Pregenerated sensors for ASB18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067081Ensembl transcript IDs: ENSMUST00000086882.8, ENSMUST00000097656.10, ENSMUST00000151330.2, ENSMUST00000154228.8, ENSMUST00000238685.2
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACGCTCTCCTTGCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTGTGTGCCAAGGCGAAGAGAGACCTG | + |
Preference number: 1 (lower is better) Translates to: TLSLPKSFRIVQRQR*CRQRGVCAKAKRDL Trigger: CAGGTCTCTCTTCGCCTTGGCACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGCAAGGAGAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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3UTR CCA 90 bp | CTGAGCAGGGGGTCTGCTATGCTCTGGGTACAGTTTCTCTCCAAGTaGCTTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAG | + |
Preference number: 1 (lower is better) Translates to: LSRGSAMLWVQFLSK*LGSRRDGSLSCKSK Trigger: CTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAAGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCCCCTGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 90 bp | GGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATaGCTGGCCATAGCTGCTTCTGTCTCCTGGGTGGGGCGTTTTGTT | + |
Preference number: 1 (lower is better) Translates to: GRMGWARKDKQALGL*LAIAASVSWVGRFV Trigger: AACAAAACGCCCCACCCAGGAGACAGAAGCAGCTATGGCCAGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 90 bp | AAGGTATATCTGACCCTGGAGTGGGTGTCCTCTGAGCAGGGGGTCTaGTATGCTCTGGGTACAGTTTCTCTCCAAGTGGCTTGGCTCCAG | + |
Preference number: 1 (lower is better) Translates to: KVYLTLEWVSSEQGV*YALGTVSLQVAWLQ Trigger: CTGGAGCCAAGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCCCCTGCTCAGAGGACACCCACTCCAGGGTCAGATATACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 90 bp | AGCCCTGGCACTGGAGTTATGAATGATTGTGCACAACCAGGTAAGTaGTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTC | + |
Preference number: 1 (lower is better) Translates to: SPGTGVMNDCAQPGK*WDSIPGPLQEQPVL Trigger: GAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGGTTGTGCACAATCATTCATAACTCCAGTGCCAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CCA 90 bp | CTGGTATACTTCTTCAGGGATGGCTTCCCGCCAGGACTCAGACACTaGGAGCTGAGTGTAGGAGTTGAACAGAACTTCAATGACTTCAGG | + |
Preference number: 1 (lower is better) Translates to: LVYFFRDGFPPGLRH*ELSVGVEQNFNDFR Trigger: CCTGAAGTCATTGAAGTTCTGTTCAACTCCTACACTCAGCTCCCAGTGTCTGAGTCCTGGCGGGAAGCCATCCCTGAAGAAGTATACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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3UTR CCA 90 bp | AAGGTGGTCATGAAGAGTTCTTGCTTTCAAATTCAGGCTACTGGATaGCTCCCTGGTAGAGCCTTTACCAAAGGCATAAGAGGCCCTGAG | + |
Preference number: 1 (lower is better) Translates to: KVVMKSSCFQIQATG*LPGRAFTKGIRGPE Trigger: CTCAGGGCCTCTTATGCCTTTGGTAAAGGCTCTACCAGGGAGCCATCCAGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGACCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 90 bp | GGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTaGTGGACAGCTATAATAACAGTTACCAATTCCATGTCAAGGTGC | + |
Preference number: 1 (lower is better) Translates to: GFNPRSSARAASALH*WTAIITVTNSMSRC Trigger: GCACCTTGACATGGAATTGGTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 90 bp | TACCCGGCTTTTGCCAATATTTACCAGAGTGGGACTAGCAAGGGTTaGAAGATGGTTTCAAGCAGAAGACATCTAAGTGACCAAGGTCGG | + |
Preference number: 1 (lower is better) Translates to: YPAFANIYQSGTSKG*KMVSSRRHLSDQGR Trigger: CCGACCTTGGTCACTTAGATGTCTTCTGCTTGAAACCATCTTTCAACCCTTGCTAGTCCCACTCTGGTAAATATTGGCAAAAGCCGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 90 bp | TTAGAAAGAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATaGAGAGTTCTTGCTTTCAAATTCAGGCTACTGGATGGCTCCCTG | + |
Preference number: 1 (lower is better) Translates to: LERKGATLLISRRWS*RVLAFKFRLLDGSL Trigger: CAGGGAGCCATCCAGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTCTTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 90 bp | GTAAGTGCTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTaGTCTTCATTGCTGGACAGCTATAATAACAGTTACCAATTCCAT | + |
Preference number: 1 (lower is better) Translates to: VSAGIQSQVLCKSSQ*SSLLDSYNNSYQFH Trigger: ATGGAATTGGTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CCA 90 bp | TTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTaGACAGCTATAATAACAGTTACCAATTCCATGTCAAGGTGCACT | + |
Preference number: 1 (lower is better) Translates to: FNPRSSARAASALHC*TAIITVTNSMSRCT Trigger: AGTGCACCTTGACATGGAATTGGTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 90 bp | TTTACCTTATTTCACGAATGTTTTGCCTGCATGCATATATGTATATaGAGTGCCCATAGAGGTCCCTGGAAGCCCTGGCACTGGAGTTAT | + |
Preference number: 1 (lower is better) Translates to: FTLFHECFACMHICI*SAHRGPWKPWHWSY Trigger: ATAACTCCAGTGCCAGGGCTTCCAGGGACCTCTATGGGCACTGCATATACATATATGCATGCAGGCAAAACATTCGTGAAATAAGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 90 bp | ACTCCATACATTGTAGCAGCAATAGGAATGTCTGCCCATCCACTGTaGGGTTCACTTCAGACCATCTATCTCATCCTAGCTGTAATTAGA | + |
Preference number: 1 (lower is better) Translates to: TPYIVAAIGMSAHPL*GSLQTIYLILAVIR Trigger: TCTAATTACAGCTAGGATGAGATAGATGGTCTGAAGTGAACCTCACAGTGGATGGGCAGACATTCCTATTGCTGCTACAATGTATGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 90 bp | TGGACAGCTATAATAACAGTTACCAATTCCATGTCAAGGTGCACTTaGAGCTGTATGTCTGTGTTTTTCCTGGTTACTTGGGAGACAGAA | + |
Preference number: 1 (lower is better) Translates to: WTAIITVTNSMSRCT*SCMSVFFLVTWETE Trigger: TTCTGTCTCCCAAGTAACCAGGAAAAACACAGACATACAGCTTCAAGTGCACCTTGACATGGAATTGGTAACTGTTATTATAGCTGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 90 bp | AGCCATGGGAGGGGCTGTCCCTTAGGGCCAGCAAGGCTCCCTGTGTaGAAGCAGCAGAACCAAGATGTAAGGATTAAGGGAGCGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: SHGRGCPLGPARLPV*KQQNQDVRIKGAQA Trigger: GGCCTGCGCTCCCTTAATCCTTACATCTTGGTTCTGCTGCTTCAACACAGGGAGCCTTGCTGGCCCTAAGGGACAGCCCCTCCCATGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 90 bp | GCAGGGGGTCTGCTATGCTCTGGGTACAGTTTCTCTCCAAGTGGCTaGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTC | + |
Preference number: 2 (lower is better) Translates to: AGGLLCSGYSFSPSG*APGGMGASPVSPRV Trigger: GACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAAGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | GCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTGCTGCAGGCAGCGCGGGGTATGTCCTCAGAACCTTaGGGAAGGCATCAGGCCACA | + |
Preference number: 2 (lower is better) Translates to: AEEFSDSTAAKVLQAARGMSSEP*GRHQAT Trigger: TGTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACAT...ACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151330.2 |
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3UTR-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTCCTCCGGTGTCCTGTaGGTGCTGGGCTCTCCTGTG | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFSSGVL*VLGSPV Trigger: CACAGGAGAGCCCAGCACTCACAGGACACCGGAGGA...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTTCTCTCCAAGTGGCTTaGCTCCAGGAGGGATGGGAG | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPSLQVA*LQEGWE Trigger: CTCCCATCCCTCCTGGAGCCAAGCCACTTGGAGAGA...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGGGAGTGGGTGTCCTCTaGGCAGGGGGTCTGCTATGC | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAGVGVL*AGGLLC Trigger: GCATAGCAGACCCCCTGCTCAGAGGACACCCACTCC...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTATTGTCCTGACGCCTaGGGGAGGGGCTCCTCTCGG | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAYCPDA*GRGSSR Trigger: CCGAGAGGAGCCCCTCCCTCAGGCGTCAGGACAATA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | GTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGACTTGTTTGGCCTTAGGGTaGCTAGTTTGCACAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: VRSDGMGKEGQTGLGSMTCLALG*LVCTGQ Trigger: CTGCCCTGTGCAAACTAGTCACCCTAAGGCCAAACA...AGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | AAAGCAGGTAATTTTGCAGAGTCTCAGGTAATGGTAGCTGGGGCACAAGGTGAACAGCGGCAAAGGTGCTaGAGGCAGCGCGGGGTGTGT | + |
Preference number: 2 (lower is better) Translates to: KAGNFAESQVMVAGAQGEQRQRC*RQRGVC Trigger: ACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTG...TTCACCTTGTGCCCCAGCTACCATTACCTGAGACTCTGCAAAATTACCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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3UTR-3UTR GCA 90 bp | AAAGCAGGTAATTTTGCAGAGTCTCAGGTAATGGTAGCTGGGGCACAAGGTGAAGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTG | + |
Preference number: 2 (lower is better) Translates to: KAGNFAESQVMVAGAQGEVQRQR*CRQRGV Trigger: CACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTAC...TTCACCTTGTGCCCCAGCTACCATTACCTGAGACTCTGCAAAATTACCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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3UTR-3UTR CCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTCAGTTTCTCTCCAAGTaGCTTGGCTCCAGGAGGGAT | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPQFLSK*LGSRRD Trigger: ATCCCTCCTGGAGCCAAGCCACTTGGAGAGAAACTG...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTCAGGCCTTGATGTTCTaGCATCTCTTGCTGTGTGGT | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPQALMF*HLLLCG Trigger: ACCACACAGCAAGAGATGTCAGAACATCAAGGCCTG...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGGGCTCTCCTGTGTTTaGAAGCACAATGGGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFGLSCV*KHNGPL Trigger: AAGGGGCCCATTGTGCTTGCAAACACAGGAGAGCCC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTGTTTGGCCTTAGGGTaGCTAGTTTGCACAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFCLALG*LVCTGQ Trigger: CTGCCCTGTGCAAACTAGTCACCCTAAGGCCAAACA...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACTGCAAGAGCAGCCAGTaGTCTTCATTGCTGGACAGC | + |
