Pregenerated sensors for ASB17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038997Ensembl transcript IDs: ENSMUST00000044089.4, ENSMUST00000198849.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAGACCCCTTGTCCACAAAGACTGCTTTGCTGTGGTCTCAGCTaGCCAGCCAGGCACAGACCTGCCTCCCCTAAGGCTTTCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: AETPCPQRLLCCGLS*PARHRPASPKAFLQ Trigger: CTGGAGGAAAGCCTTAGGGGAGGCAGGTCTGTGCCTGGCTGGCCAGCTGAGACCACAGCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 90 bp | GCAAGCCAGCTGAAGACATCAAGCTGTCATGATGGAGGTGAGCACTaGGAAGCAGCTCTTCTTGGCTTTCAGATCTACTGCTGTCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ASQLKTSSCHDGGEH*EAALLGFQIYCCLC Trigger: GCAAAGACAGCAGTAGATCTGAAAGCCAAGAAGAGCTGCTTCCCAGTGCTCACCTCCATCATGACAGCTTGATGTCTTCAGCTGGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 90 bp | TTTATGAGTTCTAGCAAACATACAGACGTGTCTGGCCTCCGCAGTTaGGATGAGCAGAGACCCCTTGTCCACAAAGACTGCTTTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: FMSSSKHTDVSGLRS*DEQRPLVHKDCFAV Trigger: CACAGCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCTCATCTCAACTGCGGAGGCCAGACACGTCTGTATGTTTGCTAGAACTCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR GCA 90 bp | GGCCAGCCAGGCACAGACCTGCCTCCCCTAAGGCTTTCCTCCAGATaGCCAACTCTTTCTGAATATTATGTTATTATGCCAAAACAGATC | + |
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Preference number: 1 (lower is better) Translates to: GQPGTDLPPLRLSSR*PTLSEYYVIMPKQI Trigger: GATCTGTTTTGGCATAATAACATAATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCCTTAGGGGAGGCAGGTCTGTGCCTGGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 90 bp | TTCGGAGGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTaGTCTTCAGAGCAAGTTCTAAGACAACCAAGACTACACAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FGGRDRQISVSSRPA*SSEQVLRQPRLHRE Trigger: TTCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCCTCCGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 90 bp | CAGTTGGGTCCTGATGGTTATTCTGCAAAGGTGGACGAGTTCACATaGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAACCAATTTTG | + |
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Preference number: 1 (lower is better) Translates to: QLGPDGYSAKVDEFT*ILVSCWRDVVQPIL Trigger: CAAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCGTCCACCTTTGCAGAATAACCATCAGGACCCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR CCA 90 bp | TATTCTGCAAAGGTGGACGAGTTCACATGGATCCTTGTATCTTGTTaGCGGGATGTAGTCCAACCAATTTTGAATAATTGGGCGTCGTCC | + |
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Preference number: 1 (lower is better) Translates to: YSAKVDEFTWILVSC*RDVVQPILNNWASS Trigger: GGACGACGCCCAATTATTCAAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCGTCCACCTTTGCAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR TCA 90 bp | AAAATATTCCATTTGGGAGCATATTGTTGGCCAGCAGTTGGGTCCTaGTGGTTATTCTGCAAAGGTGGACGAGTTCACATGGATCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: KIFHLGAYCWPAVGS*WLFCKGGRVHMDPC Trigger: ACAAGGATCCATGTGAACTCGTCCACCTTTGCAGAATAACCATCAGGACCCAACTGCTGGCCAACAATATGCTCCCAAATGGAATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR TCA 90 bp | AGACCTGCCTCCCCTAAGGCTTTCCTCCAGATGCCCAACTCTTTCTaGATATTATGTTATTATGCCAAAACAGATCTCCTTTATCTAATG | + |
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Preference number: 1 (lower is better) Translates to: RPASPKAFLQMPNSF*ILCYYAKTDLLYLM Trigger: CATTAGATAAAGGAGATCTGTTTTGGCATAATAACATAATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCCTTAGGGGAGGCAGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 90 bp | GAAAGCACTCTGGAACATAGCATTAAACATGTCTTGGCATCTTCTTaGATGTCAATCAACTCGTGGTCAACCATTATTCTCACTCTCGAA | + |
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Preference number: 1 (lower is better) Translates to: ESTLEHSIKHVLASS*MSINSWSTIILTLE Trigger: TTCGAGAGTGAGAATAATGGTTGACCACGAGTTGATTGACATTCAAGAAGATGCCAAGACATGTTTAATGCTATGTTCCAGAGTGCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR GCA 90 bp | GGCTTTCCTCCAGATGCCCAACTCTTTCTGAATATTATGTTATTATaGCAAAACAGATCTCCTTTATCTAATGCATGTAATTACTGCATG | + |
