Pregenerated sensors for ASB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020305Ensembl transcript IDs: ENSMUST00000020551.13, ENSMUST00000117883.2, ENSMUST00000137306.8, ENSMUST00000203878.3
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGCAAATAGTTCTGCAGACTTCTGGGAAGTGGCAACTGATGGATaGAAATGTCAGAGTGAAGGTGCTCTGCTTTTAGACTGGCCCGAA | + |
|
Preference number: 1 (lower is better) Translates to: RANSSADFWEVATDG*KCQSEGALLLDWPE Trigger: TTCGGGCCAGTCTAAAAGCAGAGCACCTTCACTCTGACATTTTCATCCATCAGTTGCCACTTCCCAGAAGTCTGCAGAACTATTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 90 bp | AAACGACAAAGATGGGTTAGGCTTGGAACAGAGGCCAAATGTTGTTaGAGAGCCCAAGAGGAGTTTGCACGAACAGAGAGCATCTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: KRQRWVRLGTEAKCC*RAQEEFARTESIFS Trigger: TGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCTGTTCCAAGCCTAACCCATCTTTGTCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 90 bp | GAATTAAAGGACCTGTGTCAGGTGGCCTTGCTGGTTTCTCCATCCTaGTTAGCTGCTGGTTCTAGAATCTCATTCATTCTTAAAACCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ELKDLCQVALLVSPS*LAAGSRISFILKTS Trigger: AGAGGTTTTAAGAATGAATGAGATTCTAGAACCAGCAGCTAATCAGGATGGAGAAACCAGCAAGGCCACCTGACACAGGTCCTTTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 90 bp | TTCCATCCACTCATAGAATGGGATCCATTGACATTTGCTCCATGTTaGAGCAACAGCTTTAATACATCTATCCGTCCACTTTCAACAGCT | + |
|
Preference number: 1 (lower is better) Translates to: FHPLIEWDPLTFAPC*SNSFNTSIRPLSTA Trigger: AGCTGTTGAAAGTGGACGGATAGATGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGTCAATGGATCCCATTCTATGAGTGGATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR GCA 90 bp | GTAAAGATGAGCTTGTCTTCCCAATCAGTTATCAGTAAGACATTATaGTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACCC | + |
|
Preference number: 1 (lower is better) Translates to: VKMSLSSQSVISKTL*FFQGLIKMRPADLP Trigger: GGGTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR TCA 90 bp | AGCCCAAGAGGAGTTTGCACGAACAGAGAGCATCTTTTCAACAGCTaGAGGAAGTCTCTTCCAATTAGAAAATTCCAAAGTAAAGATAAG | + |
|
Preference number: 1 (lower is better) Translates to: SPRGVCTNREHLFNS*RKSLPIRKFQSKDK Trigger: CTTATCTTTACTTTGGAATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR CCA 90 bp | AATACACAACAAAGTGCACTAGAAATAAAACTGAGTAAGGCAAGATaGATAAGGTTCACAATATTGGGAAAGACACAAACTGGGAAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: NTQQSALEIKLSKAR*IRFTILGKTQTGKS Trigger: GCTTTTCCCAGTTTGTGTCTTTCCCAATATTGTGAACCTTATCCATCTTGCCTTACTCAGTTTTATTTCTAGTGCACTTTGTTGTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGGCTGGCTCAGACCTTGTTTGCCACAGTTCCCAGCTCACCTAGAGTCTTCGCTTGTTACTTCTCTTaGTGCCTTTTCCATCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: SRLAQTLFATVPSSPRVFACYFS*CLFHPT Trigger: GGTTGGATGGAAAAGGCAGCAAGAGAAGTAACAAGC...GAAGACTCTAGGTGAGCTGGGAACTGTGGCAAACAAGGTCTGAGCCAGCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR CAA 90 bp | GGCTTGGAACAGAGGCCAAATGTTGTTGAAGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GLEQRPNVVEEPKRS*HEQRASFQQLKEVS Trigger: AGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCTGTTCCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR CAA 90 bp | CTTTTAGACTGGCCCGAATTTCCAAACGACAAAGATGGGTTAGGCTaGGAACAGAGGCCAAATGTTGTTGAAGAGCCCAAGAGGAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLDWPEFPNDKDGLG*EQRPNVVEEPKRSL Trigger: CAAACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCTGTTCCAAGCCTAACCCATCTTTGTCGTTTGGAAATTCGGGCCAGTCTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCCCAGTCTCAGGTTGCTaGCAAGAGATGAAGGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SVRHYASFKGLSKCDQLIPVSGC*QEMKAC Trigger: GCAAGCCTTCATCTCTTGCCAGCAACCTGAGACTGG...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTATAGCCATTCTGCAGTAACATTTCCAGGCACTCTTCCCGTCCTCCAAACAACAAGCCGTCTTTTGTaGCTAAACAGAATTAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GYSHSAVTFPGTLPVLQTTSRLL*LNRIKG Trigger: TCCTTTAATTCTGTTTAGTCACAAAAGACGGCTTGT...TGTTTGGAGGACGGGAAGAGTGCCTGGAAATGTTACTGCAGAATGGCTATAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTATAGCCATTCTGCAGTAACATTTCCAGGCACTCTTCCCGTCCTCCAAACAACATTTGCTCCATGTTaGAGCAACAGCTTTAATACA | + |
|
Preference number: 2 (lower is better) Translates to: GYSHSAVTFPGTLPVLQTTFAPC*SNSFNT Trigger: TGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGT...TGTTTGGAGGACGGGAAGAGTGCCTGGAAATGTTACTGCAGAATGGCTATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACCCAGTCTCAGGTTaGTGGCAAGAGATGAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVRHYASFKGLSKCDQLIYPVSG*WQEMKA Trigger: AGCCTTCATCTCTTGCCAGCAACCTGAGACTGGGTA...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR CAA 90 bp | CAGAGGTGTGATTCCAAAGTCATCTTGGCATTCTCTGTCTGCTCCTaGTTTAAGAAGCAATCTTATAGTCTCAGCATTTCCCTGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QRCDSKVILAFSVCS*FKKQSYSLSISLER Trigger: TCTTTCCAGGGAAATGCTGAGACTATAAGATTGCTTCTTAAACAAGGAGCAGACAGAGAATGCCAAGATGACTTTGGAATCACACCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCAGGCAGTATGCCAAGTaGAGTTCATTTAACTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVRHYASFKGLSKCDQLIRQYAK*SSFNWA Trigger: AGCCCAGTTAAATGAACTTCACTTGGCATACTGCCT...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR CAA 90 bp | TTGGGAAAGACACAAACTGGGAAAAGCAACTGTAAACATGGACATTaGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LGKTQTGKSNCKHGH*ITKSKQSHKPSFVT Trigger: AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTTACAGTTGCTTTTCCCAGTTTGTGTCTTTCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | TATATCCTCACAAAACAAGACTTGAATGTAAAGATGAGCTTGTCTTCCCAATCAGTTGCTGGCAAGAGATaGAGGCTTGCCTCCTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: YILTKQDLNVKMSLSSQSVAGKR*RLASFR Trigger: TCTAAAGGAGGCAAGCCTTCATCTCTTGCCAGCAAC...TGATTGGGAAGACAAGCTCATCTTTACATTCAAGTCTTGTTTTGTGAGGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAAGTCACATCCAGCACCACATCAGAATTACAGTTTATTAGCAGAATAAAGTACCCAGTCTCAGGTTaGTGGCAAGAGATGAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KEVTSSTTSELQFISRIKYPVSG*WQEMKA Trigger: AGCCTTCATCTCTTGCCAGCAACCTGAGACTGGGTA...CTTTATTCTGCTAATAAACTGTAATTCTGATGTGGTGCTGGATGTGACTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | TATATCCTCACAAAACAAGACTTGAATGTAAAGATGAGCTTGTCTTCCCAATCACAACCCAAGAGCTGCTaGACAGCAGAATCAATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: YILTKQDLNVKMSLSSQSQPKSC*TAESMG Trigger: ACCCATTGATTCTGCTGTGCAGCAGCTCTTGGGTTG...TGATTGGGAAGACAAGCTCATCTTTACATTCAAGTCTTGTTTTGTGAGGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCGCTTTATCCAAGGCTTaGCAATTGACATTTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SVRHYASFKGLSKCDQLIALSKA*QLTFAP Trigger: TGGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGC...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGAGCTTGTCTTCCCAATCAGTTATCAGTAAGACATTATGCTTCTTTCAATCCAAGGTCTCTGTATaGCCCATTTGTGCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KMSLSSQSVISKTLCFFQSKVSV*PICAAA Trigger: TGCTGCTGCACAAATGGGCCATACAGAGACCTTGGA...TTGAAAGAAGCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTCTCTTATTCTGGAGCTaGATGAAGCCTGGCTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: VISKTLCFFQGLIKMRPALLFWS*MKPGYY Trigger: ATAATAGCCAGGCTTCATTCAGCTCCAGAATAAGAG...AGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCTTCCAATTAGAAAATCTCTTATTCTGGAGCTaGATGAAGCCTGGCTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: RTESIFSTAEGSLFQLENLLFWS*MKPGYY Trigger: ATAATAGCCAGGCTTCATTCAGCTCCAGAATAAGAG...ATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGAGCTTGTCTTCCCAATCAGTTATCAGTAAGACATTATGCTTCTTTCAAAGCCCAAGAGGAGTTTaGACGAACAGAGAGCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: KMSLSSQSVISKTLCFFQSPRGV*TNREHL Trigger: AAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCT...TTGAAAGAAGCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTTCCACACATTTTGTATaGCCCTCTTGTGCAGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: CKNSQGSSILRSIFHPRSSTHFV*PSCAAI Trigger: TATTGCTGCACAAGAGGGTCATACAAAATGTGTGGA...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCTTCCAATTAGAAAATAAAACTTCTCATACTTaGGGCAGTATGCCAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTESIFSTAEGSLFQLENKTSHT*GSMPSE Trigger: TTCACTTGGCATACTGCCTCAAGTATGAGAAGTTTT...ATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCTTCCAATTAGAAAATTGTATGACCCTCTTGTaGAGCAATAAACAAAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RTESIFSTAEGSLFQLENCMTLL*SNKQRS Trigger: ACTCCTTTGTTTATTGCTGCACAAGAGGGTCATACA...ATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTATGAATTCAGATGTATaGTTCCAAGGTACCATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CKNSQGSSILRSIFHPRSMNSDV*FQGTIR Trigger: CCTGATGGTACCTTGGAATCATACATCTGAATTCAT...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTTAGGCTAGCCTGGACTACAAGAAAGACCAACAACAAGATAATCAATTCACATGCTTTCCACATATaGAGAAATCCATATTATGCC | + |
|
Preference number: 2 (lower is better) Translates to: SFRLAWTTRKTNNKIINSHAFHI*RNPYYA Trigger: GGCATAATATGGATTTCTTCATATGTGGAAAGCATG...TGAATTGATTATCTTGTTGTTGGTCTTTCTTGTAGTCCAGGCTAGCCTAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTCTGAGTAAGGCAAGATaGATAAGGTTCACAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: CKNSQGSSILRSIFHPRSLSKAR*IRFTIL Trigger: CAATATTGTGAACCTTATCCATCTTGCCTTACTCAG...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGGAGCTGAATGAAGCCTaGCTATTATATTTAGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: LSVRHYASFKGLSKCDQLELNEA*LLYLAL Trigger: TAATGCTAAATATAATAGCCAGGCTTCATTCAGCTC...CAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAAGTCACATCCAGCACCACATCAGAATTACAGTTTATTAGCAGAATAAAGACAAGCCGTCTTTTGTaGCTAAACAGAATTAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KEVTSSTTSELQFISRIKTSRLL*LNRIKG Trigger: TCCTTTAATTCTGTTTAGTCACAAAAGACGGCTTGT...CTTTATTCTGCTAATAAACTGTAATTCTGATGTGGTGCTGGATGTGACTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGAGCTTGTCTTCCCAATCAGTTATCAGTAAGACATTATGCTTCTTTCAAGTAAACATGGACATTTaGTCACCAAATCCAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KMSLSSQSVISKTLCFFQVNMDI*SPNPNS Trigger: ACTGTTTGGATTTGGTGATCAAATGTCCATGTTTAC...TTGAAAGAAGCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | CTGCAGCTTCATGCAAGACGCTACCTGCTGAGCAGCTaGGCTTGTTTTCCTGATAAAGCAAACAGGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LQLHARRYLLSS*ACFPDKANRRS Trigger: GGATCTCCTGTTTGCTTTATCAGGAAAACAAGCTCAGCTGCTCAGCAGGTAGCGTCTTGCATGAAGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR GCA 72 bp | GGATGTCATCACTGGCTGAATCAACCCAAGAGCTGCTaGACAGCAGAATCAATGGGTCAAATCCAGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GCHHWLNQPKSC*TAESMGQIQQA Trigger: TGCTTGCTGGATTTGACCCATTGATTCTGCTGTGCAGCAGCTCTTGGGTTGATTCAGCCAGTGATGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR CCA 72 bp | TCCAAACACTGCAGAATAAACAGGGCTCACTTTGTCTaGTCCAGTGTCACAAGCCCGGTTAGTACGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SKHCRINRAHFV*SSVTSPVSTWY Trigger: ATACCACGTACTAACCGGGCTTGTGACACTGGACCAGACAAAGTGAGCCCTGTTTATTCTGCAGTGTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | TCTTTTGTCTGCAGCTTCATGCAAGACGCTACCTGCTaGGCAGCTGAGCTTGTTTTCCTGATAAAGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SFVCSFMQDATC*AAELVFLIKQT Trigger: TGTTTGCTTTATCAGGAAAACAAGCTCAGCTGCTCAGCAGGTAGCGTCTTGCATGAAGCTGCAGACAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR GCA 72 bp | GTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATaGGACCAGCTGATCTACCCAGTCTCAGGTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRHYASFKGLSK*DQLIYPVSGCW Trigger: CCAGCAACCTGAGACTGGGTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAGCTCACCTAGAGTCTTCTGACCTAGGTAAATTCTTTTGTCTGCAGCTTGAACTTTGTCTTGGCTaGTTACTTCTCTTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPAHLESSDLGKFFCLQLELCLG*LLLLLP Trigger: AGGCAGCAAGAGAAGTAACAAGCCAAGACAAAGTTC...AAGCTGCAGACAAAAGAATTTACCTAGGTCAGAAGACTCTAGGTGAGCTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTTAGGCTAGCCTGGACTACAAGAAAGACCAACAACAAGATAATCAATTCATGGCTCAGACCTTGTTaGCCACAGTTCCCAGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SFRLAWTTRKTNNKIINSWLRPC*PQFPAH Trigger: GTGAGCTGGGAACTGTGGCAAACAAGGTCTGAGCCA...TGAATTGATTATCTTGTTGTTGGTCTTTCTTGTAGTCCAGGCTAGCCTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR TCA 72 bp | TTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCTaGAACTCGTGGCTGCCAGTGGCTACAATTTACTAT | + |
|
Preference number: 3 (lower is better) Translates to: FSIQPHLSFQEL*NSWLPVATIYY Trigger: ATAGTAAATTGTAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR TCA 72 bp | TCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTaGCTAAACAGAATTAAAGGACCTGTGTCAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPNPNSHTSRLL*LNRIKGPVSGG Trigger: GCCACCTGACACAGGTCCTTTAATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAGTCACATCCAGCACCACATCAGAATTACAGTTTATTAGCAGAATAAAGCTACCCAGTCTCAGGTaGCTGGCAAGAGATGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KEVTSSTTSELQFISRIKLPSLR*LARDEG Trigger: GCCTTCATCTCTTGCCAGCAACCTGAGACTGGGTAG...CTTTATTCTGCTAATAAACTGTAATTCTGATGTGGTGCTGGATGTGACTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCAGAGGCCAAATGTTGTaGAAGAGCCCAAGAGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVRHYASFKGLSKCDQLIRGQML*KSPRGV Trigger: AACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCT...