RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021200

Ensembl transcript IDs: ENSMUST00000021617.14, ENSMUST00000149431.2

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCTTGCCCAGACCAGCTCTCCCCTGGCCCCAGGTTGAAGGTCTCTaGCTATGGCCAGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTG +
Preference number: 1 (lower is better)
Translates to: TLPRPALPWPQVEGL*LWPEAERVCDPLTV
Trigger: CACTGTCAGCGGATCGCAGACCCGCTCTGCTTCTGGCCATAGCCAGAGACCTTCAACCTGGGGCCAGGGGAGAGCTGGTCTGGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR CCA 90 bp GAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTaGGCCACCTTGCCCAGACCAGCTCTCCCCTGGCCCCAGGTTGAA +
Preference number: 1 (lower is better)
Translates to: EGFLQVLQLKARIPA*ATLPRPALPWPQVE
Trigger: TTCAACCTGGGGCCAGGGGAGAGCTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR TCA 90 bp GAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGAAAGCTaGGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCC +
Preference number: 1 (lower is better)
Translates to: EIKYLGWASPSQPES*GSSEGFLQVLQLKA
Trigger: GGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGCTTTCAGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR TCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAAGGTCACACCTGTTCTaGCCCCAGGGGGTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSRSHLF*PQGVLD
Trigger: ATCCAGGACCCCCTGGGGTCAGAACAGGTGTGACCT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR TCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTAGGTCACACCTGTTCTaGCCCCAGGGGGTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPRSHLF*PQGVLD
Trigger: ATCCAGGACCCCCTGGGGTCAGAACAGGTGTGACCT...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTAGACCAGCTCTCCCCTaGCCCCAGGTTGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPRPALP*PQVEGL
Trigger: GAGACCTTCAACCTGGGGCCAGGGGAGAGCTGGTCT...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR TCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCGATCCGCTGACAGTGTaGAAGCAGAGGTTCCACGTC +
Preference number: 2 (lower is better)
Translates to: SEGFLQVLQLKARIPAWADPLTV*KQRFHV
Trigger: GACGTGGAACCTCTGCTTTCACACTGTCAGCGGATC...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR TCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCGATCCGCTGACAGTGTaGAAGCAGAGGTTCCACGTC +
Preference number: 2 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFDPLTV*KQRFHV
Trigger: GACGTGGAACCTCTGCTTTCACACTGTCAGCGGATC...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAGACCAGCTCTCCCCTaGCCCCAGGTTGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPRPALP*PQVEGL
Trigger: GAGACCTTCAACCTGGGGCCAGGGGAGAGCTGGTCT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR CCA 72 bp AGACCAGCTCTCCCCTGGCCCCAGGTTGAAGGTCTCTaGCTATGGCCAGAAGCAGAGCGGGTCTGCGATCCG +
Preference number: 3 (lower is better)
Translates to: RPALPWPQVEGL*LWPEAERVCDP
Trigger: CGGATCGCAGACCCGCTCTGCTTCTGGCCATAGCCAGAGACCTTCAACCTGGGGCCAGGGGAGAGCTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR TCA 72 bp AGCTCCAGCAAAGAACCAGCAAGGTCACACCTGTTCTaGCCCCAGGGGGTCCTGGATGCAGGCCACCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSSKEPARSHLF*PQGVLDAGHLG
Trigger: CCCCAGGTGGCCTGCATCCAGGACCCCCTGGGGTCAGAACAGGTGTGACCTTGCTGGTTCTTTGCTGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR TCA 72 bp CCAGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTaGAAGCAGAGGTTCCACGTCCACTCCCCACATCAG +
Preference number: 3 (lower is better)
Translates to: PEAERVCDPLTV*KQRFHVHSPHQ
Trigger: CTGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR CAA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTCCCCTGGCCCCAGGTaGAAGGTCTCTGGCTATGGC +
Preference number: 3 (lower is better)
Translates to: SEGFLQVLQLKARIPAWASPGPR*KVSGYG
Trigger: GCCATAGCCAGAGACCTTCAACCTGGGGCCAGGGGA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR TCA 72 bp TACTTGGGCTGGGCGTCTCCCTCGCAGCCTGAAAGCTaGGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: YLGWASPSQPES*GSSEGFLQVLQ
Trigger: CTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGCTTTCAGGCTGCGAGGGAGACGCCCAGCCCAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR CAA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTCCCCTGGCCCCAGGTaGAAGGTCTCTGGCTATGGC +
Preference number: 3 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPSPGPR*KVSGYG
Trigger: GCCATAGCCAGAGACCTTCAACCTGGGGCCAGGGGA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR-3UTR CAA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCCTGCCTGGGCCACCTaGCCCAGACCAGCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPPAWAT*PRPALP
Trigger: GGGGAGAGCTGGTCTGGGCAAGGTGGCCCAGGCAGG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGGGTGCGCGGGCCGGTaGGTTCTCGGGAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQGCAGR*VLGRRR
Trigger: CCTTCGTCTCCCGAGAACCCACCGGCCCGCGCACCC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCTAGGTGCAGCGGGCTaGTGCCGCTACGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRLGAAG*CRYGAR
Trigger: GCGTGCGCCGTAGCGGCATCAGCCCGCTGCACCTAG...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQVRRQP*RMATSR
Trigger: TCTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCCTAGGTGCAGCGGGCTaGTGCCGCTACGGCGCACGC +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWALGAAG*CRYGAR
Trigger: GCGTGCGCCGTAGCGGCATCAGCCCGCTGCACCTAG...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCGAACAGACCCAGGGGTaGGCGGGCCGGTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAEQTQG*AGRWVL
Trigger: GAGAACCCACCGGCCCGCGCACCCCTGGGTCTGTTC...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCCGCTCGGCCGCTAGGTaGAGCGGGCTGATGCCGCTA +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWARSAAR*SGLMPL
Trigger: TAGCGGCATCAGCCCGCTGCACCTAGCGGCCGAGCG...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTCCAGCACCGCGTCGTaGTTGCGCTCGGCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWASSTAS*LRSAAR
Trigger: CCTAGCGGCCGAGCGCAACCACGACGCGGTGCTGGA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCCAGGAGGACATCGATaGTGGGTCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFPGGHR*WVPPSG
Trigger: GCCGCTGGGCGGGACCCATCATCGATGTCCTCCTGG...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCGAACAGACCCAGGGGTaGGCGGGCCGGTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFEQTQG*AGRWVL
Trigger: GAGAACCCACCGGCCCGCGCACCCCTGGGTCTGTTC...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTCGCTCGGCCGCTAGGTaGAGCGGGCTGATGCCGCTA +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPRSAAR*SGLMPL
Trigger: TAGCGGCATCAGCCCGCTGCACCTAGCGGCCGAGCG...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp GATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCTCGGGAGCCAGAGGTaGGTTCACGTCGAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: DSYKFSSLRPGFLPGPPCLGSQR*VHVEAR
Trigger: GCGCGCTTCGACGTGAACGCACCTCTGGCTCCCGAG...GCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTCCAGCACCGCGTCGTaGTTGCGCTCGGCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFSSTAS*LRSAAR
Trigger: CCTAGCGGCCGAGCGCAACCACGACGCGGTGCTGGA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFVRRQP*RMATSR
Trigger: TCTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGTGGCTGGAAAGGCGGTaGGGTGAGTGGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQWLERR*GEWRCR
