIS Trigger: GGAAATCGTGATCACTGGTCAGCATCGAAATGGCGT...TGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR TCA 90 bp | CGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATATCAGAAACCGTTCCTaGACCTCAACTTCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTGAKGPAAATLPGSRHIRNRS*TSTSLR Trigger: CCTCAATGAAGTTGAGGTTCAGGAACGGTTTCTGAT...ATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAACGATTTCCCCTTCATaGCCATGCTTCGGAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEPKGLLLPHCQAPDIQSTISPS*PCFGML Trigger: TAACATTCCGAAGCATGGGCATGAAGGGGAAATCGT...TGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | TGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTGCTAAGTGGGTAAAAGGCTaGCTCCTCCTGAACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCHTARLPTSSQSWFSAAKWVKG*LLLNVS Trigger: GGACACGTTCAGGAGGAGGCAGCCTTTTACCCACTT...AGCAGCAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CTGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACCATTCATGTATTCGATaGCTGCCATCTCGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEHPSLPVNWSQRACCCHHSCIR*LPSRLP Trigger: TGGAAGTCGAGATGGCAGGCATCGAATACATGAATG...GTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | AGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGAAGAAGGAAAGGAAGTaGGTAAAAGGCTGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STLLCRSTGAKGPAAATLKKERK*VKGCLL Trigger: GAGGAGGCAGCCTTTTACCCACTTCCTTTCCTTCTT...CAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACAATCTCACACGTCTGCTaGATCTCCTGCTCACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: WSTLLCRSTGAKGPAAATISHVC*ISCSLR Trigger: TCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGAT...TGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | AGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGATCTCACACGTCTGCTaGATCTCCTGCTCACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: STLLCRSTGAKGPAAATLISHVC*ISCSLR Trigger: TCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGAT...CAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CTGTGCCATCTCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGACGATTTCCCCTTCATaGCCATGCTTCGGAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LCHLTAHSTVVGHTTELRTISPS*PCFGML Trigger: TAACATTCCGAAGCATGGGCATGAAGGGGAAATCGT...CCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGAGATGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGCATTCATGTATTCGATaGCTGCCATCTCGACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PKGLLLPHCQAPDIQSVMHSCIR*LPSRLP Trigger: TGGAAGTCGAGATGGCAGGCATCGAATACATGAATG...CATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR TCA 90 bp | GCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTGCTCTCCATCAGAAACCGTTCCTaGACCTCAACTTCATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ATLPGSRHPVSHGSLLLSIRNRS*TSTSLR Trigger: CCTCAATGAAGTTGAGGTTCAGGAACGGTTTCTGAT...GGAGAGCAGCAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR TCA 90 bp | CTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCAAGACTCTCTCTCCTTaGAGATATATTTGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCRSTGAKGPAAATLPGKTLSP*RYICHL Trigger: CAGATGGCAAATATATCTTCAAGGAGAGAGAGTCTT...GCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | TGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTGCTGTCTGCTGGATCTCCTaGTCACTTAGAAGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCHTARLPTSSQSWFSAAVCWIS*SLRSTN Trigger: GTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGAC...AGCAGCAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | CAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTCGTCTTCTTCATGTTaGTACTGTTTCTCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: QRACCCHTARLPTSSQSWSSSSC*YCFSWM Trigger: