Pregenerated sensors for ASB16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034768Ensembl transcript IDs: ENSMUST00000036467.5
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGATCAGTTGCTTGTCGCTTGGGTGGCTACAGAGGCCATCTATTaGTGGCAGGTGGGTGAAAGGTTTCTTTGGGGACAGGCTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: WDQLLVAWVATEAIY*WQVGERFLWGQAEK Trigger: CTTCTCAGCCTGTCCCCAAAGAAACCTTTCACCCACCTGCCATCAATAGATGGCCTCTGTAGCCACCCAAGCGACAAGCAACTGATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 90 bp | TATGTAGCCCAGGCTGGTTTTGAACTCCGGCTTCCACCTCCCAAATaGTGTCACTCACTGTGGAAGGTTGGCTTCGCTGTTTTCCGGTTC | + |
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Preference number: 1 (lower is better) Translates to: YVAQAGFELRLPPPK*CHSLWKVGFAVFRF Trigger: GAACCGGAAAACAGCGAAGCCAACCTTCCACAGTGAGTGACATCATTTGGGAGGTGGAAGCCGGAGTTCAAAACCAGCCTGGGCTACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR GCA 90 bp | GATCACCAACAGAGTGTCGTCCAGGCCAAAAAGTGGGGAAGACTGTaGCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAGTGGTAACC | + |
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Preference number: 1 (lower is better) Translates to: DHQQSVVQAKKWGRL*QAVSKKGSVLEVVT Trigger: GGTTACCACTTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTGGACGACACTCTGTTGGTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CAA 90 bp | GAAGGGTTCAGTTCTGGAAGTGGTAACCAGTTTACTGAGCCCACGTaGCTGGGCCTGTATACGGAGGAGGTCGGAGGACAGACCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: EGFSSGSGNQFTEPT*LGLYTEEVGGQTQQ Trigger: CTGTTGGGTCTGTCCTCCGACCTCCTCCGTATACAGGCCCAGCAACGTGGGCTCAGTAAACTGGTTACCACTTCCAGAACTGAACCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGGCCTGTATACGGAGGAGGTCGGAGGACAGACCCAACAGAATCTTGCCTCAGGCATATAGGCGGTaGGGAGAAACTGCATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CWACIRRRSEDRPNRILPQAYRR*GETAWD Trigger: ATCCCATGCAGTTTCTCCTCACCGCCTATATGCCTG...AGGCAAGATTCTGTTGGGTCTGTCCTCCGACCTCCTCCGTATACAGGCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCGTTCCGGATCCAGCCTAGGCCTCACACACACCGGGCAGGGGCTCAACATTCTGAAGATCAGCAGGTaGCTTAAGATGTCAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FRSGSSLGLTHTGQGLNILKISR*LKMSVE Trigger: CTCCACTGACATCTTAAGCCACCTGCTGATCTTCAG...AATGTTGAGCCCCTGCCCGGTGTGTGTGAGGCCTAGGCTGGATCCGGAACGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGCAGGCTGAGAAGGCCTaGAGATCAGCAGGTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLQAEKA*RSAGGL Trigger: TAAGCCACCTGCTGATCTTCAGGCCTTCTCAGCCTG...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGCCTGTATACGGAGGAGGTCGGAGGACAGACCCAACAGAATCTTGCCTGACACTTGTTCAGCGTaGTATGTCAAGCCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CWACIRRRSEDRPNRILPDTCSA*YVKPGV Trigger: AACCCCAGGCTTGACATACCACGCTGAACAAGTGTC...AGGCAAGATTCTGTTGGGTCTGTCCTCCGACCTCCTCCGTATACAGGCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCAAAAAGTGGGGAAGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTACAGAGGCCATCTATTaGTGGCAGGTGGGTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QAKKWGRLCQAVSKKGSVTEAIY*WQVGER Trigger: CCTTTCACCCACCTGCCATCAATAGATGGCCTCTGT...AACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR GCA 90 bp | GGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGTACTCCTGGAGGACATaGAAAGTGCAGAGAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GHLFSVVCQAWGSIPSAEYSWRT*KVQRKL Trigger: CAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTA...CTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGATCTTTGGGGACAGGCTaGGAAGGCCTGAAGATCAGC | + |
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Preference number: 2 (lower is better) Translates to: RAKRSCHNCGFNREEDGGSLGTG*EGLKIS Trigger: GCTGATCTTCAGGCCTTCTCAGCCTGTCCCCAAAGA...TCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGACTACAGCCTCAAGCTCAGGATCACCAACAGAGTGTCGTCCAGGCCAAAGTGGGGAAGACTGTaGCAAGCAGTTTCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FKDYSLKLRITNRVSSRPKWGRL*QAVSKK Trigger: CTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTT...TGGCCTGGACGACACTCTGTTGGTGATCCTGAGCTTGAGGCTGTAGTCTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGACTACAGCCTCAAGCTCAGGATCACCAACAGAGTGTCGTCCAGGCCACCAGCCTCCAGGACATaGGTTTCATTAAGAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: FKDYSLKLRITNRVSSRPPASRT*VSLRAR Trigger: TCTAGCTCTTAATGAAACCCATGTCCTGGAGGCTGG...TGGCCTGGACGACACTCTGTTGGTGATCCTGAGCTTGAGGCTGTAGTCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACACATTATAAAAGCCTCTTCAAAGACTACAGCCTCAAGCTCAGGATCAAAGGGCCTGTCCCTATaGAACCGGCAGAGCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GKHIIKASSKTTASSSGSKGLSL*NRQSRH Trigger: ATGCCTGCTCTGCCGGTTTCATAGGGACAGGCCCTT...TGATCCTGAGCTTGAGGCTGTAGTCTTTGAAGAGGCTTTTATAATGTGTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAAACACATTATAAAAGCCTCTTCAAAGACTACAGCCTCAAGCTCAGGATCAGGAGGACATGCAAAGTaGAGAGAAAGCTGGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: GKHIIKASSKTTASSSGSGGHAK*RESWAA Trigger: CGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCC...TGATCCTGAGCTTGAGGCTGTAGTCTTTGAAGAGGCTTTTATAATGTGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCAAAAAGTGGGGAAGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTAAAACTACCATTCTTTaGAGTTCTACCCAGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QAKKWGRLCQAVSKKGSVKTTIL*SSTQCL Trigger: CAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTT...AACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAGTGGTAACCAGTGACCCAACAGAATCTTaGCTACATCTTGTTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RLCQAVSKKGSVLEVVTSDPTES*LHLVEV Trigger: AACCTCAACAAGATGTAGGCAAGATTCTGTTGGGTC...ACTGGTTACCACTTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTGCTGAGAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGGTGAAAGGTTTCTTTaGGGACAGGCTGAGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSAEKKTKQNYHSLKFYPGERFL*GQAEKA Trigger: GGCCTTCTCAGCCTGTCCCCAAAGAAACCTTTCACC...TGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTCTCAGCACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTGGATATTGATGGCAGGTGGGTaGAAGGTTTCTTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: EENQAKLPFFEVLPSVWILMAGG*KVSLGT Trigger: TGTCCCCAAAGAAACCTTTCACCCACCTGCCATCAA...TATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR GCA 72 bp | GATGTCAGTGGAGGGACAAGCTACTCCTGGAGGACATaGAAAGTGCAGAGAAAGCTGGGCAGCGGGGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: DVSGGTSYSWRT*KVQRKLGSGAA Trigger: CGCTGCCCCGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTAGCTTGTCCCTCCACTGACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | TCTGAGCCATCAAGTCCAACTAAGGGCCTGTCCCTATaGAACCGGCAGAGCAGGCATATAGGCGGTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SEPSSPTKGLSL*NRQSRHIGGEE Trigger: CTCCTCACCGCCTATATGCCTGCTCTGCCGGTTTCATAGGGACAGGCCCTTAGTTGGACTTGATGGCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | GTCCCTATGAAACCGGCAGAGCAGGCATATAGGCGGTaGGGAGAAACTGCATGGGATCAGTTGCTTGTCGCT | + |