Trigger: CCTACATCGCCACTCACCCCACCGCCTTTCCAGCCA...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCAGAGATGTCAGGCTCTaGCCCCGCCTGGAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWARDVRL*PRLEQR
Trigger: TCGCTGCTCCAGGCGGGGGCAGAGCCTGACATCTCT...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTTCTTGGAGGCAACATaGAGGGGGAGCAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRFLEAT*RGSRPS
Trigger: GGACGGCCTGCTCCCCCTGCATGTTGCCTCCAAGAA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGTCCAGCTGCCCACTCTaGGCAGCCACAAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQSSCPL*AATNKG
Trigger: CCCTTTGTTTGTGGCTGCCCAGAGTGGGCAGCTGGA...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGCACGCGCGTGCGGCTaGTCACAGGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPARACG*SQAAAS
Trigger: AGATGCTGCTGCCTGTGACCAGCCGCACGCGCGTGC...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTAGGTCGCGGGGCGGGTaGGTGCGGCCCGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPRSRGG*VRPVAV
Trigger: TACGGCAACGGGCCGCACCCACCCGCCCCGCGACCT...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGTCACTAGGATCTCCATaGCCTCCAGGTCATTGCGGG +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQSLGSP*PPGHCG
Trigger: CCCGCAATGACCTGGAGGTCATGGAGATCCTAGTGA...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCACACTGGCCTGCGTGTTaGTGTCTGCACCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSHWPAC*CLHHAW
Trigger: CCAAGCATGGTGCAGACATCAACACGCAGGCCAGTG...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGCCGCCTCCGCGTTCTTaGGCTCACAGGCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQPPPRS*AHRLCK
Trigger: TTTACAAAGCCTGTGAGCGCAAGAACGCGGAGGCGG...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTTCTTGGAGGCAACATaGAGGGGGAGCAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAFLEAT*RGSRPS
Trigger: GGACGGCCTGCTCCCCCTGCATGTTGCCTCCAAGAA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCATGCTGTAGACATTCTTaGCCTCCACCTTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSCCRHS*PPPWPR
Trigger: GCGGGGCCAAGGTGGAGGCCAAGAATGTCTACAGCA...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTGCTGTAGACATTCTTaGCCTCCACCTTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRCCRHS*PPPWPR
Trigger: GCGGGGCCAAGGTGGAGGCCAAGAATGTCTACAGCA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCATCCAGCTGCCCACTCTaGGCAGCCACAAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSSSCPL*AATNKG
Trigger: CCCTTTGTTTGTGGCTGCCCAGAGTGGGCAGCTGGA...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCGCCTCCGCGTTCTTaGGCTCACAGGCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRPPPRS*AHRLCK
Trigger: TTTACAAAGCCTGTGAGCGCAAGAACGCGGAGGCGG...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGCGGTGGTTGGCGTCTaGGTTGTATCGCACCAATAT +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQAVVGV*VVSHQY
Trigger: ATATTGGTGCGATACAACGCAGACGCCAACCACCGC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAGCACTGTCACTGGCCTaGGTGTTGATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSALSLA*VLMSAP
Trigger: TGGTGCAGACATCAACACGCAGGCCAGTGACAGTGC...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTAGCACAGCTGCACGTTaGCCACATAGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRSTAAR*PHSPGG
Trigger: TCCTCCTGGACTATGTGGGCAACGTGCAGCTGTGCT...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTCAAAGCTGTCGATGTaGTCCTTCAGCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRSKLSM*SFSREH
Trigger: GTGCTCCCGGCTGAAGGAGCACATCGACAGCTTTGA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTAGGGGACCTGGAAGGTaGAGAGCCAGAGTGAAACAG +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRRGPGR*RARVKQ
Trigger: CTGTTTCACTCTGGCTCTGCACCTTCCAGGTCCCCT...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTGCTCGATGGCCATCTaGAGCAGCTCCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFCSMAI*SSSSSL
Trigger: GAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR CCA 90 bp GATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCTTCTGCATGACCCCTTaGAACAGACCCAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: DSYKFSSLRPGFLPGPPCFCMTP*NRPRGA
Trigger: CGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAA...GCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTTCTGCATGACCCCTTaGAACAGACCCAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAFCMTP*NRPRGA
Trigger: CGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTGCCAGCCCTCCTTGTTaGGCTCTGCAAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRASPPC*ALQDSS
Trigger: GGAAGAATCTTGCAGAGCCCAACAAGGAGGGCTGGC...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTTCTTGGCCTCCACCTTaGCCCCGCCACTCACTAGGA +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPSWPPP*PRHSLG
Trigger: TCCTAGTGAGTGGCGGGGCCAAGGTGGAGGCCAAGA...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTCTTGGCCTCCACCTTaGCCCCGCCACTCACTAGGA +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFSWPPP*PRHSLG
Trigger: TCCTAGTGAGTGGCGGGGCCAAGGTGGAGGCCAAGA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTCGATGTTGGCGCCATaGTCCAACAGCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRSMLAP*SNSSCM
Trigger: CATGCAGCTGCTGTTGGACCATGGCGCCAACATCGA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTGTAGGCGTCGATGTTaGCGCCATGGTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRCRRRC*RHGPTA
Trigger: TGCTGTTGGACCATGGCGCCAACATCGACGCCTACA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTAGGCGGTGGGGTGAGTaGCGATGTAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPRRWGE*RCRRRC
Trigger: ACATCGACGCCTACATCGCCACTCACCCCACCGCCT...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTCACTGGCCTGCGTGTTaGTGTCTGCACCATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPHWPAC*CLHHAW
Trigger: CCAAGCATGGTGCAGACATCAACACGCAGGCCAGTG...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTACTTCATGGCAAACATaGTGGTGGCTGGAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRTSWQT*WWLERR
Trigger: CCGCCTTTCCAGCCACCATCATGTTTGCCATGAAGT...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTCGGGAGACAGACTCGTaGAGTGCGGTCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPRETDS*SAVQPL
Trigger: CAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCG...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCACTGCGTGTTGATGTCTaGACCATGCTTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSLRVDV*TMLGQE
Trigger: TTCCTGGCCAAGCATGGTGCAGACATCAACACGCAG...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCACTTCATGCTCATTCTTaGTGGCCTCGTAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSLHAHS*WPRRGL
Trigger: CAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAG...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTCTCGGGAGCCAGAGGTaGGTTCACGTCGAAGCGCGC +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPLGSQR*VHVEAR
Trigger: GCGCGCTTCGACGTGAACGCACCTCTGGCTCCCGAG...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGACCTGGTCCATGGGTaGAAATGTCCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPDLVHG*KCPGWW
Trigger: CCACCAGCCAGGACATTTCCACCCATGGACCAGGTC...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTTGTCTGCACCATGCTTaGCCAGGAACCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPCLHHA*PGTSGP
Trigger: AGGCCCTGAGGTTCCTGGCCAAGCATGGTGCAGACA...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTCCGGTATTTTCCTATaGCCTTCCGAACCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWASGIFL*PSEPAA
