Pregenerated sensors for ASB10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038204Ensembl transcript IDs: ENSMUST00000048302.13, ENSMUST00000117900.8, ENSMUST00000119657.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTCTCCACCCTCCTGTCTCTGCCTCTCTCCACCCTCCTGTCTCTaGCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: HSPPSCLCLSPPSCL*LPRTNTCTIALGFS Trigger: GCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCAGAGACAGGAGGGTGGAGAGAGGCAGAGACAGGAGGGTGGAGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 90 bp | GGCTTCAGCCTAGAGATTTCCAGTGCGCACACAGATCTGCACAGGTaGCCTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GFSLEISSAHTDLHR*PLHHYQPGADLASS Trigger: AGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAGGGCACCTGTGCAGATCTGTGTGCGCACTGGAAATCTCTAGGCTGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 90 bp | CTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTaGCCACCCACCCTTCAGGCCACCTGTTCTGACAAGTTCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: LQPLTTSFSLHTPLS*PPTLQATCSDKFSL Trigger: GAGTGAGAACTTGTCAGAACAGGTGGCCTGAAGGGTGGGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 90 bp | GCAGTGAGGCAGCTTGCACAAGGCCTAACCTACCCTGATTCTGTGTaGGGGAGTCACATCCAGGCAGATGGAGGCTTGCTGGAGACAGTA | + |
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Preference number: 1 (lower is better) Translates to: AVRQLAQGLTYPDSV*GSHIQADGGLLETV Trigger: TACTGTCTCCAGCAAGCCTCCATCTGCCTGGATGTGACTCCCTCACACAGAATCAGGGTAGGTTAGGCCTTGTGCAAGCTGCCTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 90 bp | TTAATAAAGCAGATTAAAAAGAACAAGAGCCAGATGTGCACTGAGTaGTGCTTCCAGACCTATAGGTGGCATGAGCAGTGGAGAAATGGT | + |
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Preference number: 1 (lower is better) Translates to: LIKQIKKNKSQMCTE*CFQTYRWHEQWRNG Trigger: ACCATTTCTCCACTGCTCATGCCACCTATAGGTCTGGAAGCATCACTCAGTGCACATCTGGCTCTTGTTCTTTTTAATCTGCTTTATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCATGCACAGGTGCCCTCTaGATCACTACCAGCCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPCTGAL*ITTSRV Trigger: CACCCGGCTGGTAGTGATGCAGAGGGCACCTGTGCA...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCCCACCCTCCTGTCTCTaGCTCCCAAGGACTAACACC | + |
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Preference number: 2 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTPPSCL*LPRTNT Trigger: GGTGTTAGTCCTTGGGAGGCAGAGACAGGAGGGTGG...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGTTGTTTTCTTAACCATGCAGAGGGCCCCATCCTCATCCAAGCCGGGGCTGAGAGATGCCCTTaGGGTGGGGGTGGGGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RNGCFLNHAEGPILIQAGAERCP*GGGGVC Trigger: GCAGACCCCACCCCCACCCCAAGGGCATCTCTCAGC...CCCGGCTTGGATGAGGATGGGGCCCTCTGCATGGTTAAGAAAACAACCATTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR TCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACTACCAGCCGGGTGCTaGTCTGGCCTCTTCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPLPAGC*SGLFSQ Trigger: TTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAG...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | AGGCTATTAACCACTGCATGTGAGGAGAGGAGGCAGGTTGGCCTGGGACCTGTTTTCATTGCTGAGAGATaGCCTTGGGGTGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RLLTTACEERRQVGLGPVFIAER*PWGGGG Trigger: CCCACCCCCACCCCAAGGGCATCTCTCAGCAATGAA...AACAGGTCCCAGGCCAACCTGCCTCCTCTCCTCACATGCAGTGGTTAATAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCTCTCAAGTGTGGATCGTCCACTCCTGACTTaGAGACAGACCGCCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LCITTSRVLIWPLLSSVDRPLLT*RQTALH Trigger: ATGCAAGGCGGTCTGTCTTCAAGTCAGGAGTGGACG...ATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTCAAGGCGTCCACTCCTaGCTTGAAGACAGACCGCCT | + |
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Preference number: 2 (lower is better) Translates to: CLPRTNTCTIALGFSLEIQGVHS*LEDRPP Trigger: AGGCGGTCTGTCTTCAAGTCAGGAGTGGACGCCTTG...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | CCGGGGGTTACTTTGTCTTCCACATCTGTGAACCCTGTCCCAGGGGCTTTCCCAACAGATCTGCACAGGTaGCCTCTGCATCACTACCAG | + |
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Preference number: 2 (lower is better) Translates to: PGVTLSSTSVNPVPGAFPTDLHR*PLHHYQ Trigger: CTGGTAGTGATGCAGAGGGCACCTGTGCAGATCTGT...TGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAAGCAGTGAGGCAGCTTaGACAAGGCCTAACCTACCC | + |
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Preference number: 2 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPSSEAA*TRPNLP Trigger: GGGTAGGTTAGGCCTTGTGCAAGCTGCCTCACTGCT...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CCA 90 bp | AGGCTATTAACCACTGCATGTGAGGAGAGGAGGCAGGTTGGCCTGGGACCTGTTCCACATAGCACAATGTaGCCACTCTCCACCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLLTTACEERRQVGLGPVPHSTM*PLSTLL Trigger: CAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGG...AACAGGTCCCAGGCCAACCTGCCTCCTCTCCTCACATGCAGTGGTTAATAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTAGCCGGGTGCTGATCTaGCCTCTTCTCTCAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CLPRTNTCTIALGFSLEISRVLI*PLLSSV Trigger: CACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCT...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR TCA 90 bp | AGAAATGGTTGTTTTCTTAACCATGCAGAGGGCCCCATCCTCATCCAAGCCGGGCCTGGGACCTGTTACTaGGTACTGAAGGGAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RNGCFLNHAEGPILIQAGPGTCY*VLKGAV Trigger: CACTGCTCCCTTCAGTACTCAGTAACAGGTCCCAGG...CCCGGCTTGGATGAGGATGGGGCCCTCTGCATGGTTAAGAAAACAACCATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR GCA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCAAGGACTAACACCTaGACCATTGCTCTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLPRTNT*TIALGF Trigger: GAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGG...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGTTGTTTTCTTAACCATGCAGAGGGCCCCATCCTCATCCAAGCCGGGCAGATGGAGGCTTGCTaGAGACAGTACCAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: RNGCFLNHAEGPILIQAGQMEAC*RQYQIT Trigger: TGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTG...CCCGGCTTGGATGAGGATGGGGCCCTCTGCATGGTTAAGAAAACAACCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | GCACAGGTGCCCTCTGCATCACTACCAGCCGGGTGCTaGTCTGGCCTCTTCTCTCAAGTGTGGATCAAGGCG | + |