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Preference number: 1 (lower is better) Translates to: GFPPDAQLFLNIMLL*QNRSPLSNACNYCM Trigger: CATGCAGTAATTACATGCATTAGATAAAGGAGATCTGTTTTGGCATAATAACATAATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR GCA 90 bp | TTATTATGCCAAAACAGATCTCCTTTATCTAATGCATGTAATTACTaGATGGATGCTAATGGGGTAAAGTTGCATGGTAACTATAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LLCQNRSPLSNACNY*MDANGVKLHGNYSA Trigger: AGCACTATAGTTACCATGCAACTTTACCCCATTAGCATCCATGCAGTAATTACATGCATTAGATAAAGGAGATCTGTTTTGGCATAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CAA 90 bp | TCCGCAGTTGAGATGAGCAGAGACCCCTTGTCCACAAAGACTGCTTaGCTGTGGTCTCAGCTGGCCAGCCAGGCACAGACCTGCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SAVEMSRDPLSTKTA*LWSQLASQAQTCLP Trigger: GGGGAGGCAGGTCTGTGCCTGGCTGGCCAGCTGAGACCACAGCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCTCATCTCAACTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CAA 90 bp | ATACAGACGTGTCTGGCCTCCGCAGTTGAGATGAGCAGAGACCCCTaGTCCACAAAGACTGCTTTGCTGTGGTCTCAGCTGGCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: IQTCLASAVEMSRDP*STKTALLWSQLASQ Trigger: CTGGCTGGCCAGCTGAGACCACAGCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCTCATCTCAACTGCGGAGGCCAGACACGTCTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGAATGGTGGTGTATACGTTTAATCCCACCACTTCGGAGGCAGAGACAGGCATCTGGCCTCCGCAGTTaGGATGAGCAGAGACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: REWWCIRLIPPLRRQRQASGLRS*DEQRPL Trigger: AAGGGGTCTCTGCTCATCTCAACTGCGGAGGCCAGA...TGCCTGTCTCTGCCTCCGAAGTGGTGGGATTAAACGTATACACCACCATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAACAGGGCCCCTGGAACTaGAGTCATGGGAGATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: GRDRQISVSSRPAWSSEQQGPWN*SHGRLL Trigger: TAGCAATCTCCCATGACTCCAGTTCCAGGGGCCCTG...TTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGAATGGGATCTATCAGTTTCGAACCACGCCTCTCCTGACCCCCACTCCATTTTTGTGTGTGCCATGTaGATGCCTGATGCCCACGGA | + |
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Preference number: 2 (lower is better) Translates to: PEWDLSVSNHASPDPHSIFVCAM*MPDAHG Trigger: TCCGTGGGCATCAGGCATGCACATGGCACACACAAA...AATGGAGTGGGGGTCAGGAGAGGCGTGGTTCGAAACTGATAGATCCCATTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTTTAGGATGAGGAGCCTTGCTAGAGGGAGTATGGCACTGGGGGCTGGGCTGGAACTGGAGTCATaGGAGATTGCTAACACGCGT | + |
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Preference number: 2 (lower is better) Translates to: RTFRMRSLARGSMALGAGLELES*EIANTR Trigger: ACGCGTGTTAGCAATCTCCCATGACTCCAGTTCCAG...CCCAGCCCCCAGTGCCATACTCCCTCTAGCAAGGCTCCTCATCCTAAAAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | ATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGTTCTAAGACAACCAGAACCACGCCTCTCCTaGCCCCCACTCCATTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ISVSSRPAWSSEQVLRQPEPRLS*PPLHCG Trigger: TCCACAATGGAGTGGGGGTCAGGAGAGGCGTGGTTC...TGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CAA 90 bp | CTTCGGAGGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTaGGTCTTCAGAGCAAGTTCTAAGACAACCAAGACTACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LRRQRQADICEFQAS*VFRASSKTTKTTQR Trigger: TCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCCTCCGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTTTAGGATGAGGAGCCTTGCTAGAGGGAGTATGGCACTGGGGGCTGGGAGGCTTTCCTCCAGATaGCCAACTCTTTCTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: RTFRMRSLARGSMALGAGRLSSR*PTLSEY Trigger: ATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCCT...CCCAGCCCCCAGTGCCATACTCCCTCTAGCAAGGCTCCTCATCCTAAAAGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTACTTTTCTGCTTCCTGAATGGGATCTATCAGTTTCGAACCACGCCTCTACCCCCACTCCATTGTaGACATGTAGCCTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CPTFLLPEWDLSVSNHASTPTPL*TCSLSG Trigger: TCCAGAGAGGCTACATGTCCACAATGGAGTGGGGGT...AGAGGCGTGGTTCGAAACTGATAGATCCCATTCAGGAAGCAGAAAAGTAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCTTATGCCATGTGCATGCCTaGTGCCCACGGAGGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IDKHPTIQPFTVTAHNVLCHVHA*CPRRSE Trigger: TTCTGACCTCCGTGGGCATCAGGCATGCACATGGCA...TAAGACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | ATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCTTAAGGCATCAGGGCCCCTaGAACTGGAGTCATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: IDKHPTIQPFTVTAHNVLRHQGP*NWSHGR Trigger: TCTCCCATGACTCCAGTTCCAGGGGCCCTGATGCCT...TAAGACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGAATGGTGGTGTATACGTTTAATCCCACCACTTCGGAGGCAGAGACAGGCATTTCTGCTTCCTGAATaGGATCTATCAGTTTCGAAC | + |
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Preference number: 2 (lower is better) Translates to: REWWCIRLIPPLRRQRQAFLLPE*DLSVSN Trigger: GTTCGAAACTGATAGATCCCATTCAGGAAGCAGAAA...TGCCTGTCTCTGCCTCCGAAGTGGTGGGATTAAACGTATACACCACCATTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGAATGGTGGTGTATACGTTTAATCCCACCACTTCGGAGGCAGAGACAGGCACTGTGGTGTTTTGAATaGGAAAGATCATTAGGCATA | + |