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Preference number: 3 (lower is better) Translates to: VPMKPAEQAYRR*GETAWDQLLVA Trigger: AGCGACAAGCAACTGATCCCATGCAGTTTCTCCTCACCGCCTATATGCCTGCTCTGCCGGTTTCATAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CCA 72 bp | CTTGGGTGGCTACAGAGGCCATCTATTGATGGCAGGTaGGTGAAAGGTTTCTTTGGGGACAGGCTGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LGWLQRPSIDGR*VKGFFGDRLRR Trigger: CCTTCTCAGCCTGTCCCCAAAGAAACCTTTCACCCACCTGCCATCAATAGATGGCCTCTGTAGCCACCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | GGTGAAAGGTTTCTTTGGGGACAGGCTGAGAAGGCCTaGAGATCAGCAGGTGGCTTAAGATGTCAGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GERFLWGQAEKA*RSAGGLRCQWR Trigger: CCTCCACTGACATCTTAAGCCACCTGCTGATCTTCAGGCCTTCTCAGCCTGTCCCCAAAGAAACCTTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | TTGCTTGTCGCTTGGGTGGCTACAGAGGCCATCTATTaGTGGCAGGTGGGTGAAAGGTTTCTTTGGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LLVAWVATEAIY*WQVGERFLWGQ Trigger: CTGTCCCCAAAGAAACCTTTCACCCACCTGCCATCAATAGATGGCCTCTGTAGCCACCCAAGCGACAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | CAGGCTGGTTTTGAACTCCGGCTTCCACCTCCCAAATaGTGTCACTCACTGTGGAAGGTTGGCTTCGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QAGFELRLPPPK*CHSLWKVGFAV Trigger: AACAGCGAAGCCAACCTTCCACAGTGAGTGACATCATTTGGGAGGTGGAAGCCGGAGTTCAAAACCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CCA 72 bp | CAGGATCACCAACAGAGTGTCGTCCAGGCCAAAAAGTaGGGAAGACTGTGCCAAGCAGTTTCCAAGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: QDHQQSVVQAKK*GRLCQAVSKKG Trigger: ACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTGGACGACACTCTGTTGGTGATCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR GCA 72 bp | CATATAGGCGGTGAGGAGAAACTGCATGGGATCAGTTaGTTGTCGCTTGGGTGGCTACAGAGGCCATCTATT | + |
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Preference number: 3 (lower is better) Translates to: HIGGEEKLHGIS*LSLGWLQRPSI Trigger: AATAGATGGCCTCTGTAGCCACCCAAGCGACAAGCAACTGATCCCATGCAGTTTCTCCTCACCGCCTATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR GCA 72 bp | CAGAGTGTCGTCCAGGCCAAAAAGTGGGGAAGACTGTaGCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: QSVVQAKKWGRL*QAVSKKGSVLE Trigger: TTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTGGACGACACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CCA 72 bp | GCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTaGATAGAACACACAGGCCAGGAGGCAGGGTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: AKLPFFEVLPSV*IEHTGQEAGSP Trigger: AGGGGACCCTGCCTCCTGGCCTGTGTGTTCTATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | TTTCTAGCTTTCTGGGCCCCCGAAGCCACTCTAGAGTaGCTGCCAATTAAGATTCCATGTGACATTTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: FLAFWAPEATLE*LPIKIPCDIWA Trigger: TGCCCAAATGTCACATGGAATCTTAATTGGCAGTCACTCTAGAGTGGCTTCGGGGGCCCAGAAAGCTAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR GCA 72 bp | TACGGAGGAGGTCGGAGGACAGACCCAACAGAATCTTaGCTACATCTTGTTGAGGTTTTTCTTCTCGTTTCG | + |
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Preference number: 3 (lower is better) Translates to: YGGGRRTDPTES*LHLVEVFLLVS Trigger: CGAAACGAGAAGAAAAACCTCAACAAGATGTAGGCAAGATTCTGTTGGGTCTGTCCTCCGACCTCCTCCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CCA 72 bp | GTAACTGGACACTTGTTCAGCGTGGTATGTCAAGCCTaGGGTTCCATACCTAGTGCTGAGAAGAAAACCAAG | + |
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Preference number: 3 (lower is better) Translates to: VTGHLFSVVCQA*GSIPSAEKKTK Trigger: CTTGGTTTTCTTCTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CAA 90 bp | GGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGCAAAACTACCATTCTTaGAAGTTCTACCCAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: GHLFSVVCQAWGSIPSAEQNYHS*KFYPVS Trigger: AGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTG...CTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CAA 90 bp | CTTCAAAGACTACAGCCTCAAGCTCAGGATCACCAACAGAGTGTCGTCCAGGCCAATCTTGCCTACATCTaGTTGAGGTTTTTCTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: LQRLQPQAQDHQQSVVQANLAYI*LRFFFS Trigger: CGAGAAGAAAAACCTCAACAAGATGTAGGCAAGATT...GGCCTGGACGACACTCTGTTGGTGATCCTGAGCTTGAGGCTGTAGTCTTTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CAA 90 bp | TTACTTTTGTCTCTGGGTCCAAAAGTAAGAGAGGACAGCTTTCTAGCTTTCTGGTTTACTGAGCCCACGTaGCTGGGCCTGTATACGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLLSLGPKVREDSFLAFWFTEPT*LGLYTE Trigger: CTCCGTATACAGGCCCAGCAACGTGGGCTCAGTAAA...CCAGAAAGCTAGAAAGCTGTCCTCTCTTACTTTTGGACCCAGAGACAAAAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR TCA 72 bp | GTGCTGAGAAGAAAACCAAGCAAAACTACCATTCTTTaGAGTTCTACCCAGTGTCTGGATAGAACACACAGG | + |
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Preference number: 3 (lower is better) Translates to: VLRRKPSKTTIL*SSTQCLDRTHR Trigger: CCTGTGTGTTCTATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTCTCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR-3UTR CAA 90 bp | TGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGAAGAAAACCAAGCAAAAAAATCTTGCTAGCTTaGAACCTACAATTCTACTGC | + |