CATCCAGGAGAAACAGTACCAACATGAAGAAGACGA...CCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGGAGCATGGGCTGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAATCGTCTTCTTCATGTTaGTACTGTTTCTCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: RREEHGLEHPSLPVNWSQSSSSC*YCFSWM Trigger: CATCCAGGAGAAACAGTACCAACATGAAGAAGACGA...TTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAGCCCATGCTCCTCCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | GAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTTGGGGTTCTGAAAAATaGTGCTATCAACTCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: EHPSLPVNWSQRACCCHTWGSEK*CYQLHD Trigger: ATCGTGGAGTTGATAGCACCATTTTTCAGAACCCCA...AGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | ACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACAGGTTCTGAAAAATGGTaGTATCAACTCCACGATCCT | + |
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Preference number: 4 (lower is better) Translates to: TAHSTVVGHTTELRSRVTGSEKW*YQLHDP Trigger: AGGATCGTGGAGTTGATAGCACCATTTTTCAGAACC...TGTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATGATATATTTGCCATCTaGTGTGTAGAGATTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: RSTGAKGPAAATLPGSRHDIFAI*CVEIVP Trigger: AGGTACAATCTCTACACAGCAGATGGCAAATATATC...ATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR GCA 90 bp | GAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGATATATTTGCCATCTaGTGTGTAGAGATTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: EHPSLPVNWSQRACCCHTDIFAI*CVEIVP Trigger: AGGTACAATCTCTACACAGCAGATGGCAAATATATC...AGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | CTGTGCCATCTCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGACTGTTTCTCCTGGATaGGATTCTTTCTATAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LCHLTAHSTVVGHTTELRTVSPG*DSFYNS Trigger: GGAATTATAGAAAGAATCCCATCCAGGAGAAACAGT...CCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGAGATGGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGGAGCATGGGCTGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAACTGTTTCTCCTGGATaGGATTCTTTCTATAATTCC | + |
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Preference number: 4 (lower is better) Translates to: RREEHGLEHPSLPVNWSQTVSPG*DSFYNS Trigger: GGAATTATAGAAAGAATCCCATCCAGGAGAAACAGT...TTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAGCCCATGCTCCTCCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CCA 90 bp | TGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTGCTTGGGGTTCTGAAAAATaGTGCTATCAACTCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: CCHTARLPTSSQSWFSAAWGSEK*CYQLHD Trigger: ATCGTGGAGTTGATAGCACCATTTTTCAGAACCCCA...AGCAGCAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 90 bp | CAGGCTAGGGGCACTGACGGTGGCCCGGAATCCGTGAGGGGTCTGTaGCACCTCGTAGGCACCGCAGGGCTCATCAGAGTATTCCATGGA | + |
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Preference number: 5 (lower is better) Translates to: QARGTDGGPESVRGL*HLVGTAGLIRVFHG Trigger: TCCATGGAATACTCTGATGAGCCCTGCGGTGCCTACGAGGTGGCACAGACCCCTCACGGATTCCGGGCCACCGTCAGTGCCCCTAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATTACCTGCCTTCCGCGTaGGGGTCTTTCCTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RSTGAKGPAAATLPGSRHYLPSA*GSFLSS Trigger: ACTGCTCAGGAAAGACCCCAACGCGGAAGGCAGGTA...ATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CTGGAGCACCCTTCTCTGCCGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACTCAACTCCACGATCCTaGGAGCACTTCCTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LEHPSLPVNWSQRACCCHSTPRS*EHFLST Trigger: GGTGCTGAGGAAGTGCTCCAAGGATCGTGGAGTTGA...GTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCGGCAGAGAAGGGTGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGAGCTCCTGCAGCCTGTaGGAGCCATCTTTCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: QRACCCHTARLPTSSQSWSSCSL*EPSFMW Trigger: CCACATGAAAGATGGCTCCAACAGGCTGCAGGAGCT...CCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | GCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTGCTCTCCTACCTGCCTTCCGCGTaGGGGTCTTTCCTGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ATLPGSRHPVSHGSLLLSYLPSA*GSFLSS Trigger: ACTGCTCAGGAAAGACCCCAACGCGGAAGGCAGGTA...GGAGAGCAGCAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 90 bp | CCTCCTCCTGAACGTGTCCAGGAGCACGTCGATCCGTGTTCGCGCTaGGACCACGCCATTTCGATGCTGACCAGTGATCACGATTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: PPPERVQEHVDPCSR*DHAISMLTSDHDFP Trigger: GGGGAAATCGTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAACACGGATCGACGTGCTCCTGGACACGTTCAGGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | ACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAGCAGAGTCACATCAACTCCACGATCCTaGGAGCACTTCCTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: TAHSTVVGHTTELRSRVTSTPRS*EHFLST Trigger: GGTGCTGAGGAAGTGCTCCAAGGATCGTGGAGTTGA...TGTGACTCTGCTCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 90 bp | TCCGCGTTGGGGTCTTTCCTGAGCAGTGTGTTCATGACCGTGGCGTaGAGTTTCACACTGGTCCACTCTTTCACGATGAGTCCCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SALGSFLSSVFMTVA*SFTLVHSFTMSPRD Trigger: GTCCCTGGGACTCATCGTGAAAGAGTGGACCAGTGTGAAACTGCACGCCACGGTCATGAACACACTGCTCAGGAAAGACCCCAACGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCACTCGTCTTCTTCATGTaGGTACTGTTTCTCCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LEPKGLLLPHCQAPDIQSLVFFM*VLFLLD Trigger: ATCCAGGAGAAACAGTACCAACATGAAGAAGACGAG...TGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 90 bp | AGCACGTCGATCCGTGTTCGCGCTGAGACCACGCCATTTCGATGCTaGCCAGTGATCACGATTTCCCCTTCATGCCCATGCTTCGGAATG | + |
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Preference number: 5 (lower is better) Translates to: STSIRVRAETTPFRC*PVITISPSCPCFGM Trigger: CATTCCGAAGCATGGGCATGAAGGGGAAATCGTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAACACGGATCGACGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 90 bp | TGCAGTTTCACACTGGTCCACTCTTTCACGATGAGTCCCAGGGACTaGAAACGCTCCAGCACTCGATCAACCAGCTCCTGCAGCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: CSFTLVHSFTMSPRD*KRSSTRSTSSCSLL Trigger: CAACAGGCTGCAGGAGCTGGTTGATCGAGTGCTGGAGCGTTTTCAGTCCCTGGGACTCATCGTGAAAGAGTGGACCAGTGTGAAACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCTGCCACACTGCCAGGCTCCCGACATCCAGTCAGTCATGGTTCTCTGCTCGTCTTCTTCATGTaGGTACTGTTTCTCCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PAAATLPGSRHPVSHGSLLVFFM*VLFLLD Trigger: ATCCAGGAGAAACAGTACCAACATGAAGAAGACGAG...CAGAGAACCATGACTGACTGGATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | CGGTCAACTGGAGCCAAAGGGCCTGCTGCTGCCACACTGCCAGGCTCCCGACATAAAGACTCTCTCTCCTaGAAGATATATTTGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: RSTGAKGPAAATLPGSRHKDSLS*KIYLPS Trigger: AGATGGCAAATATATCTTCAAGGAGAGAGAGTCTTT...ATGTCGGGAGCCTGGCAGTGTGGCAGCAGCAGGCCCTTTGGCTCCAGTTGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS-3UTR CAA 90 bp | TGTGCCATCTCACAGCGCACAGCACAGTGGTCGGCCACACCACAGAGCTCAGGAAAAGACTCTCTCTCCTaGAAGATATATTTGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: CAISQRTAQWSATPQSSGKDSLS*KIYLPS Trigger: AGATGGCAAATATATCTTCAAGGAGAGAGAGTCTTT...TCCTGAGCTCTGTGGTGTGGCCGACCACTGTGCTGTGCGCTGTGAGATGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 90 bp | TCTGTGCCACCTCGTAGGCACCGCAGGGCTCATCAGAGTATTCCATaGAGTCAGGATAGAAATCCTCGTCTTCTTCATGTTGGTACTGTT | + |