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Preference number: 2 (lower is better) Translates to: REWWCIRLIPPLRRQRQALWCFE*ERSLGI Trigger: TATGCCTAATGATCTTTCTCATTCAAAACACCACAG...TGCCTGTCTCTGCCTCCGAAGTGGTGGGATTAAACGTATACACCACCATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCTTATTGGTCCCTAGTTGGTaGCACTGTTTGGGAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: IDKHPTIQPFTVTAHNVLLVPSW*HCLGRL Trigger: CAACCTTCCCAAACAGTGTCACCAACTAGGGACCAA...TAAGACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAAAAGCAGACTTACTAAGCTGGGGAGAGGGAATGGTGGTGTATACGTTTACAAAGCAAGCCAGCTaGAGACATCAAGCTGTCATG | + |
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Preference number: 2 (lower is better) Translates to: KLKADLLSWGEGMVVYTFTKQAS*RHQAVM Trigger: CATGACAGCTTGATGTCTTCAGCTGGCTTGCTTTGT...AAACGTATACACCACCATTCCCTCTCCCCAGCTTAGTAAGTCTGCTTTTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR GCA 90 bp | GTTATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCCTTGTCCACAAAGACTaGTTTGCTGTGGTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VIDKHPTIQPFTVTAHNVLVHKD*FAVVSA Trigger: AGCTGAGACCACAGCAAAGCAGTCTTTGTGGACAAG...GACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAAAAGCAGACTTACTAAGCTGGGGAGAGGGAATGGTGGTGTATACGTTTGGAAGCAGCTCTTCTTaGCTTTCAGATCTACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KLKADLLSWGEGMVVYTFGSSSS*LSDLLL Trigger: CAGCAGTAGATCTGAAAGCCAAGAAGAGCTGCTTCC...AAACGTATACACCACCATTCCCTCTCCCCAGCTTAGTAAGTCTGCTTTTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCTAGGATTCCATACTGCAGGAGAATTTTTAAGATATTTGACTGTCTTGGGCAGTACACAGGTGTaGAGGTTCTCTCTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: LFLGFHTAGEFLRYLTVLGSTQV*RFSLWT Trigger: TGTCCAGAGAGAGAACCTTCACACCTGTGTACTGCC...CAAGACAGTCAAATATCTTAAAAATTCTCCTGCAGTATGGAATCCTAGAAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAACCAATTTTGAATAATGTCTTGGCATCTTCTTaGATGTCAATCAACTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: TWILVSCWRDVVQPILNNVLASS*MSINSW Trigger: CCACGAGTTGATTGACATTCAAGAAGATGCCAAGAC...ATTATTCAAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGAGCAAGTTCTAAGACAACCAAGACTACACAGAGAAACCTTATCTCAATATTCATTGAGCACTTaGTCCCTAGTTGGTGACACT | + |
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Preference number: 2 (lower is better) Translates to: SSEQVLRQPRLHRETLSQYSLST*SLVGDT Trigger: AGTGTCACCAACTAGGGACCAAGTGCTCAATGAATA...TTGAGATAAGGTTTCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTCTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTTATTAACTTCTAAATTGTACCATGCTACCATCCTAAGGGACAGTGTAGTGGACGAGTTCACATaGATCCTTGTATCTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: NSLLTSKLYHATILRDSVVDEFT*ILVSCW Trigger: CCAACAAGATACAAGGATCCATGTGAACTCGTCCAC...TACACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR CCA 72 bp | ATGCCCACGGAGGTCAGAAGCAGGCATCAGGGCCCCTaGAACTGGAGTCATGGGAGATTGCTAACACGCGTG | + |
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Preference number: 3 (lower is better) Translates to: MPTEVRSRHQGP*NWSHGRLLTRV Trigger: CACGCGTGTTAGCAATCTCCCATGACTCCAGTTCCAGGGGCCCTGATGCCTGCTTCTGACCTCCGTGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 72 bp | AGCAGAGACCCCTTGTCCACAAAGACTGCTTTGCTGTaGTCTCAGCTGGCCAGCCAGGCACAGACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SRDPLSTKTALL*SQLASQAQTCL Trigger: GAGGCAGGTCTGTGCCTGGCTGGCCAGCTGAGACCACAGCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | CTAGAGGGAGTATGGCACTGGGGGCTGGGCGGGAGGTaGGGGGTAGACTTTAAGAATCTACACCTTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LEGVWHWGLGGR*GVDFKNLHLAP Trigger: TGGAGCAAGGTGTAGATTCTTAAAGTCTACCCCTCACCTCCCGCCCAGCCCCCAGTGCCATACTCCCTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | TTGACTGTCTTGTCTGAGCCACGTAGAGTAGAGGTGTaGTGCCACTCAGGGGGCTGGGGCAGTACACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LTVLSEPRRVEV*CHSGGWGSTQV Trigger: CACCTGTGTACTGCCCCAGCCCCCTGAGTGGCATCACACCTCTACTCTACGTGGCTCAGACAAGACAGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| 3UTR TCA 72 bp | CCCACCACTTCGGAGGCAGAGACAGGCAGATATCTGTaGGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: PTTSEAETGRYL*VPGQLGLQSKF Trigger: GAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCCTCCGAAGTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 72 bp | TTTCGAACCACGCCTCTCCTGACCCCCACTCCATTGTaGACATGTAGCCTCTCTGGATGGGACGGTAAACCA | + |
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Preference number: 3 (lower is better) Translates to: FRTTPLLTPTPL*TCSLSGWDGKP Trigger: TGGTTTACCGTCCCATCCAGAGAGGCTACATGTCCACAATGGAGTGGGGGTCAGGAGAGGCGTGGTTCGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 72 bp | CAGAAGCAGGCATCAGGGCCCCTGGAACTGGAGTCATaGGAGATTGCTAACACGCGTGCTATAAGAGCAACT | + |
