Pregenerated sensors for ASB13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033781Ensembl transcript IDs: ENSMUST00000042288.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGTGTGTGCGCGCGCGCGCGCTTGCACACTCATGCAGTGCACATaGATGCAGTGGGGTGGTGATAAGCCTAAAGTGCCCTTCATGCAT | + |
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Preference number: 1 (lower is better) Translates to: CVCARARACTLMQCT*MQWGGDKPKVPFMH Trigger: ATGCATGAAGGGCACTTTAGGCTTATCACCACCCCACTGCATGCATGTGCACTGCATGAGTGTGCAAGCGCGCGCGCGCGCACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 90 bp | TCGGATCTGGCTGGCATGGCCTGGATCAGTGGCAACTCTCTTTCCTaGTTTCCATCCTCTGGAGAGGAACCACAGCGGAGCAGGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: SDLAGMAWISGNSLS*FPSSGEEPQRSRLV Trigger: GACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGCCAGATCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | TTTCCATCCTCTGGAGAGGAACCACAGCGGAGCAGGCTTGTCCTCTaGCAGGTGTCCGCGTGGAGTCCGTGTGAATTATCTCTTGGCACG | + |
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Preference number: 1 (lower is better) Translates to: FPSSGEEPQRSRLVL*QVSAWSPCELSLGT Trigger: CGTGCCAAGAGATAATTCACACGGACTCCACGCGGACACCTGCCAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | CATGGCCTGGATCAGTGGCAACTCTCTTTCCTGCTTTCCATCCTCTaGAGAGGAACCACAGCGGAGCAGGCTTGTCCTCTGGCAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: HGLDQWQLSFLLSIL*RGTTAEQACPLAGV Trigger: GACACCTGCCAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | AGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATaGCACGATGCCAGCAGAGTAGTGTCCCAGTCCACAGGGTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: RPWKVPAAAPEKPSK*HDASRVVSQSTGSS Trigger: ACTTGACCCTGTGGACTGGGACACTACTCTGCTGGCATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | ACTCTTCACTACCCTTTCGGATCTGGCTGGCATGGCCTGGATCAGTaGCAACTCTCTTTCCTGCTTTCCATCCTCTGGAGAGGAACCACA | + |
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Preference number: 1 (lower is better) Translates to: TLHYPFGSGWHGLDQ*QLSFLLSILWRGTT Trigger: TGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGCCAGATCCGAAAGGGTAGTGAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | ACTCACACACTCTTCACTACCCTTTCGGATCTGGCTGGCATGGCCTaGATCAGTGGCAACTCTCTTTCCTGCTTTCCATCCTCTGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: THTLFTTLSDLAGMA*ISGNSLSCFPSSGE Trigger: CTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGCCAGATCCGAAAGGGTAGTGAAGAGTGTGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | CGTTCACTCACACACTCTTCACTACCCTTTCGGATCTGGCTGGCATaGCCTGGATCAGTGGCAACTCTCTTTCCTGCTTTCCATCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RSLTHSSLPFRIWLA*PGSVATLFPAFHPL Trigger: CAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGCCAGATCCGAAAGGGTAGTGAAGAGTGTGTGAGTGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 90 bp | CAGGAGACTAGCAAGGGTTACATCCACAACTGTGATGCCAGACACTaGCCTTCTGGGGCTTCAGAGATCTTCTCTGGGTTCAGAAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QETSKGYIHNCDARH*PSGASEIFSGFRRR Trigger: TCTTCTTCTGAACCCAGAGAAGATCTCTGAAGCCCCAGAAGGCCAGTGTCTGGCATCACAGTTGTGGATGTAACCCTTGCTAGTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR TCA 90 bp | TGGCCGGTGAAAAGAGAAACACAGAGAACTGAGCCTGTCCTAGAATaGCTACATTTGTTCCAGGAGACTAGCAAGGGTTACATCCACAAC | + |
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Preference number: 1 (lower is better) Translates to: WPVKRETQRTEPVLE*LHLFQETSKGYIHN Trigger: GTTGTGGATGTAACCCTTGCTAGTCTCCTGGAACAAATGTAGTCATTCTAGGACAGGCTCAGTTCTCTGTGTTTCTCTTTTCACCGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 90 bp | AAGATCTGCAAACATCAACACGACCAGAGAGCAATTACAACCGTATaGCTTTCATGCATGAGGAGCACTCTGACCTTATCAAAGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KICKHQHDQRAITTV*LSCMRSTLTLSKQP Trigger: AGGCTGCTTTGATAAGGTCAGAGTGCTCCTCATGCATGAAAGGCATACGGTTGTAATTGCTCTCTGGTCGTGTTGATGTTTGCAGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 90 bp | AAACATCAACACGACCAGAGAGCAATTACAACCGTATGCCTTTCATaGATGAGGAGCACTCTGACCTTATCAAAGCAGCCTTTAATCACC | + |