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Preference number: 3 (lower is better) Translates to: AQVPSASLPAGC*SGLFSQVWIKA Trigger: CGCCTTGATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAGGGCACCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR CCA 72 bp | GGTGCCCTCTGCATCACTACCAGCCGGGTGCTGATCTaGCCTCTTCTCTCAAGTGTGGATCAAGGCGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: GALCITTSRVLI*PLLSSVDQGVH Trigger: GTGGACGCCTTGATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAGGGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | CATCCAAGCCGGGGGTTACTTTGTCTTCCACATCTGTaGACCCTGTCCCAGGGGCTTTCCCATCTCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HPSRGLLCLPHL*TLSQGLSHLQP Trigger: GGGCTGGAGATGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGGCTTGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | TTTCCAGTGCGCACACAGATCTGCACAGGTGCCCTCTaGATCACTACCAGCCGGGTGCTGATCTGGCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: FPVRTQICTGAL*ITTSRVLIWPL Trigger: AAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAGGGCACCTGTGCAGATCTGTGTGCGCACTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | CTAGAGATTTCCAGTGCGCACACAGATCTGCACAGGTaGCCTCTGCATCACTACCAGCCGGGTGCTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: LEISSAHTDLHR*PLHHYQPGADL Trigger: CAGATCAGCACCCGGCTGGTAGTGATGCAGAGGGCACCTGTGCAGATCTGTGTGCGCACTGGAAATCTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | CCACCCTCCTGTCTCTGCCTCCCAAGGACTAACACCTaGACCATTGCTCTGGGCTTCAGCCTAGAGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: PPSCLCLPRTNT*TIALGFSLEIS Trigger: GGAAATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCAGAGACAGGAGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CAA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCGCCTTGCATCATTCATaGCTGAGAGATGCCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTALHHS*LRDALG Trigger: CCCAAGGGCATCTCTCAGCAATGAATGATGCAAGGC...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGGTTGTTTTCTTAACCATGCAGAGGGCCCCATCCTCATCCAAGCCGGGAGGAGAGGAGGCAGGTaGGCCTGGGACCTGTTACTG | + |
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Preference number: 3 (lower is better) Translates to: RNGCFLNHAEGPILIQAGRRGGR*AWDLLL Trigger: CAGTAACAGGTCCCAGGCCAACCTGCCTCCTCTCCT...CCCGGCTTGGATGAGGATGGGGCCCTCTGCATGGTTAAGAAAACAACCATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | CAGCTTGCACAAGGCCTAACCTACCCTGATTCTGTGTaGGGGAGTCACATCCAGGCAGATGGAGGCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QLAQGLTYPDSV*GSHIQADGGLL Trigger: CAGCAAGCCTCCATCTGCCTGGATGTGACTCCCTCACACAGAATCAGGGTAGGTTAGGCCTTGTGCAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | CACCATTGCTCTGGGCTTCAGCCTAGAGATTTCCAGTaGGCACACAGATCTGCACAGGTGCCCTCTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: HHCSGLQPRDFQ*AHRSAQVPSAS Trigger: TGATGCAGAGGGCACCTGTGCAGATCTGTGTGCGCACTGGAAATCTCTAGGCTGAAGCCCAGAGCAATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | CTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTaGCCACCCACCCTTCAGGCCACCTGTTCTGACAAG | + |
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Preference number: 3 (lower is better) Translates to: LTTSFSLHTPLS*PPTLQATCSDK Trigger: CTTGTCAGAACAGGTGGCCTGAAGGGTGGGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | CAAGTTCTCACTCTAGAGGCTATTAACCACTGCATGTaGGGAGAGGAGGCAGGTTGGCCTGGGACCTGTTAC | + |
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Preference number: 3 (lower is better) Translates to: QVLTLEAINHCM*GEEAGWPGTCY Trigger: GTAACAGGTCCCAGGCCAACCTGCCTCCTCTCCTCACATGCAGTGGTTAATAGCCTCTAGAGTGAGAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | TCTGTCTTGCCCACCCACCCTTCAGGCCACCTGTTCTaGCAAGTTCTCACTCTAGAGGCTATTAACCACTGC | + |
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Preference number: 3 (lower is better) Translates to: SVLPTHPSGHLF*QVLTLEAINHC Trigger: GCAGTGGTTAATAGCCTCTAGAGTGAGAACTTGTCAGAACAGGTGGCCTGAAGGGTGGGTGGGCAAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR GCA 72 bp | CTGTGTGAGGGAGTCACATCCAGGCAGATGGAGGCTTaGTGGAGACAGTACCAAATCACACAAACTGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: LCEGVTSRQMEA*WRQYQITQTVD Trigger: GTCTACAGTTTGTGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTGCCTGGATGTGACTCCCTCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| 3UTR TCA 72 bp | CAGATTAAAAAGAACAAGAGCCAGATGTGCACTGAGTaGTGCTTCCAGACCTATAGGTGGCATGAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QIKKNKSQMCTE*CFQTYRWHEQW Trigger: CCACTGCTCATGCCACCTATAGGTCTGGAAGCATCACTCAGTGCACATCTGGCTCTTGTTCTTTTTAATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCCCTCATGCAGTGCAGTaGGGCCCCCGGGGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTPHAVQ*GPRGHC Trigger: ACAGTGCCCCCGGGGGCCGCACTGCACTGCATGAGG...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGTGGCGGCAGGCCAGGTaGAGGGGCCGCTGCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLWRQAR*RGRCLS Trigger: GGACAAGCAGCGGCCCCTGCACCTGGCCTGCCGCCA...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCGCAGAAAGCGGAGCATaGGCGGTGGCAGGGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTAESGA*AVAGEG Trigger: GCCTTCCCCTGCCACCGCGCATGCTCCGCTTTCTGC...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR CCA 90 bp | CCGGGGGTTACTTTGTCTTCCACATCTGTGAACCCTGTCCCAGGGGCTTTCCCAGGGCACTGTCCGGCTTaGCTCGACGCCTCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGVTLSSTSVNPVPGAFPGHCPA*LDASAA Trigger: TGCTGCTGAGGCGTCGAGCCAAGCCGGACAGTGCCC...TGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR TCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCAGACAGCCCTCCAGGTaGCTGCGGAGCGCACAACGG | + |
