Pregenerated sensors for ASB15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029685Ensembl transcript IDs: ENSMUST00000031696.10, ENSMUST00000117688.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACAGCTGAATCAGGATCCGCAGCGTAAGGGGTCAGCTAATCAGTaGGAGAGAGGCGTAAAGGAGAGGAAAGAGCGCTTCAGATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: QQLNQDPQRKGSANQ*ERGVKERKERFRWR Trigger: TCTCCATCTGAAGCGCTCTTTCCTCTCCTTTACGCCTCTCTCCCACTGATTAGCTGACCCCTTACGCTGCGGATCCTGATTCAGCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 90 bp | GAGAGAGGCGTAAAGGAGAGGAAAGAGCGCTTCAGATGGAGAGGGTaGAGGAAATGTAAAGGTCCTGAGGTTCACAATGGTTCCCATCTA | + |
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Preference number: 1 (lower is better) Translates to: ERGVKERKERFRWRG*RKCKGPEVHNGSHL Trigger: TAGATGGGAACCATTGTGAACCTCAGGACCTTTACATTTCCTTCACCCTCTCCATCTGAAGCGCTCTTTCCTCTCCTTTACGCCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 90 bp | TTCAGCAAGGGAATGAGCTATATTAAAGTCTCTGAAAGTTCATTCTaGAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAAAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: FSKGMSYIKVSESSF*SAVCGLCKELGKRK Trigger: CTTTCTTTTTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGACTTTAATATAGCTCATTCCCTTGCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR CCA 90 bp | ACTCTAACCTATCATATTACCACCAAGTCACTGATTATTTTAGTCTaGTTCTTATATAACATTCACATTCTAGGGCGTGTGTTTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: TLTYHITTKSLIILV*FLYNIHILGRVFGF Trigger: AAAGCCAAACACACGCCCTAGAATGTGAATGTTATATAAGAACCAGACTAAAATAATCAGTGACTTGGTGGTAATATGATAGGTTAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTAGAAGTTGTTAGGGACTaGGCCAAGGAGCGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVEVVRD*AKERWR Trigger: TCTCCAGCGCTCCTTGGCTCAGTCCCTAACAACTTC...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTACTGTCTCTAGAGGCCTaGAGGAAGAGGAGCAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVLSLEA*RKRSSL Trigger: TAGGCTGCTCCTCTTCCTGCAGGCCTCTAGAGACAG...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTACAGGGGTGGTGGTGGTaGGAAACTGGTTATTTACCT | + |
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Preference number: 2 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVQGWWW*ETGYLP Trigger: AGGTAAATAACCAGTTTCTCACCACCACCACCCCTG...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTGAGACAAGTGTTTTGTaGAGGAAGGATTTGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: SGICGTEQETVDLREKLGETSVL*RKDLRT Trigger: CGTCCTCAAATCCTTCCTTCACAAAACACTTGTCTC...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGATGGTCCCCAGCAGACTaGTCACAACCAAGGCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRWSPAD*SQPRLV Trigger: CACTAGCCTTGGTTGTGATCAGTCTGCTGGGGACCA...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGAGGGTCAGCTAATCAGTaGGAGAGAGGCGTAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRGSANQ*ERGVKE Trigger: CTCCTTTACGCCTCTCTCCCACTGATTAGCTGACCC...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGATGGAATTTGTGGGACTaGGCAGGAAACGGTGGATTT | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRWNLWD*AGNGGF Trigger: AAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCA...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGATTCAGATGGAGAGGGTaGAGGAAATGTAAAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRFRWRG*RKCKGP Trigger: AGGACCTTTACATTTCCTTCACCCTCTCCATCTGAA...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGAAATGTCGAACAGGTCTaGAGCATAGGAGACAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRNVEQV*SIGDKK Trigger: CTTTTTGTCTCCTATGCTTCAGACCTGTTCGACATT...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGAGGTCTTGGGAGAATTTaGGATGTTTATCCCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRGLGRI*DVYPKI Trigger: TATTTTGGGATAAACATCTCAAATTCTCCCAAGACC...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGAATAAAGTCTGGGAATTaGTGTAGAAGATGTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RATFISKDFRHNKESNTRIKSGN*CRRCVA Trigger: TGCTACACATCTTCTACAGCAATTCCCAGACTTTAT...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTACAGCAGCTGGCATGTTaGTGGGGCAGGGGTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVQQLAC*WGRGGG Trigger: ACCACCACCCCTGCCCCACAAACATGCCAGCTGCTG...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 72 bp | ACACGATCCTGCCCCCGTGGGGCTTCCAGTCTAGTGTaGCATAGAGTACTACAATACCACGTGAGCGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TRSCPRGASSLV*HRVLQYHVSGC Trigger: ACAGCCGCTCACGTGGTATTGTAGTACTCTATGTCACACTAGACTGGAAGCCCCACGGGGGCAGGATCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR CCA 72 bp | AATCAGGATCCGCAGCGTAAGGGGTCAGCTAATCAGTaGGAGAGAGGCGTAAAGGAGAGGAAAGAGCGCTTC | + |