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Preference number: 1 (lower is better) Translates to: KHQHDQRAITTVCLS*MRSTLTLSKQPLIT Trigger: GGTGATTAAAGGCTGCTTTGATAAGGTCAGAGTGCTCCTCATGCATGAAAGGCATACGGTTGTAATTGCTCTCTGGTCGTGTTGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 90 bp | ACCCTCCCAAGGTCTGAAGAGAATGATTTATACAGGTGTAAGATCTaGAAACATCAACACGACCAGAGAGCAATTACAACCGTATGCCTT | + |
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Preference number: 1 (lower is better) Translates to: TLPRSEENDLYRCKI*KHQHDQRAITTVCL Trigger: AAGGCATACGGTTGTAATTGCTCTCTGGTCGTGTTGATGTTTGCAGATCTTACACCTGTATAAATCATTCTCTTCAGACCTTGGGAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR TCA 90 bp | GTGATAAGCCTAAAGTGCCCTTCATGCATGGAAGGCATATGGTTATaGTTGCTCTCTGGTTTTGTTCACATTTGCAGATCTTACACCTGT | + |
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Preference number: 1 (lower is better) Translates to: VISLKCPSCMEGIWL*LLSGFVHICRSYTC Trigger: ACAGGTGTAAGATCTGCAAATGTGAACAAAACCAGAGAGCAATCATAACCATATGCCTTCCATGCATGAAGGGCACTTTAGGCTTATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR TCA 90 bp | TCTGGGTTCAGAAGAAGACATCAAAAAGGACAACCAGAAGGAACATaGAGGAGCATCAACCAATCTACAGCAATGTTAGTGTTTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SGFRRRHQKGQPEGT*RSINQSTAMLVFQR Trigger: TCTCTGAAACACTAACATTGCTGTAGATTGGTTGATGCTCCTTCATGTTCCTTCTGGTTGTCCTTTTTGATGTCTTCTTCTGAACCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR TCA 90 bp | CCCACAATGTACAGGACTCATTGTTATTACTATAGGAAGAAATTGTaGCCCCTTTTTCTGCTTTGGCTAAAGAATCTCATTCCCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: PTMYRTHCYYYRKKL*PLFLLWLKNLIPIW Trigger: CCAGATGGGAATGAGATTCTTTAGCCAAAGCAGAAAAAGGGGTCACAATTTCTTCCTATAGTAATAACAATGAGTCCTGTACATTGTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CAA 90 bp | TTTCCTGCTTTCCATCCTCTGGAGAGGAACCACAGCGGAGCAGGCTaGTCCTCTGGCAGGTGTCCGCGTGGAGTCCGTGTGAATTATCTC | + |
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Preference number: 2 (lower is better) Translates to: FPAFHPLERNHSGAG*SSGRCPRGVRVNYL Trigger: GAGATAATTCACACGGACTCCACGCGGACACCTGCCAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CAA 90 bp | TTGTCCTCTGGCAGGTGTCCGCGTGGAGTCCGTGTGAATTATCTCTaGGCACGATGTTTCTCTGTTGGGCCCTGGGATATGAGCGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LSSGRCPRGVRVNYL*ARCFSVGPWDMSEL Trigger: CAACTCGCTCATATCCCAGGGCCCAACAGAGAAACATCGTGCCAAGAGATAATTCACACGGACTCCACGCGGACACCTGCCAGAGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACAAGCAAGGTGATAACTaGGCCAGCCATCAGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GRPWKVPAAAPEKPSKWHKQGDN*ASHQPF Trigger: GAAAGGCTGATGGCTGGCCCAGTTATCACCTTGCTT...GTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATAGGTACAGGTAGACCTTaGAAAGTGCCAGCTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LGRVSYISGGTPHRGVCIGTGRP*KVPAAA Trigger: GGCAGCAGCTGGCACTTTCCAAGGTCTACCTGTACC...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CGCACACACACGCTATGGCTTGGTTTTCATAGCTATCTGGGGTCACAGGCAGCGCAGATGGGCTGTTATTaGGTTTTATTGCTAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RTHTLWLGFHSYLGSQAAQMGCY*VLLLEA Trigger: TGCCTCTAGCAATAAAACCCAATAACAGCCCATCTG...CGCTGCCTGTGACCCCAGATAGCTATGAAAACCAAGCCATAGCGTGTGTGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATACTGACAGAAGGAAGGTaGCTTTTCTCAGTAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LGRVSYISGGTPHRGVCILTEGR*LFSVEN Trigger: ATTCTCTACTGAGAAAAGCCACCTTCCTTCTGTCAG...