Pregenerated sensors for ASB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042607Ensembl transcript IDs: ENSMUST00000043294.12, ENSMUST00000183358.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAGAACATCCGACAGGAAGCAAGAAGCAACGCCACAGAGAAATaGAAGGAGTCTGCCCACAGCGGTACAGTGTCTACACGTCACTAC | + |
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Preference number: 1 (lower is better) Translates to: QENIRQEARSNATEK*KESAHSGTVSTRHY Trigger: GTAGTGACGTGTAGACACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCTTCCTGTCGGATGTTCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR TCA 90 bp | CTGAAGACGCACAGGAAATTACGGAGCCCAGTCCTAGACTCATGCTaGACGTGTCTAGCTTGCCTTTTCTGTTGTCTCCAACTCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LKTHRKLRSPVLDSC*TCLACLFCCLQLSE Trigger: TTCAGAGAGTTGGAGACAACAGAAAAGGCAAGCTAGACACGTTCAGCATGAGTCTAGGACTGGGCTCCGTAATTTCCTGTGCGTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| 3UTR TCA 90 bp | CGCACTTCAAGTCAGAGCACACTTCAGAAAGTTAAGCAGTACATATaGGTTTGCACCTGTACTCCTGCCCCATCACTTCATACAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RTSSQSTLQKVKQYI*VCTCTPAPSLHTAV Trigger: GACTGCTGTATGAAGTGATGGGGCAGGAGTACAGGTGCAAACTCATATGTACTGCTTAACTTTCTGAAGTGTGCTCTGACTTGAAGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR GCA 90 bp | TGGCTCAGTGTGTTGAAATGTCTATTCCTAGGCTATAAAGTAAACTaGTCTTCCCTTCTTTTTCTATCTAGACTCAAAGATCTTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: WLSVLKCLFLGYKVN*SSLLFLSRLKDLVP Trigger: GGGAACAAGATCTTTGAGTCTAGATAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCCTAGGAATAGACATTTCAACACACTGAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGAAGCAACGCCACAGAGAAATGAAAGGAGTCTGCCCACAGCGGTACAGTCCCACTGTACTCCTGTaGATTTGTCACCAAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SKKQRHREMKGVCPQRYSPTVLL*ICHQKE Trigger: CTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGG...ACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGAACGCCACAGAGAAATaGAAGGAGTCTGCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: PVINQSSTDFSARMFLVMNATEK*KESAHS Trigger: GCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTT...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR CCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGGCGGCCTCCAGTGTCTaGCTCAGTGTGTTGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: HQIHERVHLHKTGSKRVSAASSV*LSVLKC Trigger: ACATTTCAACACACTGAGCCAGACACTGGAGGCCGC...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGAAGCAACGCCACAGAGAAATGAAAGGAGTCTGCCCACAGCGGTACAGTTCTTTCTCGTCTACATaGGAGCTGGAGTGTAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SKKQRHREMKGVCPQRYSSFSST*ELECRI Trigger: TATTCTACACTCCAGCTCTCATGTAGACGAGAAAGA...ACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR GCA 90 bp | ACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCGGGACCATTTTATCCATaGAAACTGCGTCTACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TYTKLGVRGSRFTNTATSGPFYP*KLRLPS Trigger: ACTGGGTAGACGCAGTTTGCATGGATAAAATGGTCC...CGATGTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGTCACTGAGAACCAAATaGGGAAAACAAAGTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PVINQSSTDFSARMFLVMSLRTK*GKQSSP Trigger: TGGAGAACTTTGTTTTCCTCATTTGGTTCTCAGTGA...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR TCA 90 bp | ATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGATCCAACAGTGATCACTaGGAACCAAATGAGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: IKYMNVSTYTKLGVRGSRSNSDH*EPNEEN Trigger: GTTTTCCTCATTTGGTTCTCAGTGATCACTGTTGGA...TCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR GCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGCTAAACAGTACTCCGTaGTTTGTCTTCATGGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: HQIHERVHLHKTGSKRVSLNSTP*FVFMVK Trigger: TTTAACCATGAAGACAAAGCACGGAGTACTGTTTAG...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR CAA 90 bp | GTGGGAGACACCAAGCTTAAGCGGTCACTCACAAAACCTGCTACATaGCAAACGAAACAATCATGTAAACGTATTACTGATAATGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VGDTKLKRSLTKPAT*QTKQSCKRITDNVV Trigger: CACTACATTATCAGTAATACGTTTACATGATTGTTTCGTTTGCAATGTAGCAGGTTTTGTGAGTGACCGCTTAAGCTTGGTGTCTCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR GCA 90 bp | ACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCGGGCTATAAAGTAAACTaGTCTTCCCTTCTTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TYTKLGVRGSRFTNTATSGYKVN*SSLLFL Trigger: TAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCC...CGATGTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCTATTCCTAGGCTATAAAGTAAACTGCTCTTCCCTTCTTTTTCTATCTAGATGTCACCAAAAGGAGTaGATGACTTTGATTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLFLGYKVNCSSLLFLSRCHQKE*MTLIWG Trigger: TCCCCAAATCAAAGTCATCCACTCCTTTTGGTGACA...TCTAGATAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCCTAGGAATAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR CCA 72 bp | TTCAACCCTGGAGGTCCATCTGCGGCCTCCAGTGTCTaGCTCAGTGTGTTGAAATGTCTATTCCTAGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: FNPGGPSAASSV*LSVLKCLFLGY Trigger: ATAGCCTAGGAATAGACATTTCAACACACTGAGCCAGACACTGGAGGCCGCAGATGGACCTCCAGGGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR TCA 72 bp | AGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTaGTGGAGAGAAGCCCCCAACCCTTTGAATATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPAQTFLPECSW*WREAPNPLNIL Trigger: CAGAATATTCAAAGGGTTGGGGGCTTCTCTCCATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR GCA 72 bp | TACACCTGTGATAAATCAGTCCAGCACAGACTTTTCTaGCAGAATGTTCCTGGTGATGGAGAGAAGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: YTCDKSVQHRLF*QNVPGDGEKPP Trigger: TGGGGGCTTCTCTCCATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR TCA 72 bp | AGTCAGAGCACACTTCAGAAAGTTAAGCAGTACATATaGGTTTGCACCTGTACTCCTGCCCCATCACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SQSTLQKVKQYI*VCTCTPAPSLH Trigger: ATGAAGTGATGGGGCAGGAGTACAGGTGCAAACTCATATGTACTGCTTAACTTTCTGAAGTGTGCTCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR GCA 72 bp | TGGAAGTTCAGGTGTACAGTTTACAAACTGTGTGGTTaGCAGATTGTTCTGAAGACGCACAGGAAATTACGG | + |
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Preference number: 3 (lower is better) Translates to: WKFRCTVYKLCG*QIVLKTHRKLR Trigger: CCGTAATTTCCTGTGCGTCTTCAGAACAATCTGGCAACCACACAGTTTGTAAACTGTACACCTGAACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| 3UTR GCA 72 bp | TCTAGACTCAAAGATCTTGTTCCCACTGTACTCCTGTaGATTTGTCACCAAAAGGAGTGGATGACTTTGATT | + |
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Preference number: 3 (lower is better) Translates to: SRLKDLVPTVLL*ICHQKEWMTLI Trigger: AATCAAAGTCATCCACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAGTCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR CCA 72 bp | AGTTTGGAAGTTCAGGTGTACAGTTTACAAACTGTGTaGTTGCCAGATTGTTCTGAAGACGCACAGGAAATT | + |
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Preference number: 3 (lower is better) Translates to: SLEVQVYSLQTV*LPDCSEDAQEI Trigger: AATTTCCTGTGCGTCTTCAGAACAATCTGGCAACCACACAGTTTGTAAACTGTACACCTGAACTTCCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| 3UTR GCA 72 bp | AGGACAAGGTACAGAAATAATCACATTAAACACATGTaGAAGCAATTCAAAACAAGTGGCTACATATTCCAC | + |
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Preference number: 3 (lower is better) Translates to: RTRYRNNHIKHM*KQFKTSGYIFH Trigger: GTGGAATATGTAGCCACTTGTTTTGAATTGCTTGCACATGTGTTTAATGTGATTATTTCTGTACCTTGTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR GCA 72 bp | GTGTTGAAATGTCTATTCCTAGGCTATAAAGTAAACTaGTCTTCCCTTCTTTTTCTATCTAGACTCAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: VLKCLFLGYKVN*SSLLFLSRLKD Trigger: ATCTTTGAGTCTAGATAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCCTAGGAATAGACATTTCAACAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | AGCAAGAAGCAACGCCACAGAGAAATGAAAGGAGTCTGCCCACAGCGGTACAGTTGTACTCCTGCTCCTTaGAGCGCAGGGCCCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SKKQRHREMKGVCPQRYSCTPAP*SAGPSR Trigger: CCTACTGGGCCCTGCGCTTCAAGGAGCAGGAGTACA...ACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGTCAGAGAGGCCGAAGTaGGCCGCCGTGTGCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HQIHERVHLHKTGSKRVSSERPK*AAVCRG Trigger: ACCCCTGCACACGGCGGCCCACTTCGGCCTCTCTGA...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | CTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTGGCAGGACGCACGGAGGTaGCCTTCAGCACGTACTGGA | + |
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Preference number: 4 (lower is better) Translates to: LKDLVPTVLLCICHQKEWQDARR*PSARTG Trigger: TCCAGTACGTGCTGAAGGTCACCTCCGTGCGTCCTG...CCACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGTCCCTGCTGTACTCCTaGTCCTTGAAGCGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HQIHERVHLHKTGSKRVSSLLYS*SLKRRA Trigger: GGCCCTGCGCTTCAAGGAGCAGGAGTACAGCAGGGA...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGGCAGATCTCAGGCTGTaGAGCAGGACGCACGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMADLRL*SRTHGG Trigger: ACCTCCGTGCGTCCTGCTGCACAGCCTGAGATCTGC...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGGGTGGCAATGGCCAGTaGGGTCTCCATGTGGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: HQIHERVHLHKTGSKRVSGGNGQ*GLHVGV Trigger: AACGCCCACATGGAGACCCCACTGGCCATTGCCACC...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCACAGATGCAGGCCTGTaGCCCAGGAAGACTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSTDAGL*PRKTSA Trigger: AGCTGAAGTCTTCCTGGGCCACAGGCCTGCATCTGT...