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Preference number: 5 (lower is better) Translates to: SVPPRRHRRAHQSIP*SQDRNPRLLHVGTV Trigger: AACAGTACCAACATGAAGAAGACGAGGATTTCTATCCTGACTCCATGGAATACTCTGATGAGCCCTGCGGTGCCTACGAGGTGGCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 90 bp | GAGCACTTCCTCAGCACCTCCTCCTGGAACATCAGAAACCGTTCCTaGACCTCAACTTCATTGAGGAAGAAGGAAAGGAAGTGGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: EHFLSTSSWNIRNRS*TSTSLRKKERKWVK Trigger: TTTTACCCACTTCCTTTCCTTCTTCCTCAATGAAGTTGAGGTTCAGGAACGGTTTCTGATGTTCCAGGAGGAGGTGCTGAGGAAGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 90 bp | GGTCTGCCTCCAGAAATGTCATTAATGAATTCCTCTTTACAGCGCTaGAGGATCTCACACGTCTGCTGGATCTCCTGCTCACTTAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: GLPPEMSLMNSSLQR*RISHVCWISCSLRS Trigger: ACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGAATTCATTAATGACATTTCTGGAGGCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 90 bp | TTAATGAATTCCTCTTTACAGCGCTGCAGGATCTCACACGTCTGCTaGATCTCCTGCTCACTTAGAAGTACCAACATCCCAATAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LMNSSLQRCRISHVC*ISCSLRSTNIPIVR Trigger: CCTAACTATTGGGATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGAATTCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 90 bp | TCATTAATGAATTCCTCTTTACAGCGCTGCAGGATCTCACACGTCTaGTGGATCTCCTGCTCACTTAGAAGTACCAACATCCCAATAGTT | + |
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Preference number: 5 (lower is better) Translates to: SLMNSSLQRCRISHV*WISCSLRSTNIPIV Trigger: AACTATTGGGATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGAATTCATTAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 90 bp | GATAGAAATCCTCGTCTTCTTCATGTTGGTACTGTTTCTCCTGGATaGGATTCTTTCTATAATTCCGTCCATCGAACGTTACAATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: DRNPRLLHVGTVSPG*DSFYNSVHRTLQSV Trigger: CACAGATTGTAACGTTCGATGGACGGAATTATAGAAAGAATCCCATCCAGGAGAAACAGTACCAACATGAAGAAGACGAGGATTTCTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 90 bp | CAAATGTCTTTAAAATGTTCCGGCCATCAAAAGACTCTCTCTCCTTaGAGATATATTTGCCATCTGCTGTGTAGAGATTGTACCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: QMSLKCSGHQKTLSP*RYICHLLCRDCTCL Trigger: AAGGCAGGTACAATCTCTACACAGCAGATGGCAAATATATCTTCAAGGAGAGAGAGTCTTTTGATGGCCGGAACATTTTAAAGACATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | GGCACTGACGGTGGCCCGGAATCCGTGAGGGGTCTGTaGCACCTCGTAGGCACCGCAGGGCTCATCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: GTDGGPESVRGL*HLVGTAGLIRV Trigger: TACTCTGATGAGCCCTGCGGTGCCTACGAGGTGGCACAGACCCCTCACGGATTCCGGGCCACCGTCAGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | GAACGTGTCCAGGAGCACGTCGATCCGTGTTCGCGCTaGGACCACGCCATTTCGATGCTGACCAGTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: ERVQEHVDPCSR*DHAISMLTSDH Trigger: GTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAACACGGATCGACGTGCTCCTGGACACGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | ATCCGTGTTCGCGCTGAGACCACGCCATTTCGATGCTaGCCAGTGATCACGATTTCCCCTTCATGCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: IRVRAETTPFRC*PVITISPSCPC Trigger: GCATGGGCATGAAGGGGAAATCGTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAACACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | ACACTGGTCCACTCTTTCACGATGAGTCCCAGGGACTaGAAACGCTCCAGCACTCGATCAACCAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLVHSFTMSPRD*KRSSTRSTSSC Trigger: GCAGGAGCTGGTTGATCGAGTGCTGGAGCGTTTTCAGTCCCTGGGACTCATCGTGAAAGAGTGGACCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | TTCGCGCTGAGACCACGCCATTTCGATGCTGACCAGTaGTCACGATTTCCCCTTCATGCCCATGCTTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: FALRPRHFDADQ*SRFPLHAHASE Trigger: TTCCGAAGCATGGGCATGAAGGGGAAATCGTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | TGGCGTGCAGTTTCACACTGGTCCACTCTTTCACGATaGGTCCCAGGGACTGAAAACGCTCCAGCACTCGAT | + |