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCACACAGTATGAAGCCTGTCCTGGCATAACTGTCCCCAAAAATAAGACAGAAAAACCATCCAAATaGCACGATGCCAGCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: HLTQYEACPGITVPKNKTEKPSK*HDASRV Trigger: TACTCTGCTGGCATCGTGCCATTTGGATGGTTTTTC...TGTCTTATTTTTGGGGACAGTTATGCCAGGACAGGCTTCATACTGTGTGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CAA 90 bp | CACATTTGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTaGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HICRSYTCINYSLQT*GGYHIFQGVHHTEG Trigger: CCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR TCA 90 bp | ATTACAACTAGGGCATTTCATACATTACTTCATGGGCTTTCCTTACCATCCGCATTTGAGGGTGGCCGGTaGAAAGAGAAACACAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ITTRAFHTLLHGLSLPSAFEGGR*KEKHRE Trigger: TTCTCTGTGTTTCTCTTTTCACCGGCCACCCTCAAA...TGCGGATGGTAAGGAAAGCCCATGAAGTAATGTATGAAATGCCCTAGTTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CAA 90 bp | AACTGCTATTACTATTCCATGCAAAAACATGGATTTCCTCAGAACTaGTACCAGAGACTGACAGAAGGAAGGTGGCTTTTCTCAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: NCYYYSMQKHGFPQN*YQRLTEGRWLFSVE Trigger: CTCTACTGAGAAAAGCCACCTTCCTTCTGTCAGTCTCTGGTACAAGTTCTGAGGAAATCCATGTTTTTGCATGGAATAGTAATAGCAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATCTCTTTGAGTTCAAAGCCAGCCCGGTTTAAAGTGAGTTCCAGGACATCTAATCTCATTCCCATCTaGATAAAGTTTTGCACTTTC | + |
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Preference number: 2 (lower is better) Translates to: QISLSSKPARFKVSSRTSNLIPI*IKFCTF Trigger: GAAAGTGCAAAACTTTATCCAGATGGGAATGAGATT...AGATGTCCTGGAACTCACTTTAAACCGGGCTGGCTTTGAACTCAAAGAGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | CACATTTGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTTGGGAGGGCCCCTTTTTCTGCTTTaGCTAAAGAATCTCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: HICRSYTCINYSLQTLGGPLFLL*LKNLIP Trigger: GGGAATGAGATTCTTTAGCCAAAGCAGAAAAAGGGG...CCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CCA 90 bp | ATTACAACTAGGGCATTTCATACATTACTTCATGGGCTTTCCTTACCATCCGCATTCAGAGATCTTCTCTaGGTTCAGAAGAAGACATCA | + |
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Preference number: 2 (lower is better) Translates to: ITTRAFHTLLHGLSLPSAFRDLL*VQKKTS Trigger: TGATGTCTTCTTCTGAACCCAGAGAAGATCTCTGAA...TGCGGATGGTAAGGAAAGCCCATGAAGTAATGTATGAAATGCCCTAGTTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CAA 90 bp | CATGGAAGGCATATGGTTATGATTGCTCTCTGGTTTTGTTCACATTaGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HGRHMVMIALWFCSH*QILHLYKLFSSDLG Trigger: CCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATGTGAACAAAACCAGAGAGCAATCATAACCATATGCCTTCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR GCA 90 bp | ATTACAACTAGGGCATTTCATACATTACTTCATGGGCTTTCCTTACCATCCGCAGCATATGGTTATGATTaGTCTCTGGTTTTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: ITTRAFHTLLHGLSLPSAAYGYD*SLVLFT Trigger: TGTGAACAAAACCAGAGAGCAATCATAACCATATGC...TGCGGATGGTAAGGAAAGCCCATGAAGTAATGTATGAAATGCCCTAGTTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | GCGCGCGCGCGCGCTTGCACACTCATGCAGTGCACATaGATGCAGTGGGGTGGTGATAAGCCTAAAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: ARARACTLMQCT*MQWGGDKPKVP Trigger: GGGCACTTTAGGCTTATCACCACCCCACTGCATGCATGTGCACTGCATGAGTGTGCAAGCGCGCGCGCGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCTTaGACACTCATGCAGTGCACATGCATGCAGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCARARA*TLMQCTCMQWG Trigger: ACCCCACTGCATGCATGTGCACTGCATGAGTGTGCAAGCGCGCGCGCGCGCACACACACACACACACACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CAA 90 bp | CGCACACACACGCTATGGCTTGGTTTTCATAGCTATCTGGGGTCACAGGCAGCGGGCCAGAAGAGGGTGTaGGATCCCCTGGAGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RTHTLWLGFHSYLGSQAAGQKRV*DPLELK Trigger: CTTCAGCTCCAGGGGATCCAACACCCTCTTCTGGCC...CGCTGCCTGTGACCCCAGATAGCTATGAAAACCAAGCCATAGCGTGTGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | GCTGGCATGGCCTGGATCAGTGGCAACTCTCTTTCCTaGTTTCCATCCTCTGGAGAGGAACCACAGCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AGMAWISGNSLS*FPSSGEEPQRS Trigger: GCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | TCTGGAGAGGAACCACAGCGGAGCAGGCTTGTCCTCTaGCAGGTGTCCGCGTGGAGTCCGTGTGAATTATCT | + |