Trigger: GGCTGCGGGTTCGGAAGGCCATAGGAAAATACCGGA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCATCTGGGAGGTCTTaGACAGGTTGCTGCTATACT +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRPSGRS*TGCCYT
Trigger: AGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGG...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGTCCCATCCTGGATCATaGTCTTCAAGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQSHPGS*SSRPLH
Trigger: ATGAAGAGGCCTTGAAGATCATGATCCAGGATGGGA...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGCCACAAACAAAGGGGTaGTGCTGTAGACATTCTTGG +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQPQTKG*CCRHSW
Trigger: CCAAGAATGTCTACAGCATCACCCCTTTGTTTGTGG...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGCCCCGAGTCTTGTCTaGCAGGCTCTGCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPAPSLV*QALLDG
Trigger: GCCATCGAGCAGAGCCTGGCAGACAAGACTCGGGGC...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCGCGGTGGTTGGCGTCTaGGTTGTATCGCACCAATAT +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAAVVGV*VVSHQY
Trigger: ATATTGGTGCGATACAACGCAGACGCCAACCACCGC...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTGGTCCAACAGCAGCTaGATGGTGCGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPWSNSS*MVRRQP
Trigger: CGGCTGCCTGCGCACCATGCAGCTGCTGTTGGACCA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCGGGTGCGCGGGCCGGTaGGTTCTCGGGAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPGCAGR*VLGRRR
Trigger: CCTTCGTCTCCCGAGAACCCACCGGCCCGCGCACCC...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTCGATGTTGGCGCCATaGTCCAACAGCAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFSMLAP*SNSSCM
Trigger: CATGCAGCTGCTGTTGGACCATGGCGCCAACATCGA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTTCCGGTATTTTCCTATaGCCTTCCGAACCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPSGIFL*PSEPAA
Trigger: GGCTGCGGGTTCGGAAGGCCATAGGAAAATACCGGA...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
3UTR CAA 72 bp AGGTTCCACGTCCACTCCCCACATCAGGTTCTCACTTaGGGTGAAGCTCCAGCAAAGAACCAGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RFHVHSPHQVLT*GEAPAKNQQGH
Trigger: GTGACCTTGCTGGTTCTTTGCTGGAGCTTCACCCAAAGTGAGAACCTGATGTGGGGAGTGGACGTGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCCAGGAGGACATCGATaGTGGGTCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPPGGHR*WVPPSG
Trigger: GCCGCTGGGCGGGACCCATCATCGATGTCCTCCTGG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCCATATTTCAGGTATCTaGTTAGCCTGCCGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAHISGI*LACREA
Trigger: CGCTTCCCGGCAGGCTAATCAGATACCTGAAATATG...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAAATGCTGTCTCTTCCTaGAGTGTGCGTTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSNAVSS*SVRWSM
Trigger: CATTGACCAACGCACACTGCAGGAAGAGACAGCATT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTAGGCGGTGGGGTGAGTaGCGATGTAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPRRWGE*RCRRRC
Trigger: ACATCGACGCCTACATCGCCACTCACCCCACCGCCT...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTGGCTGGAAAGGCGGTaGGGTGAGTGGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPWLERR*GEWRCR
Trigger: CCTACATCGCCACTCACCCCACCGCCTTTCCAGCCA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCATATTTCAGGTATCTaGTTAGCCTGCCGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFHISGI*LACREA
Trigger: CGCTTCCCGGCAGGCTAATCAGATACCTGAAATATG...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTCTCCTTGTTGGGCTCTaGAAGATTCTTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPLLVGL*KILPIL
Trigger: CAGGATGGGAAGAATCTTGCAGAGCCCAACAAGGAG...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCAATGCTGTCTCTTCCTaGAGTGTGCGTTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SEGFLQVLQLKARIPAWANAVSS*SVRWSM
Trigger: CATTGACCAACGCACACTGCAGGAAGAGACAGCATT...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGACAGACTCGTGCAGTaGGGTCCAGCCCCTGTTACA +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPDRLVQ*GPAPVT
Trigger: TGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTC...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCGGGAGACAGACTCGTaGAGTGCGGTCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPRETDS*SAVQPL
Trigger: CAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGCACTATTCTATAGTTaGCCTTCTTGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQALFYS*PSWRQH
Trigger: ATGTTGCCTCCAAGAAGGGCAACTATAGAATAGTGC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAAGATTCTTCCCATCCTaGATCATGATCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSRFFPS*IMIFKA
Trigger: GGCCTTGAAGATCATGATCCAGGATGGGAAGAATCT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTATAGTTGCCCTTCTTaGAGGCAACATGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFYSCPS*RQHAGG
Trigger: TCCCCCTGCATGTTGCCTCCAAGAAGGGCAACTATA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTCACTAGGATCTCCATaGCCTCCAGGTCATTGCGGG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPSLGSP*PPGHCG
Trigger: CCCGCAATGACCTGGAGGTCATGGAGATCCTAGTGA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAGAGATGTCAGGCTCTaGCCCCGCCTGGAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPRDVRL*PRLEQR
Trigger: TCGCTGCTCCAGGCGGGGGCAGAGCCTGACATCTCT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGCACTGTCACTGGCCTaGGTGTTGATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPALSLA*VLMSAP
Trigger: TGGTGCAGACATCAACACGCAGGCCAGTGACAGTGC...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTGCACTATTCTATAGTTaGCCTTCTTGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRALFYS*PSWRQH
Trigger: ATGTTGCCTCCAAGAAGGGCAACTATAGAATAGTGC...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGCCAGCCCTCCTTGTTaGGCTCTGCAAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPASPPC*ALQDSS
Trigger: GGAAGAATCTTGCAGAGCCCAACAAGGAGGGCTGGC...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTTGGTCAATGGTCCCTaGGTAGGCTTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPLVNGP*VGLLQD
Trigger: GTCCTGCAGCAAGCCTACCCAGGGACCATTGACCAA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTGTAGGCGTCGATGTTaGCGCCATGGTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPCRRRC*RHGPTA
Trigger: TGCTGTTGGACCATGGCGCCAACATCGACGCCTACA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTACTTCATGGCAAACATaGTGGTGGCTGGAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPTSWQT*WWLERR
Trigger: CCGCCTTTCCAGCCACCATCATGTTTGCCATGAAGT...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTCCTCCTCGCTCAGGCTaGTGTATAGGCTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPPPRSG*CIGCIP
Trigger: AGGAATACAGCCTATACAGCAGCCTGAGCGAGGAGG...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR GCA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTTGCTGCTATACTTCTaGATGACCCCTTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFLLLYF*MTPWNR
Trigger: TCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTGTTACAGCGGTGGTTaGCGTCTGCGTTGTATCGCA +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPCYSGG*RLRCIA
Trigger: TGCGATACAACGCAGACGCCAACCACCGCTGTAACA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTCATGCTCATTCTTGCTaGCCTCGTAGAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPHAHSC*PRRGLM