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Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCRQPSR*LRSAQR Trigger: CCGTTGTGCGCTCCGCAGTCACCTGGAGGGCTGTCT...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCAGCACCTTGGGGAGTaGCCCTGGCCAGACTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCQHLGE*PWPDSD Trigger: GTCCGAGTCTGGCCAGGGGCACTCCCCAAGGTGCTG...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAGCTCTCCCTGGTCCCTaGACTCCTCTGGGGACCAAC | + |
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Preference number: 4 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPALPGP*TPLGTN Trigger: GTTGGTCCCCAGAGGAGTGCAGGGACCAGGGAGAGC...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCGTGGCCACGGCTGGCTaGCACATGCAGTGGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCVATAG*HMQWSG Trigger: ACCACTCCACTGCATGTGGCAGCCAGCCGTGGCCAC...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCACAGGCCTCATGCAGTaGAGTGCGGCCCCCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLTGLMQ*SAAPGG Trigger: GCCCCCGGGGGCCGCACTGCACTGCATGAGGCCTGT...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAGGCCCCCGGCAGAGATaGAAAGGGCGTTTGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPGPRQR*KGRLPS Trigger: GGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCC...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTAGGTGCAGGGGCCGCTaGTTGTCCTGGTTGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLPRTNTCTIALGFSLEIRCRGR*LSWLAA Trigger: TGCCGCCAACCAGGACAAGCAGCGGCCCCTGCACCT...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | CCGGGGGTTACTTTGTCTTCCACATCTGTGAACCCTGTCCCAGGGGCTTTCCCATGCAGCGACCTGGGCTaGCTCACCAAGGCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PGVTLSSTSVNPVPGAFPCSDLG*LTKAKR Trigger: CCTCTTTGCCTTGGTGAGGCAGCCCAGGTCGCTGCA...TGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR GCA 90 bp | AGGCTATTAACCACTGCATGTGAGGAGAGGAGGCAGGTTGGCCTGGGACCTGTTGCACAACGGCAGAGATaGTGCAGCGACCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLLTTACEERRQVGLGPVAQRQR*CSDLGC Trigger: GCAGCCCAGGTCGCTGCAGCATCTCTGCCGTTGTGC...AACAGGTCCCAGGCCAACCTGCCTCCTCTCCTCACATGCAGTGGTTAATAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS-3UTR CCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCAGCGATCCAGCACCTTaGGGAGTGCCCCTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCSDPAP*GVPLAR Trigger: TCTGGCCAGGGGCACTCCCCAAGGTGCTGGATCGCT...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | CCGGGGGTTACTTTGTCTTCCACATCTGTGAACCCTGTCCCAGGGGCTTTCCCAGATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGVTLSSTSVNPVPGAFPDAAAT*AASPRQ Trigger: TTGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATC...TGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTAGGCGCGGTAGTGCATaGGGCAGACAGCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPRTNTCTIALGFSLEIRRGSA*GRQPSR Trigger: CCTGGAGGGCTGTCTGCCCCATGCACTACCGCGCCT...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | CTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCTCTCAAGTGTGGATGGCGGCATCAGCATCTaGCCCCACAGACAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCITTSRVLIWPLLSSVDGGISI*PHRQQQ Trigger: TTGCTGCTGTCTGTGGGGGCAGATGCTGATGCCGCC...ATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | AGGCTATTAACCACTGCATGTGAGGAGAGGAGGCAGGTTGGCCTGGGACCTGTTAGGGCTGTGGGCCACTaGTGTAGTTGGACCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLTTACEERRQVGLGPVRAVGH*CSWTEQ Trigger: CTGCTCGGTCCAACTACAGCAGTGGCCCACAGCCCT...AACAGGTCCCAGGCCAACCTGCCTCCTCTCCTCACATGCAGTGGTTAATAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGGCCAGAAGGCAAGGGTaGGTCCTGAAGCCGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLARRQG*VLKPSG Trigger: TCCGCTCGGCTTCAGGACCCACCCTTGCCTTCTGGC...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCACAGGCAGCATGACCTaGAGAACAGGCCTCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTTGSMT*RTGLMQ Trigger: CTGCATGAGGCCTGTTCTGCAGGTCATGCTGCCTGT...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCCCGAGCAGAGCACAGTaGAGAGGCGTGTGTCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLPSRAQ*RGVCPP Trigger: CGGGGGACACACGCCTCTGCACTGTGCTCTGCTCGG...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGGACCTCGATGGTCCGTaGGGACATGCACCAGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLDLDGP*GHAPAI Trigger: GATCGCTGGTGCATGTCCCCACGGACCATCGAGGTC...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAGTGGCACCAAGCCCTTaGCCTCCTCAGGAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPVAPSP*PPQEAE Trigger: TTCAGCTTCCTGAGGAGGCCAAGGGCTTGGTGCCAC...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAACAAGTACTGCCTaGCAGAAGGCAAGGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCPTSTA*QKARVG Trigger: ACCCACCCTTGCCTTCTGGCAGGCAGTACTTGTTGG...