Preference number: 2 (lower is better) Translates to: ESLTKEVALFGLRVTSLHCKSSQ*SSLLDS Trigger: GCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCA...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGCAATCCCAGGTCCTCTaGAAGAGCAGCCAGTGCTCT | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAQSQVL*KSSQCS Trigger: AGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTG...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | GTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGACTGCATGGTTATCAGAGTaGCATTTTCTCTCTAGGGAC | + |
Preference number: 2 (lower is better) Translates to: VRSDGMGKEGQTGLGSMTAWLSE*HFLSRD Trigger: GTCCCTAGAGAGAAAATGTCACTCTGATAACCATGC...AGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTGCATGGTTATCAGAGTaGCATTTTCTCTCTAGGGAC | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPAWLSE*HFLSRD Trigger: GTCCCTAGAGAGAAAATGTCACTCTGATAACCATGC...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTGCAAGAGCAGCCAGTaGTCTTCATTGCTGGACAGC | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWACKSSQ*SSLLDS Trigger: GCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | CTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTGGTTTTTCCTGGTTACTTaGGAGACAGAAGGGGGTAGA | + |
Preference number: 2 (lower is better) Translates to: LGFNPRSSARAASALHCWFFLVT*ETEGGR Trigger: TCTACCCCCTTCTGTCTCCCAAGTAACCAGGAAAAA...CCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTAGGTGTCTGGCCATaGAGAGGTTTAGGCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFLGVWP*RGLGRA Trigger: TGCTCTGCCTAAACCTCTCCATGGCCAGACACCTAA...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTCAGGTCGGATGGGATaGGCAAGGAAGGACAAACAG | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWASGRMG*ARKDKQ Trigger: CTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTATGTCAAGGTGCACTTaGAGCTGTATGTCTGTGTTT | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPMSRCT*SCMSVF Trigger: AAACACAGACATACAGCTTCAAGTGCACCTTGACAT...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCCTGGCACTGGAGTTATaGATGATTGTGCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFLALEL*MIVHNQ Trigger: CTGGTTGTGCACAATCATTCATAACTCCAGTGCCAG...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGGCACAACCAGGTAAGTaGTGGGATTCAATCCCAGGT | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAAQPGK*WDSIPG Trigger: ACCTGGGATTGAATCCCAGCACTTACCTGGTTGTGC...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR GCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTATGCATATATGTATATaGAGTGCCCATAGAGGTCCC | + |
Preference number: 2 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPMHICI*SAHRGP Trigger: GGGACCTCTATGGGCACTGCATATACATATATGCAT...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | GTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGACTGCAAGGGTTGAAAGATaGTTTCAAGCAGAAGACATC | + |
Preference number: 2 (lower is better) Translates to: VRSDGMGKEGQTGLGSMTARVER*FQAEDI Trigger: GATGTCTTCTGCTTGAAACCATCTTTCAACCCTTGC...AGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGAGGGCCTATAAAAACTaGGACCTCTTTCCCCTCGAG | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWARAYKN*DLFPLE Trigger: CTCGAGGGGAAAGAGGTCCCAGTTTTTATAGGCCCT...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTCAGAAGACATCTAAGTaGCCAAGGTCGGGCTTACCA | + |
Preference number: 2 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLQKTSK*PRSGLP Trigger: TGGTAAGCCCGACCTTGGTCACTTAGATGTCTTCTG...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR TCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTCAGGCCTTGATGTTCTaGCATCTCTTGCTGTGTGGT | + |
Preference number: 2 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLQALMF*HLLLCG Trigger: ACCACACAGCAAGAGATGTCAGAACATCAAGGCCTG...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGGCACTGAAAGATCCTaGCAGAATGTAAAAGGACAC | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFGTERS*QNVKGH Trigger: GTGTCCTTTTACATTCTGTCAGGATCTTTCAGTGCC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR GCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTGCAGAAAGGGGAAGATaGAGAGAAGAACCTGGGCCC | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVAERGR*REEPGP Trigger: GGGCCCAGGTTCTTCTCTGCATCTTCCCCTTTCTGC...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CAA 90 bp | GGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATaGCTGGACAGCTATAATAACAGTTACCAATTCCATGTCAAGGTG | + |
Preference number: 2 (lower is better) Translates to: GIQSQVLCKSSQCSS*LDSYNNSYQFHVKV Trigger: CACCTTGACATGGAATTGGTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACATGTCAAGGTGCACTTaGAGCTGTATGTCTGTGTTT | + |
Preference number: 2 (lower is better) Translates to: ESLTKEVALFGLRVTSLHMSRCT*SCMSVF Trigger: AAACACAGACATACAGCTTCAAGTGCACCTTGACAT...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CCA 90 bp | TACCATCCTCCGGTGTCCTGTGAGTGCTGGGCTCTCCTGTGTTTGCAAGCACAAAGTGCTCTTCATTGCTaGACAGCTATAATAACAGTT | + |
Preference number: 2 (lower is better) Translates to: YHPPVSCECWALLCLQAQSALHC*TAIITV Trigger: AACTGTTATTATAGCTGTCCAGCAATGAAGAGCACT...TTGTGCTTGCAAACACAGGAGAGCCCAGCACTCACAGGACACCGGAGGATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTCAGTTTCTCTCCAAGTaGCTTGGCTCCAGGAGGGAT | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVQFLSK*LGSRRD Trigger: ATCCCTCCTGGAGCCAAGCCACTTGGAGAGAAACTG...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTAACCTATCTCCTTTGTaGTGGCCAGCCTCAACAGGT | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVNLSPL*WPASTG Trigger: ACCTGTTGAGGCTGGCCATCACAAAGGAGATAGGTT...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGCTGGAAGTATGCCTTaGAAACCATTCATTATCTCT | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFAGSMP*KPFIIS Trigger: AGAGATAATGAATGGTTTCCAAGGCATACTTCCAGC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTGGGTCTGCTATGCTCTaGGTACAGTTTCTCTCCAAG | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVGSAML*VQFLSK Trigger: CTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCC...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTGTTCCTCACCAACATaGGACAGAAGCATATATATA | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFCSSPT*DRSIYI Trigger: TATATATATGCTTCTGTCTCATGTTGGTGAGGAACA...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACCATTATCTCTTAGTCTaGCTTTGGTTTAGGGTACTT | + |
Preference number: 2 (lower is better) Translates to: ESLTKEVALFGLRVTSLHHYLLV*LWFRVL Trigger: AAGTACCCTAAACCAAAGTCAGACTAAGAGATAATG...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR GCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGTCATGAAGAGTTCTTaGTTTCAAATTCAGGCTACT | + |
Preference number: 2 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFVMKSS*FQIQAT Trigger: AGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGAC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGGCTGGAAGTATGCCTTaGAAACCATTCATTATCTCT | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAAGSMP*KPFIIS Trigger: AGAGATAATGAATGGTTTCCAAGGCATACTTCCAGC...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGAAACACCATTGTCACTaGATGGATAGTTTAGTCTTG | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAKHHCH*MDSLVL Trigger: CAAGACTAAACTATCCATTCAGTGACAATGGTGTTT...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR TCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTTGTTCCTCACCAACATaGGACAGAAGCATATATATA | + |
Preference number: 2 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLCSSPT*DRSIYI Trigger: TATATATATGCTTCTGTCTCATGTTGGTGAGGAACA...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR GCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGAATGTTTTGCCTGCATaGATATATGTATATGCAGTG | + |
Preference number: 2 (lower is better) Translates to: QPQQVDSTWSLFLFSLWANVLPA*IYVYAV Trigger: CACTGCATATACATATATGCATGCAGGCAAAACATT...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTGCAAGGGTTGAAAGATaGTTTCAAGCAGAAGACATC | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVARVER*FQAEDI Trigger: GATGTCTTCTGCTTGAAACCATCTTTCAACCCTTGC...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CAA 90 bp | CTGGACAGCTATAATAACAGTTACCAATTCCATGTCAAGGTGCACTaGAAGCTGTATGTCTGTGTTTTTCCTGGTTACTTGGGAGACAGA | + |
Preference number: 2 (lower is better) Translates to: LDSYNNSYQFHVKVH*KLYVCVFPGYLGDR Trigger: TCTGTCTCCCAAGTAACCAGGAAAAACACAGACATACAGCTTCAAGTGCACCTTGACATGGAATTGGTAACTGTTATTATAGCTGTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR GCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTGTCATGAAGAGTTCTTaGTTTCAAATTCAGGCTACT | + |
Preference number: 2 (lower is better) Translates to: ITKGRMRSDHPKELKDVVVMKSS*FQIQAT Trigger: AGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGAC...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CCA 72 bp | GGCCACCCAGCAGCCCTTAGGCTTGGTCAGGTCGGATaGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTC | + |
Preference number: 3 (lower is better) Translates to: GHPAALRLGQVG*DGQGRTNRPWV Trigger: GACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGACCAAGCCTAAGGGCTGCTGGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | CCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTGCTaGAGGCAGCGCGGGGTGTGTGCCAAGGCGAAGAGA | + |
