Pregenerated sensors for ASB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026311Ensembl transcript IDs: ENSMUST00000027538.9, ENSMUST00000086843.11, ENSMUST00000186068.2, ENSMUST00000188081.7, ENSMUST00000188879.2, ENSMUST00000190484.7
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTTCCTGTCTGCTGCAGAGCAGACACTGCTCCAGGAACTGGCTaGGCACAGGCCAGAGCAGCTCTCAGGCATGAAGAACTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ALPVCCRADTAPGTG*AQARAALRHEELPS Trigger: GGAGGGAAGTTCTTCATGCCTGAGAGCTGCTCTGGCCTGTGCTCAGCCAGTTCCTGGAGCAGTGTCTGCTCTGCAGCAGACAGGAAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | AGGGCTGCAGTGAGCACGACTTCAGCACAAGCACACAGGCCCCAGTaGACGGGACACTACACACGCCCAACACCAACAGAAGTAGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: RAAVSTTSAQAHRPQ*TGHYTRPTPTEVVD Trigger: GTCCACTACTTCTGTTGGTGTTGGGCGTGTGTAGTGTCCCGTGCACTGGGGCCTGTGTGCTTGTGCTGAAGTCGTGCTCACTGCAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | AAGTGTCTGCAGCCTCGGCACTTCACAGGACCTCAGCAGGGTCCCTaGAAAGGCACAGGAAGAGCTCTTCCTGTCTGCTGCAGAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: KCLQPRHFTGPQQGP*KGTGRALPVCCRAD Trigger: GTCTGCTCTGCAGCAGACAGGAAGAGCTCTTCCTGTGCCTTTCCAGGGACCCTGCTGAGGTCCTGTGAAGTGCCGAGGCTGCAGACACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | GACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATaGCAGAGTCTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: DSQGSSWQHRPWFPG*QSLCQFSLQVIGFH Trigger: GTGGAAGCCGATCACCTGCAGTGAAAACTGACACAGACTCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR GCA 90 bp | GGCACTTCCAGGAATCTCTGTGCGGATGGAAAGTCATCTGATCCCTaGAGGGCAGGATTAGTCTCCAAGTGCCCGGTGTGCAGGCACCAA | + |
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Preference number: 1 (lower is better) Translates to: GTSRNLCADGKSSDP*RAGLVSKCPVCRHQ Trigger: TTGGTGCCTGCACACCGGGCACTTGGAGACTAATCCTGCCCTGCAGGGATCAGATGACTTTCCATCCGCACAGAGATTCCTGGAAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | AGAGGCGCTTCAAAAGCATGTCTAGACTCCTCAGGTCGCGCACAGTaGTCCTCCAGCTTACACTTAGACCCCAGGCCATGGGAAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RGASKACLDSSGRAQ*SSSLHLDPRPWESH Trigger: GTGGCTTTCCCATGGCCTGGGGTCTAAGTGTAAGCTGGAGGACCACTGTGCGCGACCTGAGGAGTCTAGACATGCTTTTGAAGCGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | GGTCGCGCACAGTGGTCCTCCAGCTTACACTTAGACCCCAGGCCATaGGAAAGCCACAATGCCTTTCACCACCAGGAATGCTACTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: GRAQWSSSLHLDPRP*ESHNAFHHQECYLG Trigger: TCCTAAGTAGCATTCCTGGTGGTGAAAGGCATTGTGGCTTTCCCATGGCCTGGGGTCTAAGTGTAAGCTGGAGGACCACTGTGCGCGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR TCA 90 bp | AAACAAGCACTCATTCATCCTCAAACAGGAACTAGAGGGCTGCAGTaGGCACGACTTCAGCACAAGCACACAGGCCCCAGTGCACGGGAC | + |
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Preference number: 1 (lower is better) Translates to: KQALIHPQTGTRGLQ*ARLQHKHTGPSARD Trigger: GTCCCGTGCACTGGGGCCTGTGTGCTTGTGCTGAAGTCGTGCTCACTGCAGCCCTCTAGTTCCTGTTTGAGGATGAATGAGTGCTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | AGAGAACACAGCCGTTTCTTCTTCACTGACAGCCAAGGATCAAGCTaGCAGCACAGGCCATGGTTCCCAGGATGCCAGAGTCTGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: REHSRFFFTDSQGSS*QHRPWFPGCQSLCQ Trigger: CTGACACAGACTCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAGTGAAGAAGAAACGGCTGTGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR GCA 90 bp | GTGCTTCTTACCCCGTACCTCATCCTTGACAGCAATGACATGCAGTaGCTTCATAGCATACTGGCGACAAGGGGAAGTGCCCTCAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: VLLTPYLILDSNDMQ*LHSILATRGSALSP Trigger: TGGACTGAGGGCACTTCCCCTTGTCGCCAGTATGCTATGAAGGCACTGCATGTCATTGCTGTCAAGGATGAGGTACGGGGTAAGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | ACTACAAGCCACCCTTACCCTTTTGCTCGAATGGCTCTCTGTTGGTaGTGCACTGTGGGTCAAGATGATCCAACCGCCCCACAAGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: TTSHPYPFARMALCW*CTVGQDDPTAPQGQ Trigger: TTGACCTTGTGGGGCGGTTGGATCATCTTGACCCACAGTGCAGCACCAACAGAGAGCCATTCGAGCAAAAGGGTAAGGGTGGCTTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | ACTGCAAACAAGCACTCATTCATCCTCAAACAGGAACTAGAGGGCTaGAGTGAGCACGACTTCAGCACAAGCACACAGGCCCCAGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: TANKHSFILKQELEG*SEHDFSTSTQAPVH Trigger: GTGCACTGGGGCCTGTGTGCTTGTGCTGAAGTCGTGCTCACTGCAGCCCTCTAGTTCCTGTTTGAGGATGAATGAGTGCTTGTTTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | CTGCAATCCTGCAATAAGCTCATCTCTCTCACCCACCAACAGCCCTaGGCAGGACAGGGAAAGACCTCTAGAAGCACCCACAAAGGCATT | + |
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Preference number: 1 (lower is better) Translates to: LQSCNKLISLTHQQP*AGQGKTSRSTHKGI Trigger: AATGCCTTTGTGGGTGCTTCTAGAGGTCTTTCCCTGTCCTGCCCAGGGCTGTTGGTGGGTGAGAGAGATGAGCTTATTGCAGGATTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR CCA 90 bp | ACCCTTACCCTTTTGCTCGAATGGCTCTCTGTTGGTGCTGCACTGTaGGTCAAGATGATCCAACCGCCCCACAAGGTCAATCCCAAATCC | + |
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Preference number: 1 (lower is better) Translates to: TLTLLLEWLSVGAAL*VKMIQPPHKVNPKS Trigger: GGATTTGGGATTGACCTTGTGGGGCGGTTGGATCATCTTGACCCACAGTGCAGCACCAACAGAGAGCCATTCGAGCAAAAGGGTAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | GGGCCCACCTGCTGTGACACTCACCACTCAAGAGTTAAACAAACCTaGAATCCTGCAATAAGCTCATCTCTCTCACCCACCAACAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GPTCCDTHHSRVKQT*NPAISSSLSPTNSP Trigger: AGGGCTGTTGGTGGGTGAGAGAGATGAGCTTATTGCAGGATTGCAGGTTTGTTTAACTCTTGAGTGGTGAGTGTCACAGCAGGTGGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR TCA 90 bp | AGTGTCCCTCATGTCCCCACACCACAGAATGCTGTGCAATGTTACTaGAGGAAGGCTGTGAGAAGGAACTCTCTTCAGTTCTGGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: SVPHVPTPQNAVQCY*RKAVRRNSLQFWNQ Trigger: CTGGTTCCAGAACTGAAGAGAGTTCCTTCTCACAGCCTTCCTTCAGTAACATTGCACAGCATTCTGTGGTGTGGGGACATGAGGGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | AAGACAACTCCCAAAATAGAACAGTGGCAGCAAAGAGAAGGGATGTaGACCAGGCAGCATAGACAGACAAACCCAGGCAAGAAAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: KTTPKIEQWQQREGM*TRQHRQTNPGKKAG Trigger: GCCTGCTTTCTTGCCTGGGTTTGTCTGTCTATGCTGCCTGGTGCACATCCCTTCTCTTTGCTGCCACTGTTCTATTTTGGGAGTTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR CCA 90 bp | CCCAGAAGCCATCTTAGACGGAAGACAACTCCCAAAATAGAACAGTaGCAGCAAAGAGAAGGGATGTGCACCAGGCAGCATAGACAGACA | + |
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Preference number: 1 (lower is better) Translates to: PRSHLRRKTTPKIEQ*QQREGMCTRQHRQT Trigger: TGTCTGTCTATGCTGCCTGGTGCACATCCCTTCTCTTTGCTGCCACTGTTCTATTTTGGGAGTTGTCTTCCGTCTAAGATGGCTTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR TCA 90 bp | GCATCCACTACAATCAGACTGTGCCAGGACAGCAGCAGGCAGAGGTaGAAAGAACACTGCTGTGGATCCCAATCAAAAGTGTTTTACATG | + |
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Preference number: 1 (lower is better) Translates to: ASTTIRLCQDSSRQR*KEHCCGSQSKVFYM Trigger: CATGTAAAACACTTTTGATTGGGATCCACAGCAGTGTTCTTTTCACCTCTGCCTGCTGCTGTCCTGGCACAGTCTGATTGTAGTGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR TCA 90 bp | GAAGTAGTGGACGCCATGCAGACACTGCAGGAGAGAACAGGGCACTaGCATTGCATGTCCAAGACAATTAGGTTCATAAATGGCAATCTC | + |