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR CCA 72 bp | TTCATAGAGCAAATAGTTCTGCAGACTTCTGGGAAGTaGCAACTGATGGATGAAAATGTCAGAGTGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FIEQIVLQTSGK*QLMDENVRVKV Trigger: CACCTTCACTCTGACATTTTCATCCATCAGTTGCCACTTCCCAGAAGTCTGCAGAACTATTTGCTCTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | TTGCCTCCTTTAGAAACCAGCCTGTTCTGTCTATATTaGCAGCAACACTCTAGTACCTTCTTAAGGCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPPLETSLFCLY*QQHSSTFLRLV Trigger: AACTAGCCTTAAGAAGGTACTAGAGTGTTGCTGTCAATATAGACAGAACAGGCTGGTTTCTAAAGGAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACAAAGTTCCACACATTTaGTATGACCCTCTTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VRHYASFKGLSKCDQLIYKVPHI*YDPLVQ Trigger: CTGCACAAGAGGGTCATACAAAATGTGTGGAACTTT...GTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATCTCATTCATTCTTAAAACCTCTTCATAGAGCAAATAGTTCTGCAGACTTCCTCTGTATGGCCCATTaGTGCAGCAGCATGAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESHSFLKPLHRANSSADFLCMAH*CSSMNR Trigger: CCTATTCATGCTGCTGCACAAATGGGCCATACAGAG...GAAGTCTGCAGAACTATTTGCTCTATGAAGAGGTTTTAAGAATGAATGAGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | CTCATAGAATGGGATCCATTGACATTTGCTCCATGTTaGAGCAACAGCTTTAATACATCTATCCGTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LIEWDPLTFAPC*SNSFNTSIRPL Trigger: AAGTGGACGGATAGATGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGTCAATGGATCCCATTCTATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | GGAGTTTGCACGAACAGAGAGCATCTTTTCAACAGCTaGAGGAAGTCTCTTCCAATTAGAAAATTCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GVCTNREHLFNS*RKSLPIRKFQS Trigger: ACTTTGGAATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACATGCTGTGTATGACTTaGAGTTTAGATGTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VRHYASFKGLSKCDQLIYMLCMT*SLDVFL Trigger: CAAGAACACATCTAAACTCAAAGTCATACACAGCAT...GTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | ATTGAAAACTTCTCATACTTGAGGCAGTATGCCAAGTaGAGTTCATTTAACTGGGCTCCATACTTCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IENFSYLRQYAK*SSFNWAPYFKR Trigger: TCTTTTGAAGTATGGAGCCCAGTTAAATGAACTTCACTTGGCATACTGCCTCAAGTATGAGAAGTTTTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTATGCTGTGTATGACTTaGAGTTTAGATGTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CKNSQGSSILRSIFHPRSMLCMT*SLDVFL Trigger: CAAGAACACATCTAAACTCAAAGTCATACACAGCAT...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAGTCACATCCAGCACCACATCAGAATTACAGTTTATTAGCAGAATAAAGCTCACAAAACAAGACTaGAATGTAAAGATGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KEVTSSTTSELQFISRIKLTKQD*NVKMSL Trigger: CAAGCTCATCTTTACATTCAAGTCTTGTTTTGTGAG...CTTTATTCTGCTAATAAACTGTAATTCTGATGTGGTGCTGGATGTGACTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | CCTTTAATATCAGACTCTAAAATTAAAGTTGGGCCTTaGTCAGAGAACTTTGTCTTGGCTTGTTACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLISDSKIKVGP*SENFVLACYFS Trigger: AGAGAAGTAACAAGCCAAGACAAAGTTCTCTGATCAAGGCCCAACTTTAATTTTAGAGTCTGATATTAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR CCA 72 bp | CAAAGTGCACTAGAAATAAAACTGAGTAAGGCAAGATaGATAAGGTTCACAATATTGGGAAAGACACAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QSALEIKLSKAR*IRFTILGKTQT Trigger: AGTTTGTGTCTTTCCCAATATTGTGAACCTTATCCATCTTGCCTTACTCAGTTTTATTTCTAGTGCACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR TCA 72 bp | ACAGGAACAAAGCTGCTCTCTTATTCTGGAGCTGAATaGAGCCTGGCTATTATATTTAGCATTAAATTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TGTKLLSYSGAE*SLAIIFSIKLI Trigger: TATTAATTTAATGCTAAATATAATAGCCAGGCTTCATTCAGCTCCAGAATAAGAGAGCAGCTTTGTTCCTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCTGGCTCAGACCTTGTTTGCCACAGTTCCCAGCTCACCTAGAGTCTTCAGCCCAAGAGGAGTTTaGACGAACAGAGAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRLAQTLFATVPSSPRVFSPRGV*TNREHL Trigger: AAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCT...GAAGACTCTAGGTGAGCTGGGAACTGTGGCAAACAAGGTCTGAGCCAGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGCCTATCTGTGCCCGGTaGCCTGGAAGCTGCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVPICAR*PGSCRA Trigger: AGCCCGGCAGCTTCCAGGCCACCGGGCACAGATAGG...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | GTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCAGGGCTCACTTTGTCTaGTCCAGTGTCACAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLAAFSIQPHLSFQELRAHFV*SSVTSP Trigger: CGGGCTTGTGACACTGGACCAGACAAAGTGAGCCCT...GAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTTCCAAGGTCTCTGTATaGCCCATTTGTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFHPTPSFLSGTLKLVASKVSV*PICAAA Trigger: TGCTGCTGCACAAATGGGCCATACAGAGACCTTGGA...AGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR CAA 72 bp | CTACCCAGTCTCAGGTTGCTGGCAAGAGATGAAGGCTaGCCTCCTTTAGAAACCAGCCTGTTCTGTCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLRLLARDEG*PPLETSLFCLY Trigger: ATATAGACAGAACAGGCTGGTTTCTAAAGGAGGCAAGCCTTCATCTCTTGCCAGCAACCTGAGACTGGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR CAA 72 bp | ATCAAAATGCGACCAGCTGATCTACCCAGTCTCAGGTaGCTGGCAAGAGATGAAGGCTTGCCTCCTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKMRPADLPSLR*LARDEGLPPLE Trigger: TTCTAAAGGAGGCAAGCCTTCATCTCTTGCCAGCAACCTGAGACTGGGTAGATCAGCTGGTCGCATTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| 3UTR CAA 72 bp | TGGCCCGAATTTCCAAACGACAAAGATGGGTTAGGCTaGGAACAGAGGCCAAATGTTGTTGAAGAGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPEFPNDKDGLG*EQRPNVVEEPK Trigger: CTTGGGCTCTTCAACAACATTTGGCCTCTGTTCCAAGCCTAACCCATCTTTGTCGTTTGGAAATTCGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR TCA 90 bp | GTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCTCTAGCTTCCCATACTaGGCAGCCACAAACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLAAFSIQPHLSFQELSSFPY*AATNRG Trigger: ACCTCTGTTTGTGGCTGCTCAGTATGGGAAGCTAGA...GAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAGGGCTCACTTTGTCTaGTCCAGTGTCACAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTRAHFV*SSVTSP Trigger: CGGGCTTGTGACACTGGACCAGACAAAGTGAGCCCT...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | TCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTATGTATGACCCTCTTGTaGAGCAATAAACAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNPIFPFRNSETRGCQWLCMTLL*SNKQRS Trigger: ACTCCTTTGTTTATTGCTGCACAAGAGGGTCATACA...TAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAAGGGCTCACTTTGTCTaGTCCAGTGTCACAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKRAHFV*SSVTSP Trigger: CGGGCTTGTGACACTGGACCAGACAAAGTGAGCCCT...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| 3UTR CAA 72 bp | CAGAGGCCAAATGTTGTTGAAGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCTTTTCAACAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRPNVVEEPKRS*HEQRASFQQLK Trigger: CTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTCTAGCTTCCCATACTaGGCAGCCACAAACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDSSFPY*AATNRG Trigger: ACCTCTGTTTGTGGCTGCTCAGTATGGGAAGCTAGA...