Pregenerated sensors for ASB6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039483Ensembl transcript IDs: ENSMUST00000041726.4, ENSMUST00000129628.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCATGTGCCTCCGCCATGGGACGAACCACAGCTGCCAGGGCTCTaGGGGGCCTGGGCCTCATTCCCTGTGCACAGCCTGGTCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RHVPPPWDEPQLPGL*GAWASFPVHSLVSS Trigger: GGAGCTGACCAGGCTGTGCACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCCCATGGCGGAGGCACATGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 90 bp | GATCCAAGAGGCGCTGCAGGCAGGGCAGGCGTTCGGGTTCCTCGCTaGCCAGATCCAAGGGGCTGCTCTCATGGATCCGGTCCCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: DPRGAAGRAGVRVPR*PDPRGCSHGSGPSC Trigger: ACAGGAGGGACCGGATCCATGAGAGCAGCCCCTTGGATCTGGCCAGCGAGGAACCCGAACGCCTGCCCTGCCTGCAGCGCCTCTTGGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 90 bp | AACCACAGCTGCCAGGGCTCTGAGGGGCCTGGGCCTCATTCCCTGTaGACAGCCTGGTCAGCTCCTAATACAGAGGGCAGCTGTATCCCA | + |
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Preference number: 1 (lower is better) Translates to: NHSCQGSEGPGPHSL*TAWSAPNTEGSCIP Trigger: TGGGATACAGCTGCCCTCTGTATTAGGAGCTGACCAGGCTGTGCACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 90 bp | GGGCTGCTCTCATGGATCCGGTCCCTCCTGTTGATGTCAGCCCCGTaGCGCACCAGCAGCTCAACCATGTCAGGCTGGTTTCTCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: GLLSWIRSLLLMSAP*RTSSSTMSGWFLRT Trigger: TGTCCTGAGAAACCAGCCTGACATGGTTGAGCTGCTGGTGCGCCACGGGGCTGACATCAACAGGAGGGACCGGATCCATGAGAGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 90 bp | CTTCCTGGTAGAATGGAGAGTGAGCCTTCTGCTCCAGCAGCTCCGTaGGGACCAGGATCCGGCTCTCCTCGCTGGAAGCAGAACTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LPGRMESEPSAPAAP*GPGSGSPRWKQNSG Trigger: GCCTGAGTTCTGCTTCCAGCGAGGAGAGCCGGATCCTGGTCCTCACGGAGCTGCTGGAGCAGAAGGCTCACTCTCCATTCTACCAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 90 bp | CAGCTGCCCGGGTCAGGCCCAGCTCAGCCATCTTCAGCAACGCATTaGTCACGCCTTCCTGGTAGAATGGAGAGTGAGCCTTCTGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: QLPGSGPAQPSSATH*SRLPGRMESEPSAP Trigger: TGGAGCAGAAGGCTCACTCTCCATTCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGATGGCTGAGCTGGGCCTGACCCGGGCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 90 bp | CCAGGGCGTGAAGTAAAGCTGTCTTCCCATTCTTGTCAGCTGCATTaGCATCTGCTCCAAGATCCAAGAGGCGCTGCAGGCAGGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: PGREVKLSSHSCQLH*HLLQDPRGAAGRAG Trigger: GCCTGCCCTGCCTGCAGCGCCTCTTGGATCTTGGAGCAGATGTCAATGCAGCTGACAAGAATGGGAAGACAGCTTTACTTCACGCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CCA 90 bp | CTCAGCCATCTTCAGCAACGCATTGCTCACGCCTTCCTGGTAGAATaGAGAGTGAGCCTTCTGCTCCAGCAGCTCCGTGAGGACCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LSHLQQRIAHAFLVE*RVSLLLQQLREDQD Trigger: ATCCTGGTCCTCACGGAGCTGCTGGAGCAGAAGGCTCACTCTCCATTCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGATGGCTGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 90 bp | CATCTCTGCTCATTCCCAAAAGCCAAGCTGACTGCGAAGATCTCGTaGGGGCTTGGCACTAGAGTGGAGCCAGCTTCAGGCCTCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: HLCSFPKAKLTAKIS*GLGTRVEPASGLSS Trigger: ACTGCTGAGGCCTGAAGCTGGCTCCACTCTAGTGCCAAGCCCTCACGAGATCTTCGCAGTCAGCTTGGCTTTTGGGAATGAGCAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR GCA 90 bp | GGAGGAGCCGGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTaGTGGCCAGGGCGTGAAGTAAAGCTGTCTTCCCATTCTTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GGAGCFLCCGSAHHR*WPGREVKLSSHSCQ Trigger: CTGACAAGAATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CCA 90 bp | GGAGCCGGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTGCTaGCCAGGGCGTGAAGTAAAGCTGTCTTCCCATTCTTGTCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: GAGCFLCCGSAHHRC*PGREVKLSSHSCQL Trigger: CAGCTGACAAGAATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 90 bp | TTTTCTGTGTTGTGGATCTGCACACCATCGCTGCTGGCCAGGGCGTaGAGTAAAGCTGTCTTCCCATTCTTGTCAGCTGCATTGACATCT | + |
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Preference number: 1 (lower is better) Translates to: FSVLWICTPSLLARA*SKAVFPFLSAALTS Trigger: AGATGTCAATGCAGCTGACAAGAATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGATCCAAGAGGCGCTGCAGGCAGGGCAGGCGTTCGGGTTCCTCGCTGGCCAGATCCAAGGGGCTaGTCTCATGGATCCGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LQDPRGAAGRAGVRVPRWPDPRG*SHGSGP Trigger: GGGACCGGATCCATGAGAGCAGCCCCTTGGATCTGG...CCAGCGAGGAACCCGAACGCCTGCCCTGCCTGCAGCGCCTCTTGGATCTTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGCCATGGGACGAACCACCCCATTGTGAAACACTaGGAGGGAGGGGGCGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: WHWSWETPGMCLRHGTNHPIVKH*EGGGGD Trigger: ATCCCCGCCCCCTCCCTCTCAGTGTTTCACAATGGG...GTGGTTCGTCCCATGGCGGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGCCATGGGACGAACCTGGAGCAGCCTTCCATaGCTTTGGCCTCCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FGTGPGKPQACASAMGRTWSSLP*LWPPGH