Pregenerated sensors for ASB11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031382Ensembl transcript IDs: ENSMUST00000033755.6, ENSMUST00000036858.11
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATaGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LCLISIHNADPSTRK*RVLNHPKLDYYFPS Trigger: AGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR TCA 90 bp | TCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTaGATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: SVFIMLTLAPGNGGS*IIQNWTITFPLFQF Trigger: AAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTTCATTTAAGTGTCTGGGTTTATaGAAGCTTTATTCTAATTGG | + |
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Preference number: 2 (lower is better) Translates to: VLNHPKLDYYFPSISVSFKCLGL*KLYSNW Trigger: CCAATTAGAATAAAGCTTCCATAAACCCAGACACTT...AAATGAAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR TCA 72 bp | ATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTaGATCATCCAAAACTGGACTATTACTTTCCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: IMLTLAPGNGGS*IIQNWTITFPL Trigger: TAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR CCA 72 bp | ATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATaGAGGGTCCTGAATCATCCAAAACTGGACTATTAC | + |
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Preference number: 3 (lower is better) Translates to: ISIHNADPSTRK*RVLNHPKLDYY Trigger: GTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR-3UTR CAA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGGTTTCTGGTTACCTCTaGGCAATCATTAAACTAACC | + |
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Preference number: 3 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLVSGYL*AIIKLT Trigger: GGTTAGTTTAATGATTGCCAAGAGGTAACCAGAAAC...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR-3UTR CAA 90 bp | GTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTTCATTTGTTTCTGGTTACCTCTaGGCAATCATTAAACTAACC | + |
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Preference number: 3 (lower is better) Translates to: VLNHPKLDYYFPSISVSFVSGYL*AIIKLT Trigger: GGTTAGTTTAATGATTGCCAAGAGGTAACCAGAAAC...AAATGAAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | ATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATCATCCAAAAGCAGGTGGACCTTCATaGAGCAGGAGAGCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IHNADPSTRKWRVLNHPKAGGPS*SRRACR Trigger: GCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGC...TTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | ATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGTGGGCTGCAGCCTCATaGAGTGGGGATCGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ICLCLISIHNADPSTRKWWAAAS*SGDRSA Trigger: GGCTGATCGATCCCCACTCCATGAGGCTGCAGCCCA...CCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | TTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATGCCAGTAAGCGTCCCTaGGCTGCAGCCTCATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LISIHNADPSTRKWRVLNASKRP*AAASWS Trigger: ACTCCATGAGGCTGCAGCCCAGGGACGCTTACTGGC...ATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | CTAACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTACACTGCAGCGTGCAGTaGGGTATCCAGCCACTGACC | + |
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Preference number: 4 (lower is better) Translates to: LTRSLFSTSVWVYGSFILHCSVQ*GIQPLT Trigger: GGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTG...TAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | TTAGGGAAACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGGCAGGTGGACCTTCATaGAGCAGGAGAGCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGKQQTNKIYRRRSESRGAGGPS*SRRACR Trigger: GCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGC...CCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTTTCCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | CTAACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTACACTGCAGCAAGCATTaGAGAGGGGAGTGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LTRSLFSTSVWVYGSFILHCSKH*RGEWPH Trigger: ATGGGGCCACTCCCCTCTTCAATGCTTGCTGCAGTG...TAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | ATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATCATCCAAAATCCATGCACTCTCTGTaGCCTCGCTTCACTGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: IHNADPSTRKWRVLNHPKSMHSL*PRFTAS Trigger: CGAAGCAGTGAAGCGAGGTCACAGAGAGTGCATGGA...TTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | CTAACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAACTGGACTGCCTCACTaGAGCGTGCAGTGGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: LTRSLFSTSVWVYGSFILTGLPH*SVQWGI Trigger: GATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGT...TAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGTGGGCTGCAGCCTCATaGAGTGGGGATCGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLWAAAS*SGDRSA Trigger: GGCTGATCGATCCCCACTCCATGAGGCTGCAGCCCA...