Preference number: 3 (lower is better) Translates to: PKSFRIVQRQRC*RQRGVCAKAKR Trigger: TCTCTTCGCCTTGGCACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
||
3UTR GCA 72 bp | TTGCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTGTGTGCCAAGGCGAAG | + |
Preference number: 3 (lower is better) Translates to: LPKSFRIVQRQR*CRQRGVCAKAK Trigger: CTTCGCCTTGGCACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
||
3UTR TCA 72 bp | GGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATaGCTGGCCATAGCTGCTTCTGTCTCCTGGGTGGGG | + |
Preference number: 3 (lower is better) Translates to: GWARKDKQALGL*LAIAASVSWVG Trigger: CCCCACCCAGGAGACAGAAGCAGCTATGGCCAGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 72 bp | CGTGAGTTCTTGGGTGTCCGCTATTGTCCTGACGCCTaGGGGAGGGGCTCCTCTCGGAGTCTTTCAGCACTT | + |
Preference number: 3 (lower is better) Translates to: REFLGVRYCPDA*GRGSSRSLSAL Trigger: AAGTGCTGAAAGACTCCGAGAGGAGCCCCTCCCTCAGGCGTCAGGACAATAGCGGACACCCAAGAACTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 72 bp | CTGACCCTGGAGTGGGTGTCCTCTGAGCAGGGGGTCTaGTATGCTCTGGGTACAGTTTCTCTCCAAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: LTLEWVSSEQGV*YALGTVSLQVA Trigger: AGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCCCCTGCTCAGAGGACACCCACTCCAGGGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CCA 72 bp | AGTGGGTGTCCTCTGAGCAGGGGGTCTGCTATGCTCTaGGTACAGTTTCTCTCCAAGTGGCTTGGCTCCAGG | + |
Preference number: 3 (lower is better) Translates to: SGCPLSRGSAML*VQFLSKWLGSR Trigger: CCTGGAGCCAAGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAGACCCCCTGCTCAGAGGACACCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CAA 90 bp | CTCTCCTTGCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTGCTGCAGGCAGCATGTCCTCAGAACCTaGGGGAAGGCATCAGGCCAC | + |
Preference number: 3 (lower is better) Translates to: LSLPKSFRIVQRQRCCRQHVLRT*GKASGH Trigger: GTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACATG...CTGCCTGCAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGCAAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151330.2 |
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3UTR GCA 72 bp | GCACAATGCTCTGGCCACTCCTTGAACCTGTGTGTCTaGCAATGTTCTGACCAGGTGTGTGCCCATTGCTGC | + |
Preference number: 3 (lower is better) Translates to: AQCSGHSLNLCV*QCSDQVCAHCC Trigger: GCAGCAATGGGCACACACCTGGTCAGAACATTGGCAGACACACAGGTTCAAGGAGTGGCCAGAGCATTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CAA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACTGGGCTCTCCTGTGTTaGCAAGCACAATGGGCCCCT | + |
Preference number: 3 (lower is better) Translates to: ESLTKEVALFGLRVTSLHWALLC*QAQWAP Trigger: AGGGGCCCATTGTGCTTGCAAACACAGGAGAGCCCA...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CAA 90 bp | TTGGTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGGCAAGGCTCCCTGTGTaGAAGCAGCAGAACCAAGAT | + |
Preference number: 3 (lower is better) Translates to: LVRSDGMGKEGQTGLGSMARLPV*KQQNQD Trigger: ATCTTGGTTCTGCTGCTTCAACACAGGGAGCCTTGC...CATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | CTTGAAGGTATATCTGACCCTGGAGTGGGTGTCCTCTaGGCAGGGGGTCTGCTATGCTCTGGGTACAGTTTC | + |
Preference number: 3 (lower is better) Translates to: LEGISDPGVGVL*AGGLLCSGYSF Trigger: GAAACTGTACCCAGAGCATAGCAGACCCCCTGCTCAGAGGACACCCACTCCAGGGTCAGATATACCTTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR GCA 72 bp | AACCAGGTAAGTGCTGGGATTCAATCCCAGGTCCTCTaGAAGAGCAGCCAGTGCTCTTCATTGCTGGACAGC | + |
Preference number: 3 (lower is better) Translates to: NQVSAGIQSQVL*KSSQCSSLLDS Trigger: GCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CAA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTGGGCTCTCCTGTGTTaGCAAGCACAATGGGCCCCT | + |
Preference number: 3 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAWALLC*QAQWAP Trigger: AGGGGCCCATTGTGCTTGCAAACACAGGAGAGCCCA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CAA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCCTGAGACATCCCTCATaGCGGGTGTTTGCTGCAGTC | + |
Preference number: 3 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFLRHPS*RVFAAV Trigger: GACTGCAGCAAACACCCGCAATGAGGGATGTCTCAG...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR-3UTR CAA 90 bp | GTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGACTAGCCAGTGCTCTTCATaGCTGGACAGCTATAATAAC | + |
Preference number: 3 (lower is better) Translates to: VRSDGMGKEGQTGLGSMTSQCSS*LDSYNN Trigger: GTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCT...AGTCATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 72 bp | GGGTTGAAAGATGGTTTCAAGCAGAAGACATCTAAGTaGCCAAGGTCGGGCTTACCATCCTCCGGTGTCCTG | + |
Preference number: 3 (lower is better) Translates to: GLKDGFKQKTSK*PRSGLPSSGVL Trigger: CAGGACACCGGAGGATGGTAAGCCCGACCTTGGTCACTTAGATGTCTTCTGCTTGAAACCATCTTTCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | GCCATGGAGAGGTTTAGGCAGAGCAGTATTCCTAAGTaGGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCT | + |
Preference number: 3 (lower is better) Translates to: AMERFRQSSIPK*ESNKGGGPVWP Trigger: AGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTCACTTAGGAATACTGCTCTGCCTAAACCTCTCCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | GGAGTTGAACAGAACTTCAATGACTTCAGGCACCTGTaGACATGTCCTCAGAACCTTGGGGAAGGCATCAGG | + |
Preference number: 3 (lower is better) Translates to: GVEQNFNDFRHL*TCPQNLGEGIR Trigger: CCTGATGCCTTCCCCAAGGTTCTGAGGACATGTGCACAGGTGCCTGAAGTCATTGAAGTTCTGTTCAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151330.2 |
||
3UTR TCA 72 bp | CTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTTGCTaGGACATCCCTCATTGCGGGTGTTTGCTGCAGTCT | + |
Preference number: 3 (lower is better) Translates to: LGPCSYFHCGRC*DIPHCGCLLQS Trigger: AGACTGCAGCAAACACCCGCAATGAGGGATGTCTCAGCAACGCCCACAATGAAAATAAGAACAGGGACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CAA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTTGCTCTGGCCACTCCTaGAACCTGTGTGTCTGCCAA | + |
Preference number: 3 (lower is better) Translates to: ITKGRMRSDHPKELKDVVCSGHS*NLCVCQ Trigger: TTGGCAGACACACAGGTTCAAGGAGTGGCCAGAGCA...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | GGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTaGTCTTCATTGCTGGACAGCTATAATAACAGTTAC | + |
Preference number: 3 (lower is better) Translates to: GIQSQVLCKSSQ*SSLLDSYNNSY Trigger: GTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | ACTGGAGTTATGAATGATTGTGCACAACCAGGTAAGTaGTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: TGVMNDCAQPGK*WDSIPGPLQEQ Trigger: CTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGGTTGTGCACAATCATTCATAACTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CAA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTGCAAGGCTCCCTGTGTaGAAGCAGCAGAACCAAGAT | + |
Preference number: 3 (lower is better) Translates to: ITKGRMRSDHPKELKDVVARLPV*KQQNQD Trigger: ATCTTGGTTCTGCTGCTTCAACACAGGGAGCCTTGC...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR-3UTR CAA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGGTCATGAAGAGTTCTaGCTTTCAAATTCAGGCTAC | + |
Preference number: 3 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFGHEEF*LSNSGY Trigger: GTAGCCTGAATTTGAAAGCAAGAACTCTTCATGACC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CCA 72 bp | CAAGGTGCACTTGAAGCTGTATGTCTGTGTTTTTCCTaGTTACTTGGGAGACAGAAGGGGGTAGACATGTAC | + |
Preference number: 3 (lower is better) Translates to: QGALEAVCLCFS*LLGRQKGVDMY Trigger: GTACATGTCTACCCCCTTCTGTCTCCCAAGTAACCAGGAAAAACACAGACATACAGCTTCAAGTGCACCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR TCA 72 bp | AAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATaGAGAGTTCTTGCTTTCAAATTCAGGCTACTGGAT | + |
Preference number: 3 (lower is better) Translates to: KGATLLISRRWS*RVLAFKFRLLD Trigger: ATCCAGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | ATTGTAGCAGCAATAGGAATGTCTGCCCATCCACTGTaGGGTTCACTTCAGACCATCTATCTCATCCTAGCT | + |
Preference number: 3 (lower is better) Translates to: IVAAIGMSAHPL*GSLQTIYLILA Trigger: AGCTAGGATGAGATAGATGGTCTGAAGTGAACCTCACAGTGGATGGGCAGACATTCCTATTGCTGCTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CCA 72 bp | CAACCTATCTCCTTTGTGATGGCCAGCCTCAACAGGTaGACTCTACTTGGTCCCTGTTCTTATTTTCATTGT | + |
Preference number: 3 (lower is better) Translates to: QPISFVMASLNR*TLLGPCSYFHC Trigger: ACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR CCA 72 bp | ATGAAGAGTTCTTGCTTTCAAATTCAGGCTACTGGATaGCTCCCTGGTAGAGCCTTTACCAAAGGCATAAGA | + |
Preference number: 3 (lower is better) Translates to: MKSSCFQIQATG*LPGRAFTKGIR Trigger: TCTTATGCCTTTGGTAAAGGCTCTACCAGGGAGCCATCCAGTAGCCTGAATTTGAAAGCAAGAACTCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | TTTGCCAATATTTACCAGAGTGGGACTAGCAAGGGTTaGAAGATGGTTTCAAGCAGAAGACATCTAAGTGAC | + |
Preference number: 3 (lower is better) Translates to: FANIYQSGTSKG*KMVSSRRHLSD Trigger: GTCACTTAGATGTCTTCTGCTTGAAACCATCTTTCAACCCTTGCTAGTCCCACTCTGGTAAATATTGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | ATAATAACAGTTACCAATTCCATGTCAAGGTGCACTTaGAGCTGTATGTCTGTGTTTTTCCTGGTTACTTGG | + |