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTACAATTTACTTGCACAGAGGGGAACTaGATCCAAATACCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IFPFRNSETRGCQWLQFTCTEGN*IQIPST Trigger: TGTGCTTGGTATTTGGATTCAGTTCCCCTCTGTGCA...AGTAAATTGTAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR GCA 90 bp | TGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTTGGAAAGAAGCCTGGTaGAAGGAATTCCATCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CYFSCCLFHPTPSFLSGTWKEAW*KEFHPL Trigger: GAGTGGATGGAATTCCTTGCACCAGGCTTCTTTCCA...AGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACGTCTCAGCATTTCCCTaGAAAGAAGCCTGGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDVSAFP*KEAWCK Trigger: CTTGCACCAGGCTTCTTTCCAGGGAAATGCTGAGAC...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTTCCAAGGTCTCTGTATaGCCCATTTGTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTSKVSV*PICAAA Trigger: TGCTGCTGCACAAATGGGCCATACAGAGACCTTGGA...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | AACTTTGTCTTGGCTTGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTCGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NFVLACYFSCCLFHPTPSRRTRV*VSLCKI Trigger: GATTTTACAGAGGCTTACTCAGACACGTGTTCTACG...AGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACAAGCCAAGACAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGTCTAGCTTCCCATACTaGGCAGCCACAAACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLITKSKQSHKPSFVTKQSSFPY*AATNRG Trigger: ACCTCTGTTTGTGGCTGCTCAGTATGGGAAGCTAGA...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | GTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCTCCACACATTTTGTATaGCCCTCTTGTGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VTSLAAFSIQPHLSFQELSTHFV*PSCAAI Trigger: TATTGCTGCACAAGAGGGTCATACAAAATGTGTGGA...GAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTTGCACAGAGGGGAACTaGATCCAAATACCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTCTEGN*IQIPST Trigger: TGTGCTTGGTATTTGGATTCAGTTCCCCTCTGTGCA...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACCACAGCAAGATGCAATaGACAGAAGCCCTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDHSKMQ*TEALKR Trigger: ACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTG...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAACCCAAGAGCTGCTaGACAGCAGAATCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKQPKSC*TAESMG Trigger: ACCCATTGATTCTGCTGTGCAGCAGCTCTTGGGTTG...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACAGCCCAAGAGGAGTTTaGACGAACAGAGAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDSPRGV*TNREHL Trigger: AAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCT...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTACAATTTACTAAATCACAGTCCTTTTaGAAAGCCATGCACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFPFRNSETRGCQWLQFTKSQSF*KAMHRG Trigger: CCCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTT...AGTAAATTGTAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAATGCACAGAGGGGAACTaGATCCAAATACCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKCTEGN*IQIPST Trigger: TGTGCTTGGTATTTGGATTCAGTTCCCCTCTGTGCA...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACTGGGAAGTGGCAACTaGTGGATGAAAATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKLGSGN*WMKMSE Trigger: CTCTGACATTTTCATCCATCAGTTGCCACTTCCCAG...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCTCACCTAGAGTCTTCTGACCTAGGTAAATTCTTTTGTCTGCAGCTTAGCATTGTGATAAGCTaGTTCATGAATCGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPAHLESSDLGKFFCLQLSIVIS*FMNRHP Trigger: TGGATGCCGATTCATGAAGCAGCTTATCACAATGCT...AAGCTGCAGACAAAAGAATTTACCTAGGTCAGAAGACTCTAGGTGAGCTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR GCA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGCACAGCAAGATGCAATaGACAGAAGCCCTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: HLITKSKQSHKPSFVTKQHSKMQ*TEALKR Trigger: ACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTG...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGTGGAAAGAAGCCTGGTaGAAGGAATTCCATCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVWKEAW*KEFHPL Trigger: GAGTGGATGGAATTCCTTGCACCAGGCTTCTTTCCA...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTGCTTTATCCAAGGCTTaGCAATTGACATTTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CYFSCCLFHPTPSFLSGTALSKA*QLTFAP Trigger: TGGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGC...AGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | TTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGTCCAAGGTCTCTGTATaGCCCATTTGTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVRHYASFKGLSKCDQLSKVSV*PICAAA Trigger: TGCTGCTGCACAAATGGGCCATACAGAGACCTTGGA...CAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACAAATCACAGTCCTTTTaGAAAGCCATGCACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDKSQSF*KAMHRG Trigger: CCCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTT...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTCCAAACGACAAAGATaGGTTAGGCTTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDSKRQR*VRLGTE Trigger: CTCTGTTCCAAGCCTAACCCATCTTTGTCGTTTGGA...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTTCCAAACGACAAAGATaGGTTAGGCTTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTSKRQR*VRLGTE Trigger: CTCTGTTCCAAGCCTAACCCATCTTTGTCGTTTGGA...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCGCTCTGCTTTTAGACTaGCCCGAATTTCCAAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRHYASFKGLSKCDQLIALLLD*PEFPND Trigger: GTCGTTTGGAAATTCGGGCCAGTCTAAAAGCAGAGC...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAGCTCTGCTTTTAGACTaGCCCGAATTTCCAAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKALLLD*PEFPND Trigger: GTCGTTTGGAAATTCGGGCCAGTCTAAAAGCAGAGC...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKRRTRV*VSLCKI Trigger: GATTTTACAGAGGCTTACTCAGACACGTGTTCTACG...