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Preference number: 1 (lower is better) Translates to: EVVDAMQTLQERTGH*HCMSKTIRFINGNL Trigger: GAGATTGCCATTTATGAACCTAATTGTCTTGGACATGCAATGTCAGTGCCCTGTTCTCTCCTGCAGTGTCTGCATGGCGTCCACTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CCA 90 bp | CACAGGCCAGAGCAGCTCTCAGGCATGAAGAACTTCCCTCCGCTCTaGCCCACAGTCAGGACTTTATCTTTCAGGAAATTTTTATCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HRPEQLSGMKNFPPL*PTVRTLSFRKFLSK Trigger: TTTAGATAAAAATTTCCTGAAAGATAAAGTCCTGACTGTGGGCCAGAGCGGAGGGAAGTTCTTCATGCCTGAGAGCTGCTCTGGCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR GCA 90 bp | GACCCCAGGCCATGGGAAAGCCACAATGCCTTTCACCACCAGGAATaGTACTTAGGATCTAAAACTTCCTCATTAATATGTAGCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: DPRPWESHNAFHHQE*YLGSKTSSLICSIH Trigger: GTGGATGCTACATATTAATGAGGAAGTTTTAGATCCTAAGTAGCATTCCTGGTGGTGAAAGGCATTGTGGCTTTCCCATGGCCTGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR TCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGAAGTTTTCACTGCAGGTaGTCGGCTTCCACATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LTAKDQAGSTGHGSQDARSFHCR*SASTLQ Trigger: CTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACT...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCACTGGAACCACCCAGGTaGCCAAGACATTTTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSLEPPR*PRHFPL Trigger: AAGTGGAAAATGTCTTGGTCACCTGGGTGGTTCCAG...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACCCACAAAGGCATTGGGTCAGAAAGTGGGAGGAACAGTCACCCAACACAGCCAAGGATCAAGCTaGCAGCACAGGCCATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: EAPTKALGQKVGGTVTQHSQGSS*QHRPWF Trigger: GAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCT...GTGTTGGGTGACTGTTCCTCCCACTTTCTGACCCAATGCCTTTGTGGGTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACAGCCTTCCTGAGGCACTaGGGTGGGGTTTGGAACTCC | + |
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Preference number: 2 (lower is better) Translates to: TGSQGLSEGQASLTKKATAFLRH*GGVWNS Trigger: GGAGTTCCAAACCCCACCCCAGTGCCTCAGGAAGGC...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CAA 90 bp | CCTGGGCAGGACAGGGAAAGACCTCTAGAAGCACCCACAAAGGCATaGGGTCAGAAAGTGGGAGGAACAGTCACCCAACACCTAGATATC | + |
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Preference number: 2 (lower is better) Translates to: PGQDRERPLEAPTKA*GQKVGGTVTQHLDI Trigger: GATATCTAGGTGTTGGGTGACTGTTCCTCCCACTTTCTGACCCAATGCCTTTGTGGGTGCTTCTAGAGGTCTTTCCCTGTCCTGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR CAA 90 bp | ACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACATTaGGACCAGCTTGGTGTTGCTGCCTTGGGCCTTCCTGAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TVQDWARLIKTHVVH*DQLGVAALGLPEAL Trigger: CAGTGCCTCAGGAAGGCCCAAGGCAGCAACACCAAGCTGGTCCAAATGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGCACTGTGGGTCAAGATGATCCAACCGCCCCACAAGGTCAATCCCAAATGTGACCACCGTAAGTaGACTTCCACTAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GAALWVKMIQPPHKVNPKCDHRK*TSTRKQ Trigger: CTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCACA...TTTGGGATTGACCTTGTGGGGCGGTTGGATCATCTTGACCCACAGTGCAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR TCA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGAGTTTTCACTGCAGGTaGTCGGCTTCCACATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSMAQAPEIESQSKRTQPSFHCR*SASTLQ Trigger: CTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACT...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGAGTTTTCACTGCAGGTaGTCGGCTTCCACATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLSFHCR*SASTLQ Trigger: CTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACT...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGCCATGGTTCCCAGGATaGCAGAGTCTGTGTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLPWFPG*QSLCQF Trigger: AAACTGACACAGACTCTGGCATCCTGGGAACCATGG...