Preference number: 3 (lower is better) Translates to: IITVTNSMSRCT*SCMSVFFLVTW Trigger: CCAAGTAACCAGGAAAAACACAGACATACAGCTTCAAGTGCACCTTGACATGGAATTGGTAACTGTTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR TCA 72 bp | AGCCTCGTGCCACTAACTGCGTGTTCCTCACCAACATaGGACAGAAGCATATATATATATATATACATACAT | + |
Preference number: 3 (lower is better) Translates to: SLVPLTACSSPT*DRSIYIYIYIH Trigger: ATGTATGTATATATATATATATATGCTTCTGTCTCATGTTGGTGAGGAACACGCAGTTAGTGGCACGAGGCT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | ATTTATTTACCTTATTTCACGAATGTTTTGCCTGCATaGATATATGTATATGCAGTGCCCATAGAGGTCCCT | + |
Preference number: 3 (lower is better) Translates to: IYLPYFTNVLPA*IYVYAVPIEVP Trigger: AGGGACCTCTATGGGCACTGCATATACATATATGCATGCAGGCAAAACATTCGTGAAATAAGGTAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
3UTR GCA 72 bp | CAACATTTATTTACCTTATTTCACGAATGTTTTGCCTaGATGCATATATGTATATGCAGTGCCCATAGAGGT | + |
Preference number: 3 (lower is better) Translates to: QHLFTLFHECFA*MHICICSAHRG Trigger: ACCTCTATGGGCACTGCATATACATATATGCATGCAGGCAAAACATTCGTGAAATAAGGTAAATAAATGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR CCA 90 bp | GGCAGCGCGGGGTGTGTGCCAAGGCGAAGAGAGACCTGTAGAAAGGCTTGTGCACGCACGCAGGACTCGTaGCCGTGGGCCGCAGCGATG | + |
Preference number: 4 (lower is better) Translates to: GSAGCVPRRRETCRKACARTQDS*PWAAAM Trigger: CATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCG...TGCACAAGCCTTTCTACAGGTCTCTCTTCGCCTTGGCACACACCCCGCGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
||
CDS-3UTR GCA 90 bp | CCAGGTAAGTGCTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCGGTGTGCGGCATAGGTaGAGGGGTGCCAGGCCCTCG | + |
Preference number: 4 (lower is better) Translates to: PGKCWDSIPGPLQEQPVLGVRHR*RGARPS Trigger: CGAGGGCCTGGCACCCCTGCACCTATGCCGCACACC...GAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR GCA 90 bp | GGCTTCCCGCCAGGACTCAGACACTGGGAGCTGAGTGTAGGAGTTGAACAGAACGGTGTGCGGCATAGGTaGAGGGGTGCCAGGCCCTCG | + |
Preference number: 4 (lower is better) Translates to: GFPPGLRHWELSVGVEQNGVRHR*RGARPS Trigger: CGAGGGCCTGGCACCCCTGCACCTATGCCGCACACC...GTTCTGTTCAACTCCTACACTCAGCTCCCAGTGTCTGAGTCCTGGCGGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
||
CDS-3UTR CCA 90 bp | TTGGTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGCGCACGCAGGACTCGTaGCCGTGGGCCGCAGCGATG | + |
Preference number: 4 (lower is better) Translates to: LVRSDGMGKEGQTGLGSMRTQDS*PWAAAM Trigger: CATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCG...CATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR GCA 90 bp | TACTTCTTCAGGGATGGCTTCCCGCCAGGACTCAGACACTGGGAGCTGAGTGTACAAGCGAGGCGGGTGTaGGGCATAGGTGCAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: YFFRDGFPPGLRHWELSVQARRV*GIGAGV Trigger: CACCCCTGCACCTATGCCGCACACCCGCCTCGCTTG...TACACTCAGCTCCCAGTGTCTGAGTCCTGGCGGGAAGCCATCCCTGAAGAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
||
CDS-3UTR GCA 90 bp | CCAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAATGGCCGCAGGCCTTGTaGAGCGGGCTGCGCTCGTCC | + |
Preference number: 4 (lower is better) Translates to: PGFCPSHRTSAERGRCREWPQAL*SGLRSS Trigger: GGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCA...TTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | TACCATCCTCCGGTGTCCTGTGAGTGCTGGGCTCTCCTGTGTTTGCAAGCACAACAGCGGCAAAGGTGCTaGAGGCAGCGCGGGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: YHPPVSCECWALLCLQAQQRQRC*RQRGVC Trigger: ACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTG...TTGTGCTTGCAAACACAGGAGAGCCCAGCACTCACAGGACACCGGAGGATGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR CCA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACCGCACGCAGGACTCGTaGCCGTGGGCCGCAGCGATG | + |
Preference number: 4 (lower is better) Translates to: ESLTKEVALFGLRVTSLHRTQDS*PWAAAM Trigger: CATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCG...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 72 bp | ATGACTTCAGGCACCTGTGCACATGTCCTCAGAACCTaGGGGAAGGCATCAGGCCACACGGAGCGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: MTSGTCAHVLRT*GKASGHTERDP Trigger: CGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACATGTGCACAGGTGCCTGAAGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151330.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTCAATAACCCACAAGCGAGGCGGGTGTaGGGCATAGGTGCAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: LAPGGMGASPVSPRVNNPQARRV*GIGAGV Trigger: CACCCCTGCACCTATGCCGCACACCCGCCTCGCTTG...TGGGTTATTGACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR GCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGCCTTGTGCAGCGGGCTaGGCTCGTCCTCGTCACGCG | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKPCAAG*ARPRHA Trigger: CGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGG...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTGGCCGCAGGCCTTGTaGAGCGGGCTGCGCTCGTCC | + |
Preference number: 4 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAWPQAL*SGLRSS Trigger: GGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR GCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTGCAGCGCGGGGTGTGTaGCAAGGCGAAGAGAGACCT | + |
Preference number: 4 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPAARGV*QGEERP Trigger: AGGTCTCTCTTCGCCTTGGCACACACCCCGCGCTGC...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTGGGCAGCGCGGGGTGTGTaGCAAGGCGAAGAGAGACCT | + |
Preference number: 4 (lower is better) Translates to: LGFNPRSSARAASALHCWAARGV*QGEERP Trigger: AGGTCTCTCTTCGCCTTGGCACACACCCCGCGCTGC...CCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTCAATAACCCACAGCGGCAAAGGTGCTaGAGGCAGCGCGGGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: LAPGGMGASPVSPRVNNPQRQRC*RQRGVC Trigger: ACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTG...TGGGTTATTGACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | GTAGAAAGGCTTGTGCATCTGGTATACTTCTTCAGGGATGGCTTCCCGCCAGGACAGGACTCGTGGCCGTaGGCCGCAGCGATGCACAGC | + |
Preference number: 4 (lower is better) Translates to: VERLVHLVYFFRDGFPPGQDSWP*AAAMHS Trigger: GCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTG...TCCTGGCGGGAAGCCATCCCTGAAGAAGTATACCAGATGCACAAGCCTTTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS-3UTR GCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGCAGCGGCAAAGGTGCTaGAGGCAGCGCGGGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKQRQRC*RQRGVC Trigger: ACACACCCCGCGCTGCCTGCAGCACCTTTGCCGCTG...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTG | + |
Preference number: 4 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFVQRQR*CRQRGV Trigger: CACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTAC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTG | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKVQRQR*CRQRGV Trigger: CACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTAC...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CCAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGTACAGCGGCAAAGGTaGTGCAGGCAGCGCGGGGTG | + |
Preference number: 4 (lower is better) Translates to: PGFCPSHRTSAERGRCREVQRQR*CRQRGV Trigger: CACCCCGCGCTGCCTGCAGCACCTTTGCCGCTGTAC...TTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTGGGTGGTCCAGGTCTCCTaGCAGCAGTGCAGCGTGGAA | + |
Preference number: 4 (lower is better) Translates to: LGFNPRSSARAASALHCWVVQVS*QQCSVE Trigger: TTCCACGCTGCACTGCTGGCAGGAGACCTGGACCAC...CCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPVVSSR*YSRVQR Trigger: CCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCAC...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | TCTGGTATACTTCTTCAGGGATGGCTTCCCGCCAGGACTCAGACACTGGGAGCTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: SGILLQGWLPARTQTLGAVVSSR*YSRVQR Trigger: CCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCAC...AGCTCCCAGTGTCTGAGTCCTGGCGGGAAGCCATCCCTGAAGAAGTATACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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3UTR CAA 72 bp | CACTTATACCACAGGGCCACCCAGCAGCCCTTAGGCTaGGTCAGGTCGGATGGGATGGGCAAGGAAGGACAA | + |
Preference number: 4 (lower is better) Translates to: HLYHRATQQPLG*VRSDGMGKEGQ Trigger: TTGTCCTTCCTTGCCCATCCCATCCGACCTGACCAAGCCTAAGGGCTGCTGGGTGGCCCTGTGGTATAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR TCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCA | + |
Preference number: 4 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFCTAVW*APAGTP Trigger: TGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCA...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTCCTTGTGCAGCGGGCTaGGCTCGTCCTCGTCACGCG | + |
Preference number: 4 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLPCAAG*ARPRHA Trigger: CGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGG...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGGCAGCGCGGGGTGTGTaGCAAGGCGAAGAGAGACCT | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKAARGV*QGEERP Trigger: AGGTCTCTCTTCGCCTTGGCACACACCCCGCGCTGC...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | TACCATCCTCCGGTGTCCTGTGAGTGCTGGGCTCTCCTGTGTTTGCAAGCACAAGCATCCCAGAAGCACTaGTCCATGAGGAGCCGGATG | + |
Preference number: 4 (lower is better) Translates to: YHPPVSCECWALLCLQAQASQKH*SMRSRM Trigger: CATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGC...TTGTGCTTGCAAACACAGGAGAGCCCAGCACTCACAGGACACCGGAGGATGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CCTGCATGGGATATGAGTCGTCCCCAGAGCTCTGGCTTTCCCCGAATAAAGCCTGCATCCCAGAAGCACTaGTCCATGAGGAGCCGGATG | + |