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCAGATGGAGGCTTGCTGGAGACAGTACCAAATCACACAAACTGTAGACCAACGGCAGAGATGCTaGAGCGACCTGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQMEACWRQYQITQTVDQRQRC*SDLGCL Trigger: GAGGCAGCCCAGGTCGCTGCAGCATCTCTGCCGTTG...GTCTACAGTTTGTGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCCAGTGTGGCCACGGCTaGCTGCCACATGCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLQCGHG*LPHAVE Trigger: CTCCACTGCATGTGGCAGCCAGCCGTGGCCACACTG...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | CTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCTCTCAAGTGTGGATTCTGCTAGTTCCACATaGCCAAGCCGGGCAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LCITTSRVLIWPLLSSVDSASST*PSRAAM Trigger: CATAGCTGCCCGGCTTGGCCATGTGGAACTAGCAGA...ATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTAACAGCGGTTGGTGGTaGCCTCAGCATCCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPRTNTCTIALGFSLEINSGWW*PQHPLG Trigger: CCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTT...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGGTGTGCTCAGGGCTGTaGGCCACTGCTGTAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLVCSGL*ATAVVG Trigger: TCCAACTACAGCAGTGGCCCACAGCCCTGAGCACAC...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR TCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCCGGACACAGGCAGCATaGCCTGCAGAACAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLRTQAA*PAEQAS Trigger: TGAGGCCTGTTCTGCAGGTCATGCTGCCTGTGTCCG...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCATCCCCAACAAGTACTaGCTGCCAGAAGGCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCIPNKY*LPEGKG Trigger: ACCCTTGCCTTCTGGCAGGCAGTACTTGTTGGGGAT...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | CCGGGGGTTACTTTGTCTTCCACATCTGTGAACCCTGTCCCAGGGGCTTTCCCAATCGCTCTGGGTCGCTaGTATCAAAGATGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVTLSSTSVNPVPGAFPIALGR*YQRWNR Trigger: CCGATTCCATCTTTGATACCAGCGACCCAGAGCGAT...TGGGAAAGCCCCTGGGACAGGGTTCACAGATGTGGAAGACAAAGTAACCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCCCACATGCAGTGGAGTaGTCAGCTCCTCTTCATATG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTPHAVE*SAPLHM Trigger: CATATGAAGAGGAGCTGACCACTCCACTGCATGTGG...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTTCAAGAACTTCAGTGTaGCCACGGCTGGCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CLPRTNTCTIALGFSLEISRTSV*PRLAAT Trigger: TGTGGCAGCCAGCCGTGGCCACACTGAAGTTCTTGA...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCAGATGGAGGCTTGCTGGAGACAGTACCAAATCACACAAACTGTAGACGCTGCTTGTCCTGGTTaGCGGCATCAGCATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQMEACWRQYQITQTVDAACPG*RHQHLP Trigger: GGGCAGATGCTGATGCCGCCAACCAGGACAAGCAGC...GTCTACAGTTTGTGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCAGATGGAGGCTTGCTGGAGACAGTACCAAATCACACAAACTGTAGACGGCTGCCACATGCAGTaGAGTGGTCAGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQMEACWRQYQITQTVDGCHMQ*SGQLLF Trigger: GAAGAGGAGCTGACCACTCCACTGCATGTGGCAGCC...GTCTACAGTTTGTGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCTCATCAGGACCTCGATaGTCCGTGGGGACATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLSSGPR*SVGTCT Trigger: GGTGCATGTCCCCACGGACCATCGAGGTCCTGATGA...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR TCA 90 bp | CTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCTCTCAAGTGTGGATTCAAAGCACGGATGTTaGAGCGGTAATCTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LCITTSRVLIWPLLSSVDSKHGC*SGNLSI Trigger: GATGGAGAGATTACCGCTTCAACATCCGTGCTTTGA...ATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCAGATGGAGGCTTGCTGGAGACAGTACCAAATCACACAAACTGTAGACAGCCGGGCAGCTATGTaGAGAGGGGTCTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQMEACWRQYQITQTVDSRAAM*RGVSSS Trigger: TGAAGAAGAGACCCCTCTGCACATAGCTGCCCGGCT...GTCTACAGTTTGTGTGATTTGGTACTGTCTCCAGCAAGCCTCCATCTGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCGTCCCTGCACTCCTCTaGGGACCAACTCATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLVPALL*GPTHEH Trigger: ATGCTCATGAGTTGGTCCCCAGAGGAGTGCAGGGAC...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAATCTCTCCATCGCTCTaGGTCGCTGGTATCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPISPSL*VAGIKD Trigger: ATCTTTGATACCAGCGACCCAGAGCGATGGAGAGAT...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCCGCTGGTATCAAAGATaGAATCGGGAGCCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLRWYQR*NREPDQ Trigger: CTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCG...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR GCA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCCCGACCATCCACTTGTaGTCCAAACTTCAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLPTIHL*SKLQEQ Trigger: TTGCTCCTGAAGTTTGGAGCACAAGTGGATGGTCGG...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS GCA 90 bp | GGGGAAGGCGCGGTAGTGCATGGGGCAGACAGCCCTCCAGGTGACTaGGGAGCGCACAACGGCAGAGATGCTGCAGCGACCTGGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEGAVVHGADSPPGD*GAHNGRDAAATWAA Trigger: GGCAGCCCAGGTCGCTGCAGCATCTCTGCCGTTGTGCGCTCCGCAGTCACCTGGAGGGCTGTCTGCCCCATGCACTACCGCGCCTTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS TCA 90 bp | GGCATTAGCGTTGACACCACAGGACAGGAGCAGCTGTACAACAGCTaGGTGGCCGTGGCGGCAGGCCAGGTGCAGGGGCCGCTGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GISVDTTGQEQLYNS*VAVAAGQVQGPLLV Trigger: GACAAGCAGCGGCCCCTGCACCTGGCCTGCCGCCACGGCCACTCAGCTGTTGTACAGCTGCTCCTGTCCTGTGGTGTCAACGCTAATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS TCA 90 bp | GCACCTTGGGGAGTGCCCCTGGCCAGACTCGGACAGCACCGTGATTaGGTAGATCTCGCACTGTGTGCTCAGGGCTGTGGGCCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: APWGVPLARLGQHRD*VDLALCAQGCGPLL Trigger: CAGCAGTGGCCCACAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
||