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGCTCACCTAGAGTCTTCTGACCTAGGTAAATTCTTTTGTCTGCAGCTTGACATTTGCACCAGATaGAATAAGTATGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPAHLESSDLGKFFCLQLDICTR*NKYAHA Trigger: AGCATGAGCATACTTATTTCATCTGGTGCAAATGTC...AAGCTGCAGACAAAAGAATTTACCTAGGTCAGAAGACTCTAGGTGAGCTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAGGCAGTATGCCAAGTaGAGTTCATTTAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLITKSKQSHKPSFVTKQRQYAK*SSFNWA Trigger: AGCCCAGTTAAATGAACTTCACTTGGCATACTGCCT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTATGAATTCAGATGTATaGTTCCAAGGTACCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CYFSCCLFHPTPSFLSGTMNSDV*FQGTIR Trigger: CCTGATGGTACCTTGGAATCATACATCTGAATTCAT...AGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | TGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCATCTTTTCAACAGCTaGAGGAAGTCTCTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CYFSCCLFHPTPSFLSGTHLFNS*RKSLPI Trigger: AATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATG...AGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR GCA 90 bp | AACTTTGTCTTGGCTTGTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTGCCCTCAAACGTCTTTaGCTTAATGTAGTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFVLACYFSCCLFHPTPSALKRL*LNVVFR Trigger: TCTGAAAACTACATTAAGGCAAAGACGTTTGAGGGC...AGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAACAAGCCAAGACAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR GCA 90 bp | GTTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTCACAGCAAGATGCAATaGACAGAAGCCCTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: VISKTLCFFQGLIKMRPAHSKMQ*TEALKR Trigger: ACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTG...AGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR GCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTGAGATGTGGCAACCATaGCTTGTATTTTGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTEMWQP*LVFCLC Trigger: GCACAAACAAAATACAAGGCATGGTTGCCACATCTC...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGCAACCCAAGAGCTGCTaGACAGCAGAATCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRQPKSC*TAESMG Trigger: ACCCATTGATTCTGCTGTGCAGCAGCTCTTGGGTTG...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCTCACCTAGAGTCTTCTGACCTAGGTAAATTCTTTTGTCTGCAGCTTCATCCACTCATAGAATaGGATCCATTGACATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPAHLESSDLGKFFCLQLHPLIE*DPLTFA Trigger: AGCAAATGTCAATGGATCCCATTCTATGAGTGGATG...AAGCTGCAGACAAAAGAATTTACCTAGGTCAGAAGACTCTAGGTGAGCTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGGTCTCAGCATTTCCCTaGAAAGAAGCCTGGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRVSAFP*KEAWCK Trigger: CTTGCACCAGGCTTCTTTCCAGGGAAATGCTGAGAC...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACTCCACACATTTTGTATaGCCCTCTTGTGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VRHYASFKGLSKCDQLIYSTHFV*PSCAAI Trigger: TATTGCTGCACAAGAGGGTCATACAAAATGTGTGGA...GTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR TCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACCATCTTTTCAACAGCTaGAGGAAGTCTCTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDHLFNS*RKSLPI Trigger: AATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATG...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTATGAAAATGTCAGAGTaGAGGTGCTCTGCTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTMKMSE*RCSAFR Trigger: TCTAAAAGCAGAGCACCTTCACTCTGACATTTTCAT...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACAATGTAGTTTTCAGATaGATCAGTGAGTCAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDNVVFR*ISESRD Trigger: GTCCCTTGACTCACTGATTCATCTGAAAACTACATT...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR GCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGAGCATTGTGATAAGCTaGTTCATGAATCGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVSIVIS*FMNRHP Trigger: TGGATGCCGATTCATGAAGCAGCTTATCACAATGCT...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTGCCCTCAAACGTCTTTaGCTTAATGTAGTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGHLITKSKQSHKPSFVTALKRL*LNVVFR Trigger: TCTGAAAACTACATTAAGGCAAAGACGTTTGAGGGC...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGCACAGCAAGATGCAATaGACAGAAGCCCTCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRHSKMQ*TEALKR Trigger: ACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTG...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTGTATGACCCTCTTGTaGAGCAATAAACAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDCMTLL*SNKQRS Trigger: ACTCCTTTGTTTATTGCTGCACAAGAGGGTCATACA...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAGCCCTTTGGTATTCTTaGCACAGAAACTATGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKALWYS*HRNYAQ Trigger: TTGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGC...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTACGCTTTATCCAAGGCTTaGCAATTGACATTTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VRHYASFKGLSKCDQLIYALSKA*QLTFAP Trigger: TGGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGC...GTAGATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGGCTTTATCCAAGGCTTaGCAATTGACATTTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVALSKA*QLTFAP Trigger: TGGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGC...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTCGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: CKNSQGSSILRSIFHPRSRRTRV*VSLCKI Trigger: GATTTTACAGAGGCTTACTCAGACACGTGTTCTACG...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR TCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGGACATTTGCACCAGATaGAATAAGTATGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVDICTR*NKYAHA Trigger: AGCATGAGCATACTTATTTCATCTGGTGCAAATGTC...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGGACATTTGCACCAGATaGAATAAGTATGCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLITKSKQSHKPSFVTKQDICTR*NKYAHA Trigger: AGCATGAGCATACTTATTTCATCTGGTGCAAATGTC...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATTCCACACATTTTGTATaGCCCTCTTGTGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LITKSKQSHKPSFVTKQNSTHFV*PSCAAI Trigger: TATTGCTGCACAAGAGGGTCATACAAAATGTGTGGA...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGAGGCAGTATGCCAAGTaGAGTTCATTTAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRRQYAK*SSFNWA Trigger: AGCCCAGTTAAATGAACTTCACTTGGCATACTGCCT...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAAAACTTCTCATACTTaGGGCAGTATGCCAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLITKSKQSHKPSFVTKQKTSHT*GSMPSE Trigger: TTCACTTGGCATACTGCCTCAAGTATGAGAAGTTTT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAATGAAAATGTCAGAGTaGAGGTGCTCTGCTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKMKMSE*RCSAFR Trigger: TCTAAAAGCAGAGCACCTTCACTCTGACATTTTCAT...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | CGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCTTCCAATTAGAAAATTTTCAGATGAATCAGTaGGTCAAGGGACAGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTESIFSTAEGSLFQLENFQMNQ*VKGQLY Trigger: ATACAGCTGTCCCTTGACTCACTGATTCATCTGAAA...ATTTTCTAATTGGAAGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR GCA 90 bp | GTTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTAGCATTGTGATAAGCTaGTTCATGAATCGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VISKTLCFFQGLIKMRPASIVIS*FMNRHP Trigger: TGGATGCCGATTCATGAAGCAGCTTATCACAATGCT...AGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCTGTATGACCCTCTTGTaGAGCAATAAACAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVRHYASFKGLSKCDQLICMTLL*SNKQRS Trigger: ACTCCTTTGTTTATTGCTGCACAAGAGGGTCATACA...