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Preference number: 3 (lower is better) Translates to: WYVKPGVPYLVLRRKPSKKILLA*NLQFYC Trigger: GCAGTAGAATTGTAGGTTCAAAGCTAGCAAGATTTT...TTTGCTTGGTTTTCTTCTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTACTCCTGGAGGACATGCAAAGTGCAGAGAAAGCTGGGCAGCGGGGCAGCGGGCCAGGGCTTGCCCCGTaGCGCAGCAGCAGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLEDMQSAEKAGQRGSGPGLAP*RSSSSA Trigger: GGCCGAGCTGCTGCTGCGCCACGGGGCAAGCCCTGG...CCCGCTGCCCCGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | CTACTCCTGGAGGACATGCAAAGTGCAGAGAAAGCTGGGCAGCGGGGCAGCGGGTCAAGCTCAGCCCCCTaGAGGATAAGGTGTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLLEDMQSAEKAGQRGSGSSSAP*RIRCRA Trigger: CGCCCGACACCTTATCCTGCAGGGGGCTGAGCTTGA...CCCGCTGCCCCGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTACTCCTGGAGGACATGCAAAGTGCAGAGAAAGCTGGGCAGCGGGGCAGCGGGACAGGCGTTGTGCAGTaGCGTGTGACGCTTGCGACC | + |
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Preference number: 4 (lower is better) Translates to: LLLEDMQSAEKAGQRGSGTGVVQ*RVTLAT Trigger: GGTCGCAAGCGTCACACGCCACTGCACAACGCCTGT...CCCGCTGCCCCGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGCCTCGTGCTGCCGGCTaGTGCCTGGTCCCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLPRAAG*CLVPLL Trigger: GAGCAGAGGGACCAGGCAGCAGCCGGCAGCACGAGG...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGTGGCTTAAGATGTCAGTGGAGGGACAAGCTACTCCTGGAGGACATGCATCTCTCCCTGGCTGGTaGGCAGAGCCACGTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRWLKMSVEGQATPGGHASLPGW*AEPRPH Trigger: GTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGA...TGCATGTCCTCCAGGAGTAGCTTGTCCCTCCACTGACATCTTAAGCCACCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGTGGCTTAAGATGTCAGTGGAGGGACAAGCTACTCCTGGAGGACATGCAGGCATTGTGGACAGCTaGGTCTCGGCAGGAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SRWLKMSVEGQATPGGHAGIVDS*VSAGAA Trigger: CGCCGCTCCTGCCGAGACCCAGCTGTCCACAATGCC...TGCATGTCCTCCAGGAGTAGCTTGTCCCTCCACTGACATCTTAAGCCACCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTACTCCTGGAGGACATGCAAAGTGCAGAGAAAGCTGGGCAGCGGGGCAGCGGGGGGCCCGAGGAAAGTTaGCACAGTGTTTCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LLLEDMQSAEKAGQRGSGGPEES*HSVSAS Trigger: AGATGCTGAAACACTGTGCCAACTTTCCTCGGGCCC...CCCGCTGCCCCGCTGCCCAGCTTTCTCTGCACTTTGCATGTCCTCCAGGAGTAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGTGGCTTAAGATGTCAGTGGAGGGACAAGCTACTCCTGGAGGACATGCACGAGCTGCAGCCACATaGAGGGGCGTGACTTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: SRWLKMSVEGQATPGGHARAAAT*RGVTSL Trigger: GAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCG...TGCATGTCCTCCAGGAGTAGCTTGTCCCTCCACTGACATCTTAAGCCACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGTGGCTTAAGATGTCAGTGGAGGGACAAGCTACTCCTGGAGGACATGCATTCCAGGCCACGAGCTaGAGCCACATGCAGGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SRWLKMSVEGQATPGGHAFQATS*SHMQGR Trigger: ACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAA...TGCATGTCCTCCAGGAGTAGCTTGTCCCTCCACTGACATCTTAAGCCACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | TGCTGGGCCTGTATACGGAGGAGGTCGGAGGACAGACCCAACAGAATCTTGCCTGCTGACCAGGCCAGCTaGTTGCTCACAGTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: CWACIRRRSEDRPNRILPADQAS*LLTVST Trigger: TGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGC...AGGCAAGATTCTGTTGGGTCTGTCCTCCGACCTCCTCCGTATACAGGCCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGCTTTGTAACTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATAAGCGCCGTCTCTCCCTaGCTGGTGCGCAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GFVTGHLFSVVCQAWGSISAVSP*LVRRAT Trigger: CGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCT...TATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAGTTACAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGATCAGCAGGTGGCTTAAGATGTCAGTGGAGGGACAAGCTACTCCTGGATTGCGACCGGCAGCCTaGGGATCAGCCCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKISRWLKMSVEGQATPGLRPAA*GSAPAS Trigger: GGAAGCTGGGGCTGATCCCCAGGCTGCCGGTCGCAA...TCCAGGAGTAGCTTGTCCCTCCACTGACATCTTAAGCCACCTGCTGATCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR TCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGGCAGCAGGTAGTCTCTaGGCAGTGGAGGCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLAAGSL*AVEAGE Trigger: TTCCCCTGCCTCCACTGCTCAGAGACTACCTGCTGC...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGGTAGTCTCTGAGCAGTaGAGGCAGGGGAAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLVVSEQ*RQGKLG Trigger: GCCCAGCTTCCCCTGCCTCCACTGCTCAGAGACTAC...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGACGTGCTGCCGGCTGCTaGCTGGTCCCTCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAKRSCHNCGFNREEDGGRAAGC*LVPLLQ Trigger: CTGGAGCAGAGGGACCAGGCAGCAGCCGGCAGCACG...TCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CAA 72 bp | AGTTCTGGAAGTGGTAACCAGTTTACTGAGCCCACGTaGCTGGGCCTGTATACGGAGGAGGTCGGAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSGNQFTEPT*LGLYTEEVGGQ Trigger: CTGTCCTCCGACCTCCTCCGTATACAGGCCCAGCAACGTGGGCTCAGTAAACTGGTTACCACTTCCAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGGTAGTCCAGCAGTGCTaGAAAGAGGACCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFSVVCQAWGSIPSAEVVQQC*KEDLWL Trigger: GAGCCAGAGGTCCTCTTTGCAGCACTGCTGGACTAC...CTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GAGGTCGGAGGACAGACCCAACAGAATCTTGCCTACATCTTGTTGAGGTTTTTCCCTCTGGCTCCCAGTTaGGGGCGTCCTGTACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVGGQTQQNLAYILLRFFPLAPS*GRPVPL Trigger: AAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGG...GAAAAACCTCAACAAGATGTAGGCAAGATTCTGTTGGGTCTGTCCTCCGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGCGATGGTAAGAGGTaGCGTCTGCTTGGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLSDGKR*RLLGLW Trigger: CCAAAGACCAAGCAGACGGCACCTCTTACCATCGCT...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGCAACTTGGCGCACTaGAAAGACTCCGGAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLSNLAH*KDSGDV Trigger: CACATCTCCGGAGTCTTTGCAGTGCGCCAAGTTGCT...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGCCAGGGGTCACAGGATaGAACACATGGGTAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LDTCSAWYVKPGVPYLVLPGVTG*NTWVGI Trigger: AATGCCTACCCATGTGTTCCATCCTGTGACCCCTGG...CAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