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Preference number: 3 (lower is better) Translates to: QKQASGPLELES*EIANTRAIRAT Trigger: AGTTGCTCTTATAGCACGCGTGTTAGCAATCTCCCATGACTCCAGTTCCAGGGGCCCTGATGCCTGCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | CAAACATACAGACGTGTCTGGCCTCCGCAGTTGAGATaGGCAGAGACCCCTTGTCCACAAAGACTGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: QTYRRVWPPQLR*AETPCPQRLLC Trigger: GCAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCTCATCTCAACTGCGGAGGCCAGACACGTCTGTATGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | TCTAGCAAACATACAGACGTGTCTGGCCTCCGCAGTTaGGATGAGCAGAGACCCCTTGTCCACAAAGACTGC | + |
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Preference number: 3 (lower is better) Translates to: SSKHTDVSGLRS*DEQRPLVHKDC Trigger: GCAGTCTTTGTGGACAAGGGGTCTCTGCTCATCTCAACTGCGGAGGCCAGACACGTCTGTATGTTTGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAATGAGCAGAGACCCCTaGTCCACAAAGACTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: GRDRQISVSSRPAWSSEQMSRDP*STKTAL Trigger: CAAAGCAGTCTTTGTGGACAAGGGGTCTCTGCTCAT...TTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | GTGACACTGTTTGGGAAGGTTGTAGAACTTTTAGGATaGGGAGCCTTGCTAGAGGGAGTATGGCACTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: VTLFGKVVELLG*GALLEGVWHWG Trigger: CCCCCAGTGCCATACTCCCTCTAGCAAGGCTCCTCATCCTAAAAGTTCTACAACCTTCCCAAACAGTGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTACTTTTCTGCTTCCTGAATGGGATCTATCAGTTTCGAACCACGCCTCTTCCACAAAGACTGCTTaGCTGTGGTCTCAGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: CPTFLLPEWDLSVSNHASSTKTA*LWSQLA Trigger: GGCCAGCTGAGACCACAGCAAAGCAGTCTTTGTGGA...AGAGGCGTGGTTCGAAACTGATAGATCCCATTCAGGAAGCAGAAAAGTAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR CCA 72 bp | CTGAAGACATCAAGCTGTCATGATGGAGGTGAGCACTaGGAAGCAGCTCTTCTTGGCTTTCAGATCTACTGC | + |
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Preference number: 3 (lower is better) Translates to: LKTSSCHDGGEH*EAALLGFQIYC Trigger: GCAGTAGATCTGAAAGCCAAGAAGAGCTGCTTCCCAGTGCTCACCTCCATCATGACAGCTTGATGTCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| 3UTR TCA 72 bp | CATTTGGGAGCATATTGTTGGCCAGCAGTTGGGTCCTaGTGGTTATTCTGCAAAGGTGGACGAGTTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: HLGAYCWPAVGS*WLFCKGGRVHM Trigger: CATGTGAACTCGTCCACCTTTGCAGAATAACCATCAGGACCCAACTGCTGGCCAACAATATGCTCCCAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| 3UTR GCA 72 bp | AGACTTATTTGTCTGAATCAATTTGTGTGTGCCATGTaGATGCCTGATGCCCACGGAGGTCAGAAGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLICLNQFVCAM*MPDAHGGQKQA Trigger: TGCCTGCTTCTGACCTCCGTGGGCATCAGGCATGCACATGGCACACACAAATTGATTCAGACAAATAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGTTCTAAGACAACCAACCACAGCAGCTATGTaGCTTGTCATTCCTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISVSSRPAWSSEQVLRQPTTAAM*LVIPCP Trigger: AGGGCAAGGAATGACAAGCAACATAGCTGCTGTGGT...TGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR GCA 72 bp | GGCACAGACCTGCCTCCCCTAAGGCTTTCCTCCAGATaGCCAACTCTTTCTGAATATTATGTTATTATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GTDLPPLRLSSR*PTLSEYYVIMP Trigger: TGGCATAATAACATAATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCCTTAGGGGAGGCAGGTCTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CCA 72 bp | AGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTaGTCTTCAGAGCAAGTTCTAAGACAACCAAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: RDRQISVSSRPA*SSEQVLRQPRL Trigger: TAGTCTTGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CCA 72 bp | CCTGATGGTTATTCTGCAAAGGTGGACGAGTTCACATaGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PDGYSAKVDEFT*ILVSCWRDVVQ Trigger: TTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCGTCCACCTTTGCAGAATAACCATCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| 3UTR CCA 72 bp | TCATTGAGCACTTGGTCCCTAGTTGGTGACACTGTTTaGGAAGGTTGTAGAACTTTTAGGATGAGGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSTWSLVGDTV*EGCRTFRMRSL Trigger: AAGGCTCCTCATCCTAAAAGTTCTACAACCTTCCCAAACAGTGTCACCAACTAGGGACCAAGTGCTCAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR-3UTR CAA 90 bp | GTCATGATGGAGGTGAGCACTGGGAAGCAGCTCTTCTTGGCTTTCAGATCTACTGGAAGTGCAACAAACTaGTGTGAAGTTAACAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VMMEVSTGKQLFLAFRSTGSATN*CEVNSL Trigger: TAAACTGTTAACTTCACACAAGTTTGTTGCACTTCC...AGTAGATCTGAAAGCCAAGAAGAGCTGCTTCCCAGTGCTCACCTCCATCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR GCA 72 bp | ACGTTCTCTTATGCTGTTTTGAGTGCAGCAGTAACATaGTACAAAGCAAGCCAGCTGAAGACATCAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TFSYAVLSAAVT*YKASQLKTSSC Trigger: ACAGCTTGATGTCTTCAGCTGGCTTGCTTTGTAGCATGTTACTGCTGCACTCAAAACAGCATAAGAGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR GCA 72 bp | TTAAGAATCTACACCTTGCTCCATGTCCTACTTTTCTaGTTCCTGAATGGGATCTATCAGTTTCGAACCACG | + |