| CDS CCA 90 bp | AGGATACCAGGCCCCCGGCAGAGATGCAAAGGGCGTTTGCCATCCTaGTCCAGGGTGTTGGGGTCTGCTCCAGCCACCAACAGCACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RIPGPRQRCKGRLPS*SRVLGSAPATNSTR Trigger: CCGTGTGCTGTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS TCA 90 bp | TCCAGCACCTTGGGGAGTGCCCCTGGCCAGACTCGGACAGCACCGTaGTTGAGTAGATCTCGCACTGTGTGCTCAGGGCTGTGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSTLGSAPGQTRTAP*LSRSRTVCSGLWAT Trigger: AGTGGCCCACAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGGTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
||
| CDS GCA 90 bp | CACACTCGAGGATACCAGGCCCCCGGCAGAGATGCAAAGGGCGTTTaGCATCCTGGTCCAGGGTGTTGGGGTCTGCTCCAGCCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: HTRGYQAPGRDAKGV*HPGPGCWGLLQPPT Trigger: TGTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCCTCGAGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS-3UTR CAA 90 bp | TCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCGGGGCACTGTCCGGCTaGGCTCGACGCCTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLQPLTTSFSLHTPLSCGALSG*ARRLSS Trigger: GCTGCTGAGGCGTCGAGCCAAGCCGGACAGTGCCCC...GCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS TCA 90 bp | ACTTCTTGGGGAGTGCCCCTGGCCAGACTCGGACAGCACCGTGATTaGGTAGATCTCGCACTGTGTGCTCAGGGCTGTGGGCCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSWGVPLARLGQHRD*VDLALCAQGCGPLL Trigger: CAGCAGTGGCCCACAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119657.2 |
||
| CDS GCA 90 bp | GAGATGCAAAGGGCGTTTGCCATCCTGGTCCAGGGTGTTGGGGTCTaGTCCAGCCACCAACAGCACACGGACACAGGCAGCATGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EMQRAFAILVQGVGV*SSHQQHTDTGSMTC Trigger: GCAGGTCATGCTGCCTGTGTCCGTGTGCTGTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS GCA 90 bp | AGGAGCAACTCCACACACTCGAGGATACCAGGCCCCCGGCAGAGATaGAAAGGGCGTTTGCCATCCTGGTCCAGGGTGTTGGGGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSNSTHSRIPGPRQR*KGRLPSWSRVLGSA Trigger: AGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCCTCGAGTGTGTGGAGTTGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS CCA 90 bp | TCCGGCTTGGCTCGACGCCTCAGCAGCAACTCAAGAACTTCAGTGTaGCCACGGCTGGCTGCCACATGCAGTGGAGTGGTCAGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLARRLSSNSRTSV*PRLAATCSGVVSSS Trigger: AGAGGAGCTGACCACTCCACTGCATGTGGCAGCCAGCCGTGGCCACACTGAAGTTCTTGAGTTGCTGCTGAGGCGTCGAGCCAAGCCGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS TCA 90 bp | TGGTACTTCTTGGGGAGTGCCCCTGGCCAGACTCGGACAGCACCGTaGTTGAGTAGATCTCGCACTGTGTGCTCAGGGCTGTGGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WYFLGSAPGQTRTAP*LSRSRTVCSGLWAT Trigger: AGTGGCCCACAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGAAGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119657.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCCAAGGACTAACACCTGCACCATTGCTCTGGGCTTCAGCCTAGAGATTCAGCGATCCAGCACCTaGGGGAGTGCCCCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLPRTNTCTIALGFSLEIQRSST*GSAPGQ Trigger: CTGGCCAGGGGCACTCCCCAAGGTGCTGGATCGCTG...AATCTCTAGGCTGAAGCCCAGAGCAATGGTGCAGGTGTTAGTCCTTGGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS TCA 90 bp | GTACAGTGCATTCTGCAGAGCCATGTCACGGCACAGCAGCGGTGGTaGCCCAGGGTTCCTCGGGGCTGGAAAGGACTGAGATCTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VQCILQSHVTAQQRW*PRVPRGWKGLRSPD Trigger: ATCTGGAGATCTCAGTCCTTTCCAGCCCCGAGGAACCCTGGGTCACCACCGCTGCTGTGCCGTGACATGGCTCTGCAGAATGCACTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117900.8 |
||
| CDS GCA 90 bp | CCTGAAGCCGAGCGGATGATGATAGGTCCCAGGCCAGGCTCAAGGTaGTCCTCAGACCCTCTATCAGGCTTCTCTACCAGCTTGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PEAERMMIGPRPGSR*SSDPLSGFSTSLAH Trigger: GTGTGCCAAGCTGGTAGAGAAGCCTGATAGAGGGTCTGAGGAGCACCTTGAGCCTGGCCTGGGACCTATCATCATCCGCTCGGCTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS CCA 90 bp | GCTCAAGGTGCTCCTCAGACCCTCTATCAGGCTTCTCTACCAGCTTaGCACACAGGCTGTATCTGTCACCCTGAGGCTCTCCCTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQGAPQTLYQASLPA*HTGCICHPEALPGP Trigger: GGGACCAGGGAGAGCCTCAGGGTGACAGATACAGCCTGTGTGCCAAGCTGGTAGAGAAGCCTGATAGAGGGTCTGAGGAGCACCTTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS CCA 90 bp | GCGGCACAGTTGAAAACAGCGGTTGGTGGTGGCCTCAGCATCCTTTaGGGATTGACAGCGGATGTCACAGGCAGCCAGCAGTGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAQLKTAVGGGLSIL*GLTADVTGSQQWCP Trigger: TGGACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 90 bp | GCTCTGGGTCGCTGGTATCAAAGATGGAATCGGGAGCCAGACCAGTaGTGGAGTCCGAGAGGATTCGAGAGACAGAGCCCACATCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALGRWYQRWNREPDQ*WSPRGFERQSPHPQ Trigger: TTGGGGATGTGGGCTCTGTCTCTCGAATCCTCTCGGACTCCAGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCGACCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS CCA 90 bp | CCACAGACAGCAGCAAGCGGCACAGTTGAAAACAGCGGTTGGTGGTaGCCTCAGCATCCTTTGGGGATTGACAGCGGATGTCACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQTAASGTVENSGWW*PQHPLGIDSGCHRQ Trigger: CTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTGCTGTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 90 bp | AAGCTGAACTACACGGTATGTATTCATCAGGACCTCGATGGTCCGTaGGGACATGCACCAGCGATCCAGCACCTTGGGGAGTGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLNYTVCIHQDLDGP*GHAPAIQHLGECPW Trigger: CCAGGGGCACTCCCCAAGGTGCTGGATCGCTGGTGCATGTCCCCACGGACCATCGAGGTCCTGATGAATACATACCGTGTAGTTCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
||