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | ATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATCATCCAAAACCAAGGCATGCCTCATaGAGAGAGGAGACCCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: IHNADPSTRKWRVLNHPKPRHAS*REETRF Trigger: AAACCGGGTCTCCTCTCTCCATGAGGCATGCCTTGG...TTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | ACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTAGGGGAGTGGCCCCATaGACAGTCTGGGCATTGACA | + |
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Preference number: 4 (lower is better) Translates to: TRSLFSTSVWVYGSFILIRGVAP*TVWALT Trigger: TGTCAATGCCCAGACTGTTCATGGGGCCACTCCCCT...AATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGAGGGGAGTGGCCCCATaGACAGTCTGGGCATTGACA | + |
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Preference number: 4 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLRGVAP*TVWALT Trigger: TGTCAATGCCCAGACTGTTCATGGGGCCACTCCCCT...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | CTAACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAACTCCAACAGCACATTaGCACACGCAGCACTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LTRSLFSTSVWVYGSFILTPTAH*HTQHCH Trigger: GTGGCAGTGCTGCGTGTGTCAATGTGCTGTTGGAGT...TAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | GAAATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCGGGGTATCCAGCCACTaGCCATGGTCAACACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EMEGPESSKTGLLLSLYFGVSSH*PWSTLA Trigger: AGCCAGTGTTGACCATGGTCAGTGGCTGGATACCCC...GAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | ATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTCACAGTCGGCAGAGCTaGGAAAGAGCAGGTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: MEGPESSKTGLLLSLYFSHSRQS*ERAGGP Trigger: AGGTCCACCTGCTCTTTCTCAGCTCTGCCGACTGTG...ACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGTGCAGCCTCATGGAGTaGGGATCGATCAGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLCSLME*GSISPA Trigger: TGCTGGGCTGATCGATCCCCACTCCATGAGGCTGCA...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | ATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATCATCCAAAATCTCAAGCTGGGCCTTaGCTCCAAACTCCAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: IHNADPSTRKWRVLNHPKSQAGP*LQTPTA Trigger: TGCTGTTGGAGTTTGGAGCCAAGGCCCAGCTTGAGA...TTTTGGATGATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGCACTGCAGCGTGCAGTaGGGTATCCAGCCACTGACC | + |
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Preference number: 4 (lower is better) Translates to: NFICLCLISIHNADPSTRHCSVQ*GIQPLT Trigger: GGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTG...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | AAATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCACACTGCAGCAAGCATTaGAGAGGGGAGTGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: KWRVLNHPKLDYYFPSISHCSKH*RGEWPH Trigger: ATGGGGCCACTCCCCTCTTCAATGCTTGCTGCAGTG...TGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | TTAGGGAAACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGACTCCAACAGCACATTaGCACACGCAGCACTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGKQQTNKIYRRRSESRGTPTAH*HTQHCH Trigger: GTGGCAGTGCTGCGTGTGTCAATGTGCTGTTGGAGT...CCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTTTCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | CTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGAGGCGTTCCCAGCTaGGGAACCTCTTGCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: LVQHKCLGLWKLYSNWVSRGVPS*GTSCSM Trigger: CATTGAGCAAGAGGTTCCTCAGCTGGGAACGCCTCT...ACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | TTAGGGAAACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGAGAGGCGTTCCCAGCTaGGGAACCTCTTGCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: LGKQQTNKIYRRRSESRGRGVPS*GTSCSM Trigger: CATTGAGCAAGAGGTTCCTCAGCTGGGAACGCCTCT...CCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTTTCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGGGGGTATCCAGCCACTaGCCATGGTCAACACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NFICLCLISIHNADPSTRGVSSH*PWSTLA Trigger: AGCCAGTGTTGACCATGGTCAGTGGCTGGATACCCC...