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGCTGCACACATTGCCAGGAAGAATCCAAAACAGAGAGACTGAAGAGGAATGGCAGCACAGGCCATaGTTCCCAGGATGCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PMLHTLPGRIQNRETEEEWQHRP*FPGCQS Trigger: ACTCTGGCATCCTGGGAACCATGGCCTGTGCTGCCA...TTCCTCTTCAGTCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| 3UTR-3UTR CCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCAGCCAAGGATCAAGCTaGCAGCACAGGCCATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: FVCASQLTMTQGAFDGPSSQGSS*QHRPWF Trigger: GAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCT...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACCACCGTAAGTGCACTTCCACTAGGAAGCAGTTTTCTCAGGACAGAGACCTCAGGCTCCTTCCTCTaGACCACTAAGCTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VTTVSALPLGSSFLRTETSGSFL*TTKLFC Trigger: GCAGAAGAGCTTAGTGGTCCAGAGGAAGGAGCCTGA...GGTCTCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCACCGTAAGTGCACTTCCACTAGGAAGCAGTTTTCTCAGGACAGAGACCTGTATGGGAGTGTCTaGAGAGAGCACCCGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CDHRKCTSTRKQFSQDRDLYGSV*REHPCH Trigger: ATGACACGGGTGCTCTCTTCAGACACTCCCATACAG...GTCTCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACAACTACAATCAGACTGTaGCAGGACAGCAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TGSQGLSEGQASLTKKATTTIRL*QDSSRQ Trigger: CTGCCTGCTGCTGTCCTGGCACAGTCTGATTGTAGT...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACAGTTGGTGCTGCACTGTaGGTCAAGATGATCCAACCG | + |
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Preference number: 2 (lower is better) Translates to: TGSQGLSEGQASLTKKATVGAAL*VKMIQP Trigger: CGGTTGGATCATCTTGACCCACAGTGCAGCACCAAC...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACTCACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACAGATGGCCCAAGCACCTaGGATAGAATCACAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HRTHCPGLGKAHQNSCSTDGPST*DRITVQ Trigger: TTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATC...TGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGTGAGTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGGACTCACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACATGGCAGAGCAGATGGTaGCCTATGAACACTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HRTHCPGLGKAHQNSCSTWQSRW*PMNTVL Trigger: CAGAACAGTGTTCATAGGGCACCATCTGCTCTGCCA...TGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGTGAGTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGGACTCACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACACACCCACAAAGGCATTaGGTCAGAAAGTGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HRTHCPGLGKAHQNSCSTHPQRH*VRKWEE Trigger: TTCCTCCCACTTTCTGACCCAATGCCTTTGTGGGTG...TGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGTGAGTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR CAA 90 bp | GTGTCTGTTAAGGCTACGGCAGTTCCCCGCATTCTCCTCACTCCATaGTCCTATGTCAGGCTGGAGTGTATAGTAAATTCCACAGATCAC | + |
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Preference number: 2 (lower is better) Translates to: VSVKATAVPRILLTP*SYVRLECIVNSTDH Trigger: GTGATCTGTGGAATTTACTATACACTCCAGCCTGACATAGGACAATGGAGTGAGGAGAATGCGGGGAACTGCCGTAGCCTTAACAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGTCCAGTCAGCTGAGGAAATTTGATTTCCTCAAGTACTACAAGCCACCCCCATGGTTCCCAGGATaGCAGAGTCTGTGTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: RQSSQLRKFDFLKYYKPPPWFPG*QSLCQF Trigger: AAACTGACACAGACTCTGGCATCCTGGGAACCATGG...GGGTGGCTTGTAGTACTTGAGGAAATCAAATTTCCTCAGCTGACTGGACTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACAAGCAATGACATGCAGTaGCTTCATAGCATACTGGCG | + |