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Preference number: 3 (lower is better) Translates to: NQDPQRKGSANQ*ERGVKERKERF Trigger: GAAGCGCTCTTTCCTCTCCTTTACGCCTCTCTCCCACTGATTAGCTGACCCCTTACGCTGCGGATCCTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTAGAAACTCGGTGGCATTaGCTGAGTTGGCATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVETRWH*LSWHAG Trigger: CCCAGCATGCCAACTCAGCAAATGCCACCGAGTTTC...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTATTAGCCGCAAGGAAGTaGTTAGGGACTGAGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVLAARK*LGTEPR Trigger: CCTTGGCTCAGTCCCTAACAACTTCCTTGCGGCTAA...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 72 bp | TTTATAGAATTTAGCCGCAAGGAAGTTGTTAGGGACTaGGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGG | + |
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Preference number: 3 (lower is better) Translates to: FIEFSRKEVVRD*AKERWRGWLTG Trigger: CCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGTCCCTAACAACTTCCTTGCGGCTAAATTCTATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCACCAAGTCTTTTTCACTaGGAAACAGAATTGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSPSLFH*ETELPV Trigger: CACAGGCAATTCTGTTTCCAAGTGAAAAAGACTTGG...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 72 bp | GTAAAGGAGAGGAAAGAGCGCTTCAGATGGAGAGGGTaGAGGAAATGTAAAGGTCCTGAGGTTCACAATGGT | + |
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Preference number: 3 (lower is better) Translates to: VKERKERFRWRG*RKCKGPEVHNG Trigger: ACCATTGTGAACCTCAGGACCTTTACATTTCCTTCACCCTCTCCATCTGAAGCGCTCTTTCCTCTCCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR CCA 72 bp | GAGGATATGGGTAGGGCAGTTAAAGCGTGGAGGTCTTaGGAGAATTTGAGATGTTTATCCCAAAATAATAGG | + |
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Preference number: 3 (lower is better) Translates to: EDMGRAVKAWRS*ENLRCLSQNNR Trigger: CCTATTATTTTGGGATAAACATCTCAAATTCTCCCAAGACCTCCACGCTTTAACTGCCCTACCCATATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR CCA 72 bp | TCACAATGGTTCCCATCTAAGAGACTCAGATTCTTGTaGAGCACAGTGAAGTTTTGCTTGTCAGTGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SQWFPSKRLRFL*STVKFCLSVKR Trigger: TCTCTTCACTGACAAGCAAAACTTCACTGTGCTCCACAAGAATCTGAGTCTCTTAGATGGGAACCATTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 72 bp | GGAATGAGCTATATTAAAGTCTCTGAAAGTTCATTCTaGAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GMSYIKVSESSF*SAVCGLCKELG Trigger: TCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGACTTTAATATAGCTCATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| 3UTR TCA 72 bp | GTAGGGCAGTTAAAGCGTGGAGGTCTTGGGAGAATTTaGGATGTTTATCCCAAAATAATAGGGAGTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: VGQLKRGGLGRI*DVYPKIIGSDF Trigger: AAAATCACTCCCTATTATTTTGGGATAAACATCTCAAATTCTCCCAAGACCTCCACGCTTTAACTGCCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATACGGTGTATGGGAAGATaGCCTGCTCTGTTGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TEPRSAGEAGLQGESACIRCMGR*PALLGT Trigger: TGTGCCCAACAGAGCAGGGCATCTTCCCATACACCG...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCATTGTCCCTCTGCTGCTaGGTGAATTGGAGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSLSLCC*VNWSEA Trigger: GGCCTCACTCCAATTCACTCAGCAGCAGAGGGACAA...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAAGGCAGCTCGGTGTATaGGAAGATGCCCTGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSRQLGV*EDALLC Trigger: ACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCT...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTCCACCAGACCAGCTTTaGCTGCCAGGGTCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGPPDQL*LPGSRV Trigger: CACCCTTGACCCTGGCAGTCAAAGCTGGTCTGGTGG...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATAGCTTCAATGGATTCCTaGATACAGAGCTGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: TEPRSAGEAGLQGESACIASMDS*IQSWMS Trigger: TGACATCCAGCTCTGTATTCAGGAATCCATTGAAGC...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTGAGGAAGCATCTGTATaGAGGCTGGCTGGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGEEASV*RLAGRV Trigger: GACTCTGCCAGCCAGCCTCCATACAGATGCTTCCTC...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTTATGGGAAGATGCCCTaGTCTGTTGGGCACATTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGYGKMP*SVGHIA Trigger: GGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATA...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAATCCAAGTTGGGGTCTaGACCTGCAGCCAGAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SLKVHSEVLCVDSVRNWEIQVGV*TCSQKD Trigger: GTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGAT...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCACACAGACTTCAGTTTTaGACACAGAGGGACGTAATC | + |
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Preference number: 4 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSHRLQF*TQRDVI Trigger: GATTACGTCCCTCTGTGTGCAAAACTGAAGTCTGTG...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAACAGACCAGCTTTGACTaGCAGGGTCAAGGGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKVHSEVLCVDSVRNWEQTSFD*QGQGCF Trigger: GAAACACCCTTGACCCTGGCAGTCAAAGCTGGTCTG...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTAACCAATCTTTTAGGATaGAATATAGCCTGGCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVTNLLG*NIAWLA Trigger: AGCGAGCCAGGCTATATTTCATCCTAAAAGATTGGT...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCACCATCCTTTCTCATCTaGTTCTTCCAGTGCATATTT | + |