Preference number: 4 (lower is better) Translates to: PAWDMSRPQSSGFPRIKPASQKH*SMRSRM Trigger: CATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGC...AGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACGACTCATATCCCATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | GTGAACGCTCTCCTTGCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTGCTGGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: VNALLAEEFSDSTAAKVLVVSSR*YSRVQR Trigger: CCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCAC...CAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGCAAGGAGAGCGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151330.2 ENSMUST00000154228.8 |
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CDS-3UTR CCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTCAGGACTCGTGGCCGTaGGCCGCAGCGATGCACAGC | + |
Preference number: 4 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLQDSWP*AAAMHS Trigger: GCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTG...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR TCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGTGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCA | + |
Preference number: 4 (lower is better) Translates to: QPQQVDSTWSLFLFSLWACTAVW*APAGTP Trigger: TGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCA...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKVVSSR*YSRVQR Trigger: CCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCAC...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFVVSSR*YSRVQR Trigger: CCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCAC...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CCAGGTAAGTGCTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCATGTCCTCAGAACCTTaGGGAAGGCATCAGGCCACA | + |
Preference number: 4 (lower is better) Translates to: PGKCWDSIPGPLQEQPVLMSSEP*GRHQAT Trigger: TGTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACAT...GAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 72 bp | CTGCTATGCTCTGGGTACAGTTTCTCTCCAAGTGGCTaGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGT | + |
Preference number: 4 (lower is better) Translates to: LLCSGYSFSPSG*APGGMGASPVS Trigger: ACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAAGCCACTTGGAGAGAAACTGTACCCAGAGCATAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
||
CDS-3UTR TCA 90 bp | GAGCTGAGTGTAGGAGTTGAACAGAACTTCAATGACTTCAGGCACCTGTGCACATGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCA | + |
Preference number: 4 (lower is better) Translates to: ELSVGVEQNFNDFRHLCTCTAVW*APAGTP Trigger: TGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCA...TGTGCACAGGTGCCTGAAGTCATTGAAGTTCTGTTCAACTCCTACACTCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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3UTR CAA 72 bp | AGGGGCTGTCCCTTAGGGCCAGCAAGGCTCCCTGTGTaGAAGCAGCAGAACCAAGATGTAAGGATTAAGGGA | + |
Preference number: 4 (lower is better) Translates to: RGCPLGPARLPV*KQQNQDVRIKG Trigger: TCCCTTAATCCTTACATCTTGGTTCTGCTGCTTCAACACAGGGAGCCTTGCTGGCCCTAAGGGACAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTCAATAACCCAGCCAGGGATGTCACCTaGCATTCCATCTCTCCGTTA | + |
Preference number: 4 (lower is better) Translates to: LAPGGMGASPVSPRVNNPARDVT*HSISPL Trigger: TAACGGAGAGATGGAATGGCAGGTGACATCCCTGGC...TGGGTTATTGACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTCAAGCGAGGCGGGTGTaGGGCATAGGTGCAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: ITKGRMRSDHPKELKDVVQARRV*GIGAGV Trigger: CACCCCTGCACCTATGCCGCACACCCGCCTCGCTTG...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | TTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTCAATAACCCATCTCAAACACCGCGTTaGCATCCCAGAAGCACTGGT | + |
Preference number: 4 (lower is better) Translates to: LAPGGMGASPVSPRVNNPSQTPR*HPRSTG Trigger: ACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGA...TGGGTTATTGACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTCTGAGAGCCCAAAGGTaGCCAGGGATGTCACCTGCC | + |
Preference number: 4 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLLRAQR*PGMSPA Trigger: GGCAGGTGACATCCCTGGCCACCTTTGGGCTCTCAG...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | TATCTCCTTTGTGATGGCCAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCCAGCTTTCTCCCAGCTaGCTCTGGTCGTCTCTCCAT | + |
Preference number: 4 (lower is better) Translates to: YLLCDGQPQQVDSTWSLFQLSPS*LWSSLH Trigger: ATGGAGAGACGACCAGAGCCAGCTGGGAGAAAGCTG...GAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTGGCCATCACAAAGGAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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3UTR CAA 72 bp | GAGCTCTGGCTTTCCCCGAATAAAGCCTCATGTGGTTaGCAACAAGCTCGGTCTGTCGTGAGTTCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: ELWLSPNKASCG*QQARSVVSSWV Trigger: CACCCAAGAACTCACGACAGACCGAGCTTGTTGCAAACCACATGAGGCTTTATTCGGGGAAAGCCAGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | CCAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGCCAGGGATGTCACCTaGCATTCCATCTCTCCGTTA | + |
Preference number: 4 (lower is better) Translates to: PGFCPSHRTSAERGRCREARDVT*HSISPL Trigger: TAACGGAGAGATGGAATGGCAGGTGACATCCCTGGC...TTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGTCTCAAACACCGCGTTaGCATCCCAGAAGCACTGGT | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKSQTPR*HPRSTG Trigger: ACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGA...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGATGTCCTCAGAACCTTaGGGAAGGCATCAGGCCACA | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKMSSEP*GRHQAT Trigger: TGTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACAT...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR TCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTCGGGAGTCCCAGCTCTaGTCTGTGGCTCTTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: ITKGRMRSDHPKELKDVVRESQL*SVALGS Trigger: TGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCG...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACATCTTCTGCAAGATCTaGAGCTTTCTCCCAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: ESLTKEVALFGLRVTSLHIFCKI*SFLPAG Trigger: GCCAGCTGGGAGAAAGCTGCAGATCTTGCAGAAGAT...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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3UTR CAA 72 bp | AAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTaGCACAGGGCAGGCATGGTTATCAGAGTGACATTT | + |
Preference number: 4 (lower is better) Translates to: KEVALFGLRVTS*HRAGMVIRVTF Trigger: AAATGTCACTCTGATAACCATGCCTGCCCTGTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | TATAATAACAGTTACCAATTCCATGTCAAGGTGCACTTGAAGCTGTATGTCTGTGGTGTGCGGCATAGGTaGAGGGGTGCCAGGCCCTCG | + |
Preference number: 4 (lower is better) Translates to: YNNSYQFHVKVHLKLYVCGVRHR*RGARPS Trigger: CGAGGGCCTGGCACCCCTGCACCTATGCCGCACACC...ACAGACATACAGCTTCAAGTGCACCTTGACATGGAATTGGTAACTGTTATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTGGACACAAAACACCCTCTaGCTCCAAAAGCAGGTAATT | + |
Preference number: 4 (lower is better) Translates to: LGFNPRSSARAASALHCWTQNTL*LQKQVI Trigger: AATTACCTGCTTTTGGAGCCAGAGGGTGTTTTGTGT...CCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTATGTCCTCAGAACCTTaGGGAAGGCATCAGGCCACA | + |
Preference number: 4 (lower is better) Translates to: ITKGRMRSDHPKELKDVVMSSEP*GRHQAT Trigger: TGTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACAT...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGACACAAAACACCCTCTaGCTCCAAAAGCAGGTAATT | + |
Preference number: 4 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKTQNTL*LQKQVI Trigger: AATTACCTGCTTTTGGAGCCAGAGGGTGTTTTGTGT...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | ATAACAAAGGGCAGGATGAGGTCAGATCACCCAAAGGAGCTGAAAGATGTTGTTCCCAGCTCTGATCTGTaGCTCTTGGCTCATCTTCTG | + |
Preference number: 4 (lower is better) Translates to: ITKGRMRSDHPKELKDVVPSSDL*LLAHLL Trigger: CAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGG...AACAACATCTTTCAGCTCCTTTGGGTGATCTGACCTCATCCTGCCCTTTGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR GCA 90 bp | GAAAGGGGGCCACTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTTGCTTTCTTGGCTCATCTTCTaGAAGATCTGCAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: ERGPLCLSLEGGHEEFLLSWLIF*KICSFL Trigger: GAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGA...AAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAGTGGCCCCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR CCA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGACACAAAACACCCTCTaGCTCCAAAAGCAGGTAATT | + |
Preference number: 4 (lower is better) Translates to: QPQQVDSTWSLFLFSLWATQNTL*LQKQVI Trigger: AATTACCTGCTTTTGGAGCCAGAGGGTGTTTTGTGT...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 72 bp | TCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATaGCTGGACAGCTATAATAACAGTTACCAATTCCAT | + |
Preference number: 4 (lower is better) Translates to: SQVLCKSSQCSS*LDSYNNSYQFH Trigger: ATGGAATTGGTAACTGTTATTATAGCTGTCCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 72 bp | CTCTGCTTATCTCTAGAAGGTGGTCATGAAGAGTTCTaGCTTTCAAATTCAGGCTACTGGATGGCTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: LCLSLEGGHEEF*LSNSGYWMAPW Trigger: CCAGGGAGCCATCCAGTAGCCTGAATTTGAAAGCAAGAACTCTTCATGACCACCTTCTAGAGATAAGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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3UTR CAA 72 bp | TATAATAACAGTTACCAATTCCATGTCAAGGTGCACTaGAAGCTGTATGTCTGTGTTTTTCCTGGTTACTTG | + |