Trigger: CATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATG...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAGCACAGCTGCACGTTaGCCACATAGTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPSTAAR*PHSPGG
Trigger: TCCTCCTGGACTATGTGGGCAACGTGCAGCTGTGCT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCAAAGCTGTCGATGTaGTCCTTCAGCCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPSKLSM*SFSREH
Trigger: GTGCTCCCGGCTGAAGGAGCACATCGACAGCTTTGA...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCGAGACGAAGGGGACCTaGTCCATGGGTGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPETKGT*SMGGNV
Trigger: GACATTTCCACCCATGGACCAGGTCCCCTTCGTCTC...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTTGGTCAATGGTCCCTaGGTAGGCTTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPLVNGP*VGLLQD
Trigger: GTCCTGCAGCAAGCCTACCCAGGGACCATTGACCAA...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCTGCGTGTTGATGTCTaGACCATGCTTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPLRVDV*TMLGQE
Trigger: TTCCTGGCCAAGCATGGTGCAGACATCAACACGCAG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR GCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCTTCATGCTCATTCTTaGTGGCCTCGTAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPLHAHS*WPRRGL
Trigger: CAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCATGCTCATTCTTGCTaGCCTCGTAGAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPHAHSC*PRRGLM
Trigger: CATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAAACATGATGGTGGCTaGAAAGGCGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPKHDGG*KGGGVS
Trigger: ACTCACCCCACCGCCTTTCCAGCCACCATCATGTTT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR TCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCCCATCTGGGAGGTCTTaGACAGGTTGCTGCTATACT +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPPSGRS*TGCCYT
Trigger: AGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGG...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CCA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAGATTCTTCCCATCCTaGATCATGATCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPRFFPS*IMIFKA
Trigger: GGCCTTGAAGATCATGATCCAGGATGGGAAGAATCT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp GTCGTCCACGGGTGCGTCGTGGAAGCGGCCAGGTCGCGGGGCGGGTaGGTGCGGCCCGTTGCCGTACAGGCAGGAGAAGCAGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VVHGCVVEAARSRGG*VRPVAVQAGEAGLA
Trigger: GGCGAGCCCTGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 90 bp CCAGCACCGCGTCGTGGTTGCGCTCGGCCGCTAGGTGCAGCGGGCTaGTGCCGCTACGGCGCACGCGCGTGCGGCTGGTCACAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPRRGCARPLGAAG*CRYGARACGWSQAA
Trigger: TGCTGCCTGTGACCAGCCGCACGCGCGTGCGCCGTAGCGGCATCAGCCCGCTGCACCTAGCGGCCGAGCGCAACCACGACGCGGTGCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp CGTCGTGGAAGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGCCCGTTaGCGTACAGGCAGGAGAAGCAGGGCTCGCCATCGCAGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: RRGSGQVAGRVGAAR*RTGRRSRARHRSRG
Trigger: ACCTCGGCTGCGATGGCGAGCCCTGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp CAGAACTGCACCACGCTAGGTGCCTTGTCGTCCACGGGTGCGTCGTaGAAGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGCCCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: QNCTTLGALSSTGAS*KRPGRGAGGCGPLP
Trigger: CGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp GAGGCCTCAGCAGGGGTCGGGCCCCGAGTCTTGTCTGCCAGGCTCTaGTCGATGGCCATCTGGAGCAGCTCCTCCTCGCTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EASAGVGPRVLSARL*SMAIWSSSSSLRLL
Trigger: CAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCCTGGCAGACAAGACTCGGGGCCCGACCCCTGCTGAGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS GCA 90 bp CACTTCCGGGGCCGACAGGAACTCACAGAACTGCACCACGCTAGGTaGCTTGTCGTCCACGGGTGCGTCGTGGAAGCGGCCAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: HFRGRQELTELHHAR*LVVHGCVVEAARSR
Trigger: CCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTCGGCCCCGGAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp CCCGCCCAGCGGCTCACTTCCGGGGCCGACAGGAACTCACAGAACTaGACCACGCTAGGTGCCTTGTCGTCCACGGGTGCGTCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PAQRLTSGADRNSQN*TTLGALSSTGASWK
Trigger: CTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTCGGCCCCGGAAGTGAGCCGCTGGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp CCAGGGGTGCGCGGGCCGGTGGGTTCTCGGGAGACGAAGGGGACCTaGTCCATGGGTGGAAATGTCCTGGCTGGTGGTTGGTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PGVRGPVGSRETKGT*SMGGNVLAGGWSER
Trigger: CCTCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGACCAGGTCCCCTTCGTCTCCCGAGAACCCACCGGCCCGCGCACCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CCA 90 bp TTGGCGCCATGGTCCAACAGCAGCTGCATGGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAGAGGGCTGATGACATCGCGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LAPWSNSSCMVRRQP*RMATSRGLMTSRLG
Trigger: CCCCAACCGCGATGTCATCAGCCCTCTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCACCATGCAGCTGCTGTTGGACCATGGCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp CAGCAGGGGTCGGGCCCCGAGTCTTGTCTGCCAGGCTCTGCTCGATaGCCATCTGGAGCAGCTCCTCCTCGCTCAGGCTGCTGTATAGGC +
Preference number: 5 (lower is better)
Translates to: QQGSGPESCLPGSAR*PSGAAPPRSGCCIG
Trigger: GCCTATACAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCCTGGCAGACAAGACTCGGGGCCCGACCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CCA 90 bp TGCGCGGGCCGGTGGGTTCTCGGGAGACGAAGGGGACCTGGTCCATaGGTGGAAATGTCCTGGCTGGTGGTTGGTCTGAGAGGACGCGGA +
Preference number: 5 (lower is better)
Translates to: CAGRWVLGRRRGPGP*VEMSWLVVGLRGRG
Trigger: TCCGCGTCCTCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGACCAGGTCCCCTTCGTCTCCCGAGAACCCACCGGCCCGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS TCA 90 bp GGGAGCACAGCTGCACGTTGCCCACATAGTCCAGGAGGACATCGATaGTGGGTCCCGCCCAGCGGCTCACTTCCGGGGCCGACAGGAACT +
Preference number: 5 (lower is better)
Translates to: GSTAARCPHSPGGHR*WVPPSGSLPGPTGT
Trigger: AGTTCCTGTCGGCCCCGGAAGTGAGCCGCTGGGCGGGACCCATCATCGATGTCCTCCTGGACTATGTGGGCAACGTGCAGCTGTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp TGGCTGGAAAGGCGGTGGGGTGAGTGGCGATGTAGGCGTCGATGTTaGCGCCATGGTCCAACAGCAGCTGCATGGTGCGCAGGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: WLERRWGEWRCRRRC*RHGPTAAAWCAGSR
Trigger: ACGGCTGCCTGCGCACCATGCAGCTGCTGTTGGACCATGGCGCCAACATCGACGCCTACATCGCCACTCACCCCACCGCCTTTCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGAGCACCGCGTCGTGGTaGCGCTCGGCCGCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQSTASW*RSAARC
Trigger: GCACCTAGCGGCCGAGCGCAACCACGACGCGGTGCT...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp GTTCTCGGGAGACGAAGGGGACCTGGTCCATGGGTGGAAATGTCCTaGCTGGTGGTTGGTCTGAGAGGACGCGGAGGCCTCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: VLGRRRGPGPWVEMS*LVVGLRGRGGLSRG
Trigger: ACCCCTGCTGAGGCCTCCGCGTCCTCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGACCAGGTCCCCTTCGTCTCCCGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR CAA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGTCGGGCCCCGAGTCTaGTCTGCCAGGCTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQVGPRV*SARLCS
Trigger: CGAGCAGAGCCTGGCAGACAAGACTCGGGGCCCGAC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS TCA 90 bp CCGCGCCCGCCAGCAGCAACAGCTCGGTGGCGTACACATTGTTGTTaGCCACAGCGAAGTAGAGCGCAGAACTGCGGCGGTCCTCGTAGA +