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Preference number: 4 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSPSFLI*FFQCIF Trigger: AAATATGCACTGGAAGAAGCAGATGAGAAAGGATGG...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTAATATCTTTGCGACCTTaGTTAGCTGCCTCATGCATT | + |
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Preference number: 4 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVISLRP*LAASCI Trigger: AATGCATGAGGCAGCTAAGCAAGGTCGCAAAGATAT...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTGTATGGAGGCTGGCTaGCAGAGTCGCTGCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCCMEAG*QSRCSP Trigger: GGGACTGCAGCGACTCTGCCAGCCAGCCTCCATACA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACATTGCTGACCATCGTTTaGCACAGGGCTGGTCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTLLTIV*HRAGQG Trigger: GCCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAA...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACAGTTGGGGTCTGCACCTaGAGCCAGAAGGACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTVGVCT*SQKDFC Trigger: ACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAAC...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACATGCCTCATGCATTGCTaGCCATCGTTTGACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTCLMHC*PSFDTG Trigger: CCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCA...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAATCTTTTATTATGCATaGTGTCCACCCTGGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLKVHSEVLCVDSVRNWEIFYYA*CPPWQS Trigger: GGACTGCCAGGGTGGACATCATGCATAATAAAAGAT...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAGAGTGTCTTATAGGATaGATCCAGAACCGTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SLKVHSEVLCVDSVRNWEECLIG*IQNRLK Trigger: CTTGAGACGGTTCTGGATGCATCCTATAAGACACTC...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTCAGCAGGAGGGAGATaGAGTCAGGGTTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCSAGGR*SQGFLL Trigger: GAGGAGGAAACCCTGACTGCATCTCCCTCCTGCTGA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTGCCGCTTTTCTGAATTaGATGTTTGGATGTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGAAFLN*MFGCYW Trigger: CCAGTAACATCCAAACATGCAATTCAGAAAAGCGGC...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTAGATGTTTCCGTGCATaGAGTCAAAACATAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGRCFRA*SQNIAP Trigger: TGGAGCTATGTTTTGACTGCATGCACGGAAACATCT...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTTATTGCACATACTCCTaGAGCTCAAAAATGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGICGTEQETVDLREKLGYCTYS*SSKMRP Trigger: AGGTCGCATTTTTGAGCTCCAGGAGTATGTGCAATA...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| 3UTR CAA 72 bp | GGGTATGTGTCGAGACTTATGCCAAGTCTTTTTCACTaGGAAACAGAATTGCCTGTGCTAGTACTGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYVSRLMPSLFH*ETELPVLVLNC Trigger: GCAGTTCAGTACTAGCACAGGCAATTCTGTTTCCAAGTGAAAAAGACTTGGCATAAGTCTCGACACATACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACACCTGGAGCTCAAAAATaGGACCTTGCCTTATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTPGAQK*DLALWP Trigger: AGGCCATAAGGCAAGGTCGCATTTTTGAGCTCCAGG...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACATGCGACCTTGCCTTATaGCCTCCACAAGCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTCDLAL*PPQAFC Trigger: ACAGAAAGCTTGTGGAGGCCATAAGGCAAGGTCGCA...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACACGTTTGACACAGGGCTaGTCAAGGCTGGTGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTRLTQG*SRLVLY Trigger: ATACAACACCAGCCTTGACCAGCCCTGTGTCAAACG...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAAGGACTTCTGTGCAGTaGATATCATTATTGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLKVHSEVLCVDSVRNWERTSVQ*ISLLET Trigger: CGTCTCCAATAATGATATCCACTGCACAGAAGTCCT...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACACTCCATCACAGGTCTTaGACTCCCAGAGTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTLHHRS*TPRVSY Trigger: ATAAGACACTCTGGGAGTTCAAGACCTGTGATGGAG...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTGTCTAGCAACGTCTTaGCATTTTCCACCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCCLATS*HFPPDQ Trigger: CTGGTCTGGTGGAAAATGTCAAGACGTTGCTAGACA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTGGACGTTGCCTCTGTaGTTCAATAGCAGCGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCWTLPL*FNSSVI Trigger: TATCACGCTGCTATTGAATCACAGAGGCAACGTCCA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACAGTGAGGCCGCTTTTCTaGATTGCATGTTTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTVRPLF*IACLDV Trigger: AACATCCAAACATGCAATTCAGAAAAGCGGCCTCAC...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTCTGAGTGAATTGGAGTaGGGCCGCTTTTCTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCLSELE*GRFSEL Trigger: CAATTCAGAAAAGCGGCCTCACTCCAATTCACTCAG...