Trigger: GTGCCCTGGAGGCCAAAGGCATGGAAGGCTGCTCCA...GGTTCGTCCCATGGCGGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCCTCGCTGGCCAGATCCAAGGGGCTGCTCTCATGGATCCGGTCCCTCCTCAGGGTCTTCGAAATTaGGGTTGGCCCCACTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GFLAGQIQGAALMDPVPPQGLRN*GWPHSA Trigger: TGCAGAGTGGGGCCAACCTCAATTTCGAAGACCCTG...AGGAGGGACCGGATCCATGAGAGCAGCCCCTTGGATCTGGCCAGCGAGGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCAGCTGCCAGGGCTCTaGGGGGCCTGGGCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: PLINPAVLVMPLNRRHQPQLPGL*GAWASF Trigger: GAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTG...GGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGGTCAGCTCCTAATACAGAGGGCAGCTGTATCCCATCTGCACTGGCCCAGCCTTCCATGCCTTTaGCCTCCAGGGCACCACCCT | + |
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Preference number: 2 (lower is better) Translates to: QPGQLLIQRAAVSHLHWPSLPCL*PPGHHP Trigger: AGGGTGGTGCCCTGGAGGCCAAAGGCATGGAAGGCT...GGGCCAGTGCAGATGGGATACAGCTGCCCTCTGTATTAGGAGCTGACCAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCAGGAGGAGCCGGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTAGCTCCCACTCCCGCTaGGACAACCACAGAGGACCG | + |
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Preference number: 2 (lower is better) Translates to: SLQEEPDVFCVVDLHTIASSHSR*DNHRGP Trigger: CGGTCCTCTGTGGTTGTCGCAGCGGGAGTGGGAGCT...AGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCCTCCTGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCAGCTCAACCATGTCAGGCTGGTTTCTCAGGACAGCAATGTGCAGGGCTTCCGGCTCTCCTCGCTaGAAGCAGAACTCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TSSSTMSGWFLRTAMCRASGSPR*KQNSGW Trigger: CCAGCCTGAGTTCTGCTTCCAGCGAGGAGAGCCGGA...AGCCCTGCACATTGCTGTCCTGAGAAACCAGCCTGACATGGTTGAGCTGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCTGCCCCTCCCTCCAGGAGGAGCCGGATGTTTTCTGTGTTGTGGATCTGCATCTTCAGCAACGCATTaGTCACGCCTTCCTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RLPLPPGGAGCFLCCGSASSATH*SRLPGR Trigger: TCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGA...TGCAGATCCACAACACAGAAAACATCCGGCTCCTCCTGGAGGGAGGGGCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCCGGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTGCTGGCCAGAGCTGCATTGACATCTaGTCCAAGATCCAAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: EEPDVFCVVDLHTIAAGQSCIDI*SKIQEA Trigger: CGCCTCTTGGATCTTGGAGCAGATGTCAATGCAGCT...CTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 72 bp | CCTCCGCCATGGGACGAACCACAGCTGCCAGGGCTCTaGGGGGCCTGGGCCTCATTCCCTGTGCACAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PPPWDEPQLPGL*GAWASFPVHSL Trigger: CAGGCTGTGCACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCCCATGGCGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 72 bp | GGATCCGGCTCTCCTCGCTGGAAGCAGAACTCAGGCTaGAGCTCGAGCTCGCGGCCACGCAGCTCCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: GSGSPRWKQNSG*SSSSRPRSSHS Trigger: GGAGTGGGAGCTGCGTGGCCGCGAGCTCGAGCTCCAGCCTGAGTTCTGCTTCCAGCGAGGAGAGCCGGATCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CCA 72 bp | GGCGCTGCAGGCAGGGCAGGCGTTCGGGTTCCTCGCTaGCCAGATCCAAGGGGCTGCTCTCATGGATCCGGT | + |
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Preference number: 3 (lower is better) Translates to: GAAGRAGVRVPR*PDPRGCSHGSG Trigger: ACCGGATCCATGAGAGCAGCCCCTTGGATCTGGCCAGCGAGGAACCCGAACGCCTGCCCTGCCTGCAGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 72 bp | GGGAGGGGGCGGGGATCTCCCTGGAGCAGCCTTCCATaGCTTTGGCCTCCAGGGCACCACCCTAGTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: GRGRGSPWSSLP*LWPPGHHPSGF Trigger: GAAACCACTAGGGTGGTGCCCTGGAGGCCAAAGGCATGGAAGGCTGCTCCAGGGAGATCCCCGCCCCCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR TCA 72 bp | CCAAGGGGCTGCTCTCATGGATCCGGTCCCTCCTGTTaGTGTCAGCCCCGTGGCGCACCAGCAGCTCAACCA | + |
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Preference number: 3 (lower is better) Translates to: PRGCSHGSGPSC*CQPRGAPAAQP Trigger: TGGTTGAGCTGCTGGTGCGCCACGGGGCTGACATCAACAGGAGGGACCGGATCCATGAGAGCAGCCCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 72 bp | TGGGTGTGGCATGAGCAGAGCTACCACCAACCACAGTaGCAGAGCCCTGACCACCACAGGACTGGGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: WVWHEQSYHQPQ*QSPDHHRTGQA Trigger: GGCCTGCCCAGTCCTGTGGTGGTCAGGGCTCTGGCACTGTGGTTGGTGGTAGCTCTGCTCATGCCACACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 72 bp | TGTGAAACACTGAGAGGGAGGGGGCGGGGATCTCCCTaGAGCAGCCTTCCATGCCTTTGGCCTCCAGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CETLRGRGRGSP*SSLPCLWPPGH Trigger: GTGCCCTGGAGGCCAAAGGCATGGAAGGCTGCTCCAGGGAGATCCCCGCCCCCTCCCTCTCAGTGTTTCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 72 bp | GGACTGGGCAGGCCTCTAACCCAGAAGACCAGCCTGTaGCCGCCTCAGTTCTGTCCCCAGCTCCTCAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GLGRPLTQKTSL*PPQFCPQLLKG Trigger: GCCTTTGAGGAGCTGGGGACAGAACTGAGGCGGCCACAGGCTGGTCTTCTGGGTTAGAGGCCTGCCCAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR TCA 72 bp | AACAGAAGGCACCAGCCCCGAGACCTGGGTGTGGCATaGGCAGAGCTACCACCAACCACAGTGCCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: NRRHQPRDLGVA*AELPPTTVPEP Trigger: GGGCTCTGGCACTGTGGTTGGTGGTAGCTCTGCTCATGCCACACCCAGGTCTCGGGGCTGGTGCCTTCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR GCA 72 bp | GATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATGTaGCTCCGCCATGGGACGAACCACAGCTGCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: DFWHWSWETPGM*LRHGTNHSCQG Trigger: GCCCTGGCAGCTGTGGTTCGTCCCATGGCGGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 72 bp | GGGCGGGGATCTCCCTGGAGCAGCCTTCCATGCCTTTaGCCTCCAGGGCACCACCCTAGTGGTTTCATAGCA | + |
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Preference number: 3 (lower is better) Translates to: GRGSPWSSLPCL*PPGHHPSGFIA Trigger: TGCTATGAAACCACTAGGGTGGTGCCCTGGAGGCCAAAGGCATGGAAGGCTGCTCCAGGGAGATCCCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR TCA 72 bp | AGAATGGAGAGTGAGCCTTCTGCTCCAGCAGCTCCGTaGGGACCAGGATCCGGCTCTCCTCGCTGGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RMESEPSAPAAP*GPGSGSPRWKQ Trigger: CTGCTTCCAGCGAGGAGAGCCGGATCCTGGTCCTCACGGAGCTGCTGGAGCAGAAGGCTCACTCTCCATTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 72 bp | CGCCTCAGTTCTGTCCCCAGCTCCTCAAAGGCATCATaGGACCCGAGGCGGCAGAATGAATGGGTAGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: RLSSVPSSSKAS*DPRRQNEWVGP Trigger: AGGCCCTACCCATTCATTCTGCCGCCTCGGGTCTCATGATGCCTTTGAGGAGCTGGGGACAGAACTGAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CCA 72 bp | TCATGGATCCGGTCCCTCCTGTTGATGTCAGCCCCGTaGCGCACCAGCAGCTCAACCATGTCAGGCTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SWIRSLLLMSAP*RTSSSTMSGWF Trigger: AAACCAGCCTGACATGGTTGAGCTGCTGGTGCGCCACGGGGCTGACATCAACAGGAGGGACCGGATCCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 72 bp | GGGTCAGGCCCAGCTCAGCCATCTTCAGCAACGCATTaGTCACGCCTTCCTGGTAGAATGGAGAGTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GSGPAQPSSATH*SRLPGRMESEP Trigger: AGGCTCACTCTCCATTCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGATGGCTGAGCTGGGCCTGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CCA 72 bp | CTTCAGCAACGCATTGCTCACGCCTTCCTGGTAGAATaGAGAGTGAGCCTTCTGCTCCAGCAGCTCCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: LQQRIAHAFLVE*RVSLLLQQLRE Trigger: CTCACGGAGCTGCTGGAGCAGAAGGCTCACTCTCCATTCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 72 bp | CTCCTCAAAGGCATCATGAGACCCGAGGCGGCAGAATaGATGGGTAGGGCCTTACTGAATGGCCCAGGATTT | + |
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Preference number: 3 (lower is better) Translates to: LLKGIMRPEAAE*MGRALLNGPGF Trigger: AAATCCTGGGCCATTCAGTAAGGCCCTACCCATTCATTCTGCCGCCTCGGGTCTCATGATGCCTTTGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR TCA 72 bp | TTGTGGATCTGCACACCATCGCTGCTGGCCAGGGCGTaGAGTAAAGCTGTCTTCCCATTCTTGTCAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LWICTPSLLARA*SKAVFPFLSAA Trigger: TGCAGCTGACAAGAATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR GCA 72 bp | GGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTaGTGGCCAGGGCGTGAAGTAAAGCTGTCTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GCFLCCGSAHHR*WPGREVKLSSH Trigger: ATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCCAGGAGGAGCCGGATGTTTTCTGTGTTGTGGATCTGCACACCATCGCTTTCTTGTCAGCTGCATaGACATCTGCTCCAAGATCC | + |
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Preference number: 3 (lower is better) Translates to: SLQEEPDVFCVVDLHTIAFLSAA*TSAPRS Trigger: GGATCTTGGAGCAGATGTCAATGCAGCTGACAAGAA...AGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCCTCCTGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 72 bp | GAAGTAAAGCTGTCTTCCCATTCTTGTCAGCTGCATTaGCATCTGCTCCAAGATCCAAGAGGCGCTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: EVKLSSHSCQLH*HLLQDPRGAAG Trigger: GCCTGCAGCGCCTCTTGGATCTTGGAGCAGATGTCAATGCAGCTGACAAGAATGGGAAGACAGCTTTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CCA 72 bp | TGTTTTCTGTGTTGTGGATCTGCACACCATCGCTGCTaGCCAGGGCGTGAAGTAAAGCTGTCTTCCCATTCT | + |
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Preference number: 3 (lower is better) Translates to: CFLCCGSAHHRC*PGREVKLSSHS Trigger: AGAATGGGAAGACAGCTTTACTTCACGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR TCA 72 bp | TATTTAATCATCTCTGCTCATTCCCAAAAGCCAAGCTaGCTGCGAAGATCTCGTGAGGGCTTGGCACTAGAG | + |