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGATGACCCCCAAGGCATaGCTCATGGAGAGAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLMTPKA*LMERGD Trigger: GTCTCCTCTCTCCATGAGGCATGCCTTGGGGGTCAT...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGACTGGACTGCCTCACTaGAGCGTGCAGTGGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: NFICLCLISIHNADPSTRTGLPH*SVQWGI Trigger: GATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGT...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | CTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTCCAAGGCATGCCTCATaGAGAGAGGAGACCCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVQHKCLGLWKLYSNWVSPRHAS*REETRF Trigger: AAACCGGGTCTCCTCTCTCCATGAGGCATGCCTTGG...ACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | ATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGTCTCAAGCTGGGCCTTaGCTCCAAACTCCAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: ICLCLISIHNADPSTRKWSQAGP*LQTPTA Trigger: TGCTGTTGGAGTTTGGAGCCAAGGCCCAGCTTGAGA...CCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | AAATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAATGACCCCCAAGGCATaGCTCATGGAGAGAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KWRVLNHPKLDYYFPSISMTPKA*LMERGD Trigger: GTCTCCTCTCTCCATGAGGCATGCCTTGGGGGTCAT...TGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | CACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGATTTTTAGCCAGTAAGCGTCCCTaGGCTGCAGCCTCATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HKCLGLWKLYSNWVSRFLASKRP*AAASWS Trigger: ACTCCATGAGGCTGCAGCCCAGGGACGCTTACTGGC...TAAAAATCTACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR TCA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGATGGTCCAGGCCTTCTaGCACCTTCTTCACCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: NFICLCLISIHNADPSTRMVQAF*HLLHQL Trigger: TAGCTGGTGAAGAAGGTGTCAGAAGGCCTGGACCAT...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033755.6 |
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| CDS-3UTR TCA 90 bp | CACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGATTTTTACACAGTCGGCAGAGCTaGGAAAGAGCAGGTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: HKCLGLWKLYSNWVSRFLHSRQS*ERAGGP Trigger: AGGTCCACCTGCTCTTTCTCAGCTCTGCCGACTGTG...TAAAAATCTACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | GAAATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCTCAGCAGAATCTCCATaGACTCTCTGTGACCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: EMEGPESSKTGLLLSLYFSAESP*TLCDLA Trigger: AGCGAGGTCACAGAGAGTGCATGGAGATTCTGCTGA...GAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTTCATTTTGCAGCCTCATGGAGTaGGGATCGATCAGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VLNHPKLDYYFPSISVSFCSLME*GSISPA Trigger: TGCTGGGCTGATCGATCCCCACTCCATGAGGCTGCA...AAATGAAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| 3UTR CAA 72 bp | GGTTACCTCTTGGCAATCATTAAACTAACCAGGAGCTaGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GYLLAIIKLTRS*FSTSVWVYGSF Trigger: AAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGTTAGTTTAATGATTGCCAAGAGGTAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | CTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGCACTTTTGCCCTGTaGATTTCTGAGGTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LVQHKCLGLWKLYSNWVSSTFAL*ISEVQV Trigger: AACCTGAACCTCAGAAATGCACAGGGCAAAAGTGCT...ACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGAGCACTTTTGCCCTGTaGATTTCTGAGGTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGKQQTNKIYRRRSESRGSTFAL*ISEVQV Trigger: AACCTGAACCTCAGAAATGCACAGGGCAAAAGTGCT...CCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTTTCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | TTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATCTCTGCTATCCTAGCTaGCTCTTTTCTGTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LISIHNADPSTRKWRVLNLCYPS*LFSVSF Trigger: AAAGGAAACAGAAAAGAGGCAGCTAGGATAGCAGAG...ATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | AAATGGAGGGTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGACCATGGTCAACACTaGCTCCTAGTTCTAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: KWRVLNHPKLDYYFPSISDHGQH*LLVLEA Trigger: AGCTTCTAGAACTAGGAGCCAGTGTTGACCATGGTC...TGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGACCCTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTTCATTTAGAAATCTCTTTCCATaGTCCAGGCCTTCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: VLNHPKLDYYFPSISVSFRNLFP*SRPSDT Trigger: GGTGTCAGAAGGCCTGGACCATGGAAAGAGATTTCT...AAATGAAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033755.6 |