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Preference number: 6 (lower is better) Translates to: WRAVSHWSTLSR*VPGTENAPALD Trigger: ATCGAGTGCTGGAGCGTTTTCAGTCCCTGGGACTCATCGTGAAAGAGTGGACCAGTGTGAAACTGCACGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | GGGTCTTTCCTGAGCAGTGTGTTCATGACCGTGGCGTaGAGTTTCACACTGGTCCACTCTTTCACGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: GSFLSSVFMTVA*SFTLVHSFTMS Trigger: ACTCATCGTGAAAGAGTGGACCAGTGTGAAACTGCACGCCACGGTCATGAACACACTGCTCAGGAAAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | CAGCGCTGCAGGATCTCACACGTCTGCTGGATCTCCTaGTCACTTAGAAGTACCAACATCCCAATAGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: QRCRISHVCWIS*SLRSTNIPIVR Trigger: CCTAACTATTGGGATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | CACCATAGCAGGATCGTCATTCATGTATTCGATGCCTaGCATCTCGACTTCCAGGGGTCTGCCTCCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: HHSRIVIHVFDA*HLDFQGSASRN Trigger: ATTTCTGGAGGCAGACCCCTGGAAGTCGAGATGGCAGGCATCGAATACATGAATGACGATCCTGCTATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 72 bp | TCCTCTTTACAGCGCTGCAGGATCTCACACGTCTGCTaGATCTCCTGCTCACTTAGAAGTACCAACATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSLQRCRISHVC*ISCSLRSTNIP Trigger: TGGGATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 72 bp | CCTCGTAGGCACCGCAGGGCTCATCAGAGTATTCCATaGAGTCAGGATAGAAATCCTCGTCTTCTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: PRRHRRAHQSIP*SQDRNPRLLHV Trigger: AACATGAAGAAGACGAGGATTTCTATCCTGACTCCATGGAATACTCTGATGAGCCCTGCGGTGCCTACGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 72 bp | GGTTCTGAAAAATGGTGCTATCAACTCCACGATCCTTaGAGCACTTCCTCAGCACCTCCTCCTGGAACATCA | + |
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Preference number: 6 (lower is better) Translates to: GSEKWCYQLHDP*STSSAPPPGTS Trigger: TGATGTTCCAGGAGGAGGTGCTGAGGAAGTGCTCCAAGGATCGTGGAGTTGATAGCACCATTTTTCAGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | CTCAGCACCTCCTCCTGGAACATCAGAAACCGTTCCTaGACCTCAACTTCATTGAGGAAGAAGGAAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSTSSWNIRNRS*TSTSLRKKERK Trigger: CTTCCTTTCCTTCTTCCTCAATGAAGTTGAGGTTCAGGAACGGTTTCTGATGTTCCAGGAGGAGGTGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | AATTCCTCTTTACAGCGCTGCAGGATCTCACACGTCTaGTGGATCTCCTGCTCACTTAGAAGTACCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: NSSLQRCRISHV*WISCSLRSTNI Trigger: GATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS GCA 72 bp | CCAGAAATGTCATTAATGAATTCCTCTTTACAGCGCTaGAGGATCTCACACGTCTGCTGGATCTCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PEMSLMNSSLQR*RISHVCWISCS Trigger: TGAGCAGGAGATCCAGCAGACGTGTGAGATCCTGCAGCGCTGTAAAGAGGAATTCATTAATGACATTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CCA 72 bp | CCTCGTCTTCTTCATGTTGGTACTGTTTCTCCTGGATaGGATTCTTTCTATAATTCCGTCCATCGAACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PRLLHVGTVSPG*DSFYNSVHRTL Trigger: TAACGTTCGATGGACGGAATTATAGAAAGAATCCCATCCAGGAGAAACAGTACCAACATGAAGAAGACGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS CAA 72 bp | CATGGAGTCAGGATAGAAATCCTCGTCTTCTTCATGTaGGTACTGTTTCTCCTGGATGGGATTCTTTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: HGVRIEILVFFM*VLFLLDGILSI Trigger: TATAGAAAGAATCCCATCCAGGAGAAACAGTACCAACATGAAGAAGACGAGGATTTCTATCCTGACTCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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| CDS TCA 72 bp | TTAAAATGTTCCGGCCATCAAAAGACTCTCTCTCCTTaGAGATATATTTGCCATCTGCTGTGTAGAGATTGT | + |
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Preference number: 6 (lower is better) Translates to: LKCSGHQKTLSP*RYICHLLCRDC Trigger: ACAATCTCTACACAGCAGATGGCAAATATATCTTCAAGGAGAGAGAGTCTTTTGATGGCCGGAACATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050516.14 ENSMUST00000164083.4 |
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