| CDS CCA 90 bp | CTGGGTCGCTGGTATCAAAGATGGAATCGGGAGCCAGACCAGTGCTaGAGTCCGAGAGGATTCGAGAGACAGAGCCCACATCCCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LGRWYQRWNREPDQC*SPRGFERQSPHPQQ Trigger: TTGTTGGGGATGTGGGCTCTGTCTCTCGAATCCTCTCGGACTCCAGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS CCA 90 bp | AGCATCCTTTGGGGATTGACAGCGGATGTCACAGGCAGCCAGCAGTaGTGTCCAACCTTCAGAATTGCGGACATCAGGACACGCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SILWGLTADVTGSQQ*CPTFRIADIRTRTP Trigger: TGGGGTGCGTGTCCTGATGTCCGCAATTCTGAAGGTTGGACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 90 bp | CCTCAGGAAGCTGAACTACACGGTATGTATTCATCAGGACCTCGATaGTCCGTGGGGACATGCACCAGCGATCCAGCACCTTGGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQEAELHGMYSSGPR*SVGTCTSDPAPWGV Trigger: CACTCCCCAAGGTGCTGGATCGCTGGTGCATGTCCCCACGGACCATCGAGGTCCTGATGAATACATACCGTGTAGTTCAGCTTCCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
||
| CDS-3UTR CAA 90 bp | CATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCAGGCTTCTCTACCAGCTaGGCACACAGGCTGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLQPLTTSFSLHTPLSCPGFSTS*AHRLYL Trigger: CAGATACAGCCTGTGTGCCAAGCTGGTAGAGAAGCC...TGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CAA 90 bp | TTCCCATCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGAGATGCAAAGGGCGTTaGCCATCCTGGTCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSPAPDHQLLFTHTSVLRCKGR*PSWSRV Trigger: CACCCTGGACCAGGATGGCAAACGCCCTTTGCATCT...CAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGATGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGCCCCTGACCACCAGCTTCTCTTTACACACACCTCTGTCTTGCCCACCAGTCCGACCATCCACTaGTGCTCCAAACTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPAPDHQLLFTHTSVLPTSPTIH*CSKLQE Trigger: CTCCTGAAGTTTGGAGCACAAGTGGATGGTCGGACT...GGTGGGCAAGACAGAGGTGTGTGTAAAGAGAAGCTGGTGGTCAGGGGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCACTACCAGCCGGGTGCTGATCTGGCCTCTTCTCTCAAGTGTGGATCAGCAAGCGGCACAGTaGAAAACAGCGGTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCITTSRVLIWPLLSSVDQQAAQ*KTAVGG Trigger: ACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTG...ATCCACACTTGAGAGAAGAGGCCAGATCAGCACCCGGCTGGTAGTGATGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
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| CDS TCA 90 bp | TGTAGAATCTCTGGTGGCACCAAGCCCTTGGCCTCCTCAGGAAGCTaGACTACACGGTATGTATTCATCAGGACCTCGATGGTCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRISGGTKPLASSGS*TTRYVFIRTSMVRG Trigger: CCCACGGACCATCGAGGTCCTGATGAATACATACCGTGTAGTTCAGCTTCCTGAGGAGGCCAAGGGCTTGGTGCCACCAGAGATTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
||
| CDS GCA 90 bp | GTGCAGAGGGGTCTCTTCTTCATCTTCAGTCCGACCATCCACTTGTaGTCCAAACTTCAGGAGCAACTCCACACACTCGAGGATACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQRGLFFIFSPTIHL*SKLQEQLHTLEDTR Trigger: CCTGGTATCCTCGAGTGTGTGGAGTTGCTCCTGAAGTTTGGAGCACAAGTGGATGGTCGGACTGAAGATGAAGAAGAGACCCCTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 90 bp | AGAAGCAGATCTGCTAGTTCCACATGGCCAAGCCGGGCAGCTATGTaGAGAGGGGTCTCTTCTTCATCTTCAGTCCGACCATCCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRSASSTWPSRAAM*RGVSSSSSVRPSTC Trigger: ACAAGTGGATGGTCGGACTGAAGATGAAGAAGAGACCCCTCTGCACATAGCTGCCCGGCTTGGCCATGTGGAACTAGCAGATCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 90 bp | GAGTCTCAAAGCACGGATGTTGAAGCGGTAATCTCTCCATCGCTCTaGGTCGCTGGTATCAAAGATGGAATCGGGAGCCAGACCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESQSTDVEAVISPSL*VAGIKDGIGSQTSA Trigger: AGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCGACCCAGAGCGATGGAGAGATTACCGCTTCAACATCCGTGCTTTGAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS-3UTR CAA 90 bp | AAGACAAATTCTCACCACATAGCACAATGTGGCCACTCTCCACCCTCCTGTCTCTCCATGGCATTAGCGTaGACACCACAGGACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTNSHHIAQCGHSPPSCLSMALA*TPQDRS Trigger: GCTCCTGTCCTGTGGTGTCAACGCTAATGCCATGGA...GAGACAGGAGGGTGGAGAGTGGCCACATTGTGCTATGTGGTGAGAATTTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048302.13 |
||
| CDS CAA 72 bp | TGGCCGTGGCGGCAGGCCAGGTGCAGGGGCCGCTGCTaGTCCTGGTTGGCGGCATCAGCATCTGCCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WPWRQARCRGRC*SWLAASASAPT Trigger: TGTGGGGGCAGATGCTGATGCCGCCAACCAGGACAAGCAGCGGCCCCTGCACCTGGCCTGCCGCCACGGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | ACACCACAGGACAGGAGCAGCTGTACAACAGCTGAGTaGCCGTGGCGGCAGGCCAGGTGCAGGGGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPQDRSSCTTAE*PWRQARCRGRC Trigger: GCAGCGGCCCCTGCACCTGGCCTGCCGCCACGGCCACTCAGCTGTTGTACAGCTGCTCCTGTCCTGTGGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | GTTGACACCACAGGACAGGAGCAGCTGTACAACAGCTaGGTGGCCGTGGCGGCAGGCCAGGTGCAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VDTTGQEQLYNS*VAVAAGQVQGP Trigger: CGGCCCCTGCACCTGGCCTGCCGCCACGGCCACTCAGCTGTTGTACAGCTGCTCCTGTCCTGTGGTGTCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CAA 90 bp | CAGGCCTCATGCAGTGCAGTGCGGCCCCCGGGGGCACTGTCCGGCTaGGCTCGACGCCTCAGCAGCAACTCAAGAACTTCAGTGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QASCSAVRPPGALSG*ARRLSSNSRTSVWP Trigger: TGGCCACACTGAAGTTCTTGAGTTGCTGCTGAGGCGTCGAGCCAAGCCGGACAGTGCCCCCGGGGGCCGCACTGCACTGCATGAGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | GGCCCCCGGCAGAGATGCAAAGGGCGTTTGCCATCCTaGTCCAGGGTGTTGGGGTCTGCTCCAGCCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GPRQRCKGRLPS*SRVLGSAPATN Trigger: GTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | AGGGCGTTTGCCATCCTGGTCCAGGGTGTTGGGGTCTaGTCCAGCCACCAACAGCACACGGACACAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAFAILVQGVGV*SSHQQHTDTGS Trigger: GCTGCCTGTGTCCGTGTGCTGTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | GGATACCAGGCCCCCGGCAGAGATGCAAAGGGCGTTTaGCATCCTGGTCCAGGGTGTTGGGGTCTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GYQAPGRDAKGV*HPGPGCWGLLQ Trigger: CTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | TGGGGACATGCACCAGCGATCCAGCACCTTGGGGAGTaGCCCTGGCCAGACTCGGACAGCACCGTGATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WGHAPAIQHLGE*PWPDSDSTVIE Trigger: CTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGGTGCTGGATCGCTGGTGCATGTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