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR GCA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATGAGATGTGGCAACCATaGCTTGTATTTTGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LITKSKQSHKPSFVTKQNEMWQP*LVFCLC Trigger: GCACAAACAAAATACAAGGCATGGTTGCCACATCTC...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | TATATCCTCACAAAACAAGACTTGAATGTAAAGATGAGCTTGTCTTCCCAATCAAGCCCAAGAGGAGTTTaGACGAACAGAGAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YILTKQDLNVKMSLSSQSSPRGV*TNREHL Trigger: AAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCT...TGATTGGGAAGACAAGCTCATCTTTACATTCAAGTCTTGTTTTGTGAGGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR GCA 90 bp | AACAATGGTGTAGTTTCTTCTAAAGTGGTTTCATTAGGATCAGCTCCAGCTTCCTTGCCACAGAAACTATaGTCAAGTACTGTTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NNGVVSSKVVSLGSAPASLPQKL*SSTVTT Trigger: AGTGGTAACAGTACTTGAGCATAGTTTCTGTGGCAA...GGAAGCTGGAGCTGATCCTAATGAAACCACTTTAGAAGAAACTACACCATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACATCCACTCATAGAATaGGATCCATTGACATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKHPLIE*DPLTFA Trigger: AGCAAATGTCAATGGATCCCATTCTATGAGTGGATG...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTAAATCACAGTCCTTTTaGAAAGCCATGCACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKNSQGSSILRSIFHPRSKSQSF*KAMHRG Trigger: CCCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTT...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| 3UTR CAA 72 bp | ACTCTAAAATTAAAGTTGGGCCTTGATCAGAGAACTTaGTCTTGGCTTGTTACTTCTCTTGCTGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKLKLGLDQRT*SWLVTSLAAFS Trigger: GGAAAAGGCAGCAAGAGAAGTAACAAGCCAAGACAAAGTTCTCTGATCAAGGCCCAACTTTAATTTTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | AAGATGAGCTTGTCTTCCCAATCAGTTATCAGTAAGACATTATGCTTCTTTCAACGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KMSLSSQSVISKTLCFFQRRTRV*VSLCKI Trigger: GATTTTACAGAGGCTTACTCAGACACGTGTTCTACG...TTGAAAGAAGCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR TCA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAACATTTGCTCCATGTTaGAGCAACAGCTTTAATACA | + |
|
Preference number: 4 (lower is better) Translates to: GHLITKSKQSHKPSFVTKTFAPC*SNSFNT Trigger: TGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGT...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACATTTGCTCCATGTTaGAGCAACAGCTTTAATACA | + |
|
Preference number: 4 (lower is better) Translates to: KHGHLITKSKQSHKPSFVTFAPC*SNSFNT Trigger: TGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGT...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATAAAACTTCTCATACTTaGGGCAGTATGCCAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LITKSKQSHKPSFVTKQNKTSHT*GSMPSE Trigger: TTCACTTGGCATACTGCCTCAAGTATGAGAAGTTTT...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATATGAATTCAGATGTATaGTTCCAAGGTACCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LITKSKQSHKPSFVTKQNMNSDV*FQGTIR Trigger: CCTGATGGTACCTTGGAATCATACATCTGAATTCAT...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAGGCTAGCCTGGACTACAAGAAAGACCAACAACAAGATAATCAATTCAGAGATGTGGCAACCATaGCTTGTATTTTGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRLAWTTRKTNNKIINSEMWQP*LVFCLC Trigger: GCACAAACAAAATACAAGGCATGGTTGCCACATCTC...TGAATTGATTATCTTGTTGTTGGTCTTTCTTGTAGTCCAGGCTAGCCTAAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CCA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATCATCCACTCATAGAATaGGATCCATTGACATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LITKSKQSHKPSFVTKQNHPLIE*DPLTFA Trigger: AGCAAATGTCAATGGATCCCATTCTATGAGTGGATG...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGAAAACTTCTCATACTTaGGGCAGTATGCCAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRKTSHT*GSMPSE Trigger: TTCACTTGGCATACTGCCTCAAGTATGAGAAGTTTT...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGTCACATCCAGCACCACATCAGAATTACAGTTTATTAGCAGAATAAAGCCAAAAGAATCTGTGTaGTTTTCCAATGTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEVTSSTTSELQFISRIKPKESV*FSNVLD Trigger: GTCAAGGACATTGGAAAATCACACAGATTCTTTTGG...CTTTATTCTGCTAATAAACTGTAATTCTGATGTGGTGCTGGATGTGACTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGACATTTGCTCCATGTTaGAGCAACAGCTTTAATACA | + |
|
Preference number: 4 (lower is better) Translates to: RKTNNKIINSQNFHPVHRTFAPC*SNSFNT Trigger: TGTATTAAAGCTGTTGCTTCAACATGGAGCAAATGT...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| 3UTR CAA 72 bp | ATCCTCACAAAACAAGACTTGAATGTAAAGATGAGCTaGTCTTCCCAATCAGTTATCAGTAAGACATTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILTKQDLNVKMS*SSQSVISKTLC Trigger: GCATAATGTCTTACTGATAACTGATTGGGAAGACAAGCTCATCTTTACATTCAAGTCTTGTTTTGTGAGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCTGGCTCAGACCTTGTTTGCCACAGTTCCCAGCTCACCTAGAGTCTTCCTTAGAATTTTAACATaGCCTTCTCTGGCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLAQTLFATVPSSPRVFLRILT*PSLAAS Trigger: ACTTGCTGCCAGAGAAGGCAATGTTAAAATTCTAAG...GAAGACTCTAGGTGAGCTGGGAACTGTGGCAAACAAGGTCTGAGCCAGCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTATCCAAGGCTTGGCAATaGACATTTGCACCAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SNPIFPFRNSETRGCQWLSKAWQ*TFAPDE Trigger: TTCATCTGGTGCAAATGTCAATTGCCAAGCCTTGGA...TAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTCTCTGTATGGCCCATTaGTGCAGCAGCATGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLFHPTPSFLSGTLKLVALCMAH*CSSMNR Trigger: CCTATTCATGCTGCTGCACAAATGGGCCATACAGAG...AGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | GTTACTTCTCTTGCTGCCTTTTCCATCCAACCCCATCTTTCCTTTCAGGAACTCGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VTSLAAFSIQPHLSFQELEPKRS*HEQRAS Trigger: AGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTC...GAGTTCCTGAAAGGAAAGATGGGGTTGGATGGAAAAGGCAGCAAGAGAAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTACTTCTTACCCAAATGTaGTTGAAGAGCCCAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNPIFPFRNSETRGCQWLLLTQM*LKSPRG Trigger: TCCTCTTGGGCTCTTCAACAACATTTGGGTAAGAAG...TAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACCCCATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTAAAAGTTCCACACATTTaGTATGACCCTCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPIFPFRNSETRGCQWLKVPHI*YDPLVQ Trigger: CTGCACAAGAGGGTCATACAAAATGTGTGGAACTTT...TAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGATGGGGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS TCA 90 bp | AACATTGCCTTCTCTGGCAGCAAGTCCAACCGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATCCATCCTTTTGATCAGTCTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NIAFSGSKSNRRTRV*VSLCKIHPFDQSTS Trigger: GCTGGTAGACTGATCAAAAGGATGGATTTTACAGAGGCTTACTCAGACACGTGTTCTACGGTTGGACTTGCTGCCAGAGAAGGCAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | ATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTACAATTTACTGATTCCAAAGTCATCTaGGCATTCTCTGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFPFRNSETRGCQWLQFTDSKVI*AFSVCS Trigger: GGAGCAGACAGAGAATGCCAAGATGACTTTGGAATC...AGTAAATTGTAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTCTCTGTATGGCCCATTaGTGCAGCAGCATGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHLITKSKQSHKPSFVTLCMAH*CSSMNR Trigger: CCTATTCATGCTGCTGCACAAATGGGCCATACAGAG...