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CCA 90 bp | ATGTTCCTGGTGATGGAGAGAAGCCCCCAACCCTTTGAATATTCTGAAATATGTGCAGGGCCCAGTAGGTaGCAATGGCCAGTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: MFLVMERSPQPFEYSEICAGPSR*QWPVGS Trigger: AGACCCCACTGGCCATTGCCACCTACTGGGCCCTGC...ACATATTTCAGAATATTCAAAGGGTTGGGGGCTTCTCTCCATCACCAGGAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | AGCAAGAAGCAACGCCACAGAGAAATGAAAGGAGTCTGCCCACAGCGGTACAGTCAAGAGTGGCAAGCCTaGATCACCTTGTGGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: SKKQRHREMKGVCPQRYSQEWQA*ITLWNC Trigger: ACAGTTCCACAAGGTGATCCAGGCTTGCCACTCTTG...ACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | GTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACCCAGCATCATGTGCATaGGCACGTGGTCGCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: VHLHKTGSKRVSIYKHSYPASCA*ARGRNS Trigger: GGAATTGCGACCACGTGCTCATGCACATGATGCTGG...GTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGAGTGGGGTCTCCATGTaGGCGTTCATGCTATCCACG | + |
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Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMSGVSM*AFMLST Trigger: CGTGGATAGCATGAACGCCCACATGGAGACCCCACT...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | ATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGACCCAGTAGGTGGCAATaGCCAGTGGGGTCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: IKYMNVSTYTKLGVRGSRPSRWQ*PVGSPC Trigger: ACATGGAGACCCCACTGGCCATTGCCACCTACTGGG...TCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | ATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGAGTGCGGCAGATGAGGTaGTGTTCCCTGCTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: IKYMNVSTYTKLGVRGSRVRQMR*CSLLYS Trigger: GGAGTACAGCAGGGAACACCACCTCATCTGCCGCAC...TCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGGCTTTCGGGCAAGAGTaGCAAGCCTGGATCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMAFGQE*QAWITL Trigger: CAAGGTGATCCAGGCTTGCCACTCTTGCCCGAAAGC...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | CTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTGGATTTCACAAGCCACGTaGAGAGGGGTCTTCCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LKDLVPTVLLCICHQKEWISQAT*RGVFPL Trigger: CAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAAT...CCACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | ACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCGGCCTCCAGCATCATGTaGATGAGCACGTGGTCGCAA | + |
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Preference number: 4 (lower is better) Translates to: TYTKLGVRGSRFTNTATSASSIM*MSTWSQ Trigger: TTGCGACCACGTGCTCATGCACATGATGCTGGAGGC...CGATGTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | ACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCGATGTGCATGAGCACGTaGTCGCAATTCCAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TYTKLGVRGSRFTNTATSMCMST*SQFQAA Trigger: GGCTGCCTGGAATTGCGACCACGTGCTCATGCACAT...CGATGTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGCTTCTTCAACGGCAGTaGGAGGGACAGCATAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMLLQRQ*EGQHRD Trigger: ATCCCTATGCTGTCCCTCCCACTGCCGTTGAAGAAG...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR CAA 72 bp | GGTCCATCTGCGGCCTCCAGTGTCTGGCTCAGTGTGTaGAAATGTCTATTCCTAGGCTATAAAGTAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GPSAASSVWLSV*KCLFLGYKVNC Trigger: GCAGTTTACTTTATAGCCTAGGAATAGACATTTCAACACACTGAGCCAGACACTGGAGGCCGCAGATGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCATCAGGCACTCCACATaGCCAAGCAAAACTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSIRHST*PSKTDR Trigger: TCTGTCAGTTTTGCTTGGTCATGTGGAGTGCCTGAT...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CCA 90 bp | ATGTTCCTGGTGATGGAGAGAAGCCCCCAACCCTTTGAATATTCTGAAATATGTACAGATGCAGGCCTGTaGCCCAGGAAGACTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: MFLVMERSPQPFEYSEICTDAGL*PRKTSA Trigger: AGCTGAAGTCTTCCTGGGCCACAGGCCTGCATCTGT...ACATATTTCAGAATATTCAAAGGGTTGGGGGCTTCTCTCCATCACCAGGAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | GTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCAGGCACTCCACATaGCCAAGCAAAACTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: VHLHKTGSKRVSIYKHSYIRHST*PSKTDR Trigger: TCTGTCAGTTTTGCTTGGTCATGTGGAGTGCCTGAT...GTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | AGCAAGAAGCAACGCCACAGAGAAATGAAAGGAGTCTGCCCACAGCGGTACAGTGTGTCCACATCTATTTaGCTCTCGATTAAAATAGCC | + |