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Preference number: 2 (lower is better) Translates to: TGSQGLSEGQASLTKKATSNDMQ*LHSILA Trigger: CGCCAGTATGCTATGAAGGCACTGCATGTCATTGCT...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTATGGCATTGCCTTGGCAGGTTTCTGGACATATGTCTAAAAGCCCAATACTGGCAGCACAGGCCATaGTTCCCAGGATGCCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NVWHCLGRFLDICLKAQYWQHRP*FPGCQS Trigger: ACTCTGGCATCCTGGGAACCATGGCCTGTGCTGCCA...GTATTGGGCTTTTAGACATATGTCCAGAAACCTGCCAAGGCAATGCCATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGTCCAGTCAGCTGAGGAAATTTGATTTCCTCAAGTACTACAAGCCACCCACCGGCTGGAAATTCTaGACATGCAGAACCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RQSSQLRKFDFLKYYKPPTGWKF*TCRTLK Trigger: CTTCAAGGTTCTGCATGTTCAGAATTTCCAGCCGGT...GGGTGGCTTGTAGTACTTGAGGAAATCAAATTTCCTCAGCTGACTGGACTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR GCA 90 bp | CACAGGACTCACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACACCATGCTGCACACATTaGCAGGAAGAATCCAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HRTHCPGLGKAHQNSCSTPCCTH*QEESKT Trigger: TGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGG...TGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGTGAGTCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACCACCGTAAGTGCACTTCCACTAGGAAGCAGTTTTCTCAGGACAGAGACTGTATGGCATTGCCTTaGCAGGTTTCTGGACATATG | + |
|
Preference number: 2 (lower is better) Translates to: CDHRKCTSTRKQFSQDRDCMALP*QVSGHM Trigger: CATATGTCCAGAAACCTGCCAAGGCAATGCCATACA...GTCTCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGCAGTCCAGTCAGCTGAGGAAATTTGATTTCCTCAAGTACTACAAGCCACCCCAAAATGTATGGCATTaGCTTGGCAGGTTTCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RQSSQLRKFDFLKYYKPPQNVWH*LGRFLD Trigger: GTCCAGAAACCTGCCAAGGCAATGCCATACATTTTG...GGGTGGCTTGTAGTACTTGAGGAAATCAAATTTCCTCAGCTGACTGGACTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR GCA 90 bp | CTACAAAATGTATGGCATTGCCTTGGCAGGTTTCTGGACATATGTCTAAAAGCCCCCAAGGCTACCAACTaGCTGACTGGTCAGCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQNVWHCLGRFLDICLKAPKATN*LTGQLK Trigger: TTTTAGCTGACCAGTCAGGCAGTTGGTAGCCTTGGG...GGCTTTTAGACATATGTCCAGAAACCTGCCAAGGCAATGCCATACATTTTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGCACGAACCGAATTCCTTCTCCCTATATCTTTTCTTAACAAACCTCTTTCTGCCATGGTTCCCAGGATaGCAGAGTCTGTGTCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VHEPNSFSLYLFLTNLFLPWFPG*QSLCQF Trigger: AAACTGACACAGACTCTGGCATCCTGGGAACCATGG...CAGAAAGAGGTTTGTTAAGAAAAGATATAGGGAGAAGGAATTCGGTTCGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGTCAGTCCAGGGCACTGCAAACAAGCACTCATTCATCCTCAAACAGGAAAAAAGAACACTGCTGTaGATCCCAATCAAAAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SKSVQGTANKHSFILKQEKRTLL*IPIKSV Trigger: AACACTTTTGATTGGGATCCACAGCAGTGTTCTTTT...TTCCTGTTTGAGGATGAATGAGTGCTTGTTTGCAGTGCCCTGGACTGACTTGCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR CCA 90 bp | TATGGCCAAAAGTCTAAACAGATTTATTACCTGCTTGTCCCAAATATTCTCAAGTTTCCACTTCCTGTATaGGAGTGTCTGAAGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YGQKSKQIYYLLVPNILKFPLPV*ECLKRA Trigger: TGCTCTCTTCAGACACTCCCATACAGGAAGTGGAAA...CTTGAGAATATTTGGGACAAGCAGGTAATAAATCTGTTTAGACTTTTGGCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR-3UTR TCA 90 bp | TATGGCCAAAAGTCTAAACAGATTTATTACCTGCTTGTCCCAAATATTCTCAAGCCAAAACAGAGAGACTaGAGAGGAACAAAATTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: YGQKSKQIYYLLVPNILKPKQRD*RGTKLS Trigger: ACTTAATTTTGTTCCTCTTCAGTCTCTCTGTTTTGG...CTTGAGAATATTTGGGACAAGCAGGTAATAAATCTGTTTAGACTTTTGGCCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR CCA 72 bp | CAGCCTCGGCACTTCACAGGACCTCAGCAGGGTCCCTaGAAAGGCACAGGAAGAGCTCTTCCTGTCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QPRHFTGPQQGP*KGTGRALPVCC