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SVRHYASFKGLSKCDQLIEPKRS*HEQRAS Trigger: AGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTC...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS TCA 90 bp | TGCACAGAAGCCCTCAAACGTCTTTGCCTTAATGTAGTTTTCAGATaGATCAGTGAGTCAAGGGACAGCTGTATAAGGAAGGACTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CTEALKRLCLNVVFR*ISESRDSCIRKDSS Trigger: ACTGGAGTCCTTCCTTATACAGCTGTCCCTTGACTCACTGATTCATCTGAAAACTACATTAAGGCAAAGACGTTTGAGGGCTTCTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTTCCTTTCAGGAACTCTGAAACTCGTGGCTGCCAGTGGCTACAATTTACTAGCTTTATCCAAGGCTaGGCAATTGACATTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: IFPFRNSETRGCQWLQFTSFIQG*AIDICT Trigger: GGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGCT...AGTAAATTGTAGCCACTGGCAGCCACGAGTTTCAGAGTTCCTGAAAGGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGCTCTGTATGGCCCATTaGTGCAGCAGCATGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHGHLITKSKQSHKPSFVLCMAH*CSSMNR Trigger: CCTATTCATGCTGCTGCACAAATGGGCCATACAGAG...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGCTCACCTAGAGTCTTCTGACCTAGGTAAATTCTTTTGTCTGCAGCTTAAAATCACAGTCCTTTaGGAAAGCCATGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPAHLESSDLGKFFCLQLKITVL*ESHAQR Trigger: CCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTTT...AAGCTGCAGACAAAAGAATTTACCTAGGTCAGAAGACTCTAGGTGAGCTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LITKSKQSHKPSFVTKQNEPKRS*HEQRAS Trigger: AGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTC...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACAGAGGCCAAATGTTGTaGAAGAGCCCAAGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDRGQML*KSPRGV Trigger: AACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCT...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | ACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACAACAGAGGCCAAATGTaGTTGAAGAGCCCAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWTFDHQIQTVTQAVFCDNRGQM*LKSPRG Trigger: TCCTCTTGGGCTCTTCAACAACATTTGGCCTCTGTT...GTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAAATAGTTCTGCAGACTTCTGGGAAGTGGCAACTGATGGATGAAAATGTCAGTGTGAACAGCCCTTaGGTATTCTTGCCACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EQIVLQTSGKWQLMDENVSVNSP*VFLPQK Trigger: TTTCTGTGGCAAGAATACCAAAGGGCTGTTCACACT...GACATTTTCATCCATCAGTTGCCACTTCCCAGAAGTCTGCAGAACTATTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGGATTCCAAAGTCATCTaGGCATTCTCTGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQDSKVI*AFSVCS Trigger: GGAGCAGACAGAGAATGCCAAGATGACTTTGGAATC...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAAGAGGCCAAATGTTGTaGAAGAGCCCAAGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHLITKSKQSHKPSFVTKRGQML*KSPRGV Trigger: AACTCCTCTTGGGCTCTTCAACAACATTTGGCCTCT...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAAATAGTTCTGCAGACTTCTGGGAAGTGGCAACTGATGGATGAAAATGTCCTTAGAATTTTAACATaGCCTTCTCTGGCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EQIVLQTSGKWQLMDENVLRILT*PSLAAS Trigger: ACTTGCTGCCAGAGAAGGCAATGTTAAAATTCTAAG...GACATTTTCATCCATCAGTTGCCACTTCCCAGAAGTCTGCAGAACTATTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGTCCAAGGCTTGGCAATaGACATTTGCACCAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQSKAWQ*TFAPDE Trigger: TTCATCTGGTGCAAATGTCAATTGCCAAGCCTTGGA...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAGCTTTATCCAAGGCTaGGCAATTGACATTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQSFIQG*AIDICT Trigger: GGTGCAAATGTCAATTGCCAAGCCTTGGATAAAGCT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAAAATCACAGTCCTTTaGGAAAGCCATGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQKITVL*ESHAQR Trigger: CCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTTT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GTTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTAACAGAGGCCAAATGTaGTTGAAGAGCCCAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VISKTLCFFQGLIKMRPANRGQM*LKSPRG Trigger: TCCTCTTGGGCTCTTCAACAACATTTGGCCTCTGTT...AGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CAA 90 bp | TCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTGATCAAAGATGGGTTAGGCTaGGAACAGAGGCCAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVRHYASFKGLSKCDQLIKDGLG*EQRPNV Trigger: AACATTTGGCCTCTGTTCCAAGCCTAACCCATCTTT...GATCAGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CAA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGAAAGATGGGTTAGGCTaGGAACAGAGGCCAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: KHGHLITKSKQSHKPSFVKDGLG*EQRPNV Trigger: AACATTTGGCCTCTGTTCCAAGCCTAACCCATCTTT...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAGCCCTTTGGTATTCTaGCCACAGAAACTATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQSPLVF*PQKLCS Trigger: TGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGCT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS-3UTR CAA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAAGTAAAATCCATCCTTTaGATCAGTCTACCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHLITKSKQSHKPSFVTKVKSIL*ISLPAG Trigger: GCCAGCTGGTAGACTGATCAAAAGGATGGATTTTAC...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203878.3 |
||