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Preference number: 4 (lower is better) Translates to: SKKQRHREMKGVCPQRYSVSTSI*LSIKIA Trigger: GGCTATTTTAATCGAGAGGCAAATAGATGTGGACAC...ACTGTACCGCTGTGGGCAGACTCCTTTCATTTCTCTGTGGCGTTGCTTCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR TCA 90 bp | GACTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTTGTGTAGAGGGGACTTaGAATCATCATCACGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSKILFPLYSCAFVTKRSCVEGT*NHHHER Trigger: ACGCTCGTGATGATGATTTCAAGTCCCCTCTACACA...ACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | GACTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTTTGATGGTAGCATTGTaGTCCAGCAGTACCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKILFPLYSCAFVTKRSLMVAL*SSSTIR Trigger: CCTGATGGTACTGCTGGACCACAATGCTACCATCAA...ACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGATAGGGATTGCTTTGTaGCATCTGTTGTGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQIHERVHLHKTGSKRVSIGIAL*HLLCSA Trigger: AGCGCTACACAACAGATGCCACAAAGCAATCCCTAT...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCGTGTCCACATCTATTTaGCTCTCGATTAAAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSVSTSI*LSIKIA Trigger: GGCTATTTTAATCGAGAGGCAAATAGATGTGGACAC...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CCA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCACTTCAGCTTATAACTaGGCAACCAATAGCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSTSAYN*ATNSLV Trigger: AACAAGGCTATTGGTTGCCCAGTTATAAGCTGAAGT...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGGTAAATGATTCCCTCTaGCTCCAAAAGCAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMVNDSL*LQKQVL Trigger: AAGTACCTGCTTTTGGAGCCAGAGGGAATCATTTAC...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| 3UTR CAA 72 bp | ACTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTaGTCACCAAAAGGAGTGGATGACTTTGATTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQRSCSHCTPVH*SPKGVDDFDLG Trigger: CCCCAAATCAAAGTCATCCACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR GCA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCGCCTTGTTTGTAAGATaGCAAAATCATGTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSALFVR*QNHVLI Trigger: GATGAGAACATGATTTTGGCATCTTACAAACAAGGC...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTGTATGTTGTCACATGAGCTACTATAATAGTATCTGCCTTCTAAATGTAGTTGGCCTCAGCTCCTaGCTCCAGCATCATGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTVCCHMSYYNSICLLNVVGLSS*LQHHVH Trigger: ATGCACATGATGCTGGAGGCAGGAGCTGAGGCCAAC...TACATTTAGAAGGCAGATACTATTATAGTAGCTCATGTGACAACATACAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGACTTCAGCTTATAACTaGGCAACCAATAGCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQIHERVHLHKTGSKRVSTSAYN*ATNSLV Trigger: AACAAGGCTATTGGTTGCCCAGTTATAAGCTGAAGT...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | CTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTGGGGTGTCTCTTCATCCTaGTTGTTGGTTTTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDLVPTVLLCICHQKEWGVSSS*LLVFMF Trigger: AAACATGAAAACCAACAACCAGGATGAAGAGACACC...CCACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
||
| 3UTR CAA 72 bp | TTGGAAGTTCAGGTGTACAGTTTACAAACTGTGTGGTaGCCAGATTGTTCTGAAGACGCACAGGAAATTACG | + |
|
Preference number: 4 (lower is better) Translates to: LEVQVYSLQTVW*PDCSEDAQEIT Trigger: CGTAATTTCCTGTGCGTCTTCAGAACAATCTGGCAACCACACAGTTTGTAAACTGTACACCTGAACTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGGCCTTGTTTGTAAGATaGCAAAATCATGTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PVINQSSTDFSARMFLVMALFVR*QNHVLI Trigger: GATGAGAACATGATTTTGGCATCTTACAAACAAGGC...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | GTCACTGTATGTTGTCACATGAGCTACTATAATAGTATCTGCCTTCTAAATGTAACCTTCAGCACGTACTaGATAGCGGCACAGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VTVCCHMSYYNSICLLNVTFSTY*IAAQPL Trigger: CAATGGCTGTGCCGCTATCCAGTACGTGCTGAAGGT...TACATTTAGAAGGCAGATACTATTATAGTAGCTCATGTGACAACATACAGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CCA 90 bp | ATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGACTTCATCCTGGTTGTTaGTTTTCATGTTTACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKYMNVSTYTKLGVRGSRLHPGC*FSCLRL Trigger: CAAACGTAAACATGAAAACCAACAACCAGGATGAAG...TCGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 90 bp | GCGTTGACCTCGGCGTTGTTGTCCAGCAGGGTGCGGCAGATGAGGTaGTGTTCCCTGCTGTACTCCTGCTCCTTGAAGCGCAGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALTSALLSSRVRQMR*CSLLYSCSLKRRAQ Trigger: CTGGGCCCTGCGCTTCAAGGAGCAGGAGTACAGCAGGGAACACCACCTCATCTGCCGCACCCTGCTGGACAACAACGCCGAGGTCAACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 90 bp | CGCAGCCCCGTGGTTCAGCAGCAGCTGGTAGCAGATCTCAGGCTGTaGAGCAGGACGCACGGAGGTGACCTTCAGCACGTACTGGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPVVQQQLVADLRL*SRTHGGDLQHVLDS Trigger: GCTATCCAGTACGTGCTGAAGGTCACCTCCGTGCGTCCTGCTGCACAGCCTGAGATCTGCTACCAGCTGCTGCTGAACCACGGGGCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 90 bp | CTCCTGCTCCTTGAAGCGCAGGGCCCAGTAGGTGGCAATGGCCAGTaGGGTCTCCATGTGGGCGTTCATGCTATCCACGATGGCCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLEAQGPVGGNGQ*GLHVGVHAIHDGPV Trigger: AACGGGGCCATCGTGGATAGCATGAACGCCCACATGGAGACCCCACTGGCCATTGCCACCTACTGGGCCCTGCGCTTCAAGGAGCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 90 bp | CCCAGTAGGTGGCAATGGCCAGTGGGGTCTCCATGTGGGCGTTCATaGTATCCACGATGGCCCCGTTCTCCACGTAGAAGGCAACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRWQWPVGSPCGRS*YPRWPRSPRRRQPA Trigger: AGCTGGTTGCCTTCTACGTGGAGAACGGGGCCATCGTGGATAGCATGAACGCCCACATGGAGACCCCACTGGCCATTGCCACCTACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 90 bp | TCAGGCTGTGCAGCAGGACGCACGGAGGTGACCTTCAGCACGTACTaGATAGCGGCACAGCCATTGATATCCATGAGGTTGGCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGCAAGRTEVTFSTY*IAAQPLISMRLASA Trigger: AGCTGAGGCCAACCTCATGGATATCAATGGCTGTGCCGCTATCCAGTACGTGCTGAAGGTCACCTCCGTGCGTCCTGCTGCACAGCCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 90 bp | GATAGCGGCACAGCCATTGATATCCATGAGGTTGGCCTCAGCTCCTaGCTCCAGCATCATGTGCATGAGCACGTGGTCGCAATTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSGTAIDIHEVGLSS*LQHHVHEHVVAIPG Trigger: GCCTGGAATTGCGACCACGTGCTCATGCACATGATGCTGGAGGCAGGAGCTGAGGCCAACCTCATGGATATCAATGGCTGTGCCGCTATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS TCA 90 bp | TGGTGCAGAAGTGCAAAGCAGTGTGCCCACTCAGGGAGTAGCAGTTaGGCTTTGCGCCACGGTCACAGAGAATCTTCACGCACTCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WCRSAKQCAHSGSSS*ALRHGHRESSRTRG Trigger: ACCTCGAGTGCGTGAAGATTCTCTGTGACCGTGGCGCAAAGCTCAACTGCTACTCCCTGAGTGGGCACACTGCTTTGCACTTCTGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS GCA 90 bp | GAAGTGCAAAGCAGTGTGCCCACTCAGGGAGTAGCAGTTGAGCTTTaGGCCACGGTCACAGAGAATCTTCACGCACTCGAGGTTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: EVQSSVPTQGVAVEL*ATVTENLHALEVGD Trigger: ATCGCCAACCTCGAGTGCGTGAAGATTCTCTGTGACCGTGGCGCAAAGCTCAACTGCTACTCCCTGAGTGGGCACACTGCTTTGCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS GCA 90 bp | CAGAGAATCTTCACGCACTCGAGGTTGGCGATTTCACAAGCCACGTaGAGAGGGGTCTTCCCGTTGGGACGACAGTTGATGGTAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QRIFTHSRLAISQAT*RGVFPLGRQLMVAL Trigger: CAATGCTACCATCAACTGTCGTCCCAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAATCGCCAACCTCGAGTGCGTGAAGATTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS TCA 90 bp | TTGATGGTAGCATTGTGGTCCAGCAGTACCATCAGGCACTCCACATaGCCAAGCAAAACTGACAGATGCAGGCCTGTGGCCCAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LMVALWSSSTIRHST*PSKTDRCRPVAQED Trigger: GTCTTCCTGGGCCACAGGCCTGCATCTGTCAGTTTTGCTTGGTCATGTGGAGTGCCTGATGGTACTGCTGGACCACAATGCTACCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS TCA 90 bp | GTGGTCCAGCAGTACCATCAGGCACTCCACATGACCAAGCAAAACTaGCAGATGCAGGCCTGTGGCCCAGGAAGACTTCAGCTTATAACT | + |
|
Preference number: 5 (lower is better) Translates to: VVQQYHQALHMTKQN*QMQACGPGRLQLIT Trigger: AGTTATAAGCTGAAGTCTTCCTGGGCCACAGGCCTGCATCTGTCAGTTTTGCTTGGTCATGTGGAGTGCCTGATGGTACTGCTGGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS GCA 90 bp | TGGCATCTGTTGTGTAGCGCTTTTCGAATGGCACATCTTGACAGGTaGATGAGGGTTCTGGGGGTGTTGCAGCACACCTTGAAGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WHLLCSAFRMAHLDR*MRVLGVLQHTLKRE Trigger: CTCTCTCTTCAAGGTGTGCTGCAACACCCCCAGAACCCTCATGCACCTGTCAAGATGTGCCATTCGAAAAGCGCTACACAACAGATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 90 bp | TCAGGCACTCCACATGACCAAGCAAAACTGACAGATGCAGGCCTGTaGCCCAGGAAGACTTCAGCTTATAACTGGGCAACCAATAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGTPHDQAKLTDAGL*PRKTSAYNWATNSL Trigger: AAGGCTATTGGTTGCCCAGTTATAAGCTGAAGTCTTCCTGGGCCACAGGCCTGCATCTGTCAGTTTTGCTTGGTCATGTGGAGTGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCTTGGCAGCTCCAGCTTaGCTGATAGGGGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSLAAPA*LIGAVM Trigger: CATCACTGCCCCTATCAGCAAAGCTGGAGCTGCCAA...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCCCGTTGGGACGACAGTaGATGGTAGCATTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSPLGRQ*MVALWS Trigger: GGACCACAATGCTACCATCAACTGTCGTCCCAACGG...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCCTCAACACCAACTGCTaGGCACAGAGGATGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSLNTNC*AQRMEL Trigger: GAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAG...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS CCA 90 bp | TGTTGGTTTTCATGTTTACGTTTGCACCTCTCAACACCAACTGCTTaGCACAGAGGATGGAGCTCGGTGTGGTGCAGAAGTGCAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWFSCLRLHLSTPTA*HRGWSSVWCRSAKQ Trigger: CTGCTTTGCACTTCTGCACCACACCGAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAGAGGTGCAAACGTAAACATGAAAACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 90 bp | TACTTCTTCAACGGCAGTGGGAGGGACAGCATAGGGATTGCTTTGTaGCATCTGTTGTGTAGCGCTTTTCGAATGGCACATCTTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YFFNGSGRDSIGIAL*HLLCSAFRMAHLDR Trigger: CCTGTCAAGATGTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCCACTGCCGTTGAAGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGCTCAACACCAACTGCTaGGCACAGAGGATGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQIHERVHLHKTGSKRVSLNTNC*AQRMEL Trigger: GAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAG...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 90 bp | TGGTTGTTGGTTTTCATGTTTACGTTTGCACCTCTCAACACCAACTaGTTGGCACAGAGGATGGAGCTCGGTGTGGTGCAGAAGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WLLVFMFTFAPLNTN*LAQRMELGVVQKCK Trigger: TTTGCACTTCTGCACCACACCGAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAGAGGTGCAAACGTAAACATGAAAACCAACAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCCAGTTGATGGTAGCATaGTGGTCCAGCAGTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSQLMVA*WSSSTI Trigger: GATGGTACTGCTGGACCACAATGCTACCATCAACTG...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGATAAATCAGTCCAGCACAGACTTTTCTGCCAGAATGTTCCTGGTGATGATAGCGGCACAGCCATaGATATCCATGAGGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVINQSSTDFSARMFLVMIAAQP*ISMRLA Trigger: GGCCAACCTCATGGATATCAATGGCTGTGCCGCTAT...CATCACCAGGAACATTCTGGCAGAAAAGTCTGTGCTGGACTGATTTATCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGCAGTTGATGGTAGCATaGTGGTCCAGCAGTACCATC | + |
|
Preference number: 5 (lower is better) Translates to: HQIHERVHLHKTGSKRVSQLMVA*WSSSTI Trigger: GATGGTACTGCTGGACCACAATGCTACCATCAACTG...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCAAAGTTGACAAGCTCTaGACTGAGACCTCTCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSKVDKL*TETSQH Trigger: GTGTTGAGAGGTCTCAGTCAAGAGCTTGTCAACTTT...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCCTTTTCTGTTGTCTCCAACTCTCTGAATAGCCTTGTTTGGAGGGACAGCTCTTTCTTAACTAATTaGGCAGCTCCAGCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAFSVVSNSLNSLVWRDSSFLTN*AAPALL Trigger: CAGCAAAGCTGGAGCTGCCAAATTAGTTAAGAAAGA...GCTGTCCCTCCAAACAAGGCTATTCAGAGAGTTGGAGACAACAGAAAAGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183358.2 |
||
| CDS-3UTR CAA 90 bp | GACTCAAAGATCTTGTTCCCACTGTACTCCTGTGCATTTGTCACCAAAAGGAGTAGCATAGGGATTGCTTaGTGGCATCTGTTGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSKILFPLYSCAFVTKRSSIGIA*WHLLCS Trigger: GCTACACAACAGATGCCACAAAGCAATCCCTATGCT...ACTCCTTTTGGTGACAAATGCACAGGAGTACAGTGGGAACAAGATCTTTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
||
| CDS-3UTR CAA 90 bp | ATGTTCCTGGTGATGGAGAGAAGCCCCCAACCCTTTGAATATTCTGAAATATGTTTGTGTAGAGGGGACTaGAAATCATCATCACGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: MFLVMERSPQPFEYSEICLCRGD*KSSSRA Trigger: CGCTCGTGATGATGATTTCAAGTCCCCTCTACACAA...ACATATTTCAGAATATTCAAAGGGTTGGGGGCTTCTCTCCATCACCAGGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
||
| CDS-3UTR CAA 90 bp | TGTCTATTCCTAGGCTATAAAGTAAACTGCTCTTCCCTTCTTTTTCTATCTAGATTGGCAGCTCCAGCTTaGCTGATAGGGGCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CLFLGYKVNCSSLLFLSRLAAPA*LIGAVM Trigger: CATCACTGCCCCTATCAGCAAAGCTGGAGCTGCCAA...TCTAGATAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCCTAGGAATAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
||
| CDS-3UTR CAA 90 bp | ACCTACACAAAACTGGGAGTAAGAGGGTCTCGATTTACAAACACAGCTACATCGTCTTTCTTAACTAATTaGGCAGCTCCAGCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TYTKLGVRGSRFTNTATSSFLTN*AAPALL Trigger: CAGCAAAGCTGGAGCTGCCAAATTAGTTAAGAAAGA...CGATGTAGCTGTGTTTGTAAATCGAGACCCTCTTACTCCCAGTTTTGTGTAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
||
| CDS-3UTR CAA 90 bp | GTCACTGTATGTTGTCACATGAGCTACTATAATAGTATCTGCCTTCTAAATGTACCGTTGGGACGACAGTaGATGGTAGCATTGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VTVCCHMSYYNSICLLNVPLGRQ*MVALWS Trigger: GGACCACAATGCTACCATCAACTGTCGTCCCAACGG...TACATTTAGAAGGCAGATACTATTATAGTAGCTCATGTGACAACATACAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | CATCAAATACATGAACGTGTCCACCTACACAAAACTGGGAGTAAGAGGGTCTCGTTTTCATGTTTACGTTaGCACCTCTCAACACCAACT | + |
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Preference number: 5 (lower is better) Translates to: HQIHERVHLHKTGSKRVSFSCLR*HLSTPT Trigger: AGTTGGTGTTGAGAGGTGCAAACGTAAACATGAAAA...CGAGACCCTCTTACTCCCAGTTTTGTGTAGGTGGACACGTTCATGTATTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | TGTCTATTCCTAGGCTATAAAGTAAACTGCTCTTCCCTTCTTTTTCTATCTAGAAGGGTTCTGGGGGTGTaGCAGCACACCTTGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: CLFLGYKVNCSSLLFLSRRVLGV*QHTLKR Trigger: TCTCTTCAAGGTGTGCTGCAACACCCCCAGAACCCT...TCTAGATAGAAAAAGAAGGGAAGAGCAGTTTACTTTATAGCCTAGGAATAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS-3UTR CAA 90 bp | ATGTTCCTGGTGATGGAGAGAAGCCCCCAACCCTTTGAATATTCTGAAATATGTGTTTTCCGAAGTCATTaGTTTTTAGAGCCTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: MFLVMERSPQPFEYSEICVFRSH*FLEPPG Trigger: TCCTGGAGGCTCTAAAAACAAATGACTTCGGAAAAC...ACATATTTCAGAATATTCAAAGGGTTGGGGGCTTCTCTCCATCACCAGGAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | GCAAGAGTGGCAAGCCTGGATCACCTTGTGGAACTGTaGGGGGTAGATGCGCGCAGCCCCGTGGTTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ARVASLDHLVEL*GVDARSPVVQQ Trigger: CTGCTGAACCACGGGGCTGCGCGCATCTACCCCCCACAGTTCCACAAGGTGATCCAGGCTTGCCACTCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 72 bp | TGGCAATGGCCAGTGGGGTCTCCATGTGGGCGTTCATaGTATCCACGATGGCCCCGTTCTCCACGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: WQWPVGSPCGRS*YPRWPRSPRRR Trigger: CCTTCTACGTGGAGAACGGGGCCATCGTGGATAGCATGAACGCCCACATGGAGACCCCACTGGCCATTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | GTGGGGTCTCCATGTGGGCGTTCATGCTATCCACGATaGCCCCGTTCTCCACGTAGAAGGCAACCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VGSPCGRSCYPR*PRSPRRRQPAQ Trigger: CTGAGCTGGTTGCCTTCTACGTGGAGAACGGGGCCATCGTGGATAGCATGAACGCCCACATGGAGACCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | CTTGAAGCGCAGGGCCCAGTAGGTGGCAATGGCCAGTaGGGTCTCCATGTGGGCGTTCATGCTATCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: LEAQGPVGGNGQ*GLHVGVHAIHD Trigger: ATCGTGGATAGCATGAACGCCCACATGGAGACCCCACTGGCCATTGCCACCTACTGGGCCCTGCGCTTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | CGCCACGGTCACAGAGAATCTTCACGCACTCGAGGTTaGCGATTTCACAAGCCACGTGCAGAGGGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RHGHRESSRTRG*RFHKPRAEGSS Trigger: GGAAGACCCCTCTGCACGTGGCTTGTGAAATCGCCAACCTCGAGTGCGTGAAGATTCTCTGTGACCGTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CCA 72 bp | TCAGCTCCTGCCTCCAGCATCATGTGCATGAGCACGTaGTCGCAATTCCAGGCAGCCTTGTGTAGAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SAPASSIMCMST*SQFQAALCRGD Trigger: GTCCCCTCTACACAAGGCTGCCTGGAATTGCGACCACGTGCTCATGCACATGATGCTGGAGGCAGGAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | GCCACGTGCAGAGGGGTCTTCCCGTTGGGACGACAGTaGATGGTAGCATTGTGGTCCAGCAGTACCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATCRGVFPLGRQ*MVALWSSSTIR Trigger: CCTGATGGTACTGCTGGACCACAATGCTACCATCAACTGTCGTCCCAACGGGAAGACCCCTCTGCACGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CAA 72 bp | GCGCCACGGTCACAGAGAATCTTCACGCACTCGAGGTaGGCGATTTCACAAGCCACGTGCAGAGGGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: APRSQRIFTHSR*AISQATCRGVF Trigger: GAAGACCCCTCTGCACGTGGCTTGTGAAATCGCCAACCTCGAGTGCGTGAAGATTCTCTGTGACCGTGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CAA 90 bp | TTGAGCTTTGCGCCACGGTCACAGAGAATCTTCACGCACTCGAGGTaGGCGATTTCACAAGCCACGTGCAGAGGGGTCTTCCCGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSFAPRSQRIFTHSR*AISQATCRGVFPLG Trigger: TCCCAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAATCGCCAACCTCGAGTGCGTGAAGATTCTCTGTGACCGTGGCGCAAAGCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CCA 72 bp | GCAGCAGGACGCACGGAGGTGACCTTCAGCACGTACTaGATAGCGGCACAGCCATTGATATCCATGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AAGRTEVTFSTY*IAAQPLISMRL Trigger: CAACCTCATGGATATCAATGGCTGTGCCGCTATCCAGTACGTGCTGAAGGTCACCTCCGTGCGTCCTGCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | GCGATTTCACAAGCCACGTGCAGAGGGGTCTTCCCGTaGGGACGACAGTTGATGGTAGCATTGTGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AISQATCRGVFP*GRQLMVALWSS Trigger: GCTGGACCACAATGCTACCATCAACTGTCGTCCCAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CAA 72 bp | GTGACCTTCAGCACGTACTGGATAGCGGCACAGCCATaGATATCCATGAGGTTGGCCTCAGCTCCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VTFSTYWIAAQP*ISMRLASAPAS Trigger: GGAGGCAGGAGCTGAGGCCAACCTCATGGATATCAATGGCTGTGCCGCTATCCAGTACGTGCTGAAGGTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 90 bp | TCGAGGTTGGCGATTTCACAAGCCACGTGCAGAGGGGTCTTCCCGTaGGGACGACAGTTGATGGTAGCATTGTGGTCCAGCAGTACCATC | + |
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Preference number: 6 (lower is better) Translates to: SRLAISQATCRGVFP*GRQLMVALWSSSTI Trigger: GATGGTACTGCTGGACCACAATGCTACCATCAACTGTCGTCCCAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAATCGCCAACCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CAA 90 bp | ATTTCACAAGCCACGTGCAGAGGGGTCTTCCCGTTGGGACGACAGTaGATGGTAGCATTGTGGTCCAGCAGTACCATCAGGCACTCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISQATCRGVFPLGRQ*MVALWSSSTIRHST Trigger: TGTGGAGTGCCTGATGGTACTGCTGGACCACAATGCTACCATCAACTGTCGTCCCAACGGGAAGACCCCTCTGCACGTGGCTTGTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CAA 90 bp | ATGAGCACGTGGTCGCAATTCCAGGCAGCCTTGTGTAGAGGGGACTaGAAATCATCATCACGAGCGTTGACCTCGGCGTTGTTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MSTWSQFQAALCRGD*KSSSRALTSALLSS Trigger: GCTGGACAACAACGCCGAGGTCAACGCTCGTGATGATGATTTCAAGTCCCCTCTACACAAGGCTGCCTGGAATTGCGACCACGTGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 90 bp | TCCAGCATCATGTGCATGAGCACGTGGTCGCAATTCCAGGCAGCCTaGTGTAGAGGGGACTTGAAATCATCATCACGAGCGTTGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSIMCMSTWSQFQAA*CRGDLKSSSRALTS Trigger: CGAGGTCAACGCTCGTGATGATGATTTCAAGTCCCCTCTACACAAGGCTGCCTGGAATTGCGACCACGTGCTCATGCACATGATGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS GCA 72 bp | TTGTGTAGCGCTTTTCGAATGGCACATCTTGACAGGTaGATGAGGGTTCTGGGGGTGTTGCAGCACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: LCSAFRMAHLDR*MRVLGVLQHTL Trigger: CAAGGTGTGCTGCAACACCCCCAGAACCCTCATGCACCTGTCAAGATGTGCCATTCGAAAAGCGCTACACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | CCACATGACCAAGCAAAACTGACAGATGCAGGCCTGTaGCCCAGGAAGACTTCAGCTTATAACTGGGCAACC | + |