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Preference number: 3 (lower is better) Translates to: YLIISAHSQKPS*LRRSREGLALE Trigger: CTCTAGTGCCAAGCCCTCACGAGATCTTCGCAGTCAGCTTGGCTTTTGGGAATGAGCAGAGATGATTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CCA 90 bp | GGACGAACCACAGCTGCCAGGGCTCTGAGGGGCCTGGGCCTCATTCCCTGTGCATGCGTGAGGGACTCATaGGCCGGGCACTCGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GRTTAARALRGLGLIPCACVRDS*AGHSLG Trigger: CCCCAGCGAGTGCCCGGCCCATGAGTCCCTCACGCA...TGCACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| 3UTR CAA 72 bp | TCCAAGGGGCTGCTCTCATGGATCCGGTCCCTCCTGTaGATGTCAGCCCCGTGGCGCACCAGCAGCTCAACC | + |
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Preference number: 4 (lower is better) Translates to: SKGLLSWIRSLL*MSAPWRTSSST Trigger: GGTTGAGCTGCTGGTGCGCCACGGGGCTGACATCAACAGGAGGGACCGGATCCATGAGAGCAGCCCCTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| 3UTR CAA 72 bp | GCCCCTCCCTCCAGGAGGAGCCGGATGTTTTCTGTGTaGTGGATCTGCACACCATCGCTGCTGGCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: APPSRRSRMFSV*WICTPSLLARA Trigger: CGCCCTGGCCAGCAGCGATGGTGTGCAGATCCACAACACAGAAAACATCCGGCTCCTCCTGGAGGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
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| CDS-3UTR TCA 90 bp | ACCACCACAGGACTGGGCAGGCCTCTAACCCAGAAGACCAGCCTGTGGCCGCCTGGAAGCAGAAGCGGTTaGTCATCGGGGCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TTTGLGRPLTQKTSLWPPGSRSG*SSGPPP Trigger: AGGAGGAGGCCCCGATGATCAACCGCTTCTGCTTCC...AGGCGGCCACAGGCTGGTCTTCTGGGTTAGAGGCCTGCCCAGTCCTGTGGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR GCA 90 bp | TGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGCCATGGGACGAACCACCCAGATCCAAGGGGCTaGTCTCATGGATCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WHWSWETPGMCLRHGTNHPDPRG*SHGSGP Trigger: GGGACCGGATCCATGAGAGCAGCCCCTTGGATCTGG...GTGGTTCGTCCCATGGCGGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CCA 90 bp | TTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGCCATGGGACGAACCGTTCGGGTTCCTCGCTaGCCAGATCCAAGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGTGPGKPQACASAMGRTVRVPR*PDPRGC Trigger: GCAGCCCCTTGGATCTGGCCAGCGAGGAACCCGAAC...GGTTCGTCCCATGGCGGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTGTGGCATGAGCAGAGCTACCACCAACCACAGTGCCAGAGCCCTGACCACGGCCTGGATCTTCCCTaGCAGGCTACCCACTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WVWHEQSYHQPQCQSPDHGLDLP*QATHWV Trigger: CACCCAGTGGGTAGCCTGGCAGGGAAGATCCAGGCC...GTGGTCAGGGCTCTGGCACTGTGGTTGGTGGTAGCTCTGCTCATGCCACACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | ATGGGACGAACCACAGCTGCCAGGGCTCTGAGGGGCCTGGGCCTCATTCCCTGTCAGGGTCTTCGAAATTaGGGTTGGCCCCACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGRTTAARALRGLGLIPCQGLRN*GWPHSA Trigger: TGCAGAGTGGGGCCAACCTCAATTTCGAAGACCCTG...ACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGTCAGCTCCTAATACAGAGGGCAGCTGTATCCCATCTGCACTGGCCCGGGAGCTGGTCACCATaGGGTCCAGCACGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPGQLLIQRAAVSHLHWPGSWSP*GPARSQ Trigger: CTGAGACCGTGCTGGACCTCATGGTGACCAGCTCCC...GGGCCAGTGCAGATGGGATACAGCTGCCCTCTGTATTAGGAGCTGACCAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCGCCTCAGTTCTGTCCCCAGCTCCTCAAAGGCATCATGAGACCCGAGGCAAGGGCAGTGCTTTaGCCTTGGTGTCCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPQFCPQLLKGIMRPEARAVL*PWCPQA Trigger: GGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGC...CTCGGGTCTCATGATGCCTTTGAGGAGCTGGGGACAGAACTGAGGCGGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGAGGCGCTGCAGGCAGGGCAGGCGTTCGGGTTCCTCGCTGGCCAGATCGCGTCCACTAGGGGCTaGTACTCAAAGATGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQEALQAGQAFGFLAGQIASTRG*YSKMIL Trigger: CAGGATCATCTTTGAGTACCAGCCCCTAGTGGACGC...GATCTGGCCAGCGAGGAACCCGAACGCCTGCCCTGCCTGCAGCGCCTCTTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGCCCAGGATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCAGGTTGGCCCCACTCTaGAGAAGGACAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EWPRIFGTGPGKPQACASRLAPL*RRTAAA Trigger: GGCAGCTGCTGTCCTTCTGCAGAGTGGGGCCAACCT...GGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATCCTGGGCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCCGCCTCAGTTCTGTCCCCAGCTCCTCAAAGGCATCATGAGACCCGAGCTCTTGAGGCAGATGTaGGTGAGGGACTCATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWPPQFCPQLLKGIMRPELLRQM*VRDSWA Trigger: GGCCCATGAGTCCCTCACGCACATCTGCCTCAAGAG...CTCGGGTCTCATGATGCCTTTGAGGAGCTGGGGACAGAACTGAGGCGGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | ATGGGACGAACCACAGCTGCCAGGGCTCTGAGGGGCCTGGGCCTCATTCCCTGTAGCTGCATTGACATCTaGTCCAAGATCCAAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MGRTTAARALRGLGLIPCSCIDI*SKIQEA Trigger: CGCCTCTTGGATCTTGGAGCAGATGTCAATGCAGCT...ACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAGCTACCACCAACCACAGTGCCAGAGCCCTGACCACCACAGGACTGGGGCGTCCACTAGGGGCTaGTACTCAAAGATGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSYHQPQCQSPDHHRTGASTRG*YSKMIL Trigger: CAGGATCATCTTTGAGTACCAGCCCCTAGTGGACGC...CCCAGTCCTGTGGTGGTCAGGGCTCTGGCACTGTGGTTGGTGGTAGCTCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | GAATGGCCCAGGATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGCTGGTACTCAAAGATaGTCCTGCGGAAGCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWPRIFGTGPGKPQACASAGTQR*SCGSRA Trigger: TGCACGGCTTCCGCAGGATCATCTTTGAGTACCAGC...GGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATCCTGGGCCATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CCA 90 bp | AGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCCACCCTGGGACTTGCAGGCACAGCCGGATaGACACCCGGCACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSILRLVSGTPDHSTLGLAGTAG*TPGTGV Trigger: AACACCTGTGCCGGGTGTCCATCCGGCTGTGCCTGC...AAGTCCCAGGGTGGAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCAGCAAGAGCTGCGTaGCTTGGAAGCAGAAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: APHKSCCARDAFKQKAPAPARAA*LGSRSG Trigger: ACCGCTTCTGCTTCCAAGTCACGCAGCTCTTGCTGG...GGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | CATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCGAGATGCCTCAGGGAGGCATaGAGGGCCTGGATCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKSCCARDAFKQKAPAPRCLREA*RAWIFP Trigger: AGGGAAGATCCAGGCCCTTCATGCCTCCCTGAGGCA...TCTCGGGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | CATTATAGGTGCCAGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCAGATCCAAGAGGCGCTaGAGGCAGGGCAGGCGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HYRCQVYPQAGFRYPRSFRSKRR*RQGRRS Trigger: CGAACGCCTGCCCTGCCTGCAGCGCCTCTTGGATCT...GAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCTGGCACCTATAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR TCA 90 bp | CCATCTTCAGCAACGCATTGCTCACGCCTTCCTGGTAGAATGGAGAGTGAGCCTGCTGGTACTCAAAGATaGTCCTGCGGAAGCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSATHCSRLPGRMESEPAGTQR*SCGSRA Trigger: TGCACGGCTTCCGCAGGATCATCTTTGAGTACCAGC...AGGCTCACTCTCCATTCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129628.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTACTGAATGGCCCAGGATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATCTTCAGCAACGCATTaGTCACGCCTTCCTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTEWPRIFGTGPGKPQASSATH*SRLPGR Trigger: TCTACCAGGAAGGCGTGAGCAATGCGTTGCTGAAGA...TGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATCCTGGGCCATTCAGTAAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | CTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCGAGCCAGACCAACAGGATaGACCGTGCAGGGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LINPAVLVMPLNRRHQPRARPTG*TVQGAV Trigger: AACTGCTCCCTGCACGGTGCATCCTGTTGGTCTGGC...TCGGGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | CATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCGAGATCTGTGTTGTGGATCTaGACACCATCGCTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HKSCCARDAFKQKAPAPRSVLWI*TPSLLA Trigger: GGCCAGCAGCGATGGTGTGCAGATCCACAACACAGA...TCTCGGGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR GCA 90 bp | ATTATAGGTGCCAGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCCTGGGCCAGCAAGAGCTaGGTGACTTGGAAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIGARSILRLVSGTPDHSWASKS*VTWKQK Trigger: CTTCTGCTTCCAAGTCACGCAGCTCTTGCTGGCCCA...GGAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCTGGCACCTATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCAAGAGCTGCGTGACTTaGAAGCAGAAGCGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLINPAVLVMPLNRRHQPKSCVT*KQKRLI Trigger: GATCAACCGCTTCTGCTTCCAAGTCACGCAGCTCTT...GGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS TCA 90 bp | GCCACGGTCGCAGGCACAGCCGGATGGACACCCGGCACAGGTGTTTaGGAGGTGGCGGGTAGCTCTCGAGCTGCCTCAGGGAGGCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ATVAGTAGWTPGTGV*EVAGSSRAASGRHE Trigger: TTCATGCCTCCCTGAGGCAGCTCGAGAGCTACCCGCCACCTCTCAAACACCTGTGCCGGGTGTCCATCCGGCTGTGCCTGCGACCGTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS CCA 90 bp | TCGCAGGCACAGCCGGATGGACACCCGGCACAGGTGTTTGAGAGGTaGCGGGTAGCTCTCGAGCTGCCTCAGGGAGGCATGAAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQAQPDGHPAQVFER*RVALELPQGGMKGL Trigger: CAGGCCCTTCATGCCTCCCTGAGGCAGCTCGAGAGCTACCCGCCACCTCTCAAACACCTGTGCCGGGTGTCCATCCGGCTGTGCCTGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | AAGCAGAGGAGCGGGAAGTGCAGCTTGAAGCTCTTGAGGCAGATGTaGGTGAGGGACTCATGGGCCGGGCACTCGCTGGGGTCGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: KQRSGKCSLKLLRQM*VRDSWAGHSLGSAP Trigger: CGGTGCCGACCCCAGCGAGTGCCCGGCCCATGAGTCCCTCACGCACATCTGCCTCAAGAGCTTCAAGCTGCACTTCCCGCTCCTCTGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS CCA 90 bp | TCGCTGGAAGCAGAATCATCCAGGGGCTCCTGCCGCTCCAGATCCTaGATGCCCAGGGCGCCAAGGATGGCGTCCACTAGGGGCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLEAESSRGSCRSRS*MPRAPRMASTRGWY Trigger: GTACCAGCCCCTAGTGGACGCCATCCTTGGCGCCCTGGGCATCCAGGATCTGGAGCGGCAGGAGCCCCTGGATGATTCTGCTTCCAGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS CCA 90 bp | AAGTGCAGCTTGAAGCTCTTGAGGCAGATGTGCGTGAGGGACTCATaGGCCGGGCACTCGCTGGGGTCGGCACCGTGGGCCAGCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KCSLKLLRQMCVRDS*AGHSLGSAPWASKS Trigger: GCTCTTGCTGGCCCACGGTGCCGACCCCAGCGAGTGCCCGGCCCATGAGTCCCTCACGCACATCTGCCTCAAGAGCTTCAAGCTGCACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | GGACGAACCACAGCTGCCAGGGCTCTGAGGGGCCTGGGCCTCATTCCCTGTGCATGGAAGCAGAAGCGGTaGATCATCGGGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRTTAARALRGLGLIPCAWKQKR*IIGASS Trigger: GGAGGAGGCCCCGATGATCAACCGCTTCTGCTTCCA...TGCACAGGGAATGAGGCCCAGGCCCCTCAGAGCCCTGGCAGCTGTGGTTCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | GTGTGCACTGAGCAGGTACCACTTGAGCCTGTCGGGCAAGGGCAGTaGTTTGACCTTGGTGTCCACAGGCCACGGTCGCAGGCACAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VCTEQVPLEPVGQGQ*FDLGVHRPRSQAQP Trigger: CGGCTGTGCCTGCGACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTGGTACCTGCTCAGTGCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | TGGAAGCAGAATCATCCAGGGGCTCCTGCCGCTCCAGATCCTGGATaGCCAGGGCGCCAAGGATGGCGTCCACTAGGGGCTGGTACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WKQNHPGAPAAPDPG*PGRQGWRPLGAGTQ Trigger: TTGAGTACCAGCCCCTAGTGGACGCCATCCTTGGCGCCCTGGGCATCCAGGATCTGGAGCGGCAGGAGCCCCTGGATGATTCTGCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | CTCTGGGAGCTGGTCACCATGAGGTCCAGCACGGTCTCAGCCTTATaGAGAAGCTCAATGTGGCTGTCGTCCTCGGCACAGCCCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWELVTMRSSTVSAL*RSSMWLSSSAQPGC Trigger: GCACCCGGGCTGTGCCGAGGACGACAGCCACATTGAGCTTCTGCATAAGGCTGAGACCGTGCTGGACCTCATGGTGACCAGCTCCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | GCTCTCGAGCTGCCTCAGGGAGGCATGAAGGGCCTGGATCTTCCCTaGCAGGCTACCCACTGGGTGGATGTTGAGGTTCTCAGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALELPQGGMKGLDLP*QATHWVDVEVLRQL Trigger: CAGCTGCCTGAGAACCTCAACATCCACCCAGTGGGTAGCCTGGCAGGGAAGATCCAGGCCCTTCATGCCTCCCTGAGGCAGCTCGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | GAATGGCCCAGGATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCTCCTTGGTGGTGGCCTaGACGTCTGCCCCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EWPRIFGTGPGKPQACASSLVVA*TSAPPS Trigger: GGAGGGAGGGGCAGACGTCAAGGCCACCACCAAGGA...GGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATCCTGGGCCATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGCTACCACCAACCACAGTGCCAGAGCCCTGACCACCACAGGACTGGGCGGCAGTGCTTTGACCTaGGTGTCCACAGGCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRATTNHSARALTTTGLGGSALT*VSTGHG Trigger: ACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCC...GCCCAGTCCTGTGGTGGTCAGGGCTCTGGCACTGTGGTTGGTGGTAGCTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS TCA 90 bp | CCTCGGCACAGCCCGGGTGCGAGCAGAGCCTCTCAAAAACGAGGTTaGAGCCAGACCAACAGGATGCACCGTGCAGGGAGCAGTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRHSPGASRASQKRG*SQTNRMHRAGSSCR Trigger: CCTACAACTGCTCCCTGCACGGTGCATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCGCACCCGGGCTGTGCCGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS CCA 90 bp | ACCATGAGGTCCAGCACGGTCTCAGCCTTATGCAGAAGCTCAATGTaGCTGTCGTCCTCGGCACAGCCCGGGTGCGAGCAGAGCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TMRSSTVSALCRSSM*LSSSAQPGCEQSLS Trigger: TGAGAGGCTCTGCTCGCACCCGGGCTGTGCCGAGGACGACAGCCACATTGAGCTTCTGCATAAGGCTGAGACCGTGCTGGACCTCATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | CGAGCAGAGCCTCTCAAAAACGAGGTTGAAGCCAGACCAACAGGATaGACCGTGCAGGGAGCAGTTGTAGGCGGCTCCGGACTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAEPLKNEVEARPTG*TVQGAVVGGSGLQQ Trigger: CTGCTGGAGTCCGGAGCCGCCTACAACTGCTCCCTGCACGGTGCATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS CCA 90 bp | CTACCCACTGGGTGGATGTTGAGGTTCTCAGGCAGCTGCAGCCTCTaGGAGCTGGTCACCATGAGGTCCAGCACGGTCTCAGCCTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTGWMLRFSGSCSL*ELVTMRSSTVSALC Trigger: GCATAAGGCTGAGACCGTGCTGGACCTCATGGTGACCAGCTCCCAGAGGCTGCAGCTGCCTGAGAACCTCAACATCCACCCAGTGGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | GAATGGCCCAGGATTTTTGGCACTGGTCCTGGGAAACCCCAGGCATGTGCCTCCGGCAAGGGCAGTGCTTaGACCTTGGTGTCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EWPRIFGTGPGKPQACASGKGSA*TLVSTG Trigger: GCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCC...GGAGGCACATGCCTGGGGTTTCCCAGGACCAGTGCCAAAAATCCTGGGCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | GCCTGGTCAGCTCCTAATACAGAGGGCAGCTGTATCCCATCTGCACTGGCCCCTACAGTGTCCCCATCCTaGGTGGTGGCCTTGACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWSAPNTEGSCIPSALAPTVSPS*VVALTS Trigger: AGACGTCAAGGCCACCACCAAGGATGGGGACACTGT...AGGGGCCAGTGCAGATGGGATACAGCTGCCCTCTGTATTAGGAGCTGACCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS TCA 90 bp | CTTCCTGGTAGAATGGAGAGTGAGCCTTCTGCTCCAGCAGCTCCGTaGGGACCAGGATCCGGCTCTCCTCGCTGGAAGCAGAATCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGRMESEPSAPAAP*GPGSGSPRWKQNHP Trigger: TGGATGATTCTGCTTCCAGCGAGGAGAGCCGGATCCTGGTCCTCACGGAGCTGCTGGAGCAGAAGGCTCACTCTCCATTCTACCAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | GCAGGTGAATACAGTGTCCCCATCCTTGGTGGTGGCCTTGACGTCTaGCCCTCCCTCCAGGAGGAGCCGGATGTTTTCTGTGTTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGEYSVPILGGGLDV*PSLQEEPDVFCVVD Trigger: ATCCACAACACAGAAAACATCCGGCTCCTCCTGGAGGGAGGGGCAGACGTCAAGGCCACCACCAAGGATGGGGACACTGTATTCACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS GCA 90 bp | TTATGCAGAAGCTCAATGTGGCTGTCGTCCTCGGCACAGCCCGGGTaGGAGCAGAGCCTCTCAAAAACGAGGTTGAAGCCAGACCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LCRSSMWLSSSAQPG*EQSLSKTRLKPDQQ Trigger: CTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCGCACCCGGGCTGTGCCGAGGACGACAGCCACATTGAGCTTCTGCATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCATTATAGGTGCCAGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGACTGAGCAGGTACCACTaGAGCCTGTCGGGCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGHYRCQVYPQAGFRYPRLSRYH*SLSGKG Trigger: GCCCTTGCCCGACAGGCTCAAGTGGTACCTGCTCAG...TCTGGGGTACCTGAAACCAGCCTGAGGATAGACCTGGCACCTATAATGGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCATTATAGGTGCCAGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGACCCACTGGGTGGATGTaGAGGTTCTCAGGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGHYRCQVYPQAGFRYPRPTGWM*RFSGSC Trigger: GCAGCTGCCTGAGAACCTCAACATCCACCCAGTGGG...TCTGGGGTACCTGAAACCAGCCTGAGGATAGACCTGGCACCTATAATGGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
||
| CDS-3UTR CAA 90 bp | AGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCCACCCTGGGACTTACAGGGTCTTCGAAATaGAGGTTGGCCCCACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: RSILRLVSGTPDHSTLGLTGSSK*RLAPLC Trigger: GCAGAGTGGGGCCAACCTCAATTTCGAAGACCCTGT...AAGTCCCAGGGTGGAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CAA 90 bp | AGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCCACCCTGGGACTTAGCGGGAAGTGCAGCTaGAAGCTCTTGAGGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: RSILRLVSGTPDHSTLGLSGKCS*KLLRQM Trigger: CATCTGCCTCAAGAGCTTCAAGCTGCACTTCCCGCT...AAGTCCCAGGGTGGAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CAA 90 bp | AGGTCTATCCTCAGGCTGGTTTCAGGTACCCCAGATCATTCCACCCTGGGACTTCAAGAGCTGCGTGACTaGGAAGCAGAAGCGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: RSILRLVSGTPDHSTLGLQELRD*EAEAVD Trigger: ATCAACCGCTTCTGCTTCCAAGTCACGCAGCTCTTG...AAGTCCCAGGGTGGAATGATCTGGGGTACCTGAAACCAGCCTGAGGATAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CAA 90 bp | CTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCGATGCAGCTTGAAGCTCTaGAGGCAGATGTGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LINPAVLVMPLNRRHQPRCSLKL*RQMCVR Trigger: CCTCACGCACATCTGCCTCAAGAGCTTCAAGCTGCA...TCGGGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCTTCTTGTCAGCTGCATaGACATCTGCTCCAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: PLINPAVLVMPLNRRHQPFLSAA*TSAPRS Trigger: GGATCTTGGAGCAGATGTCAATGCAGCTGACAAGAA...GGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS-3UTR CAA 90 bp | CATAAATCCTGCTGTGCTCGTGATGCCTTTAAACAGAAGGCACCAGCCCCGAGACTCTCAAAAACGAGGTaGAAGCCAGACCAACAGGAT | + |
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Preference number: 5 (lower is better) Translates to: HKSCCARDAFKQKAPAPRLSKTR*KPDQQD Trigger: ATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAG...TCTCGGGGCTGGTGCCTTCTGTTTAAAGGCATCACGAGCACAGCAGGATTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS TCA 72 bp | GCAGGCACAGCCGGATGGACACCCGGCACAGGTGTTTaGGAGGTGGCGGGTAGCTCTCGAGCTGCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AGTAGWTPGTGV*EVAGSSRAASG Trigger: CCCTGAGGCAGCTCGAGAGCTACCCGCCACCTCTCAAACACCTGTGCCGGGTGTCCATCCGGCTGTGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CCA 72 bp | GACTCATGGGCCGGGCACTCGCTGGGGTCGGCACCGTaGGCCAGCAAGAGCTGCGTGACTTGGAAGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DSWAGHSLGSAP*ASKSCVTWKQK Trigger: CTTCTGCTTCCAAGTCACGCAGCTCTTGCTGGCCCACGGTGCCGACCCCAGCGAGTGCCCGGCCCATGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | CTCTCCTCGCTGGAAGCAGAATCATCCAGGGGCTCCTaGCGCTCCAGATCCTGGATGCCCAGGGCGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSLEAESSRGS*RSRSWMPRAPR Trigger: CCTTGGCGCCCTGGGCATCCAGGATCTGGAGCGGCAGGAGCCCCTGGATGATTCTGCTTCCAGCGAGGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CCA 72 bp | GGGTCGGCACCGTGGGCCAGCAAGAGCTGCGTGACTTaGAAGCAGAAGCGGTTGATCATCGGGGCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSAPWASKSCVT*KQKRLIIGASS Trigger: GGAGGAGGCCCCGATGATCAACCGCTTCTGCTTCCAAGTCACGCAGCTCTTGCTGGCCCACGGTGCCGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CCA 72 bp | CAGCCGGATGGACACCCGGCACAGGTGTTTGAGAGGTaGCGGGTAGCTCTCGAGCTGCCTCAGGGAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: QPDGHPAQVFER*RVALELPQGGM Trigger: CATGCCTCCCTGAGGCAGCTCGAGAGCTACCCGCCACCTCTCAAACACCTGTGCCGGGTGTCCATCCGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CAA 72 bp | CACTTGAGCCTGTCGGGCAAGGGCAGTGCTTTGACCTaGGTGTCCACAGGCCACGGTCGCAGGCACAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: HLSLSGKGSALT*VSTGHGRRHSR Trigger: CCGGCTGTGCCTGCGACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CAA 90 bp | AGCAGGTACCACTTGAGCCTGTCGGGCAAGGGCAGTGCTTTGACCTaGGTGTCCACAGGCCACGGTCGCAGGCACAGCCGGATGGACACC | + |