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| CDS GCA 72 bp | GCAGATCCTCAAAGTCCAGCTGCAGAAAGCGGAGCATaGGCGGTGGCAGGGGAAGGCGCGGTAGTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADPQSPAAESGA*AVAGEGAVVHG Trigger: CCCATGCACTACCGCGCCTTCCCCTGCCACCGCGCATGCTCCGCTTTCTGCAGCTGGACTTTGAGGATCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CAA 90 bp | ACACACTCGAGGATACCAGGCCCCCGGCAGAGATGCAAAGGGCGTTaGCCATCCTGGTCCAGGGTGTTGGGGTCTGCTCCAGCCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: THSRIPGPRQRCKGR*PSWSRVLGSAPATN Trigger: GTTGGTGGCTGGAGCAGACCCCAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCCTCGAGTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | GGAGTGCCCCTGGCCAGACTCGGACAGCACCGTGATTaGGTAGATCTCGCACTGTGTGCTCAGGGCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVPLARLGQHRD*VDLALCAQGCG Trigger: CCCACAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | CGAGAGACAGAGCCCACATCCCCAACAAGTACTGCCTaGCAGAAGGCAAGGGTGGGTCCTGAAGCCGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RETEPTSPTSTA*QKARVGPEAER Trigger: CCGCTCGGCTTCAGGACCCACCCTTGCCTTCTGGCAGGCAGTACTTGTTGGGGATGTGGGCTCTGTCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | CACTGTGTGCTCAGGGCTGTGGGCCACTGCTGTAGTTaGACCGAGCAGAGCACAGTGCAGAGGCGTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCVLRAVGHCCS*TEQSTVQRRVS Trigger: GGACACACGCCTCTGCACTGTGCTCTGCTCGGTCCAACTACAGCAGTGGCCCACAGCCCTGAGCACACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | TCTACCAGCTTGGCACACAGGCTGTATCTGTCACCCTaGGGCTCTCCCTGGTCCCTGCACTCCTCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: STSLAHRLYLSP*GSPWSLHSSGD Trigger: GTCCCCAGAGGAGTGCAGGGACCAGGGAGAGCCTCAGGGTGACAGATACAGCCTGTGTGCCAAGCTGGTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | CAGCGGTTGGTGGTGGCCTCAGCATCCTTTGGGGATTaGCAGCGGATGTCACAGGCAGCCAGCAGTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRLVVASASFGD*QRMSQAASSGV Trigger: GACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | TTGGGGAGTGCCCCTGGCCAGACTCGGACAGCACCGTaGTTGAGTAGATCTCGCACTGTGTGCTCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSAPGQTRTAP*LSRSRTVCSGL Trigger: CAGCCCTGAGCACACAGTGCGAGATCTACTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | ATTCTGCAGAGCCATGTCACGGCACAGCAGCGGTGGTaGCCCAGGGTTCCTCGGGGCTGGAAAGGACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILQSHVTAQQRW*PRVPRGWKGLR Trigger: TCTCAGTCCTTTCCAGCCCCGAGGAACCCTGGGTCACCACCGCTGCTGTGCCGTGACATGGCTCTGCAGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117900.8 |
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| CDS GCA 72 bp | TCCACACACTCGAGGATACCAGGCCCCCGGCAGAGATaGAAAGGGCGTTTGCCATCCTGGTCCAGGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: STHSRIPGPRQR*KGRLPSWSRVL Trigger: CAACACCCTGGACCAGGATGGCAAACGCCCTTTGCATCTCTGCCGGGGGCCTGGTATCCTCGAGTGTGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | CTTCATATGTCAGAGACCAGAGTCCCCTCTGGTGGCTaGTCCAGCGAGGCTCAGCTGTCCGGCTCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHMSETRVPSGG*SSEAQLSGSPA Trigger: TGCTGGAGAGCCGGACAGCTGAGCCTCGCTGGAGCAGCCACCAGAGGGGACTCTGGTCTCTGACATATGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117900.8 |
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| CDS CCA 72 bp | GCTCGACGCCTCAGCAGCAACTCAAGAACTTCAGTGTaGCCACGGCTGGCTGCCACATGCAGTGGAGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARRLSSNSRTSV*PRLAATCSGVV Trigger: GACCACTCCACTGCATGTGGCAGCCAGCCGTGGCCACACTGAAGTTCTTGAGTTGCTGCTGAGGCGTCGAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CAA 72 bp | ACAGCGGTTGGTGGTGGCCTCAGCATCCTTTGGGGATaGACAGCGGATGTCACAGGCAGCCAGCAGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TAVGGGLSILWG*TADVTGSQQWC Trigger: ACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CAA 90 bp | AGCGGCACAGTTGAAAACAGCGGTTGGTGGTGGCCTCAGCATCCTTaGGGGATTGACAGCGGATGTCACAGGCAGCCAGCAGTGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGTVENSGWWWPQHP*GIDSGCHRQPAVVS Trigger: GGACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS TCA 72 bp | GCATCTGCCCCCACAGACAGCAGCAAGCGGCACAGTTaGAAACAGCGGTTGGTGGTGGCCTCAGCATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASAPTDSSKRHS*KQRLVVASASF Trigger: AAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTGCTGTCTGTGGGGGCAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS GCA 72 bp | GAGCGGATGATGATAGGTCCCAGGCCAGGCTCAAGGTaGTCCTCAGACCCTCTATCAGGCTTCTCTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ERMMIGPRPGSR*SSDPLSGFSTS Trigger: GCTGGTAGAGAAGCCTGATAGAGGGTCTGAGGAGCACCTTGAGCCTGGCCTGGGACCTATCATCATCCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS CAA 72 bp | AGCATCTGCCCCCACAGACAGCAGCAAGCGGCACAGTaGAAAACAGCGGTTGGTGGTGGCCTCAGCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SICPHRQQQAAQ*KTAVGGGLSIL Trigger: AAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTGCTGTCTGTGGGGGCAGATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS GCA 72 bp | CGCTGGTATCAAAGATGGAATCGGGAGCCAGACCAGTaGTGGAGTCCGAGAGGATTCGAGAGACAGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWYQRWNREPDQ*WSPRGFERQSP Trigger: TGGGCTCTGTCTCTCGAATCCTCTCGGACTCCAGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