Preference number: 5 (lower is better)
Translates to: PRPPAATARWRTHCC*PQRSRAQNCGGPRR
Trigger: TCTACGAGGACCGCCGCAGTTCTGCGCTCTACTTCGCTGTGGTCAACAACAATGTGTACGCCACCGAGCTGTTGCTGCTGGCGGGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp CTCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTaGGTTGTATCGCACCAATATCCTCACCGCCTCCGCGTTCTTGCG +
Preference number: 5 (lower is better)
Translates to: LVQCGPAPVTAVVGV*VVSHQYPHRLRVLA
Trigger: CGCAAGAACGCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp GTCGGGCCCCGAGTCTTGTCTGCCAGGCTCTGCTCGATGGCCATCTaGAGCAGCTCCTCCTCGCTCAGGCTGCTGTATAGGCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: VGPRVLSARLCSMAI*SSSSSLRLLYRLYS
Trigger: GGAATACAGCCTATACAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCCTGGCAGACAAGACTCGGGGCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CCA 90 bp CGGGAGACAGACTCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTaGTTGGCGTCTGCGTTGTATCGCACCAATATCCTCACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RETDSCSAVQPLLQR*LASALYRTNILTAS
Trigger: GGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp CCAGGGGTGCGCGGGCCGGTGGGTTCTCGGGAGACGAAGGGGACCTaGAAGGTGCAGAGCCAGAGTGAAACAGAGCAAAGTACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PGVRGPVGSRETKGT*KVQSQSETEQSTLH
Trigger: ATGCAGAGTACTTTGCTCTGTTTCACTCTGGCTCTGCACCTTCCAGGTCCCCTTCGTCTCCCGAGAACCCACCGGCCCGCGCACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149431.2
CDS TCA 90 bp CATTCTTGGCCTCCACCTTGGCCCCGCCACTCACTAGGATCTCCATaGCCTCCAGGTCATTGCGGGAGACAGACTCGTGCAGTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: HSWPPPWPRHSLGSP*PPGHCGRQTRAVRS
Trigger: GGACCGCACTGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCATGGAGATCCTAGTGAGTGGCGGGGCCAAGGTGGAGGCCAAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp ATAGCCGCCATCTGGGAGGTCTTGAACAGGTTGCTGCTATACTTCTaGATGACCCCTTGGAACAGACCCAGGGGTGCGCGGGCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: IAAIWEVLNRLLLYF*MTPWNRPRGARAGG
Trigger: CCCACCGGCCCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGGCGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp ACTAGGATCTCCATGACCTCCAGGTCATTGCGGGAGACAGACTCGTaGAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTGCG +
Preference number: 5 (lower is better)
Translates to: TRISMTSRSLRETDS*SAVQPLLQRWLASA
Trigger: CGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCATGGAGATCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp TGGGAGGTCTTGAACAGGTTGCTGCTATACTTCTGCATGACCCCTTaGAACAGACCCAGGGGTGCGCGGGCCGGTGGGTTCTCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: WEVLNRLLLYFCMTP*NRPRGARAGGFSGD
Trigger: GTCTCCCGAGAACCCACCGGCCCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp AGACAGACTCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTaGCGTCTGCGTTGTATCGCACCAATATCCTCACCGCCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: RQTRAVRSSPCYSGG*RLRCIAPISSPPPR
Trigger: ACGCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCAGCACCGCGTCGTGGTaGCGCTCGGCCGCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFSTASW*RSAARC
Trigger: GCACCTAGCGGCCGAGCGCAACCACGACGCGGTGCT...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp GATCTCCATGACCTCCAGGTCATTGCGGGAGACAGACTCGTGCAGTaGGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTGCGTTGTA +
Preference number: 5 (lower is better)
Translates to: DLHDLQVIAGDRLVQ*GPAPVTAVVGVCVV
Trigger: TACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCATGGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp CGGGAAGCGGCAGTGTGTCCAGGAGTTTTATCCGGTATTTTCCTATaGCCTTCCGAACCCGCAGCCGGCAGAGGTGAGCCAGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: REAAVCPGVLSGIFL*PSEPAAGRGEPEVS
Trigger: CGAGACCTCTGGCTCACCTCTGCCGGCTGCGGGTTCGGAAGGCCATAGGAAAATACCGGATAAAACTCCTGGACACACTGCCGCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGGTCCCTGGGTAGGCTaGCTGCAGGACTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQGPWVG*LQDFQA
Trigger: TGCCTGAAAGTCCTGCAGCAAGCCTACCCAGGGACC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 90 bp ATCCGGTATTTTCCTATGGCCTTCCGAACCCGCAGCCGGCAGAGGTaGGCCAGAGGTCTCGGAGGTTCTGCCTTCTCCTTGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: IRYFPMAFRTRSRQR*ARGLGGSAFSLMTA
Trigger: GGCTGTCATCAAGGAGAAGGCAGAACCTCCGAGACCTCTGGCTCACCTCTGCCGGCTGCGGGTTCGGAAGGCCATAGGAAAATACCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp GGCTCTGCTCGATGGCCATCTGGAGCAGCTCCTCCTCGCTCAGGCTaGTGTATAGGCTGTATTCCTCATGTCCGATGGCACGTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GSARWPSGAAPPRSG*CIGCIPHVRWHVVC
Trigger: GCAGACAACGTGCCATCGGACATGAGGAATACAGCCTATACAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCACTTCTGCATGACCCCTaGGAACAGACCCAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSLLHDP*EQTQGC
Trigger: GCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAG...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTTCTTGGCCTCCACCTaGGCCCCGCCACTCACTAGG +
Preference number: 5 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAFLAST*APPLTR
Trigger: CCTAGTGAGTGGCGGGGCCAAGGTGGAGGCCAAGAA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAATGTCTGCACCATGCTaGGCCAGGAACCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSMSAPC*ARNLRA
Trigger: GGCCCTGAGGTTCCTGGCCAAGCATGGTGCAGACAT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp GTAGGCAGCCTCGTGGAGCGGCAGCCAGCCCTCCTTGTTGGGCTCTaGAAGATTCTTCCCATCCTGGATCATGATCTTCAAGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VGSLVERQPALLVGL*KILPILDHDLQGLF
Trigger: GAAGAGGCCTTGAAGATCATGATCCAGGATGGGAAGAATCTTGCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTCCACGAGGCTGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAATGACCTCCAGGTCATaGCGGGAGACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSMTSRS*RETDSC
Trigger: GCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCAT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCTTCTTGGCCTCCACCTaGGCCCCGCCACTCACTAGG +
Preference number: 5 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFFLAST*APPLTR
Trigger: CCTAGTGAGTGGCGGGGCCAAGGTGGAGGCCAAGAA...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGTCACTGGCCTGCGTGTaGATGTCTGCACCATGCTTG +
Preference number: 5 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQSLACV*MSAPCL
Trigger: CAAGCATGGTGCAGACATCAACACGCAGGCCAGTGA...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAAGCAGGCCGTCCTTGTaGGCTTTGTTAGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSSRPSL*ALLASA
Trigger: CGCCGATGCTAACAAAGCCAACAAGGACGGCCTGCT...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCCCAGACCAGGGTTCTGCCTTCTCCTaGATGACAGCCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KFSSLRPGFLPGPPCPDQGSAFS*MTAQSS
Trigger: TGAGGACTGGGCTGTCATCAAGGAGAAGGCAGAACC...CTGGTCTGGGCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTTCTGCATGACCCCTaGGAACAGACCCAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFLLHDP*EQTQGC
Trigger: GCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAG...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCTCTTCATCCCCTTCCTaGATGGCCTTCAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: SEGFLQVLQLKARIPAWASSSPS*MAFSTG
Trigger: CCCCGTGCTGAAGGCCATCAAGGAAGGGGATGAAGA...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTAGCCAGCCCTCCTTGTaGGGCTCTGCAAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRSQPSL*GSARFF