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Preference number: 6 (lower is better) Translates to: SRYHLSLSGKGSALT*VSTGHGRRHSRMDT Trigger: GGTGTCCATCCGGCTGTGCCTGCGACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTGGTACCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CAA 90 bp | GCACTGAGCAGGTACCACTTGAGCCTGTCGGGCAAGGGCAGTGCTTaGACCTTGGTGTCCACAGGCCACGGTCGCAGGCACAGCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: ALSRYHLSLSGKGSA*TLVSTGHGRRHSRM Trigger: CATCCGGCTGTGCCTGCGACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTGGTACCTGCTCAGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | GAGCAGGTACCACTTGAGCCTGTCGGGCAAGGGCAGTaGTTTGACCTTGGTGTCCACAGGCCACGGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: EQVPLEPVGQGQ*FDLGVHRPRSQ Trigger: CTGCGACCGTGGCCTGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTGGTACCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS TCA 72 bp | AGCCCGGGTGCGAGCAGAGCCTCTCAAAAACGAGGTTaGAGCCAGACCAACAGGATGCACCGTGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGASRASQKRG*SQTNRMHRAGS Trigger: GCTCCCTGCACGGTGCATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCGCACCCGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | CTGCCTCAGGGAGGCATGAAGGGCCTGGATCTTCCCTaGCAGGCTACCCACTGGGTGGATGTTGAGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPQGGMKGLDLP*QATHWVDVEVL Trigger: GAGAACCTCAACATCCACCCAGTGGGTAGCCTGGCAGGGAAGATCCAGGCCCTTCATGCCTCCCTGAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CCA 72 bp | ATGCCCAGGGCGCCAAGGATGGCGTCCACTAGGGGCTaGTACTCAAAGATGATCCTGCGGAAGCCGTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: MPRAPRMASTRG*YSKMILRKPCK Trigger: CTTGCACGGCTTCCGCAGGATCATCTTTGAGTACCAGCCCCTAGTGGACGCCATCCTTGGCGCCCTGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041726.4 ENSMUST00000129628.8 |
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| CDS CAA 72 bp | CAGCCCGGGTGCGAGCAGAGCCTCTCAAAAACGAGGTaGAAGCCAGACCAACAGGATGCACCGTGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QPGCEQSLSKTR*KPDQQDAPCRE Trigger: CTCCCTGCACGGTGCATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCGCACCCGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | TACAGTGTCCCCATCCTTGGTGGTGGCCTTGACGTCTaGCCCTCCCTCCAGGAGGAGCCGGATGTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: YSVPILGGGLDV*PSLQEEPDVFC Trigger: ACAGAAAACATCCGGCTCCTCCTGGAGGGAGGGGCAGACGTCAAGGCCACCACCAAGGATGGGGACACTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | AGCTCAATGTGGCTGTCGTCCTCGGCACAGCCCGGGTaGGAGCAGAGCCTCTCAAAAACGAGGTTGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSMWLSSSAQPG*EQSLSKTRLKP Trigger: TGGCTTCAACCTCGTTTTTGAGAGGCTCTGCTCGCACCCGGGCTGTGCCGAGGACGACAGCCACATTGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CAA 90 bp | TGCGTGACTTGGAAGCAGAAGCGGTTGATCATCGGGGCCTCCTCCTaGTCCCCACAGACAGTCTCACCGAGCAGGAAGATGATGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CVTWKQKRLIIGASS*SPQTVSPSRKMMQV Trigger: CACCTGCATCATCTTCCTGCTCGGTGAGACTGTCTGTGGGGACAAGGAGGAGGCCCCGATGATCAACCGCTTCTGCTTCCAAGTCACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | CCTCTCAAAAACGAGGTTGAAGCCAGACCAACAGGATaGACCGTGCAGGGAGCAGTTGTAGGCGGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PLKNEVEARPTG*TVQGAVVGGSG Trigger: TCCGGAGCCGCCTACAACTGCTCCCTGCACGGTGCATCCTGTTGGTCTGGCTTCAACCTCGTTTTTGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS GCA 72 bp | CTGGTCACCATGAGGTCCAGCACGGTCTCAGCCTTATaGAGAAGCTCAATGTGGCTGTCGTCCTCGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: LVTMRSSTVSAL*RSSMWLSSSAQ Trigger: CTGTGCCGAGGACGACAGCCACATTGAGCTTCTGCATAAGGCTGAGACCGTGCTGGACCTCATGGTGACCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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| CDS CAA 90 bp | CAGCAAGTGTCTTGGGTATCACTGTGTGCACTGAGCAGGTACCACTaGAGCCTGTCGGGCAAGGGCAGTGCTTTGACCTTGGTGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: QQVSWVSLCALSRYH*SLSGKGSALTLVST Trigger: TGTGGACACCAAGGTCAAAGCACTGCCCTTGCCCGACAGGCTCAAGTGGTACCTGCTCAGTGCACACAGTGATACCCAAGACACTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041726.4 |
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