| CDS GCA 90 bp | AATCTGTGTGATTTTCCAATGTCCTTGACTCACAGCAAGATGCAATaGACAGAAGCCCTCAAACGTCTTTGCCTTAATGTAGTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLCDFPMSLTHSKMQ*TEALKRLCLNVVFR Trigger: TCTGAAAACTACATTAAGGCAAAGACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTGAGTCAAGGACATTGGAAAATCACACAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000117883.2 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTGATTCCAAAGTCATCTaGGCATTCTCTGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKNSQGSSILRSIFHPRSDSKVI*AFSVCS Trigger: GGAGCAGACAGAGAATGCCAAGATGACTTTGGAATC...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CAA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATTCCAAGGCTTGGCAATaGACATTTGCACCAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LITKSKQSHKPSFVTKQNSKAWQ*TFAPDE Trigger: TTCATCTGGTGCAAATGTCAATTGCCAAGCCTTGGA...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | CATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTTTTTGTATGACCCTCTaGTGCAGCAATAAACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHLITKSKQSHKPSFVTFCMTL*CSNKQR Trigger: CCTTTGTTTATTGCTGCACAAGAGGGTCATACAAAA...AGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | AAACATGGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGAAAGTTCCACACATTTaGTATGACCCTCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHGHLITKSKQSHKPSFVKVPHI*YDPLVQ Trigger: CTGCACAAGAGGGTCATACAAAATGTGTGGAACTTT...CACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCCATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GTTATCAGTAAGACATTATGCTTCTTTCAAGGGCTTATCAAAATGCGACCAGCTAAAATCACAGTCCTTTaGGAAAGCCATGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VISKTLCFFQGLIKMRPAKITVL*ESHAQR Trigger: CCTCTGTGCATGGCTTTCCAAAAGGACTGTGATTTT...AGCTGGTCGCATTTTGATAAGCCCTTGAAAGAAGCATAATGTCTTACTGATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGCTTAGAATTTTAACATaGCCTTCTCTGGCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQLRILT*PSLAAS Trigger: ACTTGCTGCCAGAGAAGGCAATGTTAAAATTCTAAG...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | GGACATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACTTAGAATTTTAACATaGCCTTCTCTGGCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHLITKSKQSHKPSFVTKLRILT*PSLAAS Trigger: ACTTGCTGCCAGAGAAGGCAATGTTAAAATTCTAAG...TTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGACCAACAACAAGATAATCAATTCACAGAATTTTCACCCAGTTCACAGGCTTACCCAAATGTTGTaGAAGAGCCCAAGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RKTNNKIINSQNFHPVHRLTQML*KSPRGV Trigger: AACTCCTCTTGGGCTCTTCAACAACATTTGGGTAAG...CCTGTGAACTGGGTGAAAATTCTGTGAATTGATTATCTTGTTGTTGGTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGACACTTCGGCCTTTTTaGAGCAATTTCCTTAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: HLITKSKQSHKPSFVTKQTLRPF*SNFLRI Trigger: AATTCTAAGGAAATTGCTCAAAAAAGGCCGAAGTGT...CTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000137306.8 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | TTGATCACCAAATCCAAACAGTCACACAAGCCGTCTTTTGTGACTAAACAGAATTTTTGTATGACCCTCTaGTGCAGCAATAAACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LITKSKQSHKPSFVTKQNFCMTL*CSNKQR Trigger: CCTTTGTTTATTGCTGCACAAGAGGGTCATACAAAA...ATTCTGTTTAGTCACAAAAGACGGCTTGTGTGACTGTTTGGATTTGGTGATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020551.13 ENSMUST00000203878.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAAAATTCACAAGGCAGTAGTATTCTGAGGTCCATATTTCATCCACGATCTAAAGTTCCACACATTTaGTATGACCCTCTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKNSQGSSILRSIFHPRSKVPHI*YDPLVQ Trigger: CTGCACAAGAGGGTCATACAAAATGTGTGGAACTTT...AGATCGTGGATGAAATATGGACCTCAGAATACTACTGCCTTGTGAATTTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020551.13 |
||
| CDS-3UTR CAA 90 bp | AGTTTTAGGCTAGCCTGGACTACAAGAAAGACCAACAACAAGATAATCAATTCATTTTGTATGACCCTCTaGTGCAGCAATAAACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRLAWTTRKTNNKIINSFCMTL*CSNKQR Trigger: CCTTTGTTTATTGCTGCACAAGAGGGTCATACAAAA...TGAATTGATTATCTTGTTGTTGGTCTTTCTTGTAGTCCAGGCTAGCCTAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS CCA 72 bp | CTCTGTAAAATCCATCCTTTTGATCAGTCTACCAGCTaGCCTCAGCGCCGCCCTTCCTCCTCCGTGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCKIHPFDQSTS*PQRRPSSSVSQ Trigger: CTGCGACACGGAGGAGGAAGGGCGGCGCTGAGGCCAGCTGGTAGACTGATCAAAAGGATGGATTTTACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203878.3 |
||
| CDS CAA 90 bp | GCTGTGCCTTCTTACCCAAATGTTGTTGAAGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCTTTTCAACAGCTGAAGGAAGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVPSYPNVVEEPKRS*HEQRASFQQLKEVS Trigger: AGAGACTTCCTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTCTTCAACAACATTTGGGTAAGAAGGCACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS CAA 90 bp | AGCTGTATAAGGAAGGACTCCAGTGTGAACAGCCCTTTGGTATTCTaGCCACAGAAACTATGCTCAAGTACTGTTACCACTCTAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCIRKDSSVNSPLVF*PQKLCSSTVTTLEA Trigger: GGCCTCTAGAGTGGTAACAGTACTTGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGCTGTTCACACTGGAGTCCTTCCTTATACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS CAA 90 bp | TCAAGGGACAGCTGTATAAGGAAGGACTCCAGTGTGAACAGCCCTTaGGTATTCTTGCCACAGAAACTATGCTCAAGTACTGTTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SRDSCIRKDSSVNSP*VFLPQKLCSSTVTT Trigger: AGTGGTAACAGTACTTGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGCTGTTCACACTGGAGTCCTTCCTTATACAGCTGTCCCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS TCA 72 bp | TTCTCTGGCAGCAAGTCCAACCGTAGAACACGTGTCTaGGTAAGCCTCTGTAAAATCCATCCTTTTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSGSKSNRRTRV*VSLCKIHPFDQ Trigger: CTGATCAAAAGGATGGATTTTACAGAGGCTTACTCAGACACGTGTTCTACGGTTGGACTTGCTGCCAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203878.3 |
||
| CDS CAA 72 bp | AGGAAGGACTCCAGTGTGAACAGCCCTTTGGTATTCTaGCCACAGAAACTATGCTCAAGTACTGTTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: RKDSSVNSPLVF*PQKLCSSTVTT Trigger: AGTGGTAACAGTACTTGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGCTGTTCACACTGGAGTCCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS CAA 72 bp | AGCTTCCAAAAGAATCTGTGTGATTTTCCAATGTCCTaGACTCACAGCAAGATGCAATGCACAGAAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFQKNLCDFPMS*THSKMQCTEAL Trigger: GAGGGCTTCTGTGCATTGCATCTTGCTGTGAGTCAAGGACATTGGAAAATCACACAGATTCTTTTGGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020551.13 ENSMUST00000117883.2 ENSMUST00000203878.3 |
||
| CDS CAA 72 bp | TCTTACCCAAATGTTGTTGAAGAGCCCAAGAGGAGTTaGCACGAACAGAGAGCATCTTTTCAACAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SYPNVVEEPKRS*HEQRASFQQLK Trigger: CTTCAGCTGTTGAAAAGATGCTCTCTGTTCGTGCAAACTCCTCTTGGGCTCTTCAACAACATTTGGGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117883.2 |
||
| CDS CAA 72 bp | AGCTGTATAAGGAAGGACTCCAGTGTGAACAGCCCTTaGGTATTCTTGCCACAGAAACTATGCTCAAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SCIRKDSSVNSP*VFLPQKLCSST Trigger: AGTACTTGAGCATAGTTTCTGTGGCAAGAATACCAAAGGGCTGTTCACACTGGAGTCCTTCCTTATACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||
| CDS TCA 72 bp | GCCCTCAAACGTCTTTGCCTTAATGTAGTTTTCAGATaGATCAGTGAGTCAAGGGACAGCTGTATAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALKRLCLNVVFR*ISESRDSCIRK Trigger: CTTCCTTATACAGCTGTCCCTTGACTCACTGATTCATCTGAAAACTACATTAAGGCAAAGACGTTTGAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137306.8 |
||