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Preference number: 3 (lower is better) Translates to: SGEEPQRSRLVL*QVSAWSPCELS Trigger: AGATAATTCACACGGACTCCACGCGGACACCTGCCAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | TCCTTACCATCCGCACGCGCGCGCACACACACGCTATaGCTTGGTTTTCATAGCTATCTGGGGTCACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SLPSARARTHTL*LGFHSYLGSQA Trigger: TGCCTGTGACCCCAGATAGCTATGAAAACCAAGCCATAGCGTGTGTGTGCGCGCGCGTGCGGATGGTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | TGCCAGCAGAGTAGTGTCCCAGTCCACAGGGTCAAGTaGTTAGAACCTGATGCTTCTGTGGCATGGCACCCA | + |
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Preference number: 3 (lower is better) Translates to: CQQSSVPVHRVK*LEPDASVAWHP Trigger: TGGGTGCCATGCCACAGAAGCATCAGGTTCTAAGCACTTGACCCTGTGGACTGGGACACTACTCTGCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | AGCTGCTGCCCCAGAAAAACCATCCAAATGGCACGATaGCAGCAGAGTAGTGTCCCAGTCCACAGGGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: SCCPRKTIQMAR*QQSSVPVHRVK Trigger: CTTGACCCTGTGGACTGGGACACTACTCTGCTGGCATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | GATCAGTGGCAACTCTCTTTCCTGCTTTCCATCCTCTaGAGAGGAACCACAGCGGAGCAGGCTTGTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: DQWQLSFLLSIL*RGTTAEQACPL Trigger: CAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | AAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATaGCACGATGCCAGCAGAGTAGTGTCCCAGTCCACA | + |
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Preference number: 3 (lower is better) Translates to: KVPAAAPEKPSK*HDASRVVSQST Trigger: TGTGGACTGGGACACTACTCTGCTGGCATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | CGCGCTTGCACACTCATGCAGTGCACATGCATGCAGTaGGGTGGTGATAAGCCTAAAGTGCCCTTCATGCAT | + |
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Preference number: 3 (lower is better) Translates to: RACTLMQCTCMQ*GGDKPKVPFMH Trigger: ATGCATGAAGGGCACTTTAGGCTTATCACCACCCCACTGCATGCATGTGCACTGCATGAGTGTGCAAGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | TACCCTTTCGGATCTGGCTGGCATGGCCTGGATCAGTaGCAACTCTCTTTCCTGCTTTCCATCCTCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: YPFGSGWHGLDQ*QLSFLLSILWR Trigger: TCTCCAGAGGATGGAAAGCAGGAAAGAGAGTTGCCACTGATCCAGGCCATGCCAGCCAGATCCGAAAGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | AGCAAGGGTTACATCCACAACTGTGATGCCAGACACTaGCCTTCTGGGGCTTCAGAGATCTTCTCTGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SKGYIHNCDARH*PSGASEIFSGF Trigger: GAACCCAGAGAAGATCTCTGAAGCCCCAGAAGGCCAGTGTCTGGCATCACAGTTGTGGATGTAACCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR CCA 72 bp | CCGTGTGAATTATCTCTTGGCACGATGTTTCTCTGTTaGGCCCTGGGATATGAGCGAGTTGCTGTGCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: PCELSLGTMFLC*ALGYERVAVLD Trigger: GTCTAGCACAGCAACTCGCTCATATCCCAGGGCCCAACAGAGAAACATCGTGCCAAGAGATAATTCACACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | TTAATAATGGACATAGGAGCCAGGTGTTGTAGTGTATaGTTTAATCCCAGCACTCAGGAGACAGAGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LIMDIGARCCSV*FNPSTQETEAG Trigger: GCCTGCCTCTGTCTCCTGAGTGCTGGGATTAAAGCATACACTACAACACCTGGCTCCTATGTCCATTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATATGTTATTGGGTTTTATaGCTAGAGGCAAGATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LGRVSYISGGTPHRGVCICYWVL*LEARFC Trigger: ACAGAATCTTGCCTCTAGCAATAAAACCCAATAACA...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| 3UTR GCA 72 bp | AAACATCAACACGACCAGAGAGCAATTACAACCGTATaGCTTTCATGCATGAGGAGCACTCTGACCTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: KHQHDQRAITTV*LSCMRSTLTLS Trigger: TGATAAGGTCAGAGTGCTCCTCATGCATGAAAGGCATACGGTTGTAATTGCTCTCTGGTCGTGTTGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CCA 72 bp | AGACCCTATCTCAAAAGAAGAAAGGAAAAGCAAGAGTaGACAAGGACCCAAATCCTAGTCATCAGGTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: RPYLKRRKEKQE*TRTQILVIRCL Trigger: TAGGCACCTGATGACTAGGATTTGGGTCCTTGTCCACTCTTGCTTTTCCTTTCTTCTTTTGAGATAGGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | AAAAGAGAAACACAGAGAACTGAGCCTGTCCTAGAATaGCTACATTTGTTCCAGGAGACTAGCAAGGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: KRETQRTEPVLE*LHLFQETSKGY Trigger: GTAACCCTTGCTAGTCTCCTGGAACAAATGTAGTCATTCTAGGACAGGCTCAGTTCTCTGTGTTTCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATTTGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTTGGGAGGGGGATTTCCTCAGAACTaGTACCAGAGACTGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HICRSYTCINYSLQTLGGGFPQN*YQRLTE Trigger: TTCTGTCAGTCTCTGGTACAAGTTCTGAGGAAATCC...CCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | CTAAAGTGCCCTTCATGCATGGAAGGCATATGGTTATaGTTGCTCTCTGGTTTTGTTCACATTTGCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LKCPSCMEGIWL*LLSGFVHICRS Trigger: AGATCTGCAAATGTGAACAAAACCAGAGAGCAATCATAACCATATGCCTTCCATGCATGAAGGGCACTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR GCA 72 bp | AGTGCCCTTCATGCATGGAAGGCATATGGTTATGATTaGTCTCTGGTTTTGTTCACATTTGCAGATCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SALHAWKAYGYD*SLVLFTFADLT Trigger: TGTAAGATCTGCAAATGTGAACAAAACCAGAGAGCAATCATAACCATATGCCTTCCATGCATGAAGGGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | AGAAGAAGACATCAAAAAGGACAACCAGAAGGAACATaGAGGAGCATCAACCAATCTACAGCAATGTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RRRHQKGQPEGT*RSINQSTAMLV Trigger: CACTAACATTGCTGTAGATTGGTTGATGCTCCTTCATGTTCCTTCTGGTTGTCCTTTTTGATGTCTTCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CCA 72 bp | TTCATGCATGGAAGGCATATGGTTATGATTGCTCTCTaGTTTTGTTCACATTTGCAGATCTTACACCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FMHGRHMVMIAL*FCSHLQILHLY Trigger: ATACAGGTGTAAGATCTGCAAATGTGAACAAAACCAGAGAGCAATCATAACCATATGCCTTCCATGCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | ACTGACAGAAGGAAGGTGGCTTTTCTCAGTAGAGAATaGCTACTGGAAAATTCTCTAATTCTTTCTATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TDRRKVAFLSRE*LLENSLILSIV Trigger: TACAATAGAAAGAATTAGAGAATTTTCCAGTAGTCATTCTCTACTGAGAAAAGCCACCTTCCTTCTGTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | CAAATGTCTTCTCCAAACTGTCAACAGAACTTGAATTaGGTTTCAAGATATCAACAGTACCCCTATGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: QMSSPNCQQNLN*VSRYQQYPYEI Trigger: TATTTCATAGGGGTACTGTTGATATCTTGAAACTCAATTCAAGTTCTGTTGACAGTTTGGAGAAGACATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR TCA 72 bp | TATTACAAATGTCTTCTCCAAACTGTCAACAGAACTTaGATTGAGTTTCAAGATATCAACAGTACCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: YYKCLLQTVNRT*IEFQDINSTPM Trigger: CATAGGGGTACTGTTGATATCTTGAAACTCAATTCAAGTTCTGTTGACAGTTTGGAGAAGACATTTGTAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCTaGCACACTCATGCAGTGCACATGCATGCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCARAR*HTHAVHMHAVG Trigger: CCCCACTGCATGCATGTGCACTGCATGAGTGTGCAAGCGCGCGCGCGCGCACACACACACACACACACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | TTCCATCCTCTGGAGAGGAACCACAGCGGAGCAGGCTaGTCCTCTGGCAGGTGTCCGCGTGGAGTCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHPLERNHSGAG*SSGRCPRGVRV Trigger: CACACGGACTCCACGCGGACACCTGCCAGAGGACAAGCCTGCTCCGCTGTGGTTCCTCTCCAGAGGATGGAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | CGCACACACACGCTATGGCTTGGTTTTCATAGCTATCTGGGGTCACAGGCAGCGTGGCCGGGGCGCTGCTaGTCCACGTGTAGTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTHTLWLGFHSYLGSQAAWPGRC*STCSPR Trigger: CCTCGGACTACACGTGGAGCAGCAGCGCCCCGGCCA...CGCTGCCTGTGACCCCAGATAGCTATGAAAACCAAGCCATAGCGTGTGTGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | CGCACACACACGCTATGGCTTGGTTTTCATAGCTATCTGGGGTCACAGGCAGCGCCTCATGAACGGGCGTaGGCTCCACCCAGAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTHTLWLGFHSYLGSQAAPHERA*APPRNP Trigger: TGGGTTTCTGGGTGGAGCGCACGCCCGTTCATGAGG...CGCTGCCTGTGACCCCAGATAGCTATGAAAACCAAGCCATAGCGTGTGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | ATATACCTGGGTACAGGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAAGCTGCTAGCAGCAGCTaGACACACTGGGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IYLGTGRPWKVPAAAPEKAASSS*THWAWP