|
Preference number: 3 (lower is better) Translates to: LRIYTLLHVLLF*FLNGIYQFRTT Trigger: CGTGGTTCGAAACTGATAGATCCCATTCAGGAAGCAGAAAAGTAGGACATGGAGCAAGGTGTAGATTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CCA 72 bp | AAGGTGGACGAGTTCACATGGATCCTTGTATCTTGTTaGCGGGATGTAGTCCAACCAATTTTGAATAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVDEFTWILVSC*RDVVQPILNNW Trigger: CCAATTATTCAAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCGTCCACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| 3UTR TCA 72 bp | TCCCCTAAGGCTTTCCTCCAGATGCCCAACTCTTTCTaGATATTATGTTATTATGCCAAAACAGATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPKAFLQMPNSF*ILCYYAKTDLL Trigger: AAGGAGATCTGTTTTGGCATAATAACATAATATTCAGAAAGAGTTGGGCATCTGGAGGAAAGCCTTAGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR TCA 72 bp | CACAATGTCTTAGCAAGCCTCCTGTGGTGTTTTGAATaGGAAAGATCATTAGGCATATTCATTGAGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: HNVLASLLWCFE*ERSLGIFIEHL Trigger: CAAGTGCTCAATGAATATGCCTAATGATCTTTCTCATTCAAAACACCACAGGAGGCTTGCTAAGACATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR GCA 72 bp | CAAAACAGATCTCCTTTATCTAATGCATGTAATTACTaGATGGATGCTAATGGGGTAAAGTTGCATGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QNRSPLSNACNY*MDANGVKLHGN Trigger: GTTACCATGCAACTTTACCCCATTAGCATCCATGCAGTAATTACATGCATTAGATAAAGGAGATCTGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR TCA 72 bp | TATATCTTCTTTAAAGCAGTTTTAGACTTATTTGTCTaGATCAATTTGTGTGTGCCATGTGCATGCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: YIFFKAVLDLFV*INLCVPCACLM Trigger: CATCAGGCATGCACATGGCACACACAAATTGATTCAGACAAATAAGTCTAAAACTGCTTTAAAGAAGATATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGTGATGCCACTCAGGGGGCTGGGGCAGTACACAGGTGTGAAGGTTCTCCATTGGCCCAGAAACTaGAGAGAGGGCCGCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGVMPLRGLGQYTGVKVLHWPRN*REGRLT Trigger: AGTTAAGCGGCCCTCTCTGCAGTTTCTGGGCCAATG...GAGAACCTTCACACCTGTGTACTGCCCCAGCCCCCTGAGTGGCATCACACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| 3UTR CAA 72 bp | CAGTTTCGAACCACGCCTCTCCTGACCCCCACTCCATaGTGGACATGTAGCCTCTCTGGATGGGACGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QFRTTPLLTPTP*WTCSLSGWDGK Trigger: TTTACCGTCCCATCCAGAGAGGCTACATGTCCACAATGGAGTGGGGGTCAGGAGAGGCGTGGTTCGAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGTGATGCCACTCAGGGGGCTGGGGCAGTACACAGGTGTGAAGGTTCTCGAATATATTGCTTCTTaGAAAAGACGTCTTCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVMPLRGLGQYTGVKVLEYIAS*KRRLPA Trigger: TGCCGGAAGACGTCTTTTCCAAGAAGCAATATATTC...GAGAACCTTCACACCTGTGTACTGCCCCAGCCCCCTGAGTGGCATCACACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGTCTTGGCATCTTCTTaGATGTCAATCAACTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDRQISVSSRPAWSSEQVLASS*MSINSW Trigger: CCACGAGTTGATTGACATTCAAGAAGATGCCAAGAC...TTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | GGCCAGCAGTTGGGTCCTGATGGTTATTCTGCAAAGGTGGACGAGTTCACATGGGGGTTCTGTAAATCCTaGGTTCATAGCAGTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GQQLGPDGYSAKVDEFTWGFCKS*VHSSGI Trigger: GATACCACTGCTATGAACCCAGGATTTACAGAACCC...CCATGTGAACTCGTCCACCTTTGCAGAATAACCATCAGGACCCAACTGCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCATGCCTGATGCCCACGGAGGTCAGAAGCAGGCATCAGGGCCCCTGGAAGCATTAAACATGTCTTaGCATCTTCTTGAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MCMPDAHGGQKQASGPLEALNMS*HLLECQ Trigger: TTGACATTCAAGAAGATGCCAAGACATGTTTAATGC...TTCCAGGGGCCCTGATGCCTGCTTCTGACCTCCGTGGGCATCAGGCATGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | CAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTaGGTCTTCAGAGCAAGTTCTAAGACAACCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QRQADICEFQAS*VFRASSKTTKT Trigger: AGTCTTGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | GATGGGACGGTAAACCAAAATACACCTTTCCATAAGTaGCTTTGGTCATGGCGTCTCACCCCACTAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DGTVNQNTPFHK*LWSWRLTPLTD Trigger: GTCTGTTAGTGGGGTGAGACGCCATGACCAAAGCAACTTATGGAAAGGTGTATTTTGGTTTACCGTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGACAGGCAGATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGGTTACAGAATATATTaGTTCTTGGAAAAGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDRQISVSSRPAWSSEQGYRIY*FLEKTS Trigger: AGACGTCTTTTCCAAGAAGCAATATATTCTGTAACC...TTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATATCTGCCTGTCTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | AAGTTAAAAGCAGACTTACTAAGCTGGGGAGAGGGAATGGTGGTGTATACGTTTATATCAGCGCCAGGCTaGAGCTTCTGTCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KLKADLLSWGEGMVVYTFISAPG*SFCLGH Trigger: ATGTCCAAGACAGAAGCTGCAGCCTGGCGCTGATAT...AAACGTATACACCACCATTCCCTCTCCCCAGCTTAGTAAGTCTGCTTTTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | GTCATGATGGAGGTGAGCACTGGGAAGCAGCTCTTCTaGGCTTTCAGATCTACTGCTGTCTTTGCTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMMEVSTGKQLF*AFRSTAVFAIF Trigger: AAAAATAGCAAAGACAGCAGTAGATCTGAAAGCCAAGAAGAGCTGCTTCCCAGTGCTCACCTCCATCATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | AAATATTCCATTTGGGAGCATATTGTTGGCCAGCAGTaGGGTCCTGATGGTTATTCTGCAAAGGTGGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYSIWEHIVGQQ*GPDGYSAKVDE Trigger: CTCGTCCACCTTTGCAGAATAACCATCAGGACCCAACTGCTGGCCAACAATATGCTCCCAAATGGAATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGCAGCTATGTTGCTTGTCATTCCTTGCCCTACAGAATAAATCCTCAGTAGGGTTCTGTAAATCCTaGGTTCATAGCAGTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PQQLCCLSFLALQNKSSVGFCKS*VHSSGI Trigger: GATACCACTGCTATGAACCCAGGATTTACAGAACCC...TACTGAGGATTTATTCTGTAGGGCAAGGAATGACAAGCAACATAGCTGCTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCATTTCACCACAGCAGCTATGTTGCTTGTCATTCCTTGCCCTACAGAACAGGATTACCTTTCCTaGCGAAAACCCAGTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLHFTTAAMLLVIPCPTEQDYLS*RKPSTE Trigger: TTCTGTACTGGGTTTTCGCCAGGAAAGGTAATCCTG...TTCTGTAGGGCAAGGAATGACAAGCAACATAGCTGCTGTGGTGAAATGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | ATCCTAAGGGACAGTGTAGAGATGCATGCTAGCTTTCTAAATTCAGGAAGTTTTATATCAGCGCCAGGCTaGAGCTTCTGTCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRDSVEMHASFLNSGSFISAPG*SFCLGH Trigger: ATGTCCAAGACAGAAGCTGCAGCCTGGCGCTGATAT...AAAACTTCCTGAATTTAGAAAGCTAGCATGCATCTCTACACTGTCCCTTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTTTATTAACTTCTAAATTGTACCATGCTACCATCCTAAGGGACAGTGTACATTGGCCCAGAAACTaGAGAGAGGGCCGCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLTSKLYHATILRDSVHWPRN*REGRLT Trigger: AGTTAAGCGGCCCTCTCTGCAGTTTCTGGGCCAATG...TACACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGCAGCAGTAACATGCTACAAAGCAAGCCAGCTGAAGACATCAAGCTGTAAACCCAGTACAGAATaGTATTCACGCATATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAAVTCYKASQLKTSSCKPSTE*YSRIFQ Trigger: CTGAAATATGCGTGAATACCATTCTGTACTGGGTTT...ACAGCTTGATGTCTTCAGCTGGCTTGCTTTGTAGCATGTTACTGCTGCACTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | ATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCTTAGTGGACGAGTTCACATaGATCCTTGTATCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDKHPTIQPFTVTAHNVLVDEFT*ILVSCW Trigger: CCAACAAGATACAAGGATCCATGTGAACTCGTCCAC...TAAGACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | ATTCCATTTGGGAGCATATTGTTGGCCAGCAGTTGGGTCCTGATGGTTATTCTGGGTTACAGAATATATTaGTTCTTGGAAAAGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPFGSILLASSWVLMVILGYRIY*FLEKTS Trigger: AGACGTCTTTTCCAAGAAGCAATATATTCTGTAACC...CAGAATAACCATCAGGACCCAACTGCTGGCCAACAATATGCTCCCAAATGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTAAAAGCAGACTTACTAAGCTGGGGAGAGGGAATGGTGGTGTATACGTTTGAATATATTGCTTCTTaGAAAAGACGTCTTCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKADLLSWGEGMVVYTFEYIAS*KRRLPA Trigger: TGCCGGAAGACGTCTTTTCCAAGAAGCAATATATTC...AAACGTATACACCACCATTCCCTCTCCCCAGCTTAGTAAGTCTGCTTTTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | ATCCTAAGGGACAGTGTAGAGATGCATGCTAGCTTTCTAAATTCAGGAAGTTTTCAGGATTACCTTTCCTaGCGAAAACCCAGTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILRDSVEMHASFLNSGSFQDYLS*RKPSTE Trigger: TTCTGTACTGGGTTTTCGCCAGGAAAGGTAATCCTG...AAAACTTCCTGAATTTAGAAAGCTAGCATGCATCTCTACACTGTCCCTTAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTTCTAAGACAACCAAGACTACACAGAGAAACCTTATCTCAAGGAAAAGTTATTCTGCAAAGGTaGACGAGTTCACATGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: EQVLRQPRLHRETLSQGKVILQR*TSSHGS Trigger: GGATCCATGTGAACTCGTCCACCTTTGCAGAATAAC...TTTTCCTTGAGATAAGGTTTCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTTCTAAGACAACCAAGACTACACAGAGAAACCTTATCTCAAGGAAAAGGAAAATATTCCATTTaGGAGCATATTGTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQVLRQPRLHRETLSQGKGKYSI*EHIVGQ Trigger: CTGGCCAACAATATGCTCCCAAATGGAATATTTTCC...TTTTCCTTGAGATAAGGTTTCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | GCATGTAATTACTGCATGGATGCTAATGGGGTAAAGTaGCATGGTAACTATAGTGCTGTACTTAAGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: ACNYCMDANGVK*HGNYSAVLKTY Trigger: ATATGTCTTAAGTACAGCACTATAGTTACCATGCAACTTTACCCCATTAGCATCCATGCAGTAATTACATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR GCA 90 bp | AACAGTTTATTAACTTCTAAATTGTACCATGCTACCATCCTAAGGGACAGTGTAATACCTCAGGATTTTTaGCAGGGTTCTGTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLTSKLYHATILRDSVIPQDF*QGSVNP Trigger: AGGATTTACAGAACCCTGGCAAAAATCCTGAGGTAT...TACACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