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| CDS-3UTR GCA 90 bp | CTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTTTGACGTTGATGCCTTaGGCAATTAAAGTTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LVQHKCLGLWKLYSNWVSLTLMP*AIKVLR Trigger: TCTTAAAACTTTAATTGCGCAAGGCATCAACGTCAA...ACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | CACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGATTTTTAACTACTTTTGGGCACTaGAAGGTCAAGAGCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: HKCLGLWKLYSNWVSRFLTTFGH*KVKSTF Trigger: AAAAGTGCTCTTGACCTTGCAGTGCCCAAAAGTAGT...TAAAAATCTACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR GCA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGTTGACGTTGATGCCTTaGGCAATTAAAGTTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NFICLCLISIHNADPSTRLTLMP*AIKVLR Trigger: TCTTAAAACTTTAATTGCGCAAGGCATCAACGTCAA...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 90 bp | CCAGGGATTCTGGCAGGCCTAGCGCGTAGATGGCGTGATGACACGTaGGACCCAAGCACTTCCGGACACACAGTCGGCAGAGCTGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PGILAGLARRWRDDT*DPSTSGHTVGRAEK Trigger: TTTCTCAGCTCTGCCGACTGTGTGTCCGGAAGTGCTTGGGTCGCACGTGTCATCACGCCATCTACGCGCTAGGCCTGCCAGAATCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 90 bp | CAAGCACTTCCGGACACACAGTCGGCAGAGCTGAGAAAGAGCAGGTaGACCTTCATGGAGCAGGAGAGCCTGCCGCACACTACTTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: QALPDTQSAELRKSR*TFMEQESLPHTTFG Trigger: CCCAAAAGTAGTGTGCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGCTCTTTCTCAGCTCTGCCGACTGTGTGTCCGGAAGTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 90 bp | CTCCATGCACTCTCTGTGACCTCGCTTCACTGCTTCGTGGATCGGTaGAGCCAGGTAGATCTCAAGCTGGGCCTTGGCTCCAAACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LHALSVTSLHCFVDR*SQVDLKLGLGSKLQ Trigger: TTGGAGTTTGGAGCCAAGGCCCAGCTTGAGATCTACCTGGCTTCACCGATCCACGAAGCAGTGAAGCGAGGTCACAGAGAGTGCATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 90 bp | ACACTGGACTGCCTCACTGCAGCGTGCAGTGGGGTATCCAGCCACTaGCCATGGTCAACACTGGCTCCTAGTTCTAGAAGCTTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: TLDCLTAACSGVSSH*PWSTLAPSSRSFFT Trigger: TGTGAAGAAGCTTCTAGAACTAGGAGCCAGTGTTGACCATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 90 bp | ATACACAGTGAGCAGATTGATGACCTCCACACTGGACTGCCTCACTaGAGCGTGCAGTGGGGTATCCAGCCACTGACCATGGTCAACACT | + |
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Preference number: 5 (lower is better) Translates to: IHSEQIDDLHTGLPH*SVQWGIQPLTMVNT Trigger: AGTGTTGACCATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGTGTGGAGGTCATCAATCTGCTCACTGTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 90 bp | ATAAGAGGAATTTTTCCAGGGATTCTGGCAGGCCTAGCGCGTAGATaGCGTGATGACACGTGCGACCCAAGCACTTCCGGACACACAGTC | + |
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Preference number: 5 (lower is better) Translates to: IRGIFPGILAGLARR*RDDTCDPSTSGHTV Trigger: GACTGTGTGTCCGGAAGTGCTTGGGTCGCACGTGTCATCACGCCATCTACGCGCTAGGCCTGCCAGAATCCCTGGAAAAATTCCTCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 90 bp | TTGACATGTGCACCGTTTTCTAGCAAGGCCTTAGCACAGGCCACATaGCCCCCAAGGCATGCCTCATGGAGAGAGGAGACCCGGTTTATT | + |