||
| 3UTR CAA 72 bp | TTCCACCTCCCAAATGATGTCACTCACTGTGGAAGGTaGGCTTCGCTGTTTTCCGGTTCCGTTCCGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHLPNDVTHCGR*ASLFSGSVPDP Trigger: TGGATCCGGAACGGAACCGGAAAACAGCGAAGCCAACCTTCCACAGTGAGTGACATCATTTGGGAGGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR TCA 90 bp | AGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAGAATCCCTGTTCCGCTaGCCAGGCCAGCTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAKRSCHNCGFNREEDGGESLFR*PGQLVA Trigger: AGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTC...TCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | TTACTTTTGTCTCTGGGTCCAAAAGTAAGAGAGGACAGCTTTCTAGCTTTCTGGCAAGGGAGGTCCCTGTaGCTGCGGCACTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLGPKVREDSFLAFWQGRSL*LRHCWA Trigger: TGCCCAGCAGTGCCGCAGGCACAGGGACCTCCCTTG...CCAGAAAGCTAGAAAGCTGTCCTCTCTTACTTTTGGACCCAGAGACAAAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGAACAGGATTTGGAGCTaGTGTAGGTCCCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFSVVCQAWGSIPSAENRIWS*CRSPEN Trigger: GTTCTCTGGGGACCTACAGCAGCTCCAAATCCTGTT...CTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAGAGGGACTCTGACGTAAGAGGTGCCGTCTaGTTGGTCTTTGGAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVALTEKRMGERDSDVRGAV*LVFGVS Trigger: GCTGACTCCAAAGACCAAGCAGACGGCACCTCTTAC...GTCAGAGTCCCTCTCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGAAAACACATTATAAAAGCCTCTTCAAAGACTACAGCCTCAAGCTCAGGATCACTGCCGGCTGCTGCCTaGTCCCTCTGCTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKHIIKASSKTTASSSGSLPAAA*SLCSSA Trigger: TGCGCTGGAGCAGAGGGACCAGGCAGCAGCCGGCAG...TGATCCTGAGCTTGAGGCTGTAGTCTTTGAAGAGGCTTTTATAATGTGTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGAAGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGCAGCGCGCAGTCCATTaGTGTGTGGCCTGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GRAKRSCHNCGFNREEDGQRAVH*CVACPI Trigger: AATGGGGCAGGCCACACACCAATGGACTGCGCGCTG...CCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AAAAAGTGGGGAAGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAACATTGGTGTGTGGCCTaGCCCATTGGTGACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKWGRLCQAVSKKGSVLEHWCVA*PIGDSR Trigger: CCTGGAGTCACCAATGGGGCAGGCCACACACCAATG...TTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | TTACTTTTGTCTCTGGGTCCAAAAGTAAGAGAGGACAGCTTTCTAGCTTTCTGGCTAAGGAGCTGGGCCTaGGGACAAGGGAGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLGPKVREDSFLAFWLRSWA*GQGRSL Trigger: CAGGGACCTCCCTTGTCCCCAGGCCCAGCTCCTTAG...CCAGAAAGCTAGAAAGCTGTCCTCTCTTACTTTTGGACCCAGAGACAAAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGAAAACACATTATAAAAGCCTCTTCAAAGACTACAGCCTCAAGCTCAGGATCACGAGGCCTAAGGAGCTaGGCCTGGGGACAAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKHIIKASSKTTASSSGSRGLRS*AWGQGR Trigger: CCTCCCTTGTCCCCAGGCCCAGCTCCTTAGGCCTCG...TGATCCTGAGCTTGAGGCTGTAGTCTTTGAAGAGGCTTTTATAATGTGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTGGATACCGTCTCTCCCTGGCTaGTGCGCAGAGCCACGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EENQAKLPFFEVLPSVWIPSLPG*CAEPRP Trigger: CGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGG...TATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| 3UTR CAA 72 bp | ATAGGCGGTGAGGAGAAACTGCATGGGATCAGTTGCTaGTCGCTTGGGTGGCTACAGAGGCCATCTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGGEEKLHGISC*SLGWLQRPSID Trigger: ATCAATAGATGGCCTCTGTAGCCACCCAAGCGACAAGCAACTGATCCCATGCAGTTTCTCCTCACCGCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | AAAAAGTGGGGAAGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAAAGACTCCGGAGATGTaGAGAGGTGCAAGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKWGRLCQAVSKKGSVLEKTPEM*RGARGS Trigger: TGACCCCCTTGCACCTCTGCACATCTCCGGAGTCTT...TTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCTTCCCCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGCTTTGTAACTGGACACTTGTTCAGCGTGGTATGTCAAGCCTGGGGTTCCATATCTTGGAACAGGATTTaGAGCTGCTGTAGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFVTGHLFSVVCQAWGSISWNRI*SCCRSP Trigger: TGGGGACCTACAGCAGCTCCAAATCCTGTTCCAAGA...TATGGAACCCCAGGCTTGACATACCACGCTGAACAAGTGTCCAGTTACAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | TTACTTTTGTCTCTGGGTCCAAAAGTAAGAGAGGACAGCTTTCTAGCTTTCTGGGAGAACAGGGCATTGTaGACAGCTGGGTCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLGPKVREDSFLAFWENRAL*TAGSRQ Trigger: CTGCCGAGACCCAGCTGTCCACAATGCCCTGTTCTC...CCAGAAAGCTAGAAAGCTGTCCTCTCTTACTTTTGGACCCAGAGACAAAAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | CCTAGTGCTGAGAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCATGCAAAGAGGACCTCTaGCTCCCAGTTGGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSAEKKTKQNYHSLKFYPCKEDL*LPVGGV Trigger: GACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCA...TGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTCTCAGCACTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTGGATATCCAGCCACTCTCTCTaGAGGCGGAGAGCACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EENQAKLPFFEVLPSVWISSHSL*RRRARS Trigger: ACTGCGTGCTCTCCGCCTGCAGAGAGAGTGGCTGGA...TATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GGAAGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGTGACTTCGCTCTCTTaGGATGCCACATTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAKRSCHNCGFNREEDGVTSLS*DATFTD Trigger: GTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCAC...CCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR GCA 90 bp | GGAAAACACATTATAAAAGCCTCTTCAAAGACTACAGCCTCAAGCTCAGGATCATCGAACAGCCAAGCGTaGCAGGTGCTGCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKHIIKASSKTTASSSGSSNSQA*QVLQLS Trigger: AGACAGCTGCAGCACCTGGCACGCTTGGCTGTTCGA...TGATCCTGAGCTTGAGGCTGTAGTCTTTGAAGAGGCTTTTATAATGTGTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAGAGGGACTCTGACTCTCCACAATCATATTaGCAGCGTCTTCATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVALTEKRMGERDSDSPQSY*QRLHLG Trigger: TCCAAGATGAAGACGCTGCCAATATGATTGTGGAGA...GTCAGAGTCCCTCTCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | AGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAGTGGTAACCAGTTGCAGCTGTCTTGGCTaGTTTTCCATGCTTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLCQAVSKKGSVLEVVTSCSCLG*FSMLRA Trigger: AGCTCTAAGCATGGAAAACCAGCCAAGACAGCTGCA...ACTGGTTACCACTTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR TCA 90 bp | CCTAGTGCTGAGAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGCAGTGTGGAGGATGTaGAAGGAAAGCTCTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAEKKTKQNYHSLKFYPAVWRM*KESSPL Trigger: CAGGGGAGAGCTTTCCTTTCACATCCTCCACACTGC...TGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTCTCAGCACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GGAAGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGACAGGATGGAACACATaGGTAGGCATTAAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAKRSCHNCGFNREEDGTGWNT*VGIKED Trigger: GTCCTCCTTAATGCCTACCCATGTGTTCCATCCTGT...CCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTGGATAGCAGCGTCTTCATCTTaGAACAGGATTTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EENQAKLPFFEVLPSVWIAASSS*NRIWSC Trigger: GCAGCTCCAAATCCTGTTCCAAGATGAAGACGCTGC...TATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | CGGCGAGGCCTAAGGAGCTGGGCCTGGGGACAAGGGAGGTCCCTGTaGCTGCGGCACTGCTGGGCAGCAGCTCTCCTCCTGTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRGLRSWAWGQGRSL*LRHCWAAALLLSSQ Trigger: CTGGGAGGACAGGAGGAGAGCTGCTGCCCAGCAGTGCCGCAGGCACAGGGACCTCCCTTGTCCCCAGGCCCAGCTCCTTAGGCCTCGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | CAGCTTCCAGGAGCTGTCGCGCTGCGGCCTCGTGCTGCCGGCTGCTaGCTGGTCCCTCTGCTCCAGCGCACGCAGCGTTTAGCGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLPGAVALRPRAAGC*LVPLLQRTQRLAPS Trigger: AGACGGCGCTAAACGCTGCGTGCGCTGGAGCAGAGGGACCAGGCAGCAGCCGGCAGCACGAGGCCGCAGCGCGACAGCTCCTGGAAGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 90 bp | CCGCTTGCAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCCATTGGTaGCTCCAGGGCTTGCCCCGTGGCGCAGCAGCAGCTCGGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLAARSPLVCGLPHW*LQGLPRGAAAARPD Trigger: GTCTGGCCGAGCTGCTGCTGCGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | GGCGTCCTGTACCGCTTGCAGCGCGCAGTCCATTGGTGTGTGGCCTaGCCCATTGGTGACTCCAGGGCTTGCCCCGTGGCGCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLYRLQRAVHWCVA*PIGDSRACPVAQQQ Trigger: CTGCTGCTGCGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | CCTCTGCTCCAGCGCACGCAGCGTTTAGCGCCGTCTCTCCCTGGCTaGTGCGCAGAGCCACGTCCGCACCGTTCTGCAGGTAGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLQRTQRLAPSLPG*CAEPRPHRSAGRGP Trigger: TGGCCCTCTACCTGCAGAACGGTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCTAAACGCTGCGTGCGCTGGAGCAGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
||
| CDS CCA 90 bp | CAGCTCGGCCAGACCTCCGCAGCCATTAGCACAGGCGTTGTGCAGTaGCGTGTGACGCTTGCGACCGGCAGCCTGGGGATCAGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGQTSAAISTGVVQ*RVTLATGSLGISPS Trigger: GCTGGGGCTGATCCCCAGGCTGCCGGTCGCAAGCGTCACACGCCACTGCACAACGCCTGTGCTAATGGCTGCGGAGGTCTGGCCGAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 90 bp | GCCAGACCTCCGCAGCCATTAGCACAGGCGTTGTGCAGTGGCGTGTaGCGCTTGCGACCGGCAGCCTGGGGATCAGCCCCAGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARPPQPLAQALCSGV*RLRPAAWGSAPASR Trigger: CCTGGAAGCTGGGGCTGATCCCCAGGCTGCCGGTCGCAAGCGTCACACGCCACTGCACAACGCCTGTGCTAATGGCTGCGGAGGTCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
||
| CDS GCA 90 bp | CTGCTCCAGCGCACGCAGCGTTTAGCGCCGTCTCTCCCTGGCTGGTaGGCAGAGCCACGTCCGCACCGTTCTGCAGGTAGAGGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQRTQRLAPSLPGW*AEPRPHRSAGRGPH Trigger: ATGTGGCCCTCTACCTGCAGAACGGTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCTAAACGCTGCGTGCGCTGGAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
||
| CDS CCA 90 bp | ATTGGTGTGTGGCCTGCCCCATTGGTGACTCCAGGGCTTGCCCCGTaGCGCAGCAGCAGCTCGGCCAGACCTCCGCAGCCATTAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IGVWPAPLVTPGLAP*RSSSSARPPQPLAQ Trigger: CTGTGCTAATGGCTGCGGAGGTCTGGCCGAGCTGCTGCTGCGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
||
| CDS CCA 90 bp | AACCGGCTGAGCCCCGTAGTCCAGCAGTGCTGCAAAGAGGACCTCTaGCTCCCAGTTGGGGGCGTCCTGTACCGCTTGCAGCGCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRLSPVVQQCCKEDL*LPVGGVLYRLQRAV Trigger: GACTGCGCGCTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCAGCACTGCTGGACTACGGGGCTCAGCCGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | CAGCATCTCAGGGTGAACCGGCTGAGCCCCGTAGTCCAGCAGTGCTaGAAAGAGGACCTCTGGCTCCCAGTTGGGGGCGTCCTGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QHLRVNRLSPVVQQC*KEDLWLPVGGVLYR Trigger: GCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCAGCACTGCTGGACTACGGGGCTCAGCCGGTTCACCCTGAGATGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | CTGCCACAGCTCCGGGAGCACGGCCTCCACCCAGGGGTCACAGGATaGAACACATGGGTAGGCATTAAGGAGGACTTCCAGGGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPQLREHGLHPGVTG*NTWVGIKEDFQGPR Trigger: CCTCGGGCCCTGGAAGTCCTCCTTAATGCCTACCCATGTGTTCCATCCTGTGACCCCTGGGTGGAGGCCGTGCTCCCGGAGCTGTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | CTGGATTCGTCCCTCCACACCCAGCAGCAGGTAGTCTCTGAGCAGTaGAGGCAGGGGAAGCTGGGCCGCAGCCTGACGACAGTGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LDSSLHTQQQVVSEQ*RQGKLGRSLTTVAT Trigger: GGTAGCCACTGTCGTCAGGCTGCGGCCCAGCTTCCCCTGCCTCCACTGCTCAGAGACTACCTGCTGCTGGGTGTGGAGGGACGAATCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | GCAAAGAGGACCTCTGGCTCCCAGTTGGGGGCGTCCTGTACCGCTTaGAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCCATTGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AKRTSGSQLGASCTA*SAQSIGVWPAPLVT Trigger: AGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | TTGGCACCAAATGTGAGCAGGAGCCGAACACAGTCGGGATGGGCTTaGGCACACGCCTCGTGCAAGGCAGCACGCCCTCCAATTCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LAPNVSRSRTQSGWA*AHASCKAARPPIRA Trigger: CGCCCGAATTGGAGGGCGTGCTGCCTTGCACGAGGCGTGTGCCCAAGCCCATCCCGACTGTGTTCGGCTCCTGCTCACATTTGGTGCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | CTCCGGGAGCACGGCCTCCACCCAGGGGTCACAGGATGGAACACATaGGTAGGCATTAAGGAGGACTTCCAGGGCCCGAGGAAAGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LREHGLHPGVTGWNT*VGIKEDFQGPRKVG Trigger: GCCAACTTTCCTCGGGCCCTGGAAGTCCTCCTTAATGCCTACCCATGTGTTCCATCCTGTGACCCCTGGGTGGAGGCCGTGCTCCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | ACGAGCTGCAGCCACATGCAGGGGCGTGACTTCGCTCTCTTGCGATaGCACATTCACAGACGCTCCAGCCTCCAGCAGCAACTTGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: TSCSHMQGRDFALLR*HIHRRSSLQQQLGA Trigger: TGCGCCAAGTTGCTGCTGGAGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | AGGCCACGAGCTGCAGCCACATGCAGGGGCGTGACTTCGCTCTCTTaGGATGCCACATTCACAGACGCTCCAGCCTCCAGCAGCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: RPRAAATCRGVTSLS*DATFTDAPASSSNL Trigger: CAAGTTGCTGCTGGAGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | ACCGTTCTGCAGGTAGAGGGCCACATGTTGTTCCAGGCCACGAGCTaGAGCCACATGCAGGGGCGTGACTTCGCTCTCTTGCGATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLQVEGHMLFQATS*SHMQGRDFALLRCH Trigger: GTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAACAACATGTGGCCCTCTACCTGCAGAACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | TTTCAGCATCTCAGGGTGAACCGGCTGAGCCCCGTAGTCCAGCAGTaGTGCAAAGAGGACCTCTGGCTCCCAGTTGGGGGCGTCCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FQHLRVNRLSPVVQQ*CKEDLWLPVGGVLY Trigger: GTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCAGCACTGCTGGACTACGGGGCTCAGCCGGTTCACCCTGAGATGCTGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 90 bp | CCACATGTTGTTCCAGGCCACGAGCTGCAGCCACATGCAGGGGCGTaGCTTCGCTCTCTTGCGATGCCACATTCACAGACGCTCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PHVVPGHELQPHAGA*LRSLAMPHSQTLQP Trigger: AGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAACAACATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | TTAGCCTTGGCACCAAATGTGAGCAGGAGCCGAACACAGTCGGGATaGGCTTGGGCACACGCCTCGTGCAAGGCAGCACGCCCTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LALAPNVSRSRTQSG*AWAHASCKAARPPI Trigger: AATTGGAGGGCGTGCTGCCTTGCACGAGGCGTGTGCCCAAGCCCATCCCGACTGTGTTCGGCTCCTGCTCACATTTGGTGCCAAGGCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | AGCAGCAACTTGGCGCACTGCAAAGACTCCGGAGATGTGCAGAGGTaGAAGGGGGTCATGCCCTCCTCAGACGATACATTAGCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSNLAHCKDSGDVQR*KGVMPSSDDTLALA Trigger: TGCCAAGGCTAATGTATCGTCTGAGGAGGGCATGACCCCCTTGCACCTCTGCACATCTCCGGAGTCTTTGCAGTGCGCCAAGTTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | CAGCCAAGCGTGCCAGGTGCTGCAGCTGTCTTGGCTGGTTTTCCATaGTTAGAGCTGAGCTGTAGAAGGCTTCATGTTCCTGCCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: QPSVPGAAAVLAGFP*LELSCRRLHVPATA Trigger: AGCTGTGGCAGGAACATGAAGCCTTCTACAGCTCAGCTCTAAGCATGGAAAACCAGCCAAGACAGCTGCAGCACCTGGCACGCTTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 90 bp | GAGTCAGCACCCAGAATCCCTGTTCCGCTGACCAGGCCAGCTGGTTaGTCACAGTCTCCACAATCATATTGGCAGCGTCTTCATCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESAPRIPVPLTRPAG*SQSPQSYWQRLHLG Trigger: TCCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGTGCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | CCGCTGACCAGGCCAGCTGGTTGCTCACAGTCTCCACAATCATATTaGCAGCGTCTTCATCTTGGAACAGGATTTGGAGCTGCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLTRPAGCSQSPQSY*QRLHLGTGFGAAVG Trigger: ACCTACAGCAGCTCCAAATCCTGTTCCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 90 bp | TTTGGAGTCAGCACCCAGAATCCCTGTTCCGCTGACCAGGCCAGCTaGTTGCTCACAGTCTCCACAATCATATTGGCAGCGTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FGVSTQNPCSADQAS*LLTVSTIILAASSS Trigger: AGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGTGCTGACTCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAACAGTCGGGATGGGCTaGGGCACACGCCTCGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAKRSCHNCGFNREEDGGTVGMG*GTRLVQ Trigger: TTGCACGAGGCGTGTGCCCAAGCCCATCCCGACTGT...TCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAGAGGGACTCTGACGGCAGCGTCTTCATCTaGGAACAGGATTTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVTIVALTEKRMGERDSDGSVFI*EQDLEL Trigger: CAGCTCCAAATCCTGTTCCAAGATGAAGACGCTGCC...GTCAGAGTCCCTCTCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTAAAAGGAGCTGTCACAATTGTGGCTTTAACAGAGAAGAGGATGGGGGAGCCTCCAGCAGCAACTaGGCGCACTGCAAAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAKRSCHNCGFNREEDGGASSSN*AHCKDS Trigger: GGAGTCTTTGCAGTGCGCCAAGTTGCTGCTGGAGGC...TCCCCCATCCTCTTCTCTGTTAAAGCCACAATTGTGACAGCTCCTTTTAGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | AGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAGTGGTAACCAGTAGGGCCCGAGGAAAGTaGGCACAGTGTTTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLCQAVSKKGSVLEVVTSRARGK*AQCFSI Trigger: GATGCTGAAACACTGTGCCAACTTTCCTCGGGCCCT...ACTGGTTACCACTTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | TGGTATGTCAAGCCTGGGGTTCCATACCTAGTGCTGAGAAGAAAACCAAGCAAAGGTGCTGCAGCTGTCTaGGCTGGTTTTCCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WYVKPGVPYLVLRRKPSKGAAAV*AGFPCL Trigger: TAAGCATGGAAAACCAGCCAAGACAGCTGCAGCACC...TTTGCTTGGTTTTCTTCTCAGCACTAGGTATGGAACCCCAGGCTTGACATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | AGACTGTGCCAAGCAGTTTCCAAGAAGGGTTCAGTTCTGGAAGTGGTAACCAGTGTCTCCACAATCATATaGGCAGCGTCTTCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCQAVSKKGSVLEVVTSVSTII*AASSSW Trigger: CCAAGATGAAGACGCTGCCAATATGATTGTGGAGAC...ACTGGTTACCACTTCCAGAACTGAACCCTTCTTGGAAACTGCTTGGCACAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS-3UTR CAA 90 bp | GAAGAAAACCAAGCAAAACTACCATTCTTTGAAGTTCTACCCAGTGTCTGGATAAGAGGTGCCGTCTGCTaGGTCTTTGGAGTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EENQAKLPFFEVLPSVWIRGAVC*VFGVST Trigger: GGTGCTGACTCCAAAGACCAAGCAGACGGCACCTCT...TATCCAGACACTGGGTAGAACTTCAAAGAATGGTAGTTTTGCTTGGTTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | CCAGCTTCCAGGAGCTGTCGCGCTGCGGCCTCGTGCTaGCGGCTGCTGCCTGGTCCCTCTGCTCCAGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: PASRSCRAAASC*RLLPGPSAPAH Trigger: GTGCGCTGGAGCAGAGGGACCAGGCAGCAGCCGGCAGCACGAGGCCGCAGCGCGACAGCTCCTGGAAGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | CTGGGGATCAGCCCCAGCTTCCAGGAGCTGTCGCGCTaGGGCCTCGTGCTGCCGGCTGCTGCCTGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LGISPSFQELSR*GLVLPAAAWSL Trigger: GAGGGACCAGGCAGCAGCCGGCAGCACGAGGCCGCAGCGCGACAGCTCCTGGAAGCTGGGGCTGATCCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | GCCTGGGGACAAGGGAGGTCCCTGTGCCTGCGGCACTaGTGGGCAGCAGCTCTCCTCCTGTCCTCCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: AWGQGRSLCLRH*WAAALLLSSQS Trigger: GGACTGGGAGGACAGGAGGAGAGCTGCTGCCCAGCAGTGCCGCAGGCACAGGGACCTCCCTTGTCCCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | GCTCCAGCGCACGCAGCGTTTAGCGCCGTCTCTCCCTaGCTGGTGCGCAGAGCCACGTCCGCACCGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APAHAAFSAVSP*LVRRATSAPFC Trigger: GCAGAACGGTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCTAAACGCTGCGTGCGCTGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | TGTACCGCTTGCAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCCATaGGTGACTCCAGGGCTTGCCCCGTGGCGCAGCAGCAGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CTACSAQSIGVWPAP*VTPGLAPWRSSSSA Trigger: GGCCGAGCTGCTGCTGCGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 72 bp | GCGCGCAGTCCATTGGTGTGTGGCCTGCCCCATTGGTaGCTCCAGGGCTTGCCCCGTGGCGCAGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSPLVCGLPHW*LQGLPRGAAAA Trigger: AGCTGCTGCTGCGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | CAGCGCACGCAGCGTTTAGCGCCGTCTCTCCCTGGCTaGTGCGCAGAGCCACGTCCGCACCGTTCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QRTQRLAPSLPG*CAEPRPHRSAG Trigger: ACCTGCAGAACGGTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCTAAACGCTGCGTGCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | GACCTCTGGCTCCCAGTTGGGGGCGTCCTGTACCGCTaGCAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DLWLPVGGVLYR*QRAVHWCVACP Trigger: GGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 72 bp | CCGCAGCCATTAGCACAGGCGTTGTGCAGTGGCGTGTaGCGCTTGCGACCGGCAGCCTGGGGATCAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQPLAQALCSGV*RLRPAAWGSAP Trigger: TGGGGCTGATCCCCAGGCTGCCGGTCGCAAGCGTCACACGCCACTGCACAACGCCTGTGCTAATGGCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | CGCACGCAGCGTTTAGCGCCGTCTCTCCCTGGCTGGTaGGCAGAGCCACGTCCGCACCGTTCTGCAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTQRLAPSLPGW*AEPRPHRSAGR Trigger: TCTACCTGCAGAACGGTGCGGACGTGGCTCTGCGCACCAGCCAGGGAGAGACGGCGCTAAACGCTGCGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | TACCGCTTGCAGCGCGCAGTCCATTGGTGTGTGGCCTaGCCCATTGGTGACTCCAGGGCTTGCCCCGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: YRLQRAVHWCVA*PIGDSRACPVA Trigger: CGCCACGGGGCAAGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | ACCTCTGGCTCCCAGTTGGGGGCGTCCTGTACCGCTTaGAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSGSQLGASCTA*SAQSIGVWPAP Trigger: TGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | GGGGGCGTCCTGTACCGCTTGCAGCGCGCAGTCCATTaGTGTGTGGCCTGCCCCATTGGTGACTCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGVLYRLQRAVH*CVACPIGDSRA Trigger: AGCCCTGGAGTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | CAGACCTCCGCAGCCATTAGCACAGGCGTTGTGCAGTaGCGTGTGACGCTTGCGACCGGCAGCCTGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QTSAAISTGVVQ*RVTLATGSLGI Trigger: GATCCCCAGGCTGCCGGTCGCAAGCGTCACACGCCACTGCACAACGCCTGTGCTAATGGCTGCGGAGGTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | GCGCAGAGCCACGTCCGCACCGTTCTGCAGGTAGAGGGCCACATGTaGTTCCAGGCCACGAGCTGCAGCCACATGCAGGGGCGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQSHVRTVLQVEGHM*FQATSCSHMQGRDF Trigger: GAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAACAACATGTGGCCCTCTACCTGCAGAACGGTGCGGACGTGGCTCTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | TGGAGCTGCTGTAGGTCCCCAGAGAACAGGGCATTGTaGACAGCTGGGTCTCGGCAGGAGCGGCGAGGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: WSCCRSPENRAL*TAGSRQERRGL Trigger: TAGGCCTCGCCGCTCCTGCCGAGACCCAGCTGTCCACAATGCCCTGTTCTCTGGGGACCTACAGCAGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | AGCCCCGTAGTCCAGCAGTGCTGCAAAGAGGACCTCTaGCTCCCAGTTGGGGGCGTCCTGTACCGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPVVQQCCKEDL*LPVGGVLYRLQ Trigger: CTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCAGCACTGCTGGACTACGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | AAATGTGAGCAGGAGCCGAACACAGTCGGGATGGGCTaGGGCACACGCCTCGTGCAAGGCAGCACGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KCEQEPNTVGMG*GTRLVQGSTPS Trigger: GGAGGGCGTGCTGCCTTGCACGAGGCGTGTGCCCAAGCCCATCCCGACTGTGTTCGGCTCCTGCTCACATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | CACGTCCGCACCGTTCTGCAGGTAGAGGGCCACATGTaGTTCCAGGCCACGAGCTGCAGCCACATGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HVRTVLQVEGHM*FQATSCSHMQG Trigger: CCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAACAACATGTGGCCCTCTACCTGCAGAACGGTGCGGACGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | CTTGGCACCAAATGTGAGCAGGAGCCGAACACAGTCGGGATGGGCTaGGGCACACGCCTCGTGCAAGGCAGCACGCCCTCCAATTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGTKCEQEPNTVGMG*GTRLVQGSTPSNSG Trigger: GCCCGAATTGGAGGGCGTGCTGCCTTGCACGAGGCGTGTGCCCAAGCCCATCCCGACTGTGTTCGGCTCCTGCTCACATTTGGTGCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | TGCAAAGAGGACCTCTGGCTCCCAGTTGGGGGCGTCCTGTACCGCTaGCAGCGCGCAGTCCATTGGTGTGTGGCCTGCCCCATTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CKEDLWLPVGGVLYR*QRAVHWCVACPIGD Trigger: GTCACCAATGGGGCAGGCCACACACCAATGGACTGCGCGCTGCAAGCGGTACAGGACGCCCCCAACTGGGAGCCAGAGGTCCTCTTTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | CACGGCCTCCACCCAGGGGTCACAGGATGGAACACATaGGTAGGCATTAAGGAGGACTTCCAGGGCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HGLHPGVTGWNT*VGIKEDFQGPR Trigger: CCTCGGGCCCTGGAAGTCCTCCTTAATGCCTACCCATGTGTTCCATCCTGTGACCCCTGGGTGGAGGCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | CAGGCCACGAGCTGCAGCCACATGCAGGGGCGTGACTTCGCTCTCTaGCGATGCCACATTCACAGACGCTCCAGCCTCCAGCAGCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: QATSCSHMQGRDFAL*RCHIHRRSSLQQQL Trigger: AAGTTGCTGCTGGAGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | GCAGCAACTTGGCGCACTGCAAAGACTCCGGAGATGTaGAGAGGTGCAAGGGGGTCATGCCCTCCTCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: AATWRTAKTPEM*RGARGSCPPQT Trigger: CGTCTGAGGAGGGCATGACCCCCTTGCACCTCTGCACATCTCCGGAGTCTTTGCAGTGCGCCAAGTTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | GCCACATGTTGTTCCAGGCCACGAGCTGCAGCCACATaGAGGGGCGTGACTTCGCTCTCTTGCGATGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ATCCSRPRAAAT*RGVTSLSCDAT Trigger: TGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCTCGTGGCCTGGAACAACATGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | CTCCGGGAGCACGGCCTCCACCCAGGGGTCACAGGATaGAACACATGGGTAGGCATTAAGGAGGACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LREHGLHPGVTG*NTWVGIKEDFQ Trigger: CTGGAAGTCCTCCTTAATGCCTACCCATGTGTTCCATCCTGTGACCCCTGGGTGGAGGCCGTGCTCCCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | AGCTGCAGCCACATGCAGGGGCGTGACTTCGCTCTCTaGCGATGCCACATTCACAGACGCTCCAGCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SCSHMQGRDFAL*RCHIHRRSSLQ Trigger: CTGGAGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCTGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | AGCCACATGCAGGGGCGTGACTTCGCTCTCTTGCGATaGCACATTCACAGACGCTCCAGCCTCCAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SHMQGRDFALLR*HIHRRSSLQQQ Trigger: TTGCTGCTGGAGGCTGGAGCGTCTGTGAATGTGGCATCGCAAGAGAGCGAAGTCACGCCCCTGCATGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | GCCACATTCACAGACGCTCCAGCCTCCAGCAGCAACTaGGCGCACTGCAAAGACTCCGGAGATGTGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ATFTDAPASSSN*AHCKDSGDVQR Trigger: CCTCTGCACATCTCCGGAGTCTTTGCAGTGCGCCAAGTTGCTGCTGGAGGCTGGAGCGTCTGTGAATGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | CAGAGGTGCAAGGGGGTCATGCCCTCCTCAGACGATACATTAGCCTaGGCACCAAATGTGAGCAGGAGCCGAACACAGTCGGGATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QRCKGVMPSSDDTLA*APNVSRSRTQSGWA Trigger: AGCCCATCCCGACTGTGTTCGGCTCCTGCTCACATTTGGTGCCAAGGCTAATGTATCGTCTGAGGAGGGCATGACCCCCTTGCACCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | ACAGTGGCTACCCAGCTGAGCTCGAACAGCCAAGCGTaGCAGGTGCTGCAGCTGTCTTGGCTGGTTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TVATQLSSNSQA*QVLQLSWLVFH Trigger: ATGGAAAACCAGCCAAGACAGCTGCAGCACCTGGCACGCTTGGCTGTTCGAGCTCAGCTGGGTAGCCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS TCA 72 bp | GGTCTTTGGAGTCAGCACCCAGAATCCCTGTTCCGCTaGCCAGGCCAGCTGGTTGCTCACAGTCTCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: GLWSQHPESLFR*PGQLVAHSLHN Trigger: ATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGTGCTGACTCCAAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | AGCACCCAGAATCCCTGTTCCGCTGACCAGGCCAGCTaGTTGCTCACAGTCTCCACAATCATATTGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: STQNPCSADQAS*LLTVSTIILAA Trigger: CGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | GGAGTCAGCACCCAGAATCCCTGTTCCGCTGACCAGGCCAGCTGGTaGCTCACAGTCTCCACAATCATATTGGCAGCGTCTTCATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GVSTQNPCSADQASW*LTVSTIILAASSSW Trigger: CCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGTGCTGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | CCAGCTGAGCTCGAACAGCCAAGCGTGCCAGGTGCTGCAGCTGTCTaGGCTGGTTTTCCATGCTTAGAGCTGAGCTGTAGAAGGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PAELEQPSVPGAAAV*AGFPCLELSCRRLH Trigger: ATGAAGCCTTCTACAGCTCAGCTCTAAGCATGGAAAACCAGCCAAGACAGCTGCAGCACCTGGCACGCTTGGCTGTTCGAGCTCAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | TTGGCGCACTGCAAAGACTCCGGAGATGTGCAGAGGTaGAAGGGGGTCATGCCCTCCTCAGACGATACATTA | + |
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Preference number: 6 (lower is better) Translates to: LAHCKDSGDVQR*KGVMPSSDDTL Trigger: TAATGTATCGTCTGAGGAGGGCATGACCCCCTTGCACCTCTGCACATCTCCGGAGTCTTTGCAGTGCGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | ACCCAGAATCCCTGTTCCGCTGACCAGGCCAGCTGGTaGCTCACAGTCTCCACAATCATATTGGCAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TQNPCSADQASW*LTVSTIILAAS Trigger: AGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGAACAGGGATTCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | AAGGGGGTCATGCCCTCCTCAGACGATACATTAGCCTaGGCACCAAATGTGAGCAGGAGCCGAACACAGTCG | + |
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Preference number: 6 (lower is better) Translates to: KGVMPSSDDTLA*APNVSRSRTQS Trigger: CGACTGTGTTCGGCTCCTGCTCACATTTGGTGCCAAGGCTAATGTATCGTCTGAGGAGGGCATGACCCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 72 bp | CTCGAACAGCCAAGCGTGCCAGGTGCTGCAGCTGTCTaGGCTGGTTTTCCATGCTTAGAGCTGAGCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LEQPSVPGAAAV*AGFPCLELSCR Trigger: TCTACAGCTCAGCTCTAAGCATGGAAAACCAGCCAAGACAGCTGCAGCACCTGGCACGCTTGGCTGTTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CAA 90 bp | TCCGCTGACCAGGCCAGCTGGTTGCTCACAGTCTCCACAATCATATaGGCAGCGTCTTCATCTTGGAACAGGATTTGGAGCTGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SADQASWLLTVSTII*AASSSWNRIWSCCR Trigger: CCTACAGCAGCTCCAAATCCTGTTCCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCTGGTCAGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS GCA 72 bp | GTGCCAGGTGCTGCAGCTGTCTTGGCTGGTTTTCCATaGTTAGAGCTGAGCTGTAGAAGGCTTCATGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPGAAAVLAGFP*LELSCRRLHVP Trigger: AGGAACATGAAGCCTTCTACAGCTCAGCTCTAAGCATGGAAAACCAGCCAAGACAGCTGCAGCACCTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | ACAGTCTCCACAATCATATTGGCAGCGTCTTCATCTTaGAACAGGATTTGGAGCTGCTGTAGGTCCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TVSTIILAASSS*NRIWSCCRSPE Trigger: CTCTGGGGACCTACAGCAGCTCCAAATCCTGTTCCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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| CDS CCA 72 bp | AGGCCAGCTGGTTGCTCACAGTCTCCACAATCATATTaGCAGCGTCTTCATCTTGGAACAGGATTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RPAGCSQSPQSY*QRLHLGTGFGA Trigger: AGCTCCAAATCCTGTTCCAAGATGAAGACGCTGCCAATATGATTGTGGAGACTGTGAGCAACCAGCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036467.5 |
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