Preference number: 4 (lower is better) Translates to: YNNSYQFHVKVH*KLYVCVFPGYL Trigger: CAAGTAACCAGGAAAAACACAGACATACAGCTTCAAGTGCACCTTGACATGGAATTGGTAACTGTTATTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | TGCACAGGCCGGGGCGCGCGTGGCCGCAGGCCTTGTGCAGCGGGCTaGGCTCGTCCTCGTCACGCGCGTCTGCCGCCGCGCCGCCGCGCA | + |
Preference number: 5 (lower is better) Translates to: CTGRGARGRRPCAAG*ARPRHARLPPRRRA Trigger: TGCGCGGCGGCGCGGCGGCAGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCA 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | CATAGTCGAGCGCGCCCGCGTCGGCGCCGTGCCGCAGCAGGAGCGTaGACAGGCCGGGGCGCGCGTGGCCGCAGGCCTTGTGCAGCGGGC | + |
Preference number: 5 (lower is better) Translates to: HSRARPRRRRAAAGA*TGRGARGRRPCAAG Trigger: GCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCACGCTCCTGCTGCGGCACGGCGCCGACGCGGGCGCGCTCGACTATG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | AGCAGGAGCGTGCACAGGCCGGGGCGCGCGTGGCCGCAGGCCTTGTaGAGCGGGCTGCGCTCGTCCTCGTCACGCGCGTCTGCCGCCGCG | + |
Preference number: 5 (lower is better) Translates to: SRSVHRPGRAWPQAL*SGLRSSSSRASAAA Trigger: CGCGGCGGCAGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCACGCTCCTGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TCGGCGCCGTGCCGCAGCAGGAGCGTGCACAGGCCGGGGCGCGCGTaGCCGCAGGCCTTGTGCAGCGGGCTGCGCTCGTCCTCGTCACGC | + |
Preference number: 5 (lower is better) Translates to: SAPCRSRSVHRPGRA*PQALCSGLRSSSSR Trigger: GCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCACGCTCCTGCTGCGGCACGGCGCCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | CAGGCAGCGCGCGTGCTCGTCGGGGCTCCGCGCCGCCGCTCCGCATaGTGCGCTAAGGGCCGTTTCGCCCCGGCCGTTCCTCGCGTCCAC | + |
Preference number: 5 (lower is better) Translates to: QAARVLVGAPRRRSA*CAKGRFAPAVPRVH Trigger: GTGGACGCGAGGAACGGCCGGGGCGAAACGGCCCTTAGCGCAGCATGCGGAGCGGCGGCGCGGAGCCCCGACGAGCACGCGCGCTGCCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | GCAGGCCTTGTGCAGCGGGCTGCGCTCGTCCTCGTCACGCGCGTCTaGCGCCGCGCCGCCGCGCAGAAGGAGCGCGCACAGGCGCAGGCA | + |
Preference number: 5 (lower is better) Translates to: AGLVQRAALVLVTRV*RRAAAQKERAQAQA Trigger: TGCCTGCGCCTGTGCGCGCTCCTTCTGCGCGGCGGCGCGGCGGCAGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | GCCGCCACGTGCAGCGGTGTGTCTCGGCCAGGGCCACCCTCCAGCTaGACTGTCGCGCCGTGCTCCAGCAGCTCCCGAGCGCACCCAAGC | + |
Preference number: 5 (lower is better) Translates to: AATCSGVSRPGPPSS*TVAPCSSSSRAHPS Trigger: GCTTGGGTGCGCTCGGGAGCTGCTGGAGCACGGCGCGACAGTCCAGCTGGAGGGTGGCCCTGGCCGAGACACACCGCTGCACGTGGCGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCCGTGGGCAGC | + |
Preference number: 5 (lower is better) Translates to: WPWAAAMHSGVVSSR*YSRVQRPSSTPVGS Trigger: GCTGCCCACGGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS TCA 90 bp | CGCAGGACTCGTGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTGAGAGCCCAA | + |
Preference number: 5 (lower is better) Translates to: RRTRGRGPQRCTAVW*APAGTPGSKGLRAQ Trigger: TTGGGCTCTCAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS TCA 90 bp | GGGCACCACGACCTCCGGGACTGGCATTGGGATCAGCTTTGCGACTaGGCAGGTGTCGCACGCAGGACTCGTGGCCGTGGGCCGCAGCGA | + |
Preference number: 5 (lower is better) Translates to: GHHDLRDWHWDQLCD*AGVARRTRGRGPQR Trigger: TCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGGTCGTGGTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 90 bp | AGGCGGGTGTGCGGCATAGGTGCAGGGGTGCCAGGCCCTCGGAGTTaGGCAGATCTGGATCTGCTCCGTGCTGCAGCAGCAGTCGGGCGC | + |
Preference number: 5 (lower is better) Translates to: RRVCGIGAGVPGPRS*ADLDLLRAAAAVGR Trigger: GCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGCACCCCTGCACCTATGCCGCACACCCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 90 bp | CGCAGGACTCGTGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTAGCAGTACGC | + |
Preference number: 5 (lower is better) Translates to: RRTRGRGPQRCTAVW*APAGTPGSKGLAVR Trigger: GCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS CCA 90 bp | TGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTGAGAGCCCAAAGGTGGCCAGG | + |
Preference number: 5 (lower is better) Translates to: WPWAAAMHSGVVSSR*YSRVQRPESPKVAR Trigger: CCTGGCCACCTTTGGGCTCTCAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | GGTGCCAGGCCCTCGGAGTTGAGCAGATCTGGATCTGCTCCGTGCTaGAGCAGCAGTCGGGCGCAGGCGGTATGGTTCCCGAGACAGGCC | + |
Preference number: 5 (lower is better) Translates to: GARPSELSRSGSAPC*SSSRAQAVWFPRQA Trigger: GGCCTGTCTCGGGAACCATACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TCAGCTTTGCGACTGAGCAGGTGTCGCACGCAGGACTCGTGGCCGTaGGCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGCTGGTAC | + |
Preference number: 5 (lower is better) Translates to: SALRLSRCRTQDSWP*AAAMHSGVVSSRWY Trigger: GTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TTGGGATCAGCTTTGCGACTGAGCAGGTGTCGCACGCAGGACTCGTaGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGC | + |
Preference number: 5 (lower is better) Translates to: LGSALRLSRCRTQDS*PWAAAMHSGVVSSR Trigger: GCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 90 bp | CTCAGAACCTTGGGGAAGGCATCAGGCCACACGGAGCGGGATCCGTaGTTTAGTAGCACCTGGACCGTGCGCTGCGGCGCTGTCGGGGGC | + |
Preference number: 5 (lower is better) Translates to: LRTLGKASGHTERDP*FSSTWTVRCGAVGG Trigger: GCCCCCGACAGCGCCGCAGCGCACGGTCCAGGTGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAAGGTTCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | AGGGGTGCCAGGCCCTCGGAGTTGAGCAGATCTGGATCTGCTCCGTaGTGCAGCAGCAGTCGGGCGCAGGCGGTATGGTTCCCGAGACAG | + |
Preference number: 5 (lower is better) Translates to: RGARPSELSRSGSAP*CSSSRAQAVWFPRQ Trigger: CTGTCTCGGGAACCATACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGCACCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TCTGGATCTGCTCCGTGCTGCAGCAGCAGTCGGGCGCAGGCGGTATaGTTCCCGAGACAGGCCTCATGTAGGGCACCACGACCTCCGGGA | + |
Preference number: 5 (lower is better) Translates to: SGSAPCCSSSRAQAV*FPRQASCRAPRPPG Trigger: TCCCGGAGGTCGTGGTGCCCTACATGAGGCCTGTCTCGGGAACCATACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | ACCGCGTTGGCATCCCAGAAGCACTGGTCCATGAGGAGCCGGATGTaGTCCAGGTCTCCTAGCAGTACGCCCGTGGGCAGCTCGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: TALASQKHWSMRSRM*SRSPSSTPVGSSAE Trigger: CTCAGCCGAGCTGCCCACGGGCGTACTGCTAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086882.8 |
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CDS CCA 90 bp | TTTAGTAGCACCTGGACCGTGCGCAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCCGTGGGCAGC | + |
Preference number: 5 (lower is better) Translates to: FSSTWTVRSGVVSSR*YSRVQRPSSTPVGS Trigger: GCTGCCCACGGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGCGCACGGTCCAGGTGCTACTAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS-3UTR CAA 90 bp | CTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCTTCATTGCTGGGCGTGGCCGCAGGCCTaGTGCAGCGGGCTGCGCTCG | + |
Preference number: 5 (lower is better) Translates to: LGFNPRSSARAASALHCWAWPQA*CSGLRS Trigger: CGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGC...CCAGCAATGAAGAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | CTGGTCCATGAGGAGCCGGATGTGGTCCAGGTCTCCTGCCAGCAGTaGAGCGTGGAACGCAAGCTCGGGAGTCCCAGCTCTGATCTGTGG | + |
Preference number: 5 (lower is better) Translates to: LVHEEPDVVQVSCQQ*SVERKLGSPSSDLW Trigger: CCACAGATCAGAGCTGGGACTCCCGAGCTTGCGTTCCACGCTGCACTGCTGGCAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CCA 90 bp | ACCGCGTTGGCATCCCAGAAGCACTGGTCCATGAGGAGCCGGATGTaGTCCAGGTCTCCTGCCAGCAGTGCAGCGTGGAACGCAAGCTCG | + |
Preference number: 5 (lower is better) Translates to: TALASQKHWSMRSRM*SRSPASSAAWNASS Trigger: CGAGCTTGCGTTCCACGCTGCACTGCTGGCAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | TTGGCTCCAGGAGGGATGGGAGCCTCTCCTGTAAGTCCAAGAGTCAATAACCCAGCGTGGCCGCAGGCCTaGTGCAGCGGGCTGCGCTCG | + |
Preference number: 5 (lower is better) Translates to: LAPGGMGASPVSPRVNNPAWPQA*CSGLRS Trigger: CGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGC...TGGGTTATTGACTCTTGGACTTACAGGAGAGGCTCCCATCCCTCCTGGAGCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS TCA 90 bp | GGGATCCGTGATTTAGTAGCACCTGGACCGTGCGCAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTAGCAGTACGC | + |
Preference number: 5 (lower is better) Translates to: GIRDLVAPGPCAAVW*APAGTPGSKGLAVR Trigger: GCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGCGCACGGTCCAGGTGCTACTAAATCACGGATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS TCA 90 bp | CTCAGAACCTTGGGGAAGGCATCAGGCCACACGGAGCGGGATCCGTaGTTTAGTAGCACCTGGACCGTGCGCAGCGGTGTGGTGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: LRTLGKASGHTERDP*FSSTWTVRSGVVSS Trigger: GGAGCTCACCACACCGCTGCGCACGGTCCAGGTGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAAGGTTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS CCA 90 bp | GCGTGGAACGCAAGCTCGGGAGTCCCAGCTCTGATCTGTGGCTCTTaGCTCATCTTCTGCAAGATCTGCAGCTTTCTCCCAGCTGGCTCT | + |
Preference number: 5 (lower is better) Translates to: AWNASSGVPALICGS*LIFCKICSFLPAGS Trigger: AGAGCCAGCTGGGAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCGAGCTTGCGTTCCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CCA 90 bp | TCTCCGTTACTGATCTCAAACACCGCGTTGGCATCCCAGAAGCACTaGTCCATGAGGAGCCGGATGTGGTCCAGGTCTCCTGCCAGCAGT | + |