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTGCTTAGCTGCCTCATaGATTGCTGACCATCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCCLAAS*IADHRL Trigger: CAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACATTTAATCGGCACAGATaGTTTAGGGAGCAAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTFNRHR*FREQGF Trigger: GAATCCTTGCTCCCTAAAGCATCTGTGCCGATTAAA...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGATCTAACACGTCACAGTaGCCATACTCAGCAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RATFISKDFRHNKESNTRSNTSQ*PYSAAT Trigger: AGTTGCTGCTGAGTATGGCCACTGTGACGTGTTAGA...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR TCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACAACATCACCACCTTTGTaGATAAGATGTTCTAACACG | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTTSPPL*IRCSNT Trigger: CGTGTTAGAACATCTTATTCACAAAGGTGGTGATGT...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTCCAGAAGGACTTCTGTaGAGTGGATATCATTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCPEGLL*SGYHYW Trigger: CCAATAATGATATCCACTGCACAGAAGTCCTTCTGG...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAACATTTATAAGCAAGGACTTTAGGCACAATAAAGAAAGCAACACAAGATGTCATTTTTGGTGTTaGGCCAGACCCCTTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RATFISKDFRHNKESNTRCHFWC*ARPLCL Trigger: TAGACAAAGGGGTCTGGCCCAACACCAAAAATGACA...TCTTGTGTTGCTTTCTTTATTGTGCCTAAAGTCCTTGCTTATAAATGTTGCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTCTGGATGTCATAACTTaGAAGATGGTCATCGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCLDVIT*KMVIVR Trigger: TCTAACGATGACCATCTTGCAAGTTATGACATCCAG...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR GCA 90 bp | TATCTTAGCAGCCTAAAAGTCTTTAAGAGTGTACATGATCTTCCCATAGGGACAAGTGCATATTTATATTaGACATACTCCTGGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLSSLKVFKSVHDLPIGTSAYLY*TYSWSS Trigger: TGAGCTCCAGGAGTATGTGCAATATAAATATGCACT...TGTCCCTATGGGAAGATCATGTACACTCTTAAAGACTTTTAGGCTGCTAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CCA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTATTTGGCGTATTTCTaGCCATTCTCTCTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCYLAYF*PFSLYF Trigger: GAAGTACAGAGAGAATGGCCAGAAATACGCCAAATA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS GCA 90 bp | AGGCAGCTCGGTGTATGGGAAGATGCCCTGCTCTGTTGGGCACATTaGCGCTTCCTCCGTACTTCAGCAGGAGGGAGATGCAGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQLGVWEDALLCWAH*RFLRTSAGGRCSQG Trigger: ACCCTGACTGCATCTCCCTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 90 bp | GTCCCTCATAGGCAGCTCGGTGTATGGGAAGATGCCCTGCTCTGTTaGGCACATTGCCGCTTCCTCCGTACTTCAGCAGGAGGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VPHRQLGVWEDALLC*AHCRFLRTSAGGRC Trigger: GCATCTCCCTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCTATGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 90 bp | CTTCGCATCGCCGCCGGGAGAGGAAGCATCTGTATGGAGGCTGGCTaGCAGAGTCGCTGCAGTCCCATAACTCGGCGAATTTTTAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRIAAGRGSICMEAG*QSRCSPITRRIFNR Trigger: CCGATTAAAAATTCGCCGAGTTATGGGACTGCAGCGACTCTGCCAGCCAGCCTCCATACAGATGCTTCCTCTCCCGGCGGCGATGCGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 90 bp | GGACGATTTCATGTCGATTGGCCCTCACCGCCACAAGGAGACAGTTaGGGGGATCCAAGTTGGGGTCTGCACCTGCAGCCAGAAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: GRFHVDWPSPPQGDS*GDPSWGLHLQPEGL Trigger: AAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGGGCCAATCGACATGAAATCGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 90 bp | TGTTGGGCACATTGCCGCTTCCTCCGTACTTCAGCAGGAGGGAGATaGAGTCAGGGTTTCCTCCTCCTGCTGCCTCGAATAGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: CWAHCRFLRTSAGGR*SQGFLLLLPRIAQM Trigger: CATCTGTGCTATTCGAGGCAGCAGGAGGAGGAAACCCTGACTGCATCTCCCTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATATCCACCAGACCAGCTTaGACTGCCAGGGTCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEPRSAGEAGLQGESACISTRPA*TARVKG Trigger: ACCCTTGACCCTGGCAGTCAAAGCTGGTCTGGTGGA...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS GCA 90 bp | AAGATAATGTCCCTCATAGGCAGCTCGGTGTATGGGAAGATGCCCTaGTCTGTTGGGCACATTGCCGCTTCCTCCGTACTTCAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KIMSLIGSSVYGKMP*SVGHIAASSVLQQE Trigger: CTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCTATGAGGGACATTATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 90 bp | GCCGGGAGAGGAAGCATCTGTATGGAGGCTGGCTGGCAGAGTCGCTaGAGTCCCATAACTCGGCGAATTTTTAATCGGCACAGATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRGSICMEAGWQSR*SPITRRIFNRHRCF Trigger: AAAGCATCTGTGCCGATTAAAAATTCGCCGAGTTATGGGACTGCAGCGACTCTGCCAGCCAGCCTCCATACAGATGCTTCCTCTCCCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATAATTGCTGACCATCGTTaGACACAGGGCTGGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEPRSAGEAGLQGESACIIADHR*TQGWSR Trigger: CCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAAT...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS GCA 90 bp | GGGGATCCAAGTTGGGGTCTGCACCTGCAGCCAGAAGGACTTCTGTaGAGTGGATATCATTATTGGAGACGGCGAAGTATAGCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDPSWGLHLQPEGLL*SGYHYWRRRSIAQS Trigger: AGACTGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 90 bp | CGCCACAAGGAGACAGTTGAGGGGATCCAAGTTGGGGTCTGCACCTaGAGCCAGAAGGACTTCTGTGCAGTGGATATCATTATTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RHKETVEGIQVGVCT*SQKDFCAVDIIIGD Trigger: GTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 90 bp | CCTCACCGCCACAAGGAGACAGTTGAGGGGATCCAAGTTGGGGTCTaGACCTGCAGCCAGAAGGACTTCTGTGCAGTGGATATCATTATT | + |