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Preference number: 5 (lower is better) Translates to: LTCAPFSSKALAQAT*PPRHASWREETRFI Trigger: AATAAACCGGGTCTCCTCTCTCCATGAGGCATGCCTTGGGGGTCATGTGGCCTGTGCTAAGGCCTTGCTAGAAAACGGTGCACATGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 90 bp | TTGATGCCTTGCGCAATTAAAGTTTTAAGAGCCAGTAAGCGTCCCTaGGCTGCAGCCTCATGGAGTGGGGATCGATCAGCCCAGCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LMPCAIKVLRASKRP*AAASWSGDRSAQQS Trigger: AGACTGCTGGGCTGATCGATCCCCACTCCATGAGGCTGCAGCCCAGGGACGCTTACTGGCTCTTAAAACTTTAATTGCGCAAGGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 90 bp | TCAACTCTCTGGTATGTACAGGCCACATACAGAGGCGTTCCCAGCTaGGGAACCTCTTGCTCAATGTTAACATCCTTTGTCAGCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: STLWYVQATYRGVPS*GTSCSMLTSFVSRI Trigger: GATTCTGCTGACAAAGGATGTTAACATTGAGCAAGAGGTTCCTCAGCTGGGAACGCCTCTGTATGTGGCCTGTACATACCAGAGAGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | AACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTTCCTTGATCTCAAGCTGGGCCTaGGCTCCAAACTCCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: NNKLTKYTGEGVNPEGSLISSWA*APNSNS Trigger: GCTGTTGGAGTTTGGAGCCAAGGCCCAGCTTGAGAT...CAAGGAACCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | TTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAAATGGAGGGTCCTGAATTACACAGTGAGCAGATaGATGACCTCCACACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LISIHNADPSTRKWRVLNYTVSR*MTSTLD Trigger: GTCCAGTGTGGAGGTCATCAATCTGCTCACTGTGTA...ATTCAGGACCCTCCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | TTAGGGAAACAACAAACTAACAAAATATACCGGAGAAGGAGTGAATCCAGAGGGTGCCGCACACTACTTTaGGGCACTGCAAGGTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LGKQQTNKIYRRRSESRGCRTLL*GTARSR Trigger: TCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCA...CCCTCTGGATTCACTCCTTCTCCGGTATATTTTGTTAGTTTGTTGTTTCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAACTCCAACAGCACATaGACACACGCAGCACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: NFICLCLISIHNADPSTRNSNST*THAALP Trigger: TGGCAGTGCTGCGTGTGTCAATGTGCTGTTGGAGTT...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | ACCAGGAGCTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTAGGTCAAGAGCACTTTaGCCCTGTGCATTTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TRSLFSTSVWVYGSFILIRSRAL*PCAFLR Trigger: CCTCAGAAATGCACAGGGCAAAAGTGCTCTTGACCT...AATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAGCTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | AATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCAGGAGGTCAAGAGCACTTTaGCCCTGTGCATTTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: NFICLCLISIHNADPSTRRSRAL*PCAFLR Trigger: CCTCAGAAATGCACAGGGCAAAAGTGCTCTTGACCT...CCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | GTCCTGAATCATCCAAAACTGGACTATTACTTTCCCTCTATTTCAGTTTCATTTAACTCCAACAGCACATaGACACACGCAGCACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: VLNHPKLDYYFPSISVSFNSNST*THAALP Trigger: TGGCAGTGCTGCGTGTGTCAATGTGCTGTTGGAGTT...AAATGAAACTGAAATAGAGGGAAAGTAATAGTCCAGTTTTGGATGATTCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | CACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGATTTTTATGCCGCACACTACTTTaGGGCACTGCAAGGTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: HKCLGLWKLYSNWVSRFLCRTLL*GTARSR Trigger: TCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCA...TAAAAATCTACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | TTTAATTTTATCTGCCTGTGTTTAATCAGTATTCATAATGCTGACCCTAGCACCTACACAGTGAGCAGATaGATGACCTCCACACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: FNFICLCLISIHNADPSTYTVSR*MTSTLD Trigger: GTCCAGTGTGGAGGTCATCAATCTGCTCACTGTGTA...GGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGCAGATAAAATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | CTTGTTCAGCACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTTTTATTGTTACAAGATaGACGTTGATGCCTTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: LVQHKCLGLWKLYSNWVSFIVTR*TLMPCA Trigger: TGCGCAAGGCATCAACGTCAATCTTGTAACAATAAA...ACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTGCTGAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS-3UTR CAA 90 bp | CACAAGTGTCTGGGTTTATGGAAGCTTTATTCTAATTGGGTGAGTAGATTTTTATTTATTGTTACAAGATaGACGTTGATGCCTTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HKCLGLWKLYSNWVSRFLFIVTR*TLMPCA Trigger: TGCGCAAGGCATCAACGTCAATCTTGTAACAATAAA...TAAAAATCTACTCACCCAATTAGAATAAAGCTTCCATAAACCCAGACACTTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 72 bp | CTGGCAGGCCTAGCGCGTAGATGGCGTGATGACACGTaGGACCCAAGCACTTCCGGACACACAGTCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAGLARRWRDDT*DPSTSGHTVGR Trigger: TCTGCCGACTGTGTGTCCGGAAGTGCTTGGGTCGCACGTGTCATCACGCCATCTACGCGCTAGGCCTGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 72 bp | GACCTCCACACTGGACTGCCTCACTGCAGCGTGCAGTaGGGTATCCAGCCACTGACCATGGTCAACACTGGC | + |