Trigger: GAAGAATCTTGCAGAGCCCAACAAGGAGGGCTGGCT...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AGAAGCAGAGCGGGTCTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTTTCCTGCAGTGTGCGTaGGTCAATGGTCCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: RSRAGLRSADSVKAEVPRFLQCA*VNGPWV
Trigger: TACCCAGGGACCATTGACCAACGCACACTGCAGGAA...ACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAGACCCGCTCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp AGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCATGACCTCCAGGTCATaGCGGGAGACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: SEGFLQVLQLKARIPAWAMTSRS*RETDSC
Trigger: GCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCAT...GGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTATGTCTGCACCATGCTaGGCCAGGAACCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPMSAPC*ARNLRA
Trigger: GGCCCTGAGGTTCCTGGCCAAGCATGGTGCAGACAT...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp CGCCCTGAGAGAGAAGAAACTCTACCACGTCTTCATGCTCATTCTTaGTGGCCTCGTAGAGGGCTGATGCACTGTCACTGGCCTGCGTGT +
Preference number: 5 (lower is better)
Translates to: RPEREETLPRLHAHS*WPRRGLMHCHWPAC
Trigger: ACACGCAGGCCAGTGACAGTGCATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAGACGTGGTAGAGTTTCTTCTCTCTCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 90 bp GGCAGCCAGCCCTCCTTGTTGGGCTCTGCAAGATTCTTCCCATCCTaGATCATGATCTTCAAGGCCTCTTCATCCCCTTCCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GSQPSLLGSARFFPS*IMIFKASSSPSLMA
Trigger: GGCCATCAAGGAAGGGGATGAAGAGGCCTTGAAGATCATGATCCAGGATGGGAAGAATCTTGCAGAGCCCAACAAGGAGGGCTGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAGCCATCTGGGAGGTCTaGAACAGGTTGCTGCTATAC +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSAIWEV*NRLLLY
Trigger: GTATAGCAGCAACCTGTTCAAGACCTCCCAGATGGC...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCATCGGTGGCGTACACATaGTTGTTGACCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSSVAYT*LLTTAK
Trigger: CTTCGCTGTGGTCAACAACAATGTGTACGCCACCGA...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 90 bp CTCTACCACGTCTTCATGCTCATTCTTGCTGGCCTCGTAGAGGGCTaGTGCACTGTCACTGGCCTGCGTGTTGATGTCTGCACCATGCTT +
Preference number: 5 (lower is better)
Translates to: LYHVFMLILAGLVEG*CTVTGLRVDVCTML
Trigger: AAGCATGGTGCAGACATCAACACGCAGGCCAGTGACAGTGCATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAGACGTGGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 90 bp AGGGGGAGCAGGCCGTCCTTGTTGGCTTTGTTAGCATCGGCGCCCTaGGAGAGAAGAAACTCTACCACGTCTTCATGCTCATTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGSRPSLLALLASAP*ERRNSTTSSCSFLL
Trigger: CAGCAAGAATGAGCATGAAGACGTGGTAGAGTTTCTTCTCTCTCAGGGCGCCGATGCTAACAAAGCCAACAAGGACGGCCTGCTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGGGCCACCTTGCTCGGTGGCGTACACATaGTTGTTGACCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: DSYKFSSLRPGFLPGPPCSVAYT*LLTTAK
Trigger: CTTCGCTGTGGTCAACAACAATGTGTACGCCACCGA...GCAAGGTGGCCCAGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCGGTTCTGCCTTCTCCTaGATGACAGCCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFGSAFS*MTAQSS
Trigger: TGAGGACTGGGCTGTCATCAAGGAGAAGGCAGAACC...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 90 bp GTTCTCTGCATGTGGCCAGGTATAATGCTGTCTCTTCCTGCAGTGTaGGTTGGTCAATGGTCCCTGGGTAGGCTTGCTGCAGGACTTTCA +
Preference number: 5 (lower is better)
Translates to: VLCMWPGIMLSLPAV*VGQWSLGRLAAGLS
Trigger: TGAAAGTCCTGCAGCAAGCCTACCCAGGGACCATTGACCAACGCACACTGCAGGAAGAGACAGCATTATACCTGGCCACATGCAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp CTGCGATCCGCTGACAGTGTGAAAGCAGAGGTTCCACGTCCACTCCCCACATCAGAGGTCTTGAACAGGTaGCTGCTATACTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LRSADSVKAEVPRPLPTSEVLNR*LLYFCM
Trigger: CATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTC...TGATGTGGGGAGTGGACGTGGAACCTCTGCTTTCACACTGTCAGCGGATCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTGGTCCCTGGGTAGGCTaGCTGCAGGACTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPGPWVG*LQDFQA
Trigger: TGCCTGAAAGTCCTGCAGCAAGCCTACCCAGGGACC...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCCTGCCTGAGGTCTTGAACAGGTaGCTGCTATACTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: GPVRDSYKFSSLRPGFLPEVLNR*LLYFCM
Trigger: CATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTC...AGGCAGGAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTTTCCTGCAGTGTGCGTaGGTCAATGGTCCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPFLQCA*VNGPWV
Trigger: TACCCAGGGACCATTGACCAACGCACACTGCAGGAA...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp GCTGAGGGTCCAGTGAGGGATTCCTACAAGTTCTCCAGCTTAAGGCCAGGATTCAGGTCCATAAGGAACTaGAGTAACGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: AEGPVRDSYKFSSLRPGFRSIRN*SNDRHF
Trigger: GAAGTGCCTGTCGTTACTCAAGTTCCTTATGGACCT...GAATCCTGGCCTTAAGCTGGAGAACTTGTAGGAATCCCTCACTGGACCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCTTCATCCCCTTCCTaGATGGCCTTCAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPSSSPS*MAFSTG
Trigger: CCCCGTGCTGAAGGCCATCAAGGAAGGGGATGAAGA...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp TATACAACGTTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCAGCAGGCCGTCCTTGTaGGCTTTGTTAGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: YTTFIVLSEIKYLGWASPSRPSL*ALLASA
Trigger: CGCCGATGCTAACAAAGCCAACAAGGACGGCCTGCT...GGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAACGTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS-3UTR CAA 90 bp TTTATTGTGCTCAGTGAAATAAAATACTTGGGCTGGGCGTCTCCCTCGCAGCCTAGGTCCATAAGGAACTaGAGTAACGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: FIVLSEIKYLGWASPSQPRSIRN*SNDRHF
Trigger: GAAGTGCCTGTCGTTACTCAAGTTCCTTATGGACCT...AGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp AGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGCCCGTTaGCGTACAGGCAGGAGAAGCAGGGCTCGCCATCGC +
Preference number: 6 (lower is better)
Translates to: SGQVAGRVGAAR*RTGRRSRARHR
Trigger: GCGATGGCGAGCCCTGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp GCGTCGTGGAAGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGCCCGTaGCCGTACAGGCAGGAGAAGCAGGGCTCGCCATCGCAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: ASWKRPGRGAGGCGP*PYRQEKQGSPSQPR
Trigger: CCTCGGCTGCGATGGCGAGCCCTGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp CGTCGTGGTTGCGCTCGGCCGCTAGGTGCAGCGGGCTaGTGCCGCTACGGCGCACGCGCGTGCGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: RRGCARPLGAAG*CRYGARACGWS
Trigger: TGACCAGCCGCACGCGCGTGCGCCGTAGCGGCATCAGCCCGCTGCACCTAGCGGCCGAGCGCAACCACGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp GTCCTCGTAGAGGCGGGCGCGCTCGGGAGCCAGAGGTaGGTTCACGTCGAAGCGCGCGGCCAGCAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: VLVEAGALGSQR*VHVEARGQQRL
Trigger: GAGGCGCTGCTGGCCGCGCGCTTCGACGTGAACGCACCTCTGGCTCCCGAGCGCGCCCGCCTCTACGAGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp AAGCGCGCGGCCAGCAGCGCCTCCAGCACCGCGTCGTaGTTGCGCTCGGCCGCTAGGTGCAGCGGGCTGATG +
Preference number: 6 (lower is better)
Translates to: KRAASSASSTAS*LRSAARCSGLM
Trigger: CATCAGCCCGCTGCACCTAGCGGCCGAGCGCAACCACGACGCGGTGCTGGAGGCGCTGCTGGCCGCGCGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp GGGTGCGTCGTGGAAGCGGCCAGGTCGCGGGGCGGGTaGGTGCGGCCCGTTGCCGTACAGGCAGGAGAAGCA +