|
Preference number: 5 (lower is better) Translates to: PHRHKETVEGIQVGV*TCSQKDFCAVDIII Trigger: AATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 90 bp | GGTATTTCAGAGCAAGATAATGTCCCTCATAGGCAGCTCGGTGTATaGGAAGATGCCCTGCTCTGTTGGGCACATTGCCGCTTCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GISEQDNVPHRQLGV*EDALLCWAHCRFLR Trigger: ACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCTATGAGGGACATTATCTTGCTCTGAAATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 90 bp | CTAACACGTCACAGTGGCCATACTCAGCAGCAACTCCTAAGGGTGTaGCTCCGAATCCGTCTCTCAAGTGGACGTTGCCTCTGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTRHSGHTQQQLLRV*LRIRLSSGRCLCDS Trigger: TGAATCACAGAGGCAACGTCCACTTGAGAGACGGATTCGGAGTCACACCCTTAGGAGTTGCTGCTGAGTATGGCCACTGTGACGTGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CCA 90 bp | TCCAAGTTGGGGTCTGCACCTGCAGCCAGAAGGACTTCTGTGCAGTaGATATCATTATTGGAGACGGCGAAGTATAGCGCAGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLGSAPAARRTSVQ*ISLLETAKYSAVFL Trigger: GAGAAAGACTGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAATTGAGGGGATCCAAGTaGGGGTCTGCACCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKVHSEVLCVDSVRNWELRGSK*GSAPAA Trigger: GGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAA...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS GCA 90 bp | AATAGCAGCGTGATAATATCTTTGCGACCTTGCTTAGCTGCCTCATaGATTGCTGACCATCGTTTGACACAGGGCTGGTCAAGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSSVIISLRPCLAAS*IADHRLTQGWSRLV Trigger: CACCAGCCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCAAGGTCGCAAAGATATTATCACGCTGCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATACAGTGCATATTTATATaGCACATACTCCTGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEPRSAGEAGLQGESACIQCIFI*HILLEL Trigger: GAGCTCCAGGAGTATGTGCAATATAAATATGCACTG...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCATCTCCATCACAGGTCTaGAACTCCCAGAGTGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSSPSQV*NSQSVL Trigger: TAAGACACTCTGGGAGTTCAAGACCTGTGATGGAGA...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTATCTCCTTTGTCATTTTaGGTGTTGGGCCAGACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVSPLSF*VLGQTP Trigger: AGGGGTCTGGCCCAACACCAAAAATGACAAAGGAGA...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAAGAGGTGTCTCTCCTTaGTCATTTTTGGTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSRGVSP*SFLVLG Trigger: GCCCAACACCAAAAATGACAAAGGAGAGACACCTCT...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAAAGTTCATTCTGAAGTGCTGTGTGTGGACTCTGTAAGGAACTGGGAAGCCACAAGGAGACAGTaGAGGGGATCCAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKVHSEVLCVDSVRNWEATRRQ*RGSKLG Trigger: CCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGC...TTCCCAGTTCCTTACAGAGTCCACACACAGCACTTCAGAATGAACTTTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS CCA 90 bp | TGCTTAGCTGCCTCATGCATTGCTGACCATCGTTTGACACAGGGCTaGTCAAGGCTGGTGTTGTATTTAATCAGTGCAGAGACCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLAASCIADHRLTQG*SRLVLYLISAETMS Trigger: TGACATGGTCTCTGCACTGATTAAATACAACACCAGCCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CCA 90 bp | CTGCACCTGCAGCCAGAAGGACTTCTGTGCAGTGGATATCATTATTaGAGACGGCGAAGTATAGCGCAGTCTTTCTCTCATCATCGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLQPEGLLCSGYHY*RRRSIAQSFSHHRN Trigger: GTTACGATGATGAGAGAAAGACTGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCCAAGGAGCGCTGGAGAGGCTGGCTTACAGGGTGAATCTGCATGCATATATCTGTTGAATGGGTaGAACTACAGCTTCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TEPRSAGEAGLQGESACIYLLNG*NYSFMQ Trigger: TTGCATGAAGCTGTAGTTCAACCCATTCAACAGATA...TATGCATGCAGATTCACCCTGTAAGCCAGCCTCTCCAGCGCTCCTTGGCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGGCCGCTTTTCTGAATaGCATGTTTGGATGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSGRFSE*HVWMLL Trigger: CAGTAACATCCAAACATGCAATTCAGAAAAGCGGCC...