||
| 3UTR CAA 72 bp | AACTTGTGTGAAGTTAACAGTTTATTAACTTCTAAATaGTACCATGCTACCATCCTAAGGGACAGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLCEVNSLLTSK*YHATILRDSVE Trigger: CTCTACACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTTAACTTCACACAAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| 3UTR CAA 72 bp | TTATTATTTCTTAAAATTACGTTCTCTTATGCTGTTTaGAGTGCAGCAGTAACATGCTACAAAGCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFLKITFSYAV*SAAVTCYKASQ Trigger: CTGGCTTGCTTTGTAGCATGTTACTGCTGCACTCAAAACAGCATAAGAGAACGTAATTTTAAGAAATAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CAA 90 bp | ATGTGCATGCCTGATGCCCACGGAGGTCAGAAGCAGGCATCAGGGCCCCTGGAACCATTTGGGAGCATATaGTTGGCCAGCAGTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MCMPDAHGGQKQASGPLEPFGSI*LASSWV Trigger: GACCCAACTGCTGGCCAACAATATGCTCCCAAATGG...TTCCAGGGGCCCTGATGCCTGCTTCTGACCTCCGTGGGCATCAGGCATGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAGGCATCAGGGCCCCTGGAACTGGAGTCATGGGAGATTGCTAACACGCGCTGCAGCTTCTGTCTaGGACATAGTCCTTCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRHQGPWNWSHGRLLTRAAASV*DIVLRL Trigger: AAGACGAAGGACTATGTCCAAGACAGAAGCTGCAGC...GCGTGTTAGCAATCTCCCATGACTCCAGTTCCAGGGGCCCTGATGCCTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAATGGGATCTATCAGTTTCGAACCACGCCTCTCCTGACCCCCACTCCATTTTTGGGAGCATATTGTaGGCCAGCAGTTGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEWDLSVSNHASPDPHSIFGSIL*ASSWVL Trigger: CAGGACCCAACTGCTGGCCAACAATATGCTCCCAAA...AATGGAGTGGGGGTCAGGAGAGGCGTGGTTCGAAACTGATAGATCCCATTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
||
| CDS GCA 90 bp | GAGGAGTATGTCAAAGCCGTCCAAGTCAACATACCTCAGGATTTTTaGCAGGGTTCTGTAAATCCTGGGTTCATAGCAGTGGTATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EEYVKAVQVNIPQDF*QGSVNPGFIAVVSP Trigger: TGGGGATACCACTGCTATGAACCCAGGATTTACAGAACCCTGGCAAAAATCCTGAGGTATGTTGACTTGGACGGCTTTGACATACTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
||
| CDS-3UTR CAA 90 bp | CGAGTTCACATGGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAACCAATTTTGCTGCAGCTTCTGTCTaGGACATAGTCCTTCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVHMDPCILLAGCSPTNFAAASV*DIVLRL Trigger: AAGACGAAGGACTATGTCCAAGACAGAAGCTGCAGC...AAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGATGGAGGTGAGCACTGGGAAGCAGCTCTTCTTGGCTTTCAGATCTACTAGGTTACAGAATATATaGCTTCTTGGAAAAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: VMMEVSTGKQLFLAFRSTRLQNI*LLGKDV Trigger: GACGTCTTTTCCAAGAAGCAATATATTCTGTAACCT...AGTAGATCTGAAAGCCAAGAAGAGCTGCTTCCCAGTGCTCACCTCCATCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS-3UTR CAA 90 bp | AAGGTGGACGAGTTCACATGGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAAAACTCAAGGTTAAAGTaGAGTTCAAAACGGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: KVDEFTWILVSCWRDVVQNSRLK*SSKRCP Trigger: AGGACACCGTTTTGAACTCAACTTTAACCTTGAGTT...TTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCGTCCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| CDS-3UTR CAA 90 bp | GTTAACAGTTTATTAACTTCTAAATTGTACCATGCTACCATCCTAAGGGACAGTGCAGTGGTATCCCCATaGGCCCAGAAACTGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VNSLLTSKLYHATILRDSAVVSP*AQKLQR Trigger: TCTCTGCAGTTTCTGGGCCAATGGGGATACCACTGC...ACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCCAGGCCAGCTTGGTCTTCAGAGCAAGTTCTAAGACAACCAAACTCAAGGTTAAAGTaGAGTTCAAAACGGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ISVSSRPAWSSEQVLRQPNSRLK*SSKRCP Trigger: AGGACACCGTTTTGAACTCAACTTTAACCTTGAGTT...TGGTTGTCTTAGAACTTGCTCTGAAGACCAAGCTGGCCTGGAACTCACAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS-3UTR CAA 90 bp | ACTCGTGGTCAACCATTATTCTCACTCTCGAAGGGTAAAGTAGTATTGTCAGAACATACCTCAGGATTTTaGCCAGGGTTCTGTAAATCC | + |
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Preference number: 5 (lower is better) Translates to: TRGQPLFSLSKGKVVLSEHTSGF*PGFCKS Trigger: GGATTTACAGAACCCTGGCAAAAATCCTGAGGTATG...TTCTGACAATACTACTTTACCCTTCGAGAGTGAGAATAATGGTTGACCACGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAGAGCAAGTTCTAAGACAACCAAGACTACACAGAGAAACCTTATCTCAAAGTTCACATGGATCCTaGTATCTTGTTGGCGGGATG | + |