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Preference number: 6 (lower is better) Translates to: DLHTGLPHCSVQ*GIQPLTMVNTG Trigger: GCCAGTGTTGACCATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGTGTGGAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 72 bp | CCGGACACACAGTCGGCAGAGCTGAGAAAGAGCAGGTaGACCTTCATGGAGCAGGAGAGCCTGCCGCACACT | + |
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Preference number: 6 (lower is better) Translates to: PDTQSAELRKSR*TFMEQESLPHT Trigger: AGTGTGCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGCTCTTTCTCAGCTCTGCCGACTGTGTGTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 72 bp | GCACCGTTTTCTAGCAAGGCCTTAGCACAGGCCACATaGCCCCCAAGGCATGCCTCATGGAGAGAGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: APFSSKALAQAT*PPRHASWREET Trigger: GGTCTCCTCTCTCCATGAGGCATGCCTTGGGGGTCATGTGGCCTGTGCTAAGGCCTTGCTAGAAAACGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 72 bp | GAGCAGATTGATGACCTCCACACTGGACTGCCTCACTaGAGCGTGCAGTGGGGTATCCAGCCACTGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: EQIDDLHTGLPH*SVQWGIQPLTM Trigger: CATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGTGTGGAGGTCATCAATCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 72 bp | TGCCTCACTGCAGCGTGCAGTGGGGTATCCAGCCACTaGCCATGGTCAACACTGGCTCCTAGTTCTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CLTAACSGVSSH*PWSTLAPSSRS Trigger: GCTTCTAGAACTAGGAGCCAGTGTTGACCATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 72 bp | TACACAGTGAGCAGATTGATGACCTCCACACTGGACTaGCTCACTGCAGCGTGCAGTGGGGTATCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: YTVSRLMTSTLD*LTAACSGVSSH Trigger: GTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCCAGTGTGGAGGTCATCAATCTGCTCACTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS GCA 72 bp | GAAAGAGCAGGTGGACCTTCATGGAGCAGGAGAGCCTaGCGCACACTACTTTTGGGCACTGCAAGGTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ERAGGPSWSRRA*RTLLLGTARSR Trigger: TCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 72 bp | CTTCATGGAGCAGGAGAGCCTGCCGCACACTACTTTTaGGCACTGCAAGGTCAAGAGCACTTTTGCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LHGAGEPAAHYF*ALQGQEHFCPV Trigger: CACAGGGCAAAAGTGCTCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCAGGCTCTCCTGCTCCATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CAA 90 bp | TGTGCATTTCTGAGGTTCAGGTTAGCCCCATACACAGTGAGCAGATaGATGACCTCCACACTGGACTGCCTCACTGCAGCGTGCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CAFLRFRLAPYTVSR*MTSTLDCLTAACSG Trigger: CCCACTGCACGCTGCAGTGAGGCAGTCCAGTGTGGAGGTCATCAATCTGCTCACTGTGTATGGGGCTAACCTGAACCTCAGAAATGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CCA 72 bp | TGCGCAATTAAAGTTTTAAGAGCCAGTAAGCGTCCCTaGGCTGCAGCCTCATGGAGTGGGGATCGATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CAIKVLRASKRP*AAASWSGDRSA Trigger: GGCTGATCGATCCCCACTCCATGAGGCTGCAGCCCAGGGACGCTTACTGGCTCTTAAAACTTTAATTGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CAA 90 bp | GCCTGCCGCACACTACTTTTGGGCACTGCAAGGTCAAGAGCACTTTaGCCCTGTGCATTTCTGAGGTTCAGGTTAGCCCCATACACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ACRTLLLGTARSRAL*PCAFLRFRLAPYTV Trigger: CACTGTGTATGGGGCTAACCTGAACCTCAGAAATGCACAGGGCAAAAGTGCTCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 72 bp | ACATCCTTTGTCAGCAGAATCTCCATGCACTCTCTGTaGCCTCGCTTCACTGCTTCGTGGATCGGTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSFVSRISMHSL*PRFTASWIGEA Trigger: GGCTTCACCGATCCACGAAGCAGTGAAGCGAGGTCACAGAGAGTGCATGGAGATTCTGCTGACAAAGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS TCA 72 bp | TGGTATGTACAGGCCACATACAGAGGCGTTCCCAGCTaGGGAACCTCTTGCTCAATGTTAACATCCTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WYVQATYRGVPS*GTSCSMLTSFV Trigger: GACAAAGGATGTTAACATTGAGCAAGAGGTTCCTCAGCTGGGAACGCCTCTGTATGTGGCCTGTACATACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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| CDS CAA 90 bp | GCCTCATGGAGAGAGGAGACCCGGTTTATTGTTACAAGATTGACGTaGATGCCTTGCGCAATTAAAGTTTTAAGAGCCAGTAAGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASWREETRFIVTRLT*MPCAIKVLRASKRP Trigger: GGGACGCTTACTGGCTCTTAAAACTTTAATTGCGCAAGGCATCAACGTCAATCTTGTAACAATAAACCGGGTCTCCTCTCTCCATGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033755.6 ENSMUST00000036858.11 |
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