Trigger: GGGCCAGGCCCAGTGTGTGCAGCTGCTGCTAGCAGC...TTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACCTGTACCCAGGTATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | ATATACCTGGGTACAGGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAAACTTGGCCGGGGCGCTaGTGCTCCACGTGTAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IYLGTGRPWKVPAAAPEKTWPGR*CSTCSP Trigger: CGGACTACACGTGGAGCAGCAGCGCCCCGGCCAAGT...TTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACCTGTACCCAGGTATAT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACGATGTGCACACACTGGGCCTaGCCCTGCAGACTTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKCQLLPQKNHPNGTMCTHWA*PCRLAA Trigger: TGCAGCAAGTCTGCAGGGCCAGGCCCAGTGTGTGCA...CATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATAGTCCTCGGACACCGGTaGCCTTCCTCAGGCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRVSYISGGTPHRGVCIVLGHR*PSSGSP Trigger: GGGTGAGCCTGAGGAAGGCCACCGGTGTCCGAGGAC...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACCTCACCCTGCAGAGCTaGGAGAGGCTAAGAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRPWKVPAAAPEKPSKWHLTLQS*ERLRGV Trigger: GACACCTCTTAGCCTCTCCCAGCTCTGCAGGGTGAG...GTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | GGCAGGTGTCCGCGTGGAGTCCGTGTGAATTATCTCTaGGCACGATGTTTCTCTGTTGGGCCCTGGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: GRCPRGVRVNYL*ARCFSVGPWDM Trigger: CATATCCCAGGGCCCAACAGAGAAACATCGTGCCAAGAGATAATTCACACGGACTCCACGCGGACACCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACGATGCCAAAATGGCAATCGTaGGCTTCCAGGTTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKCQLLPQKNHPNGTMPKWQS*ASRLAP Trigger: TGGGGCCAACCTGGAAGCCCACGATTGCCATTTTGG...CATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATAAGTACTCAAAGCACTTaGCCGGGGCGCTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRVSYISGGTPHRGVCISTQST*PGRCCS Trigger: GGAGCAGCAGCGCCCCGGCCAAGTGCTTTGAGTACT...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGACACTGGCCTTCTGGGGCTTCAGAGATCTTCTCTGGGTTCAGAAGAAGATCACACACTCAATGCTaGCTGAGGCACAGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARHWPSGASEIFSGFRRRSHTQC*LRHRHH Trigger: GTGATGCCTGTGCCTCAGGCAGCATTGAGTGTGTGA...TCTTCTTCTGAACCCAGAGAAGATCTCTGAAGCCCCAGAAGGCCAGTGTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | TCCCAGCACTCAGGAGACAGAGGCAGGCAGATCTCTTaGAGTTCAAAGCCAGCCCGGTTTAAAGTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQHSGDRGRQIS*SSKPARFKVSS Trigger: GGAACTCACTTTAAACCGGGCTGGCTTTGAACTCAAAGAGATCTGCCTGCCTCTGTCTCCTGAGTGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCACACAGTATGAAGCCTGTCCTGGCATAACTGTCCCCAAAAATAAGACAAGTCCGAGGGCTTCTTaGCCCGGTTGTCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLTQYEACPGITVPKNKTSPRAS*PGCPGH Trigger: ATGCCCGGGACAACCGGGGCAAGAAGCCCTCGGACT...TGTCTTATTTTTGGGGACAGTTATGCCAGGACAGGCTTCATACTGTGTGAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACCAACGTTCTTTACCTTaGCTGCATGATGAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRPWKVPAAAPEKPSKWHQRSLP*LHDEAQ Trigger: CTGCGCTTCATCATGCAGCCAAGGTAAAGAACGTTG...GTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACGATGGAGGGATGTTCAACTTaGCGACTTTCTCTAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLGKCQLLPQKNHPNGTMEGCST*RLSLVL Trigger: GAGGACTAGAGAAAGTCGCCAAGTTGAACATCCCTC...CATCGTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR TCA 90 bp | CATCTCACACAGTATGAAGCCTGTCCTGGCATAACTGTCCCCAAAAATAAGACACTGTCAATCAGCTGCTaGAGCTGGAGGCTCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HLTQYEACPGITVPKNKTLSISC*SWRLSP Trigger: GGGTGAGAGCCTCCAGCTTCAGCAGCTGATTGACAG...TGTCTTATTTTTGGGGACAGTTATGCCAGGACAGGCTTCATACTGTGTGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR TCA 90 bp | CAGATCTCTTTGAGTTCAAAGCCAGCCCGGTTTAAAGTGAGTTCCAGGACATCTTGCAGACTTGCTGCATaGAGGGGTGTGATCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QISLSSKPARFKVSSRTSCRLAA*RGVIES