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS TCA 90 bp | CGTGATAATATCTTTGCGACCTTGCTTAGCTGCCTCATGCATTGCTaGCCATCGTTTGACACAGGGCTGGTCAAGGCTGGTGTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: RDNIFATLLSCLMHC*PSFDTGLVKAGVVF Trigger: AAATACAACACCAGCCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCAAGGTCGCAAAGATATTATCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS TCA 90 bp | AAGGGTGTGACTCCGAATCCGTCTCTCAAGTGGACGTTGCCTCTGTaGTTCAATAGCAGCGTGATAATATCTTTGCGACCTTGCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGVTPNPSLKWTLPL*FNSSVIISLRPCLA Trigger: AGCTAAGCAAGGTCGCAAAGATATTATCACGCTGCTATTGAATCACAGAGGCAACGTCCACTTGAGAGACGGATTCGGAGTCACACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS-3UTR CAA 90 bp | TCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAGATGTACGTCTCAAGTATCTGTaGAATGGGTTGAACTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKRHCIVSVGGRTQSDVRLKYL*NGLNYS Trigger: GCTGTAGTTCAACCCATTCAACAGATACTTGAGACG...TACATCTGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS GCA 90 bp | TCGTTTGACACAGGGCTGGTCAAGGCTGGTGTTGTATTTAATCAGTaGAGAGACCATGTCATAGGAGCCCCTCTTTATAGCAATCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFDTGLVKAGVVFNQ*RDHVIGAPLYSNQK Trigger: CTTCTGATTGCTATAAAGAGGGGCTCCTATGACATGGTCTCTGCACTGATTAAATACAACACCAGCCTTGACCAGCCCTGTGTCAAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAATTTGTGGGACTGAGCAGGAAACGGTGGATTTAAGAGAGAAACTCGGTGCACAGACTTCAGTTTaGCACACAGAGGGACGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGICGTEQETVDLREKLGAQTSV*HTEGRN Trigger: ATTACGTCCCTCTGTGTGCAAAACTGAAGTCTGTGC...ACCGAGTTTCTCTCTTAAATCCACCGTTTCCTGCTCAGTCCCACAAATTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTCGGGGAAGCGGCACTGTATTGTCTCAGTAGGAGGAAGAACACAGTCAAGGATTCTCTATTATTaGGCGTATTTCTGGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SKSGKRHCIVSVGGRTQSRILYY*AYFWPF Trigger: GAATGGCCAGAAATACGCCAAATAATAGAGAATCCT...TGACTGTGTTCTTCCTCCTACTGAGACAATACAGTGCCGCTTCCCCGACTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS GCA 90 bp | CAGTCTCTGACCACACAAATGAATTCCCAAAGATGTTTCCGTGCATaGAGTCAAAACATAGCTCCACTTGGTAACCATTATTCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSLTTQMNSQRCFRA*SQNIAPLGNHYSAG Trigger: TCCTGCTGAATAATGGTTACCAAGTGGAGCTATGTTTTGACTGCATGCACGGAAACATCTTTGGGAATTCATTTGTGTGGTCAGAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 90 bp | GTGTCTTATAGGATGCATCCAGAACCGTCTCAAGTATCTGTTGAATaGGTTGAACTACAGCTTCATGCAATGGGAACCATCCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSYRMHPEPSQVSVE*VELQLHAMGTILSH Trigger: ATGAGAAAGGATGGTTCCCATTGCATGAAGCTGTAGTTCAACCCATTCAACAGATACTTGAGACGGTTCTGGATGCATCCTATAAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACCTCTGGTCTTATAAAACCATAAAGTCTGGGAATTGCTGTAGAAGATGTTTGTCTAGCAACGTCTaGACATTTTCCACCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ENLWSYKTIKSGNCCRRCLSSNV*TFSTRP Trigger: TGGTCTGGTGGAAAATGTCAAGACGTTGCTAGACAA...ACATCTTCTACAGCAATTCCCAGACTTTATGGTTTTATAAGACCAGAGGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117688.2 |
||
| CDS CCA 72 bp | CATCGCCGCCGGGAGAGGAAGCATCTGTATGGAGGCTaGCTGGCAGAGTCGCTGCAGTCCCATAACTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HRRRERKHLYGG*LAESLQSHNSA Trigger: CGCCGAGTTATGGGACTGCAGCGACTCTGCCAGCCAGCCTCCATACAGATGCTTCCTCTCCCGGCGGCGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CCA 72 bp | GCCGCCGGGAGAGGAAGCATCTGTATGGAGGCTGGCTaGCAGAGTCGCTGCAGTCCCATAACTCGGCGAATT | + |
|
Preference number: 6 (lower is better) Translates to: AAGRGSICMEAG*QSRCSPITRRI Trigger: AATTCGCCGAGTTATGGGACTGCAGCGACTCTGCCAGCCAGCCTCCATACAGATGCTTCCTCTCCCGGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS TCA 72 bp | CATGTCGATTGGCCCTCACCGCCACAAGGAGACAGTTaGGGGGATCCAAGTTGGGGTCTGCACCTGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HVDWPSPPQGDS*GDPSWGLHLQP Trigger: TGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGGGCCAATCGACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | TCATGTCGATTGGCCCTCACCGCCACAAGGAGACAGTaGAGGGGATCCAAGTTGGGGTCTGCACCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCRLALTATRRQ*RGSKLGSAPAA Trigger: GGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGGGCCAATCGACATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 90 bp | CGATTGGCCCTCACCGCCACAAGGAGACAGTTGAGGGGATCCAAGTaGGGGTCTGCACCTGCAGCCAGAAGGACTTCTGTGCAGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RLALTATRRQLRGSK*GSAPAARRTSVQWI Trigger: TATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGGGCCAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CAA 90 bp | CGGACGATTTCATGTCGATTGGCCCTCACCGCCACAAGGAGACAGTaGAGGGGATCCAAGTTGGGGTCTGCACCTGCAGCCAGAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RTISCRLALTATRRQ*RGSKLGSAPAARRT Trigger: AGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAGGGCCAATCGACATGAAATCGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | GGTGTATGGGAAGATGCCCTGCTCTGTTGGGCACATTaGCGCTTCCTCCGTACTTCAGCAGGAGGGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GVWEDALLCWAH*RFLRTSAGGRC Trigger: GCATCTCCCTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 72 bp | AGGCAGCTCGGTGTATGGGAAGATGCCCTGCTCTGTTaGGCACATTGCCGCTTCCTCCGTACTTCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RQLGVWEDALLC*AHCRFLRTSAG Trigger: TCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | CGGTGTATGGGAAGATGCCCTGCTCTGTTGGGCACATaGCCGCTTCCTCCGTACTTCAGCAGGAGGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RCMGRCPALLGT*PLPPYFSRREM Trigger: CATCTCCCTCCTGCTGAAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | CTCACCGCCACAAGGAGACAGTTGAGGGGATCCAAGTaGGGGTCTGCACCTGCAGCCAGAAGGACTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTATRRQLRGSK*GSAPAARRTSV Trigger: CACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTGGCGGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | TCCCTCATAGGCAGCTCGGTGTATGGGAAGATGCCCTaGTCTGTTGGGCACATTGCCGCTTCCTCCGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: SLIGSSVYGKMP*SVGHIAASSVL Trigger: AAGTACGGAGGAAGCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCTATGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 72 bp | CACAGTGGCCATACTCAGCAGCAACTCCTAAGGGTGTaGCTCCGAATCCGTCTCTCAAGTGGACGTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSGHTQQQLLRV*LRIRLSSGRCL Trigger: GAGGCAACGTCCACTTGAGAGACGGATTCGGAGTCACACCCTTAGGAGTTGCTGCTGAGTATGGCCACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | CACAAGGAGACAGTTGAGGGGATCCAAGTTGGGGTCTaGACCTGCAGCCAGAAGGACTTCTGTGCAGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HKETVEGIQVGV*TCSQKDFCAVD Trigger: ATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTCCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 72 bp | GAGCAAGATAATGTCCCTCATAGGCAGCTCGGTGTATaGGAAGATGCCCTGCTCTGTTGGGCACATTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EQDNVPHRQLGV*EDALLCWAHCR Trigger: GCGGCAATGTGCCCAACAGAGCAGGGCATCTTCCCATACACCGAGCTGCCTATGAGGGACATTATCTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 72 bp | ATCTTTGCGACCTTGCTTAGCTGCCTCATGCATTGCTaGCCATCGTTTGACACAGGGCTGGTCAAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: IFATLLSCLMHC*PSFDTGLVKAG Trigger: ACCAGCCTTGACCAGCCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCAAGGTCGCAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | GAGACAGTTGAGGGGATCCAAGTTGGGGTCTGCACCTaGAGCCAGAAGGACTTCTGTGCAGTGGATATCATT | + |
|
Preference number: 6 (lower is better) Translates to: ETVEGIQVGVCT*SQKDFCAVDII Trigger: AATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACTTGGATCCCCTCAACTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | CACACAGAGGGACGTAATCCATGTAATCTATCAGTATaGGGACAATGCCGCCCACCAGGTGCTTCATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: HTEGRNPCNLSV*GQCRPPGASST Trigger: CGTGGATGAAGCACCTGGTGGGCGGCATTGTCCGCATACTGATAGATTACATGGATTACGTCCCTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 72 bp | GGGTCTGCACCTGCAGCCAGAAGGACTTCTGTGCAGTaGATATCATTATTGGAGACGGCGAAGTATAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSAPAARRTSVQ*ISLLETAKYSA Trigger: TGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | TTGGTGTTGGGCCAGACCCCTTTGTCTAGCAACGTCTaGACATTTTCCACCAGACCAGCTTTGACTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVLGQTPLSSNV*TFSTRPALTAR Trigger: CCTGGCAGTCAAAGCTGGTCTGGTGGAAAATGTCAAGACGTTGCTAGACAAAGGGGTCTGGCCCAACACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 90 bp | ACCCCTTTGTCTAGCAACGTCTTGACATTTTCCACCAGACCAGCTTaGACTGCCAGGGTCAAGGGTGTTTCTCCATCACAGGTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TPLSSNVLTFSTRPA*TARVKGVSPSQVLN Trigger: GTTCAAGACCTGTGATGGAGAAACACCCTTGACCCTGGCAGTCAAAGCTGGTCTGGTGGAAAATGTCAAGACGTTGCTAGACAAAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 72 bp | CTGCCAGGGTCAAGGGTGTTTCTCCATCACAGGTCTTaGACTCCCAGAGTGTCTTATAGGATGCATCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPGSRVFLHHRS*TPRVSYRMHPE Trigger: TTCTGGATGCATCCTATAAGACACTCTGGGAGTTCAAGACCTGTGATGGAGAAACACCCTTGACCCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | CAACGTCTTGACATTTTCCACCAGACCAGCTTTGACTaGCAGGGTCAAGGGTGTTTCTCCATCACAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRLDIFHQTSFD*QGQGCFSITGL Trigger: AAGACCTGTGATGGAGAAACACCCTTGACCCTGGCAGTCAAAGCTGGTCTGGTGGAAAATGTCAAGACGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | AGTTGGGGTCTGCACCTGCAGCCAGAAGGACTTCTGTaGAGTGGATATCATTATTGGAGACGGCGAAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: SWGLHLQPEGLL*SGYHYWRRRSI Trigger: TATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGCAGGTGCAGACCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | TCTAGCAACGTCTTGACATTTTCCACCAGACCAGCTTaGACTGCCAGGGTCAAGGGTGTTTCTCCATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSNVLTFSTRPA*TARVKGVSPSQ Trigger: CTGTGATGGAGAAACACCCTTGACCCTGGCAGTCAAAGCTGGTCTGGTGGAAAATGTCAAGACGTTGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 72 bp | GGGCGTTTTGTCCCTCTGCTGCTGAGTGAATTGGAGTaGGGCCGCTTTTCTGAATTGCATGTTTGGATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GRFVPLLLSELE*GRFSELHVWML Trigger: TAACATCCAAACATGCAATTCAGAAAAGCGGCCTCACTCCAATTCACTCAGCAGCAGAGGGACAAAACGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS TCA 72 bp | AGGAGCCTCAGCATAATCTCATCATTTAGGGCATACTaGATGGCACTGGGGAAGCGAGTGTCATTCACATGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLSIISSFRAY*MALGKRVSFTC Trigger: GCATGTGAATGACACTCGCTTCCCCAGTGCCATTCAGTATGCCCTAAATGATGAGATTATGCTGAGGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | ACAGGGCTGGTCAAGGCTGGTGTTGTATTTAATCAGTaGAGAGACCATGTCATAGGAGCCCCTCTTTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGLVKAGVVFNQ*RDHVIGAPLYS