Preference number: 5 (lower is better) Translates to: SPLLISNTALASQKH*SMRSRMWSRSPASS Trigger: ACTGCTGGCAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGATCAGTAACGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | TACCATCCTCCGGTGTCCTGTGAGTGCTGGGCTCTCCTGTGTTTGCAAGCACAACCTCCGGGACTGGCATaGGGATCAGCTTTGCGACTG | + |
Preference number: 5 (lower is better) Translates to: YHPPVSCECWALLCLQAQPPGLA*GSALRL Trigger: CAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGG...TTGTGCTTGCAAACACAGGAGAGCCCAGCACTCACAGGACACCGGAGGATGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | CCAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGAAGCCCAGGTAGAGTaGCGCGTGCTCGTCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: PGFCPSHRTSAERGRCREEAQVE*RVLVQA Trigger: GGCCTGGACGAGCACGCGCAACTCTACCTGGGCTTC...TTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | CCAGGTAAGTGCTGGGATTCAATCCCAGGTCCTCTGCAAGAGCAGCCAGTGCTCCATGTCCTCAGAACCTaGGGGAAGGCATCAGGCCAC | + |
Preference number: 5 (lower is better) Translates to: PGKCWDSIPGPLQEQPVLHVLRT*GKASGH Trigger: GTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACATG...GAGCACTGGCTGCTCTTGCAGAGGACCTGGGATTGAATCCCAGCACTTACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 90 bp | AGGGTCCAAAGGCCTGAGAGCCCAAAGGTGGCCAGGGATGTCACCTaGCATTCCATCTCTCCGTTACTGATCTCAAACACCGCGTTGGCA | + |
Preference number: 5 (lower is better) Translates to: RVQRPESPKVARDVT*HSISPLLISNTALA Trigger: TGCCAACGCGGTGTTTGAGATCAGTAACGGAGAGATGGAATGGCAGGTGACATCCCTGGCCACCTTTGGGCTCTCAGGCCTTTGGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 90 bp | TCTCCGTTACTGATCTCAAACACCGCGTTGGCATCCCAGAAGCACTaGTCCATGAGGAGCCGGATGTGGTCCAGGTCTCCTAGCAGTACG | + |
Preference number: 5 (lower is better) Translates to: SPLLISNTALASQKH*SMRSRMWSRSPSST Trigger: CGTACTGCTAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGATCAGTAACGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086882.8 |
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CDS-3UTR CAA 90 bp | GTGAACGCTCTCCTTGCCGAAGAGTTTTCGGATAGTACAGCGGCAAAGGTGCTGCCTCCGGGACTGGCATaGGGATCAGCTTTGCGACTG | + |
Preference number: 5 (lower is better) Translates to: VNALLAEEFSDSTAAKVLPPGLA*GSALRL Trigger: CAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGG...CAGCACCTTTGCCGCTGTACTATCCGAAAACTCTTCGGCAAGGAGAGCGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS-3UTR CAA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGGAAGCCCAGGTAGAGTaGCGCGTGCTCGTCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAEAQVE*RVLVQA Trigger: GGCCTGGACGAGCACGCGCAACTCTACCTGGGCTTC...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | TTGGTCAGGTCGGATGGGATGGGCAAGGAAGGACAAACAGGCCTTGGGTCTATGATCTCAAACACCGCGTaGGCATCCCAGAAGCACTGG | + |
Preference number: 5 (lower is better) Translates to: LVRSDGMGKEGQTGLGSMISNTA*ASQKHW Trigger: CCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGAT...CATAGACCCAAGGCCTGTTTGTCCTTCCTTGCCCATCCCATCCGACCTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | CAGCCTCAACAGGTGGACTCTACTTGGTCCCTGTTCTTATTTTCATTGTGGGCGGCCAGGCCCTCGGAGTaGAGCAGATCTGGATCTGCT | + |
Preference number: 5 (lower is better) Translates to: QPQQVDSTWSLFLFSLWAARPSE*SRSGSA Trigger: AGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGC...CGCCCACAATGAAAATAAGAACAGGGACCAAGTAGAGTCCACCTGTTGAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | CAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAAGCATGTCCTCAGAACCTaGGGGAAGGCATCAGGCCAC | + |
Preference number: 5 (lower is better) Translates to: QGSVPHIEPLQKGEDAEKHVLRT*GKASGH Trigger: GTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACATG...CTTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | CCAGGGTTCTGTCCCTCACATAGAACCTCTGCAGAAAGGGGAAGATGCAGAGAACATGTCCTCAGAACCTaGGGGAAGGCATCAGGCCAC | + |
Preference number: 5 (lower is better) Translates to: PGFCPSHRTSAERGRCREHVLRT*GKASGH Trigger: GTGGCCTGATGCCTTCCCCAAGGTTCTGAGGACATG...TTCTCTGCATCTTCCCCTTTCTGCAGAGGTTCTATGTGAGGGACAGAACCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACATCTCAAACACCGCGTaGGCATCCCAGAAGCACTGG | + |
Preference number: 5 (lower is better) Translates to: ESLTKEVALFGLRVTSLHISNTA*ASQKHW Trigger: CCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGAT...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS-3UTR CAA 90 bp | GAGAGTCTAACAAAGGAGGTGGCCCTGTTTGGCCTTAGGGTGACTAGTTTGCACTCTGATCTGTGGCTCTaGGCTCATCTTCTGCAAGAT | + |
Preference number: 5 (lower is better) Translates to: ESLTKEVALFGLRVTSLHSDLWL*AHLLQD Trigger: ATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGA...GTGCAAACTAGTCACCCTAAGGCCAAACAGGGCCACCTCCTTTGTTAGACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CAA 90 bp | CGCAGCAGGAGCGTGCACAGGCCGGGGCGCGCGTGGCCGCAGGCCTaGTGCAGCGGGCTGCGCTCGTCCTCGTCACGCGCGTCTGCCGCC | + |
Preference number: 6 (lower is better) Translates to: RSRSVHRPGRAWPQA*CSGLRSSSSRASAA Trigger: GGCGGCAGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCACGCTCCTGCTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | GTGCAGCGGGCTGCGCTCGTCCTCGTCACGCGCGTCTaGCGCCGCGCCGCCGCGCAGAAGGAGCGCGCACAG | + |
Preference number: 6 (lower is better) Translates to: VQRAALVLVTRV*RRAAAQKERAQ Trigger: CTGTGCGCGCTCCTTCTGCGCGGCGGCGCGGCGGCAGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | TGCCGCAGCAGGAGCGTGCACAGGCCGGGGCGCGCGTaGCCGCAGGCCTTGTGCAGCGGGCTGCGCTCGTCC | + |
Preference number: 6 (lower is better) Translates to: CRSRSVHRPGRA*PQALCSGLRSS Trigger: GGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCACGCTCCTGCTGCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | TGCGCGTGCTCGTCCAGGCCGCGCTGGGCCGCCACGTaGAGCGGTGTGTCTCGGCCAGGGCCACCCTCCAGC | + |
Preference number: 6 (lower is better) Translates to: CACSSRPRWAAT*SGVSRPGPPSS Trigger: GCTGGAGGGTGGCCCTGGCCGAGACACACCGCTGCACGTGGCGGCCCAGCGCGGCCTGGACGAGCACGCGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | CGCGTGCTCGTCGGGGCTCCGCGCCGCCGCTCCGCATaGTGCGCTAAGGGCCGTTTCGCCCCGGCCGTTCCT | + |
Preference number: 6 (lower is better) Translates to: RVLVGAPRRRSA*CAKGRFAPAVP Trigger: AGGAACGGCCGGGGCGAAACGGCCCTTAGCGCAGCATGCGGAGCGGCGGCGCGGAGCCCCGACGAGCACGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | GTGCACAGGCCGGGGCGCGCGTGGCCGCAGGCCTTGTaGAGCGGGCTGCGCTCGTCCTCGTCACGCGCGTCT | + |
Preference number: 6 (lower is better) Translates to: VHRPGRAWPQAL*SGLRSSSSRAS Trigger: AGACGCGCGTGACGAGGACGAGCGCAGCCCGCTGCACAAGGCCTGCGGCCACGCGCGCCCCGGCCTGTGCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CAA 72 bp | CCTCGCGTCCACTCGCGCGCCGAAGCCCAGGTAGAGTaGCGCGTGCTCGTCCAGGCCGCGCTGGGCCGCCAC | + |
Preference number: 6 (lower is better) Translates to: PRVHSRAEAQVE*RVLVQAALGRH Trigger: GTGGCGGCCCAGCGCGGCCTGGACGAGCACGCGCAACTCTACCTGGGCTTCGGCGCGCGAGTGGACGCGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | CCAGCAGCTCCCGAGCGCACCCAAGCGAGGCGGGTGTaGGGCATAGGTGCAGGGGTGCCAGGCCCTCGGAGT | + |
Preference number: 6 (lower is better) Translates to: PAAPERTQARRV*GIGAGVPGPRS Trigger: ACTCCGAGGGCCTGGCACCCCTGCACCTATGCCGCACACCCGCCTCGCTTGGGTGCGCTCGGGAGCTGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | CGGAGCGGGATCCGTGATTTAGTAGCACCTGGACCGTaGGCTGCGGCGCTGTCGGGGGCGCGCACGTGGCCG | + |
Preference number: 6 (lower is better) Translates to: RSGIRDLVAPGP*AAALSGARTWP Trigger: CGGCCACGTGCGCGCCCCCGACAGCGCCGCAGCGCACGGTCCAGGTGCTACTAAATCACGGATCCCGCTCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | TGCAGCGGTGTGTCTCGGCCAGGGCCACCCTCCAGCTaGACTGTCGCGCCGTGCTCCAGCAGCTCCCGAGCG | + |
Preference number: 6 (lower is better) Translates to: CSGVSRPGPPSS*TVAPCSSSSRA Trigger: CGCTCGGGAGCTGCTGGAGCACGGCGCGACAGTCCAGCTGGAGGGTGGCCCTGGCCGAGACACACCGCTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | CGTGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTG | + |
Preference number: 6 (lower is better) Translates to: RGRGPQRCTAVW*APAGTPGSKGL Trigger: CAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | CGACTGAGCAGGTGTCGCACGCAGGACTCGTGGCCGTaGGCCGCAGCGATGCACAGCGGTGTGGTGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: RLSRCRTQDSWP*AAAMHSGVVSS Trigger: GGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | CGTGGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTA | + |
Preference number: 6 (lower is better) Translates to: RGRGPQRCTAVW*APAGTPGSKGL Trigger: TAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS GCA 72 bp | GGGTGCCAGGCCCTCGGAGTTGAGCAGATCTGGATCTaGTCCGTGCTGCAGCAGCAGTCGGGCGCAGGCGGT | + |
Preference number: 6 (lower is better) Translates to: GCQALGVEQIWI*SVLQQQSGAGG Trigger: ACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | GCTTTGCGACTGAGCAGGTGTCGCACGCAGGACTCGTaGCCGTGGGCCGCAGCGATGCACAGCGGTGTGGTG | + |
Preference number: 6 (lower is better) Translates to: ALRLSRCRTQDS*PWAAAMHSGVV Trigger: CACCACACCGCTGTGCATCGCTGCGGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | GCTCCGTGCTGCAGCAGCAGTCGGGCGCAGGCGGTATaGTTCCCGAGACAGGCCTCATGTAGGGCACCACGA | + |
Preference number: 6 (lower is better) Translates to: APCCSSSRAQAV*FPRQASCRAPR Trigger: TCGTGGTGCCCTACATGAGGCCTGTCTCGGGAACCATACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | GTGCAGGGGTGCCAGGCCCTCGGAGTTGAGCAGATCTaGATCTGCTCCGTGCTGCAGCAGCAGTCGGGCGCA | + |