Trigger: GGACTCGATCACACCCCTTCATGCAGCAAGTCTGCA...AGATGTCCTGGAACTCACTTTAAACCGGGCTGGCTTTGAACTCAAAGAGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCTCTTTGAGTTCAAAGCCAGCCCGGTTTAAAGTGAGTTCCAGGACATCTCTCATGAAGTTTGGCTaGGTTCACATTGGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QISLSSKPARFKVSSRTSLMKFG*VHIGPC Trigger: GCAGGGGCCAATGTGAACGCAGCCAAACTTCATGAG...AGATGTCCTGGAACTCACTTTAAACCGGGCTGGCTTTGAACTCAAAGAGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCTGGGTTCAGAAGAAGACATCAAAAAGGACAACCAGAAGGAACATGAAGCCCTGCAGACTTGCTaGATGAAGGGGTGTGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGSEEDIKKDNQKEHEALQTC*MKGCDR Trigger: TCGATCACACCCCTTCATGCAGCAAGTCTGCAGGGC...TTCATGTTCCTTCTGGTTGTCCTTTTTGATGTCTTCTTCTGAACCCAGAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCTGGGTTCAGAAGAAGACATCAAAAAGGACAACCAGAAGGAACATGAAGCTTCACACACTCAATaGTGCCTGAGGCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLGSEEDIKKDNQKEHEASHTQ*CLRHRH Trigger: ATGCCTGTGCCTCAGGCAGCATTGAGTGTGTGAAGC...TTCATGTTCCTTCTGGTTGTCCTTTTTGATGTCTTCTTCTGAACCCAGAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTGGGTTCAGAAGAAGACATCAAAAAGGACAACCAGAAGGAACATGAAGAGTCCACAGTGACCTaGTTAACACATGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLGSEEDIKKDNQKEHEESTVT*LTHAPL Trigger: CAGTGGAGCATGTGTTAACCAGGTCACTGTGGACTC...TTCATGTTCCTTCTGGTTGTCCTTTTTGATGTCTTCTTCTGAACCCAGAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTTGGGAGGGTACAGTCTCATGAAGTTTaGCTGCGTTCACATTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLQILHLYKLFSSDLGRVQSHEV*LRSHWP Trigger: GGGCCAATGTGAACGCAGCCAAACTTCATGAGACTG...TACCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | AGATCTTACACCTGTATAAATTATTCTCTTCAGACCTaGGGAGGGTATCATATATTTCAGGGGGTACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSYTCINYSLQT*GGYHIFQGVHH Trigger: GTGGTGTACCCCCTGAAATATATGATACCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| 3UTR CAA 72 bp | TATTCTCTACCAAAAGATATAGCAGATGGGCTGTTATaGGGTTTTATTGCTAGAGGCAAGATTCTGTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YSLPKDIADGLL*GFIARGKILLQ Trigger: TTGTAACAGAATCTTGCCTCTAGCAATAAAACCCAATAACAGCCCATCTGCTATATCTTTTGGTAGAGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS TCA 90 bp | TTTCGCCCCATAGGACAGCAAGAGCTTCACACACTCAATGCTGCCTaGGGCACAGGCATCACAAAGAGGGGTGCTGCCGTCAATGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FRPIGQQELHTLNAA*GTGITKRGAAVNVA Trigger: CGCAACATTGACGGCAGCACCCCTCTTTGTGATGCCTGTGCCTCAGGCAGCATTGAGTGTGTGAAGCTCTTGCTGTCCTATGGGGCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS GCA 90 bp | TGCATGAAGGGGTGTGATCGAGTCCACAGTGACCTGGTTAACACATaGTCCACTGTCAATCAGCTGCTGAAGCTGGAGGCTCTCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CMKGCDRVHSDLVNT*STVNQLLKLEALTP Trigger: CGGGGTGAGAGCCTCCAGCTTCAGCAGCTGATTGACAGTGGAGCATGTGTTAACCAGGTCACTGTGGACTCGATCACACCCCTTCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAGGGTATCATATATTTCAGGGGGTACACCACACAGAGGGGTGTGCATAGTGCTGCCGTCAATGTaGCGTGCGTCCACCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGRVSYISGGTPHRGVCIVLPSM*RASTWA Trigger: TGCCCAGGTGGACGCACGCAACATTGACGGCAGCAC...TATGCACACCCCTCTGTGTGGTGTACCCCCTGAAATATATGATACCCTCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS TCA 90 bp | TCATGCAGGCCTCGTGTAGCGGGGATGCTGTGTACAAAGGAGGGTTaGCTTTCGCCCCATAGGACAGCAAGAGCTTCACACACTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SCRPRVAGMLCTKEG*LSPHRTARASHTQC Trigger: GCATTGAGTGTGTGAAGCTCTTGCTGTCCTATGGGGCGAAAGTCAACCCTCCTTTGTACACAGCATCCCCGCTACACGAGGCCTGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGACACTGGCCTTCTGGGGCTTCAGAGATCTTCTCTGGGTTCAGAAGAAGATTGGCTGCGTTCACATaGGCCCCTGCATTGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARHWPSGASEIFSGFRRRLAAFT*APALSN Trigger: GTTGCTCAATGCAGGGGCCAATGTGAACGCAGCCAA...TCTTCTTCTGAACCCAGAGAAGATCTCTGAAGCCCCAGAAGGCCAGTGTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGACCTTGGAAAGTGCCAGCTGCTGCCCCAGAAAAACCATCCAAATGGCACTCGTGGGCTTCCAGGTaGGCCCCAACATCAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRPWKVPAAAPEKPSKWHSWASR*APTSIR Trigger: TCTTATTGATGTTGGGGCCAACCTGGAAGCCCACGA...GTGCCATTTGGATGGTTTTTCTGGGGCAGCAGCTGGCACTTTCCAAGGTCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCAGAACTCATACCATGCCCAGGGCTAGGCAAAGCAAGGTGATAACTGGGACATTGGCCCCTGCATaGAGCAACACTTTGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TGRTHTMPRARQSKVITGTLAPA*SNTLTQ Trigger: CTGTGTCAAAGTGTTGCTCAATGCAGGGGCCAATGT...CCCAGTTATCACCTTGCTTTGCCTAGCCCTGGGCATGGTATGAGTTCTGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS GCA 90 bp | AAACTCTATGAGCATCTCGATGAGGTCAACGTTCTTTACCTTGGCTaGATGATGAAGCGCAGTCTCATGAAGTTTGGCTGCGTTCACATT | + |
|
Preference number: 5 (lower is better) Translates to: KLYEHLDEVNVLYLG*MMKRSLMKFGCVHI Trigger: AATGTGAACGCAGCCAAACTTCATGAGACTGCGCTTCATCATGCAGCCAAGGTAAAGAACGTTGACCTCATCGAGATGCTCATAGAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS-3UTR CAA 90 bp | CACATTTGCAGATCTTACACCTGTATAAATTATTCTCTTCAGACCTTGGGAGGGGCATTGAGCAACACTTaGACACAGTCCAAATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HICRSYTCINYSLQTLGGALSNT*TQSKCS Trigger: GGAGCATTTGGACTGTGTCAAAGTGTTGCTCAATGC...CCCTCCCAAGGTCTGAAGAGAATAATTTATACAGGTGTAAGATCTGCAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS GCA 72 bp | GGGCGCTGCTGCTCCACGTGTAGTCCGAGGGCTTCTTaGCCCGGTTGTCCCGGGCATAGATGTTGCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRCCSTCSPRAS*PGCPGHRCCLQ Trigger: TTGGAGGCAACATCTATGCCCGGGACAACCGGGGCAAGAAGCCCTCGGACTACACGTGGAGCAGCAGCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS CAA 72 bp | GCACAGGCATCACAAAGAGGGGTGCTGCCGTCAATGTaGCGTGCGTCCACCTGGGCACCAGCTGCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQASQRGVLPSM*RASTWAPAASS Trigger: GCTGCTAGCAGCTGGTGCCCAGGTGGACGCACGCAACATTGACGGCAGCACCCCTCTTTGTGATGCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
||
| CDS GCA 72 bp | CACAGGCATCACAAAGAGGGGTGCTGCCGTCAATGTTaGGTGCGTCCACCTGGGCACCAGCTGCTAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HRHHKEGCCRQC*VRPPGHQLLAA Trigger: TGCTGCTAGCAGCTGGTGCCCAGGTGGACGCACGCAACATTGACGGCAGCACCCCTCTTTGTGATGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| CDS GCA 72 bp | TCGCCCCATAGGACAGCAAGAGCTTCACACACTCAATaGTGCCTGAGGCACAGGCATCACAAAGAGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPHRTARASHTQ*CLRHRHHKEGC Trigger: GCACCCCTCTTTGTGATGCCTGTGCCTCAGGCAGCATTGAGTGTGTGAAGCTCTTGCTGTCCTATGGGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| CDS TCA 72 bp | ATAGGACAGCAAGAGCTTCACACACTCAATGCTGCCTaGGGCACAGGCATCACAAAGAGGGGTGCTGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: IGQQELHTLNAA*GTGITKRGAAV Trigger: GACGGCAGCACCCCTCTTTGTGATGCCTGTGCCTCAGGCAGCATTGAGTGTGTGAAGCTCTTGCTGTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| CDS GCA 72 bp | GGGTGTGATCGAGTCCACAGTGACCTGGTTAACACATaGTCCACTGTCAATCAGCTGCTGAAGCTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GCDRVHSDLVNT*STVNQLLKLEA Trigger: AGCCTCCAGCTTCAGCAGCTGATTGACAGTGGAGCATGTGTTAACCAGGTCACTGTGGACTCGATCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| CDS GCA 72 bp | GGCTGCATGATGAAGCGCAGTCTCATGAAGTTTGGCTaGGTTCACATTGGCCCCTGCATTGAGCAACACTTT | + |
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Preference number: 6 (lower is better) Translates to: GCMMKRSLMKFG*VHIGPCIEQHF Trigger: AAAGTGTTGCTCAATGCAGGGGCCAATGTGAACGCAGCCAAACTTCATGAGACTGCGCTTCATCATGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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| CDS GCA 72 bp | GAGCATCTCGATGAGGTCAACGTTCTTTACCTTGGCTaGATGATGAAGCGCAGTCTCATGAAGTTTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EHLDEVNVLYLG*MMKRSLMKFGC Trigger: GCAGCCAAACTTCATGAGACTGCGCTTCATCATGCAGCCAAGGTAAAGAACGTTGACCTCATCGAGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042288.8 |
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