||
| CDS GCA 72 bp | GAGGGAAGAGTAGAATCCATGGTACTTCTTGGGGAGTaGCCCTGGCCAGACTCGGACAGCACCGTGATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGRVESMVLLGE*PWPDSDSTVIE Trigger: CTCAATCACGGTGCTGTCCGAGTCTGGCCAGGGGCACTCCCCAAGAAGTACCATGGATTCTACTCTTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119657.2 |
||
| CDS CCA 72 bp | TTGAAAACAGCGGTTGGTGGTGGCCTCAGCATCCTTTaGGGATTGACAGCGGATGTCACAGGCAGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LKTAVGGGLSIL*GLTADVTGSQQ Trigger: CTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
||
| CDS CCA 72 bp | ACAGCAGCAAGCGGCACAGTTGAAAACAGCGGTTGGTaGTGGCCTCAGCATCCTTTGGGGATTGACAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: TAASGTVENSGW*WPQHPLGIDSG Trigger: TCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | CAGACAGCAGCAAGCGGCACAGTTGAAAACAGCGGTTaGTGGTGGCCTCAGCATCCTTTGGGGATTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: QTAASGTVENSG*WWPQHPLGIDS Trigger: GCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAACTGTGCCGCTTGCTGCTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | TACACGGTATGTATTCATCAGGACCTCGATGGTCCGTaGGGACATGCACCAGCGATCCAGCACCTTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: YTVCIHQDLDGP*GHAPAIQHLGE Trigger: CTCCCCAAGGTGCTGGATCGCTGGTGCATGTCCCCACGGACCATCGAGGTCCTGATGAATACATACCGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
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| CDS CAA 72 bp | GTTGAAAACAGCGGTTGGTGGTGGCCTCAGCATCCTTaGGGGATTGACAGCGGATGTCACAGGCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VENSGWWWPQHP*GIDSGCHRQPA Trigger: TGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCAAAGGATGCTGAGGCCACCACCAACCGCTGTTTTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | AATCTCTCCATCGCTCTGGGTCGCTGGTATCAAAGATaGAATCGGGAGCCAGACCAGTGCTGGAGTCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: NLSIALGRWYQR*NREPDQCWSPR Trigger: TCTCGGACTCCAGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCAGCGACCCAGAGCGATGGAGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | AACTTCAGTGTGGCCACGGCTGGCTGCCACATGCAGTaGAGTGGTCAGCTCCTCTTCATATGTCAGAGACCA | + |
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Preference number: 6 (lower is better) Translates to: NFSVATAGCHMQ*SGQLLFICQRP Trigger: TGGTCTCTGACATATGAAGAGGAGCTGACCACTCCACTGCATGTGGCAGCCAGCCGTGGCCACACTGAAGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | TGGGGATTGACAGCGGATGTCACAGGCAGCCAGCAGTaGTGTCCAACCTTCAGAATTGCGGACATCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: WGLTADVTGSQQ*CPTFRIADIRT Trigger: TGTCCTGATGTCCGCAATTCTGAAGGTTGGACACCACTGCTGGCTGCCTGTGACATCCGCTGTCAATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | GCTGAACTACACGGTATGTATTCATCAGGACCTCGATaGTCCGTGGGGACATGCACCAGCGATCCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: AELHGMYSSGPR*SVGTCTSDPAP Trigger: AGGTGCTGGATCGCTGGTGCATGTCCCCACGGACCATCGAGGTCCTGATGAATACATACCGTGTAGTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
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| CDS TCA 72 bp | TCTGGTGGCACCAAGCCCTTGGCCTCCTCAGGAAGCTaGACTACACGGTATGTATTCATCAGGACCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SGGTKPLASSGS*TTRYVFIRTSM Trigger: CATCGAGGTCCTGATGAATACATACCGTGTAGTTCAGCTTCCTGAGGAGGCCAAGGGCTTGGTGCCACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
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| CDS CCA 72 bp | TGGTATCAAAGATGGAATCGGGAGCCAGACCAGTGCTaGAGTCCGAGAGGATTCGAGAGACAGAGCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: WYQRWNREPDQC*SPRGFERQSPH Trigger: ATGTGGGCTCTGTCTCTCGAATCCTCTCGGACTCCAGCACTGGTCTGGCTCCCGATTCCATCTTTGATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | AGCACGGATGTTGAAGCGGTAATCTCTCCATCGCTCTaGGTCGCTGGTATCAAAGATGGAATCGGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: STDVEAVISPSL*VAGIKDGIGSQ Trigger: CTGGCTCCCGATTCCATCTTTGATACCAGCGACCCAGAGCGATGGAGAGATTACCGCTTCAACATCCGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS TCA 72 bp | CATATGTCAGAGACCAGAGTCTCAAAGCACGGATGTTaGAGCGGTAATCTCTCCATCGCTCTGGGTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HMSETRVSKHGC*SGNLSIALGRW Trigger: CCAGCGACCCAGAGCGATGGAGAGATTACCGCTTCAACATCCGTGCTTTGAGACTCTGGTCTCTGACATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000119657.2 |
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| CDS CAA 90 bp | TATGTGCAGAGGGGTCTCTTCTTCATCTTCAGTCCGACCATCCACTaGTGCTCCAAACTTCAGGAGCAACTCCACACACTCGAGGATACC | + |
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Preference number: 6 (lower is better) Translates to: YVQRGLFFIFSPTIH*CSKLQEQLHTLEDT Trigger: GGTATCCTCGAGTGTGTGGAGTTGCTCCTGAAGTTTGGAGCACAAGTGGATGGTCGGACTGAAGATGAAGAAGAGACCCCTCTGCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS GCA 72 bp | GGTCTCTTCTTCATCTTCAGTCCGACCATCCACTTGTaGTCCAAACTTCAGGAGCAACTCCACACACTCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLFFIFSPTIHL*SKLQEQLHTLE Trigger: CTCGAGTGTGTGGAGTTGCTCCTGAAGTTTGGAGCACAAGTGGATGGTCGGACTGAAGATGAAGAAGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 ENSMUST00000119657.2 |
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| CDS CCA 72 bp | GGTACTTCTGTAGAATCTCTGGTGGCACCAAGCCCTTaGCCTCCTCAGGAAGCTGAACTACACGGTATGTAT | + |
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Preference number: 6 (lower is better) Translates to: GTSVESLVAPSP*PPQEAELHGMY Trigger: ATACATACCGTGTAGTTCAGCTTCCTGAGGAGGCCAAGGGCTTGGTGCCACCAGAGATTCTACAGAAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048302.13 ENSMUST00000117900.8 |
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