Trigger: GCTATAAAGAGGGGCTCCTATGACATGGTCTCTGCACTGATTAAATACAACACCAGCCTTGACCAGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | GTGATAATATCTTTGCGACCTTGCTTAGCTGCCTCATaGATTGCTGACCATCGTTTGACACAGGGCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VIISLRPCLAAS*IADHRLTQGWS Trigger: TGACCAGCCCTGTGTCAAACGATGGTCAGCAATGCATGAGGCAGCTAAGCAAGGTCGCAAAGATATTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CAA 72 bp | GCAGCCAGAAGGACTTCTGTGCAGTGGATATCATTATaGGAGACGGCGAAGTATAGCGCAGTCTTTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AARRTSVQWISL*ETAKYSAVFLS Trigger: TGAGAGAAAGACTGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS TCA 72 bp | ACTCCGAATCCGTCTCTCAAGTGGACGTTGCCTCTGTaGTTCAATAGCAGCGTGATAATATCTTTGCGACCT | + |
|
Preference number: 6 (lower is better) Translates to: TPNPSLKWTLPL*FNSSVIISLRP Trigger: AGGTCGCAAAGATATTATCACGCTGCTATTGAATCACAGAGGCAACGTCCACTTGAGAGACGGATTCGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CCA 72 bp | CAGCCAGAAGGACTTCTGTGCAGTGGATATCATTATTaGAGACGGCGAAGTATAGCGCAGTCTTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPEGLLCSGYHY*RRRSIAQSFSH Trigger: ATGAGAGAAAGACTGCGCTATACTTCGCCGTCTCCAATAATGATATCCACTGCACAGAAGTCCTTCTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CAA 72 bp | ATCAGAAGAGGTGTCTCTCCTTTGTCATTTTTGGTGTaGGGCCAGACCCCTTTGTCTAGCAACGTCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: IRRGVSPLSFLV*GQTPLSSNVLT Trigger: TGTCAAGACGTTGCTAGACAAAGGGGTCTGGCCCAACACCAAAAATGACAAAGGAGAGACACCTCTTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CAA 72 bp | ATAGCAATCAGAAGAGGTGTCTCTCCTTTGTCATTTTaGGTGTTGGGCCAGACCCCTTTGTCTAGCAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: IAIRRGVSPLSF*VLGQTPLSSNV Trigger: GACGTTGCTAGACAAAGGGGTCTGGCCCAACACCAAAAATGACAAAGGAGAGACACCTCTTCTGATTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CCA 72 bp | AGGATGCATCCAGAACCGTCTCAAGTATCTGTTGAATaGGTTGAACTACAGCTTCATGCAATGGGAACCATC | + |
|
Preference number: 6 (lower is better) Translates to: RMHPEPSQVSVE*VELQLHAMGTI Trigger: GATGGTTCCCATTGCATGAAGCTGTAGTTCAACCCATTCAACAGATACTTGAGACGGTTCTGGATGCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
||
| CDS CAA 90 bp | CTTATAGGATGCATCCAGAACCGTCTCAAGTATCTGTTGAATGGGTaGAACTACAGCTTCATGCAATGGGAACCATCCTTTCTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LIGCIQNRLKYLLNG*NYSFMQWEPSFLIC Trigger: GCAGATGAGAAAGGATGGTTCCCATTGCATGAAGCTGTAGTTCAACCCATTCAACAGATACTTGAGACGGTTCTGGATGCATCCTATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | TGCATCCAGAACCGTCTCAAGTATCTGTTGAATGGGTaGAACTACAGCTTCATGCAATGGGAACCATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CIQNRLKYLLNG*NYSFMQWEPSF Trigger: AAAGGATGGTTCCCATTGCATGAAGCTGTAGTTCAACCCATTCAACAGATACTTGAGACGGTTCTGGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 90 bp | GTATTTCTGGCCATTCTCTCTGTACTTCTAGCACAGACTTCAGTTTaGCACACAGAGGGACGTAATCCATGTAATCTATCAGTATGCGGA | + |
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Preference number: 6 (lower is better) Translates to: VFLAILSVLLAQTSV*HTEGRNPCNLSVCG Trigger: TCCGCATACTGATAGATTACATGGATTACGTCCCTCTGTGTGCAAAACTGAAGTCTGTGCTAGAAGTACAGAGAGAATGGCCAGAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | CCTTTCTCATCTGCTTCTTCCAGTGCATATTTATATTaGACATACTCCTGGAGCTCAAAAATGCGACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PFSSASSSAYLY*TYSWSSKMRPC Trigger: GCAAGGTCGCATTTTTGAGCTCCAGGAGTATGTGCAATATAAATATGCACTGGAAGAAGCAGATGAGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CCA 72 bp | GAGGCCGCTTTTCTGAATTGCATGTTTGGATGTTACTaGGATAAGGTATTTCAGAGCAAGATAATGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: EAAFLNCMFGCY*DKVFQSKIMSL Trigger: GAGGGACATTATCTTGCTCTGAAATACCTTATCCCAGTAACATCCAAACATGCAATTCAGAAAAGCGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS CAA 72 bp | TCCTTTCTCATCTGCTTCTTCCAGTGCATATTTATATaGCACATACTCCTGGAGCTCAAAAATGCGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFLICFFQCIFI*HILLELKNATL Trigger: CAAGGTCGCATTTTTGAGCTCCAGGAGTATGTGCAATATAAATATGCACTGGAAGAAGCAGATGAGAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | ACCACACAAATGAATTCCCAAAGATGTTTCCGTGCATaGAGTCAAAACATAGCTCCACTTGGTAACCATTAT | + |
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Preference number: 6 (lower is better) Translates to: TTQMNSQRCFRA*SQNIAPLGNHY Trigger: ATAATGGTTACCAAGTGGAGCTATGTTTTGACTGCATGCACGGAAACATCTTTGGGAATTCATTTGTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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| CDS GCA 72 bp | AATGGATTCCTGAATACAGAGCTGGATGTCATAACTTaGAAGATGGTCATCGTTAGAATCATCATTAATATC | + |
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Preference number: 6 (lower is better) Translates to: NGFLNTELDVIT*KMVIVRIIINI Trigger: GATATTAATGATGATTCTAACGATGACCATCTTGCAAGTTATGACATCCAGCTCTGTATTCAGGAATCCATT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031696.10 ENSMUST00000117688.2 |
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