Preference number: 6 (lower is better) Translates to: VQGCQALGVEQI*ICSVLQQQSGA Trigger: TGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCTGGCACCCCTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | ACCTGGACCGTGCGCAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCC | + |
Preference number: 6 (lower is better) Translates to: TWTVRSGVVSSR*YSRVQRPSSTP Trigger: GGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGCGCACGGTCCAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS CCA 72 bp | CACCTGGACCGTGCGAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCC | + |
Preference number: 6 (lower is better) Translates to: HLDRASGVVSSR*YSRVQRPSSTP Trigger: GGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTCGCACGGTCCAGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151330.2 |
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CDS CCA 72 bp | GCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCC | + |
Preference number: 6 (lower is better) Translates to: AAAMHSGVVSSR*YSRVQRPSSTP Trigger: GGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154228.8 |
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CDS TCA 72 bp | GACCTCCGGGACTGGCATTGGGATCAGCTTTGCGACTaGGCAGGTGTCGCACGCAGGACTCGTGGCCGTGGG | + |
Preference number: 6 (lower is better) Translates to: DLRDWHWDQLCD*AGVARRTRGRG Trigger: CCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | GCCGCAGCGATGCACAGCGGTGTGGTGAGCTCCCGCTaGTACTCCAGGGTCCAAAGGCCTGAGAGCCCAAAG | + |
Preference number: 6 (lower is better) Translates to: AAAMHSGVVSSR*YSRVQRPESPK Trigger: CTTTGGGCTCTCAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGTGCATCGCTGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CAA 90 bp | TCATGTAGGGCACCACGACCTCCGGGACTGGCATTGGGATCAGCTTaGCGACTGAGCAGGTGTCGCACGCAGGACTCGTGGCCGTGGGCC | + |
Preference number: 6 (lower is better) Translates to: SCRAPRPPGLALGSA*RLSRCRTQDSWPWA Trigger: GGCCCACGGCCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGGTCGTGGTGCCCTACATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | TTGGGGAAGGCATCAGGCCACACGGAGCGGGATCCGTaGTTTAGTAGCACCTGGACCGTGCGCTGCGGCGCT | + |
Preference number: 6 (lower is better) Translates to: LGKASGHTERDP*FSSTWTVRCGA Trigger: AGCGCCGCAGCGCACGGTCCAGGTGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | AGGCCCTCGGAGTTGAGCAGATCTGGATCTGCTCCGTaGTGCAGCAGCAGTCGGGCGCAGGCGGTATGGTTC | + |
Preference number: 6 (lower is better) Translates to: RPSELSRSGSAP*CSSSRAQAVWF Trigger: GAACCATACCGCCTGCGCCCGACTGCTGCTGCAGCACGGAGCAGATCCAGATCTGCTCAACTCCGAGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | GCCGGATGTGGTCCAGGTCTCCTAGCAGTACGCCCGTaGGCAGCTCGGCTGAGGGCTCCTTCATCCAGTCAT | + |
Preference number: 6 (lower is better) Translates to: AGCGPGLLAVRP*AARLRAPSSSH Trigger: ATGACTGGATGAAGGAGCCCTCAGCCGAGCTGCCCACGGGCGTACTGCTAGGAGACCTGGACCACATCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086882.8 |
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CDS CCA 72 bp | GCATCCCAGAAGCACTGGTCCATGAGGAGCCGGATGTaGTCCAGGTCTCCTAGCAGTACGCCCGTGGGCAGC | + |
Preference number: 6 (lower is better) Translates to: ASQKHWSMRSRM*SRSPSSTPVGS Trigger: GCTGCCCACGGGCGTACTGCTAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086882.8 |
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CDS CAA 72 bp | GCACCACGACCTCCGGGACTGGCATTGGGATCAGCTTaGCGACTGAGCAGGTGTCGCACGCAGGACTCGTGG | + |
Preference number: 6 (lower is better) Translates to: APRPPGLALGSA*RLSRCRTQDSW Trigger: CCACGAGTCCTGCGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGGTCGTGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | TTGGGGAAGGCATCAGGCCACACGGAGCGGGATCCGTaGTTTAGTAGCACCTGGACCGTGCGCAGCGGTGTG | + |
Preference number: 6 (lower is better) Translates to: LGKASGHTERDP*FSSTWTVRSGV Trigger: CACACCGCTGCGCACGGTCCAGGTGCTACTAAATCACGGATCCCGCTCCGTGTGGCCTGATGCCTTCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS CCA 72 bp | GGTACTCCAGGGTCCAAAGGCCTAGCAGTACGCCCGTaGGCAGCTCGGCTGAGGGCTCCTTCATCCAGTCAT | + |
Preference number: 6 (lower is better) Translates to: GTPGSKGLAVRP*AARLRAPSSSH Trigger: ATGACTGGATGAAGGAGCCCTCAGCCGAGCTGCCCACGGGCGTACTGCTAGGCCTTTGGACCCTGGAGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097656.10 ENSMUST00000151330.2 ENSMUST00000154228.8 |
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CDS CCA 72 bp | GCATCCCAGAAGCACTGGTCCATGAGGAGCCGGATGTaGTCCAGGTCTCCTGCCAGCAGTGCAGCGTGGAAC | + |
Preference number: 6 (lower is better) Translates to: ASQKHWSMRSRM*SRSPASSAAWN Trigger: GTTCCACGCTGCACTGCTGGCAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CAA 72 bp | GCCTCATGTAGGGCACCACGACCTCCGGGACTGGCATaGGGATCAGCTTTGCGACTGAGCAGGTGTCGCACG | + |
Preference number: 6 (lower is better) Translates to: ASCRAPRPPGLA*GSALRLSRCRT Trigger: CGTGCGACACCTGCTCAGTCGCAAAGCTGATCCCAATGCCAGTCCCGGAGGTCGTGGTGCCCTACATGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086882.8 ENSMUST00000154228.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | GATTTAGTAGCACCTGGACCGTGCGCAGCGGTGTGGTaGGCTCCCGCTGGTACTCCAGGGTCCAAAGGCCTA | + |
Preference number: 6 (lower is better) Translates to: DLVAPGPCAAVW*APAGTPGSKGL Trigger: TAGGCCTTTGGACCCTGGAGTACCAGCGGGAGCTCACCACACCGCTGCGCACGGTCCAGGTGCTACTAAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097656.10 |
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CDS TCA 72 bp | CAAACACCGCGTTGGCATCCCAGAAGCACTGGTCCATaGGGAGCCGGATGTGGTCCAGGTCTCCTGCCAGCA | + |
Preference number: 6 (lower is better) Translates to: QTPRWHPRSTGP*GAGCGPGLLPA Trigger: TGCTGGCAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CAA 90 bp | AGCGTGGAACGCAAGCTCGGGAGTCCCAGCTCTGATCTGTGGCTCTaGGCTCATCTTCTGCAAGATCTGCAGCTTTCTCCCAGCTGGCTC | + |
Preference number: 6 (lower is better) Translates to: SVERKLGSPSSDLWL*AHLLQDLQLSPSWL Trigger: GAGCCAGCTGGGAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCGAGCTTGCGTTCCACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS TCA 72 bp | CAAACACCGCGTTGGCATCCCAGAAGCACTGGTCCATaGGGAGCCGGATGTGGTCCAGGTCTCCTAGCAGTA | + |
Preference number: 6 (lower is better) Translates to: QTPRWHPRSTGP*GAGCGPGLLAV Trigger: TACTGCTAGGAGACCTGGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086882.8 |
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CDS CAA 90 bp | GTCACCTGCCATTCCATCTCTCCGTTACTGATCTCAAACACCGCGTaGGCATCCCAGAAGCACTGGTCCATGAGGAGCCGGATGTGGTCC | + |
Preference number: 6 (lower is better) Translates to: VTCHSISPLLISNTA*ASQKHWSMRSRMWS Trigger: GGACCACATCCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGATCAGTAACGGAGAGATGGAATGGCAGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CAA 72 bp | CGCAAGCTCGGGAGTCCCAGCTCTGATCTGTGGCTCTaGGCTCATCTTCTGCAAGATCTGCAGCTTTCTCCC | + |
Preference number: 6 (lower is better) Translates to: RKLGSPSSDLWL*AHLLQDLQLSP Trigger: GGGAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCGAGCTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS GCA 72 bp | AGGCCTGAGAGCCCAAAGGTGGCCAGGGATGTCACCTaGCATTCCATCTCTCCGTTACTGATCTCAAACACC | + |
Preference number: 6 (lower is better) Translates to: RPESPKVARDVT*HSISPLLISNT Trigger: GGTGTTTGAGATCAGTAACGGAGAGATGGAATGGCAGGTGACATCCCTGGCCACCTTTGGGCTCTCAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS GCA 72 bp | GTCCCAGCTCTGATCTGTGGCTCTTGGCTCATCTTCTaGAAGATCTGCAGCTTTCTCCCAGCTGGCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: VPALICGSWLIF*KICSFLPAGSG Trigger: ACCAGAGCCAGCTGGGAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CCA 72 bp | GCAAGCTCGGGAGTCCCAGCTCTGATCTGTGGCTCTTaGCTCATCTTCTGCAAGATCTGCAGCTTTCTCCCA | + |
Preference number: 6 (lower is better) Translates to: ASSGVPALICGS*LIFCKICSFLP Trigger: TGGGAGAAAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCGAGCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CCA 72 bp | GTGGAACGCAAGCTCGGGAGTCCCAGCTCTGATCTGTaGCTCTTGGCTCATCTTCTGCAAGATCTGCAGCTT | + |
Preference number: 6 (lower is better) Translates to: VERKLGSPSSDL*LLAHLLQDLQL Trigger: AAGCTGCAGATCTTGCAGAAGATGAGCCAAGAGCCACAGATCAGAGCTGGGACTCCCGAGCTTGCGTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238685.2 |
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CDS CAA 72 bp | CATTCCATCTCTCCGTTACTGATCTCAAACACCGCGTaGGCATCCCAGAAGCACTGGTCCATGAGGAGCCGG | + |
Preference number: 6 (lower is better) Translates to: HSISPLLISNTA*ASQKHWSMRSR Trigger: CCGGCTCCTCATGGACCAGTGCTTCTGGGATGCCAACGCGGTGTTTGAGATCAGTAACGGAGAGATGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS TCA 72 bp | CCAGGGATGTCACCTGCCATTCCATCTCTCCGTTACTaGTCTCAAACACCGCGTTGGCATCCCAGAAGCACT | + |
Preference number: 6 (lower is better) Translates to: PGMSPAIPSLRY*SQTPRWHPRST Trigger: AGTGCTTCTGGGATGCCAACGCGGTGTTTGAGATCAGTAACGGAGAGATGGAATGGCAGGTGACATCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086882.8 ENSMUST00000238685.2 |
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CDS CCA 72 bp | TGCAGATCAGCTTCTGTACAGTGTCCTCGTCCCCAGTaGCCAGAGCAGACTTTAATCTCCTCACTATGTCTG | + |
Preference number: 6 (lower is better) Translates to: CRSASVQCPRPQ*PEQTLISSLCL Trigger: CAGACATAGTGAGGAGATTAAAGTCTGCTCTGGCCACTGGGGACGAGGACACTGTACAGAAGCTGATCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086882.8 ENSMUST00000097656.10 ENSMUST00000151330.2 ENSMUST00000154228.8 |