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Preference number: 6 (lower is better) Translates to: PHDQAKLTDAGL*PRKTSAYNWAT Trigger: GGTTGCCCAGTTATAAGCTGAAGTCTTCCTGGGCCACAGGCCTGCATCTGTCAGTTTTGCTTGGTCATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS CCA 72 bp | AAGTGGGCCGCCGTGTGCAGGGGTGTCTCTTCATCCTaGTTGTTGGTTTTCATGTTTACGTTTGCACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KWAAVCRGVSSS*LLVFMFTFAPL Trigger: GAGAGGTGCAAACGTAAACATGAAAACCAACAACCAGGATGAAGAGACACCCCTGCACACGGCGGCCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | GCCGCCGTGTGCAGGGGTGTCTCTTCATCCTGGTTGTaGGTTTTCATGTTTACGTTTGCACCTCTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: AAVCRGVSSSWL*VFMFTFAPLNT Trigger: GGTGTTGAGAGGTGCAAACGTAAACATGAAAACCAACAACCAGGATGAAGAGACACCCCTGCACACGGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | TGGGCCGCCGTGTGCAGGGGTGTCTCTTCATCCTGGTaGTTGGTTTTCATGTTTACGTTTGCACCTCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WAAVCRGVSSSW*LVFMFTFAPLN Trigger: GTTGAGAGGTGCAAACGTAAACATGAAAACCAACAACCAGGATGAAGAGACACCCCTGCACACGGCGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | ATGTGCATGAGCACGTGGTCGCAATTCCAGGCAGCCTaGTGTAGAGGGGACTTGAAATCATCATCACGAGCG | + |
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Preference number: 6 (lower is better) Translates to: MCMSTWSQFQAA*CRGDLKSSSRA Trigger: CGCTCGTGATGATGATTTCAAGTCCCCTCTACACAAGGCTGCCTGGAATTGCGACCACGTGCTCATGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 90 bp | AACGGCAGTGGGAGGGACAGCATAGGGATTGCTTTGTGGCATCTGTaGTGTAGCGCTTTTCGAATGGCACATCTTGACAGGTGCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: NGSGRDSIGIALWHL*CSAFRMAHLDRCMR Trigger: CCTCATGCACCTGTCAAGATGTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCCACTGCCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | CCGCCGTGTGCAGGGGTGTCTCTTCATCCTGGTTGTTaGTTTTCATGTTTACGTTTGCACCTCTCAACACCA | + |
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Preference number: 6 (lower is better) Translates to: PPCAGVSLHPGC*FSCLRLHLSTP Trigger: TGGTGTTGAGAGGTGCAAACGTAAACATGAAAACCAACAACCAGGATGAAGAGACACCCCTGCACACGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | AACGGCAGTGGGAGGGACAGCATAGGGATTGCTTTGTaGCATCTGTTGTGTAGCGCTTTTCGAATGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: NGSGRDSIGIAL*HLLCSAFRMAH Trigger: ATGTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCCACTGCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | TTCATGTTTACGTTTGCACCTCTCAACACCAACTGCTaGGCACAGAGGATGGAGCTCGGTGTGGTGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FMFTFAPLNTNC*AQRMELGVVQK Trigger: CTTCTGCACCACACCGAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAGAGGTGCAAACGTAAACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | GGGAGGGACAGCATAGGGATTGCTTTGTGGCATCTGTaGTGTAGCGCTTTTCGAATGGCACATCTTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GRDSIGIALWHL*CSAFRMAHLDR Trigger: CCTGTCAAGATGTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 72 bp | TTCAACGGCAGTGGGAGGGACAGCATAGGGATTGCTTaGTGGCATCTGTTGTGTAGCGCTTTTCGAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: FNGSGRDSIGIA*WHLLCSAFRMA Trigger: TGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCCACTGCCGTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 90 bp | AGGTACTTCTTCAACGGCAGTGGGAGGGACAGCATAGGGATTGCTTaGTGGCATCTGTTGTGTAGCGCTTTTCGAATGGCACATCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RYFFNGSGRDSIGIA*WHLLCSAFRMAHLD Trigger: GTCAAGATGTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATGCTGTCCCTCCCACTGCCGTTGAAGAAGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CAA 90 bp | TTGTTGGTTTTCATGTTTACGTTTGCACCTCTCAACACCAACTGCTaGGCACAGAGGATGGAGCTCGGTGTGGTGCAGAAGTGCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLVFMFTFAPLNTNC*AQRMELGVVQKCKA Trigger: TGCTTTGCACTTCTGCACCACACCGAGCTCCATCCTCTGTGCCAAGCAGTTGGTGTTGAGAGGTGCAAACGTAAACATGAAAACCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043294.12 |
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| CDS CCA 72 bp | GCAGGCCTGTGGCCCAGGAAGACTTCAGCTTATAACTaGGCAACCAATAGCCTTGTTTGTAAGATGCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: AGLWPRKTSAYN*ATNSLVCKMPK Trigger: TTTTGGCATCTTACAAACAAGGCTATTGGTTGCCCAGTTATAAGCTGAAGTCTTCCTGGGCCACAGGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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| CDS GCA 72 bp | TCATCTTCAACTTCAAACACTGTGTCCACATCTATTTaGCTCTCGATTAAAATAGCCTTCAGTTTTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSTSNTVSTSI*LSIKIAFSFPK Trigger: CTTCGGAAAACTGAAGGCTATTTTAATCGAGAGGCAAATAGATGTGGACACAGTGTTTGAAGTTGAAGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043294.12 ENSMUST00000183358.2 |
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