Preference number: 6 (lower is better)
Translates to: GCVVEAARSRGG*VRPVAVQAGEA
Trigger: TGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp ACCACGCTAGGTGCCTTGTCGTCCACGGGTGCGTCGTaGAAGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: TTLGALSSTGAS*KRPGRGAGGCG
Trigger: GCCGCACCCACCCGCCCCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp AAGCGGCCAGGTCGCGGGGCGGGTGGGTGCGGCCCGTaGCCGTACAGGCAGGAGAAGCAGGGCTCGCCATCG +
Preference number: 6 (lower is better)
Translates to: KRPGRGAGGCGP*PYRQEKQGSPS
Trigger: CGATGGCGAGCCCTGCTTCTCCTGCCTGTACGGCAACGGGCCGCACCCACCCGCCCCGCGACCTGGCCGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp GAACTGCACCACGCTAGGTGCCTTGTCGTCCACGGGTaGGTCGTGGAAGCGGCCAGGTCGCGGGGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: ELHHARCLVVHG*VVEAARSRGGW
Trigger: CCACCCGCCCCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp CAGCCGTGGCGGATGGCCACGAGCAGAGGGCTGATGACATCGCGGTaGGGGTCCGCGCCCGCCAGCAGCAACAGCTCGGTGGCGTACACA +
Preference number: 6 (lower is better)
Translates to: QPWRMATSRGLMTSR*GSAPASSNSSVAYT
Trigger: TGTGTACGCCACCGAGCTGTTGCTGCTGGCGGGCGCGGACCCCAACCGCGATGTCATCAGCCCTCTGCTCGTGGCCATCCGCCACGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp TCCGGGGCCGACAGGAACTCACAGAACTGCACCACGCTAGGTGCCTaGTCGTCCACGGGTGCGTCGTGGAAGCGGCCAGGTCGCGGGGCG +
Preference number: 6 (lower is better)
Translates to: SGADRNSQNCTTLGA*SSTGASWKRPGRGA
Trigger: CGCCCCGCGACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTCGGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp CGGATGGCCACGAGCAGAGGGCTGATGACATCGCGGTaGGGGTCCGCGCCCGCCAGCAGCAACAGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: RMATSRGLMTSR*GSAPASSNSSV
Trigger: CACCGAGCTGTTGCTGCTGGCGGGCGCGGACCCCAACCGCGATGTCATCAGCCCTCTGCTCGTGGCCATCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp GTCCATGGGTGGAAATGTCCTGGCTGGTGGTTGGTCTaGGAGGACGCGGAGGCCTCAGCAGGGGTCGGGCCC +
Preference number: 6 (lower is better)
Translates to: VHGWKCPGWWLV*EDAEASAGVGP
Trigger: GGGCCCGACCCCTGCTGAGGCCTCCGCGTCCTCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS TCA 72 bp GCTGCACGTTGCCCACATAGTCCAGGAGGACATCGATaGTGGGTCCCGCCCAGCGGCTCACTTCCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: AARCPHSPGGHR*WVPPSGSLPGP
Trigger: CGGCCCCGGAAGTGAGCCGCTGGGCGGGACCCATCATCGATGTCCTCCTGGACTATGTGGGCAACGTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp TCGGGCCCCGAGTCTTGTCTGCCAGGCTCTGCTCGATaGCCATCTGGAGCAGCTCCTCCTCGCTCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SGPESCLPGSAR*PSGAAPPRSGC
Trigger: GCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCCTGGCAGACAAGACTCGGGGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS GCA 72 bp GGCCGACAGGAACTCACAGAACTGCACCACGCTAGGTaGCTTGTCGTCCACGGGTGCGTCGTGGAAGCGGCC +
Preference number: 6 (lower is better)
Translates to: GRQELTELHHAR*LVVHGCVVEAA
Trigger: GGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp CGGCTCACTTCCGGGGCCGACAGGAACTCACAGAACTaGACCACGCTAGGTGCCTTGTCGTCCACGGGTGCG +
Preference number: 6 (lower is better)
Translates to: RLTSGADRNSQN*TTLGALSSTGA
Trigger: CGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTCGGCCCCGGAAGTGAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp TGGTCCAACAGCAGCTGCATGGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAGAGGGCTGATGACATCG +
Preference number: 6 (lower is better)
Translates to: WSNSSCMVRRQP*RMATSRGLMTS
Trigger: CGATGTCATCAGCCCTCTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCACCATGCAGCTGCTGTTGGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp GACCTCCAGGTCATTGCGGGAGACAGACTCGTGCAGTaGGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTC +
Preference number: 6 (lower is better)
Translates to: DLQVIAGDRLVQ*GPAPVTAVVGV
Trigger: GACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp AGGCGGTGGGGTGAGTGGCGATGTAGGCGTCGATGTTaGCGCCATGGTCCAACAGCAGCTGCATGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: RRWGEWRCRRRC*RHGPTAAAWCA
Trigger: TGCGCACCATGCAGCTGCTGTTGGACCATGGCGCCAACATCGACGCCTACATCGCCACTCACCCCACCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp GAGACAGACTCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTaGGCGTCTGCGTTGTATCGCACCAATATCCTCACCGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: ETDSCSAVQPLLQRW*ASALYRTNILTASA
Trigger: CGCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp TGCGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTaGGTTGTATCGCACCAATATCCTCACCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: CGPAPVTAVVGV*VVSHQYPHRLR
Trigger: GCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp AGACGAAGGGGACCTGGTCCATGGGTGGAAATGTCCTaGCTGGTGGTTGGTCTGAGAGGACGCGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RRRGPGPWVEMS*LVVGLRGRGGL
Trigger: GAGGCCTCCGCGTCCTCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGACCAGGTCCCCTTCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CAA 72 bp GACAGGAACTCACAGAACTGCACCACGCTAGGTGCCTaGTCGTCCACGGGTGCGTCGTGGAAGCGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: DRNSQNCTTLGA*SSTGASWKRPG
Trigger: ACCTGGCCGCTTCCACGACGCACCCGTGGACGACAAGGCACCTAGCGTGGTGCAGTTCTGTGAGTTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp CTGGGAGGTCTTGAACAGGTTGCTGCTATACTTCTGCATGACCCCTaGGAACAGACCCAGGGGTGCGCGGGCCGGTGGGTTCTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: LGGLEQVAAILLHDP*EQTQGCAGRWVLGR
Trigger: TCTCCCGAGAACCCACCGGCCCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp TGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTGCGTaGTATCGCACCAATATCCTCACCGCCTCCGCGTTCTTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: CSAVQPLLQRWLASA*YRTNILTASAFLRS
Trigger: TGAGCGCAAGAACGCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp CCTCCACCTTGGCCCCGCCACTCACTAGGATCTCCATaGCCTCCAGGTCATTGCGGGAGACAGACTCGTGCA +
Preference number: 6 (lower is better)
Translates to: PPPWPRHSLGSP*PPGHCGRQTRA
Trigger: TGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCATGGAGATCCTAGTGAGTGGCGGGGCCAAGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp TCCATGACCTCCAGGTCATTGCGGGAGACAGACTCGTaGAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SMTSRSLRETDS*SAVQPLLQRWL
Trigger: CAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTCTGTCTCCCGCAATGACCTGGAGGTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp CGAGTCTTGTCTGCCAGGCTCTGCTCGATGGCCATCTaGAGCAGCTCCTCCTCGCTCAGGCTGCTGTATAGG +
Preference number: 6 (lower is better)
Translates to: RVLSARLCSMAI*SSSSSLRLLYR
Trigger: CCTATACAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCGAGCAGAGCCTGGCAGACAAGACTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CCA 72 bp CGGTGGGTTCTCGGGAGACGAAGGGGACCTGGTCCATaGGTGGAAATGTCCTGGCTGGTGGTTGGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: RWVLGRRRGPGP*VEMSWLVVGLR
Trigger: TCTCAGACCAACCACCAGCCAGGACATTTCCACCCATGGACCAGGTCCCCTTCGTCTCCCGAGAACCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CCA 72 bp CGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTTaGCGTCTGCGTTGTATCGCACCAATATCCTCACCG +
Preference number: 6 (lower is better)
Translates to: RAVRSSPCYSGG*RLRCIAPISSP
Trigger: CGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp GTCCAGCCCCTGTTACAGCGGTGGTTGGCGTCTGCGTaGTATCGCACCAATATCCTCACCGCCTCCGCGTTC +
Preference number: 6 (lower is better)
Translates to: VQPLLQRWLASA*YRTNILTASAF
Trigger: GAACGCGGAGGCGGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp TGGAGTCTCCCTGGATTTGTTAGAGATGTCAGGCTCTaGCCCCGCCTGGAGCAGCGACAGGAGGCAATCCAG +
Preference number: 6 (lower is better)
Translates to: WSLPGFVRDVRL*PRLEQRQEAIQ
Trigger: CTGGATTGCCTCCTGTCGCTGCTCCAGGCGGGGGCAGAGCCTGACATCTCTAACAAATCCAGGGAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp TCCTTGATGACAGCCCAGTCCTCAAAGCTGTCGATGTaGTCCTTCAGCCGGGAGCACAGCTGCACGTTGCCC +
Preference number: 6 (lower is better)
Translates to: SLMTAQSSKLSM*SFSREHSCTLP
Trigger: GGGCAACGTGCAGCTGTGCTCCCGGCTGAAGGAGCACATCGACAGCTTTGAGGACTGGGCTGTCATCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp TTGAACAGGTTGCTGCTATACTTCTGCATGACCCCTTaGAACAGACCCAGGGGTGCGCGGGCCGGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: LNRLLLYFCMTP*NRPRGARAGGF
Trigger: GAACCCACCGGCCCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp GACTCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTaGTTGGCGTCTGCGTTGTATCGCACCAATATCCTC +
Preference number: 6 (lower is better)
Translates to: DSCSAVQPLLQR*LASALYRTNIL
Trigger: GAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp CTTGAACAGGTTGCTGCTATACTTCTGCATGACCCCTaGGAACAGACCCAGGGGTGCGCGGGCCGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: LEQVAAILLHDP*EQTQGCAGRWV
Trigger: AACCCACCGGCCCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp TCGTGCAGTGCGGTCCAGCCCCTGTTACAGCGGTGGTaGGCGTCTGCGTTGTATCGCACCAATATCCTCACC +
Preference number: 6 (lower is better)
Translates to: SCSAVQPLLQRW*ASALYRTNILT
Trigger: GGTGAGGATATTGGTGCGATACAACGCAGACGCCAACCACCGCTGTAACAGGGGCTGGACCGCACTGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp CCAGCAGCAACAGCTCGGTGGCGTACACATTGTTGTTaGCCACAGCGAAGTAGAGCGCAGAACTGCGGCGGT +
Preference number: 6 (lower is better)
Translates to: PAATARWRTHCC*PQRSRAQNCGG
Trigger: ACCGCCGCAGTTCTGCGCTCTACTTCGCTGTGGTCAACAACAATGTGTACGCCACCGAGCTGTTGCTGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp CGATGGCCATCTGGAGCAGCTCCTCCTCGCTCAGGCTaGTGTATAGGCTGTATTCCTCATGTCCGATGGCAC +
Preference number: 6 (lower is better)
Translates to: RWPSGAAPPRSG*CIGCIPHVRWH
Trigger: GTGCCATCGGACATGAGGAATACAGCCTATACAGCAGCCTGAGCGAGGAGGAGCTGCTCCAGATGGCCATCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS GCA 72 bp CGGTGGGTTCTCGGGAGACGAAGGGGACCTGGAAGGTaGAGAGCCAGAGTGAAACAGAGCAAAGTACTCTGC +
Preference number: 6 (lower is better)
Translates to: RWVLGRRRGPGR*RARVKQSKVLC
Trigger: GCAGAGTACTTTGCTCTGTTTCACTCTGGCTCTGCACCTTCCAGGTCCCCTTCGTCTCCCGAGAACCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149431.2
CDS CCA 72 bp TGTCTCTTCCTGCAGTGTGCGTTGGTCAATGGTCCCTaGGTAGGCTTGCTGCAGGACTTTCAGGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: CLFLQCALVNGP*VGLLQDFQAAQ
Trigger: CTGGGCTGCCTGAAAGTCCTGCAGCAAGCCTACCCAGGGACCATTGACCAACGCACACTGCAGGAAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp ATCTGGGAGGTCTTGAACAGGTTGCTGCTATACTTCTaGATGACCCCTTGGAACAGACCCAGGGGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: IWEVLNRLLLYF*MTPWNRPRGAR
Trigger: CCGCGCACCCCTGGGTCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp GCAGTGTGTCCAGGAGTTTTATCCGGTATTTTCCTATaGCCTTCCGAACCCGCAGCCGGCAGAGGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: AVCPGVLSGIFL*PSEPAAGRGEP
Trigger: TGGCTCACCTCTGCCGGCTGCGGGTTCGGAAGGCCATAGGAAAATACCGGATAAAACTCCTGGACACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp CAGGAGAAGCAGGGCTCGCCATCGCAGCCGAGGTCCATAAGGAACTaGAGTAACGACAGGCACTTCATGGCAAACATGATGGTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: QEKQGSPSQPRSIRN*SNDRHFMANMMVAG
Trigger: TCCAGCCACCATCATGTTTGCCATGAAGTGCCTGTCGTTACTCAAGTTCCTTATGGACCTCGGCTGCGATGGCGAGCCCTGCTTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp GTCTTCATGCTCATTCTTGCTGGCCTCGTAGAGGGCTaGTGCACTGTCACTGGCCTGCGTGTTGATGTCTGC +
Preference number: 6 (lower is better)
Translates to: VFMLILAGLVEG*CTVTGLRVDVC
Trigger: GCAGACATCAACACGCAGGCCAGTGACAGTGCATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp TGTATCGCACCAATATCCTCACCGCCTCCGCGTTCTTaGGCTCACAGGCTTTGTAAAGTGGAGTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: CIAPISSPPPRS*AHRLCKVESPW
Trigger: CCAGGGAGACTCCACTTTACAAAGCCTGTGAGCGCAAGAACGCGGAGGCGGTGAGGATATTGGTGCGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp TCAGGCTGCTGTATAGGCTGTATTCCTCATGTCCGATaGCACGTTGTCTGCCCCGAGTGGAGATCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: SGCCIGCIPHVR*HVVCPEWRSQS
Trigger: CGACTGAGATCTCCACTCGGGGCAGACAACGTGCCATCGGACATGAGGAATACAGCCTATACAGCAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021617.14
CDS CAA 72 bp TTCAGCACGGGGTCCATAGCCGCCATCTGGGAGGTCTaGAACAGGTTGCTGCTATACTTCTGCATGACCCCT +
Preference number: 6 (lower is better)
Translates to: FSTGSIAAIWEV*NRLLLYFCMTP
Trigger: AGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGGCGGCTATGGACCCCGTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 90 bp TTGATGGCCTTCAGCACGGGGTCCATAGCCGCCATCTGGGAGGTCTaGAACAGGTTGCTGCTATACTTCTGCATGACCCCTTGGAACAGA +
Preference number: 6 (lower is better)
Translates to: LMAFSTGSIAAIWEV*NRLLLYFCMTPWNR
Trigger: TCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGGCGGCTATGGACCCCGTGCTGAAGGCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp ATGTGGCCAGGTATAATGCTGTCTCTTCCTGCAGTGTaGGTTGGTCAATGGTCCCTGGGTAGGCTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: MWPGIMLSLPAV*VGQWSLGRLAA
Trigger: TGCAGCAAGCCTACCCAGGGACCATTGACCAACGCACACTGCAGGAAGAGACAGCATTATACCTGGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp CGCCTCCGCGTTCTTGCGCTCACAGGCTTTGTAAAGTaGAGTCTCCCTGGATTTGTTAGAGATGTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: RLRVLALTGFVK*SLPGFVRDVRL
Trigger: GAGCCTGACATCTCTAACAAATCCAGGGAGACTCCACTTTACAAAGCCTGTGAGCGCAAGAACGCGGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp GGGTCCATAGCCGCCATCTGGGAGGTCTTGAACAGGTaGCTGCTATACTTCTGCATGACCCCTTGGAACAGA +
Preference number: 6 (lower is better)
Translates to: GSIAAIWEVLNR*LLYFCMTPWNR
Trigger: TCTGTTCCAAGGGGTCATGCAGAAGTATAGCAGCAACCTGTTCAAGACCTCCCAGATGGCGGCTATGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CAA 72 bp CAGGGCTCGCCATCGCAGCCGAGGTCCATAAGGAACTaGAGTAACGACAGGCACTTCATGGCAAACATGATG +
Preference number: 6 (lower is better)
Translates to: QGSPSQPRSIRN*SNDRHFMANMM
Trigger: CATCATGTTTGCCATGAAGTGCCTGTCGTTACTCAAGTTCCTTATGGACCTCGGCTGCGATGGCGAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS TCA 72 bp AGGCCGTCCTTGTTGGCTTTGTTAGCATCGGCGCCCTaGGAGAGAAGAAACTCTACCACGTCTTCATGCTCA +
Preference number: 6 (lower is better)
Translates to: RPSLLALLASAP*ERRNSTTSSCS
Trigger: TGAGCATGAAGACGTGGTAGAGTTTCTTCTCTCTCAGGGCGCCGATGCTAACAAAGCCAACAAGGACGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS CCA 72 bp GAAGAAACTCTACCACGTCTTCATGCTCATTCTTGCTaGCCTCGTAGAGGGCTGATGCACTGTCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: EETLPRLHAHSC*PRRGLMHCHWP
Trigger: AGGCCAGTGACAGTGCATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAGACGTGGTAGAGTTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2
CDS GCA 72 bp AGAGAAGAAACTCTACCACGTCTTCATGCTCATTCTTaGTGGCCTCGTAGAGGGCTGATGCACTGTCACTGG +
Preference number: 6 (lower is better)
Translates to: REETLPRLHAHS*WPRRGLMHCHW
Trigger: CCAGTGACAGTGCATCAGCCCTCTACGAGGCCAGCAAGAATGAGCATGAAGACGTGGTAGAGTTTCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021617.14
ENSMUST00000149431.2