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Preference number: 5 (lower is better) Translates to: SSEQVLRQPRLHRETLSQSSHGS*YLVGGM Trigger: CATCCCGCCAACAAGATACAAGGATCCATGTGAACT...TTGAGATAAGGTTTCTCTGTGTAGTCTTGGTTGTCTTAGAACTTGCTCTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS-3UTR CAA 90 bp | ATAGATAAACATCCCACAATCCAGCCTTTCACTGTAACTGCCCACAATGTCTTAAGAATATATTGCTTCTaGGAAAAGACGTCTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: IDKHPTIQPFTVTAHNVLRIYCF*EKTSSG Trigger: GCCGGAAGACGTCTTTTCCAAGAAGCAATATATTCT...TAAGACATTGTGGGCAGTTACAGTGAAAGGCTGGATTGTGGGATGTTTATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS-3UTR CAA 90 bp | CGAGTTCACATGGATCCTTGTATCTTGTTGGCGGGATGTAGTCCAACCAATTTTAGGTTACAGAATATATaGCTTCTTGGAAAAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: RVHMDPCILLAGCSPTNFRLQNI*LLGKDV Trigger: GACGTCTTTTCCAAGAAGCAATATATTCTGTAACCT...AAAATTGGTTGGACTACATCCCGCCAACAAGATACAAGGATCCATGTGAACTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| CDS-3UTR CAA 90 bp | GGTCAACCATTATTCTCACTCTCGAAGGGTAAAGTAGTATTGTCAGAACAATGTAGAATATATTGCTTCTaGGAAAAGACGTCTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: GQPLFSLSKGKVVLSEQCRIYCF*EKTSSG Trigger: GCCGGAAGACGTCTTTTCCAAGAAGCAATATATTCT...ACATTGTTCTGACAATACTACTTTACCCTTCGAGAGTGAGAATAATGGTTGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| CDS-3UTR CAA 90 bp | AACAGTTTATTAACTTCTAAATTGTACCATGCTACCATCCTAAGGGACAGTGTACATACCTCAGGATTTTaGCCAGGGTTCTGTAAATCC | + |
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Preference number: 5 (lower is better) Translates to: NSLLTSKLYHATILRDSVHTSGF*PGFCKS Trigger: GGATTTACAGAACCCTGGCAAAAATCCTGAGGTATG...TACACTGTCCCTTAGGATGGTAGCATGGTACAATTTAGAAGTTAATAAACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS CAA 90 bp | TGCCAGGGTTCTGTAAATCCTGGGTTCATAGCAGTGGTATCCCCATaGGCCCAGAAACTGCAGAGAGGGCCGCTTAACTATCTTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: CQGSVNPGFIAVVSP*AQKLQRGPLNYLVN Trigger: GTTGACAAGATAGTTAAGCGGCCCTCTCTGCAGTTTCTGGGCCAATGGGGATACCACTGCTATGAACCCAGGATTTACAGAACCCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS CAA 90 bp | AGGTGTGAAGGTTCTCCATATCAGCGCCAGGCTGCAGCTTCTGTCTaGGACATAGTCCTTCGTCTTCTTGAGAAGCAGTTCCACGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RCEGSPYQRQAAASV*DIVLRLLEKQFHEV Trigger: GACTTCGTGGAACTGCTTCTCAAGAAGACGAAGGACTATGTCCAAGACAGAAGCTGCAGCCTGGCGCTGATATGGAGAACCTTCACACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS CAA 72 bp | GGTTCTCCATATCAGCGCCAGGCTGCAGCTTCTGTCTaGGACATAGTCCTTCGTCTTCTTGAGAAGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSPYQRQAAASV*DIVLRLLEKQF Trigger: GAACTGCTTCTCAAGAAGACGAAGGACTATGTCCAAGACAGAAGCTGCAGCCTGGCGCTGATATGGAGAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044089.4 |
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| CDS CAA 72 bp | TCTGTAAATCCTGGGTTCATAGCAGTGGTATCCCCATaGGCCCAGAAACTGCAGAGAGGGCCGCTTAACTAT | + |
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Preference number: 6 (lower is better) Translates to: SVNPGFIAVVSP*AQKLQRGPLNY Trigger: ATAGTTAAGCGGCCCTCTCTGCAGTTTCTGGGCCAATGGGGATACCACTGCTATGAACCCAGGATTTACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS CAA 72 bp | TTACCTCCATATCAGCGCCAGGCTGCAGCTTCTGTCTaGGACATAGTCCTTCGTCTTCTTGAGAAGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LPPYQRQAAASV*DIVLRLLEKQF Trigger: GAACTGCTTCTCAAGAAGACGAAGGACTATGTCCAAGACAGAAGCTGCAGCCTGGCGCTGATATGGAGGTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198849.2 |
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| CDS GCA 72 bp | GTCAAAGCCGTCCAAGTCAACATACCTCAGGATTTTTaGCAGGGTTCTGTAAATCCTGGGTTCATAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VKAVQVNIPQDF*QGSVNPGFIAV Trigger: CACTGCTATGAACCCAGGATTTACAGAACCCTGGCAAAAATCCTGAGGTATGTTGACTTGGACGGCTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS TCA 72 bp | GGTGTCCTGACTTTTCCACAAAAGCAATATAGTCCGTaGGGAGTATGTCAAAGCCGTCCAAGTCAACATACC | + |
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Preference number: 6 (lower is better) Translates to: GVLTFPQKQYSP*GVCQSRPSQHT Trigger: GGTATGTTGACTTGGACGGCTTTGACATACTCCTCACGGACTATATTGCTTTTGTGGAAAAGTCAGGACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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| CDS CAA 72 bp | TGGCCCAGAAACTGCAGAGAGGGCCGCTTAACTATCTaGTCAACAAGGTTACAGAATATATTGCTTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: WPRNCREGRLTI*STRLQNILLLG Trigger: TCCAAGAAGCAATATATTCTGTAACCTTGTTGACAAGATAGTTAAGCGGCCCTCTCTGCAGTTTCTGGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044089.4 ENSMUST00000198849.2 |
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