Trigger: GCAGCAGACAGGAAGAGCTCTTCCTGTGCCTTTCCAGGGACCCTGCTGAGGTCCTGTGAAGTGCCGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | AGGAAGAGCTCTTCCTGTCTGCTGCAGAGCAGACACTaGTCCAGGAACTGGCTGAGCACAGGCCAGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKSSSCLLQSRH*SRNWLSTGQSS Trigger: GCTGCTCTGGCCTGTGCTCAGCCAGTTCCTGGAGCAGTGTCTGCTCTGCAGCAGACAGGAAGAGCTCTTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | AAGCTATCCAGGAGCCAGCCCCTCCCACTTGAACTGTaGACACAGCTGCACGGGGAGGCTATAAGAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KLSRSQPLPLEL*TQLHGEAIRGS Trigger: CGAGCCTCTTATAGCCTCCCCGTGCAGCTGTGTGCACAGTTCAAGTGGGAGGGGCTGGCTCCTGGATAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | TTTGGACCAGCTTGGTGTTGCTGCCTTGGGCCTTCCTaGGGCACTGGGGTGGGGTTTGGAACTCCATCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FGPAWCCCLGPS*GTGVGFGTPST Trigger: TGTGGATGGAGTTCCAAACCCCACCCCAGTGCCTCAGGAAGGCCCAAGGCAGCAACACCAAGCTGGTCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | GTCTGCTGCAGAGCAGACACTGCTCCAGGAACTGGCTaGGCACAGGCCAGAGCAGCTCTCAGGCATGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCCRADTAPGTG*AQARAALRHEE Trigger: TTCTTCATGCCTGAGAGCTGCTCTGGCCTGTGCTCAGCCAGTTCCTGGAGCAGTGTCTGCTCTGCAGCAGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | GTGAGCACGACTTCAGCACAAGCACACAGGCCCCAGTaGACGGGACACTACACACGCCCAACACCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSTTSAQAHRPQ*TGHYTRPTPTE Trigger: TTCTGTTGGTGTTGGGCGTGTGTAGTGTCCCGTGCACTGGGGCCTGTGTGCTTGTGCTGAAGTCGTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | GACAGGGAAAGCTACTCAAGTCCAAGTGAAGAGCTGTaGTGGGGCCACACAGAACAGCTGTGGGGAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DRESYSSPSEEL*WGHTEQLWGDR Trigger: CCTGTCTCCCCACAGCTGTTCTGTGTGGCCCCAGCACAGCTCTTCACTTGGACTTGAGTAGCTTTCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | TTTCTCAGGACAGAGACCCCTCCCAAACAAAGTGTCTaGAGCCTCGGCACTTCACAGGACCTCAGCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLRTETPPKQSV*SLGTSQDLSRV Trigger: GACCCTGCTGAGGTCCTGTGAAGTGCCGAGGCTGCAGACACTTTGTTTGGGAGGGGTCTCTGTCCTGAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR CAA 90 bp | TACGGCAGTTCCCCGCATTCTCCTCACTCCATTGTCCTATGTCAGGCTGGAGTGGCACTGGGGTGGGGTTaGGAACTCCATCCACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: YGSSPHSPHSIVLCQAGVALGWG*ELHPQN Trigger: ATTCTGTGGATGGAGTTCCAAACCCCACCCCAGTGC...CACTCCAGCCTGACATAGGACAATGGAGTGAGGAGAATGCGGGGAACTGCCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGACCACCGTAAGTGCACTTCCACTAGGAAGCAGTTTTCTCAGGACAGAGACCCTTGGTGTTGCTGCCTaGGGCCTTCCTGAGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VTTVSALPLGSSFLRTETLGVAA*GLPEAL Trigger: CAGTGCCTCAGGAAGGCCCAAGGCAGCAACACCAAG...GGTCTCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | ACCAAGGAGACACAGGTACCAGCAGACCACCACTGGTaGCATCATCACCAGCATCCTAGGTGCCACTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TKETQVPADHHW*HHHQHPRCHWF Trigger: GAACCAGTGGCACCTAGGATGCTGGTGATGATGTCACCAGTGGTGGTCTGCTGGTACCTGTGTCTCCTTGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | GCCTTCCCCACTAGGGCAATCACCAGGCTCAGCCCATaGTGCACACATTGCCAGGAAGAATCCAAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AFPTRAITRLSP*CTHCQEESKTE Trigger: CTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGGCTGAGCCTGGTGATTGCCCTAGTGGGGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR GCA 72 bp | CACCCTTACCCTTTTGCTCGAATGGCTCTCTGTTGGTaGTGCACTGTGGGTCAAGATGATCCAACCGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPYPFARMALCW*CTVGQDDPTAP Trigger: TGGGGCGGTTGGATCATCTTGACCCACAGTGCAGCACCAACAGAGAGCCATTCGAGCAAAAGGGTAAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CAACCGCCCCACAAGGTCAATCCCAAATCCAGACTGTaGGCTCTCAGCACTGTGACCACCGTAAGTGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: QPPHKVNPKSRL*ALSTVTTVSAL Trigger: AAGTGCACTTACGGTGGTCACAGTGCTGAGAGCCCACAGTCTGGATTTGGGATTGACCTTGTGGGGCGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | AGCCACCCTTACCCTTTTGCTCGAATGGCTCTCTGTTaGTGCTGCACTGTGGGTCAAGATGATCCAACCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHPYPFARMALC*CCTVGQDDPTA Trigger: GGCGGTTGGATCATCTTGACCCACAGTGCAGCACCAACAGAGAGCCATTCGAGCAAAAGGGTAAGGGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CAGTGGTCCTCCAGCTTACACTTAGACCCCAGGCCATaGGAAAGCCACAATGCCTTTCACCACCAGGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: QWSSSLHLDPRP*ESHNAFHHQEC Trigger: GCATTCCTGGTGGTGAAAGGCATTGTGGCTTTCCCATGGCCTGGGGTCTAAGTGTAAGCTGGAGGACCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | TCAAAAGCATGTCTAGACTCCTCAGGTCGCGCACAGTaGTCCTCCAGCTTACACTTAGACCCCAGGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SKACLDSSGRAQ*SSSLHLDPRPW Trigger: CCATGGCCTGGGGTCTAAGTGTAAGCTGGAGGACCACTGTGCGCGACCTGAGGAGTCTAGACATGCTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | CTCATTCATCCTCAAACAGGAACTAGAGGGCTGCAGTaGGCACGACTTCAGCACAAGCACACAGGCCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LIHPQTGTRGLQ*ARLQHKHTGPS Trigger: ACTGGGGCCTGTGTGCTTGTGCTGAAGTCGTGCTCACTGCAGCCCTCTAGTTCCTGTTTGAGGATGAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | ACCCCGTACCTCATCCTTGACAGCAATGACATGCAGTaGCTTCATAGCATACTGGCGACAAGGGGAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TPYLILDSNDMQ*LHSILATRGSA Trigger: GGCACTTCCCCTTGTCGCCAGTATGCTATGAAGGCACTGCATGTCATTGCTGTCAAGGATGAGGTACGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | CAGGATGCCAGAGTCTGTGTCAGTTTTCACTGCAGGTaGTCGGCTTCCACATTGCAGTCAGCACTGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QDARVCVSFHCR*SASTLQSALHV Trigger: CACATGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAGACTCTGGCATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| 3UTR TCA 72 bp | ACTGGTTTGAGACAGGGAAAGCTACTCAAGTCCAAGTaGAGAGCTGTGCTGGGGCCACACAGAACAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGLRQGKLLKSK*RAVLGPHRTAV Trigger: CACAGCTGTTCTGTGTGGCCCCAGCACAGCTCTTCACTTGGACTTGAGTAGCTTTCCCTGTCTCAAACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | CAGCATCCTAGGTGCCACTGGTTCCCAAGGCCTGAGTaGAGGACAAGCAAGTCTTACCAAAAAGGCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: QHPRCHWFPRPE*RTSKSYQKGHT Trigger: AGTGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGTGGCACCTAGGATGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | AGGGCAATCACCAGGCTCAGCCCATGCTGCACACATTaGCAGGAAGAATCCAAAACAGAGAGACTGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAITRLSPCCTH*QEESKTERLKR Trigger: CCTCTTCAGTCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGGCTGAGCCTGGTGATTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR GCA 72 bp | TTCCCCACTAGGGCAATCACCAGGCTCAGCCCATGCTaGACACATTGCCAGGAAGAATCCAAAACAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPTRAITRLSPC*THCQEESKTER Trigger: TCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGGCTGAGCCTGGTGATTGCCCTAGTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR GCA 72 bp | CAGACTGTGGGCTCTCAGCACTGTGACCACCGTAAGTaGACTTCCACTAGGAAGCAGTTTTCTCAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QTVGSQHCDHRK*TSTRKQFSQDR Trigger: TCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCACAGTGCTGAGAGCCCACAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | AAGCACTCATTCATCCTCAAACAGGAACTAGAGGGCTaGAGTGAGCACGACTTCAGCACAAGCACACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KHSFILKQELEG*SEHDFSTSTQA Trigger: GGCCTGTGTGCTTGTGCTGAAGTCGTGCTCACTGCAGCCCTCTAGTTCCTGTTTGAGGATGAATGAGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CAGGGTAAGACATCAGAAAACCCTTGGCAGAGCAGATaGTGCCCTATGAACACTGTTCTGGGACCTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGKTSENPWQSR*CPMNTVLGPLC Trigger: GCACAGAGGTCCCAGAACAGTGTTCATAGGGCACCATCTGCTCTGCCAAGGGTTTTCTGATGTCTTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR CCA 72 bp | TTGACAGCAATGACATGCAGTGCCTTCATAGCATACTaGCGACAAGGGGAAGTGCCCTCAGTCCATGCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTAMTCSAFIAY*RQGEVPSVHAD Trigger: ATCGGCATGGACTGAGGGCACTTCCCCTTGTCGCCAGTATGCTATGAAGGCACTGCATGTCATTGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | AACAGCAACAACCCCACAAATACCCCTTTGATGAGCTaGGACAACCCTCAGGCTCCTTCCTCTGGACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: NSNNPTNTPLMS*DNPQAPSSGPL Trigger: TAGTGGTCCAGAGGAAGGAGCCTGAGGGTTGTCCCAGCTCATCAAAGGGGTATTTGTGGGGTTGTTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CTTTTGCTCGAATGGCTCTCTGTTGGTGCTGCACTGTaGGTCAAGATGATCCAACCGCCCCACAAGGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLEWLSVGAAL*VKMIQPPHKVN Trigger: ATTGACCTTGTGGGGCGGTTGGATCATCTTGACCCACAGTGCAGCACCAACAGAGAGCCATTCGAGCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | TTCTTACCCCGTACCTCATCCTTGACAGCAATGACATaGAGTGCCTTCATAGCATACTGGCGACAAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLPRTSSLTAMT*SAFIAYWRQGE Trigger: TTCCCCTTGTCGCCAGTATGCTATGAAGGCACTGCATGTCATTGCTGTCAAGGATGAGGTACGGGGTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | AAATGGCAGTGTCCCTCATGTCCCCACACCACAGAATaGTGTGCAATGTTACTGAAGGAAGGCTGTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KWQCPSCPHTTE*CAMLLKEGCEK Trigger: CTTCTCACAGCCTTCCTTCAGTAACATTGCACAGCATTCTGTGGTGTGGGGACATGAGGGACACTGCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | AAAAAGGCCACACTTTCTGTGGTGACCTCATGGATCTaGGGTGGTAGAGGCGCTTCAAAAGCATGTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KKATLSVVTSWI*GGRGASKACLD Trigger: GTCTAGACATGCTTTTGAAGCGCCTCTACCACCCCAGATCCATGAGGTCACCACAGAAAGTGTGGCCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | CCCTTTCCAGCAAGCCTTCTGTTGTCAGGAATGACATaGCTGAAGAATAAAAGGCAGTCCAGTCAGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PFPASLLLSGMT*LKNKRQSSQLR Trigger: CCTCAGCTGACTGGACTGCCTTTTATTCTTCAGTCATGTCATTCCTGACAACAGAAGGCTTGCTGGAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | GGCTCTTGGGAGAACCAACTCCCAAACACTGTCCTTTaGTCTCCACATCCACACCATAGCTTATATGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSWENQLPNTVL*SPHPHHSLYVS Trigger: GCTCACATATAAGCTATGGTGTGGATGTGGAGATCAAAGGACAGTGTTTGGGAGTTGGTTCTCCCAAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | CATGTCCCCACACCACAGAATGCTGTGCAATGTTACTaGAGGAAGGCTGTGAGAAGGAACTCTCTTCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HVPTPQNAVQCY*RKAVRRNSLQF Trigger: GAACTGAAGAGAGTTCCTTCTCACAGCCTTCCTTCAGTAACATTGCACAGCATTCTGTGGTGTGGGGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CATCTTAGACGGAAGACAACTCCCAAAATAGAACAGTaGCAGCAAAGAGAAGGGATGTGCACCAGGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLRRKTTPKIEQ*QQREGMCTRQH Trigger: ATGCTGCCTGGTGCACATCCCTTCTCTTTGCTGCCACTGTTCTATTTTGGGAGTTGTCTTCCGTCTAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAACACTGCTGTGGATCCCAATCAAAAGTGTTTTACATGCAAAGCCATAGCGACATCAGAAAACCCTaGGCAGAGCAGATGGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEHCCGSQSKVFYMQSHSDIRKP*AEQMVP Trigger: GGGCACCATCTGCTCTGCCAAGGGTTTTCTGATGTC...GCTATGGCTTTGCATGTAAAACACTTTTGATTGGGATCCACAGCAGTGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | GACAGACAAACCCAGGCAAGAAAGCAGGCTAGCAAGTaGACGAACCGAATTCCTTCTCCCTATATCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRQTQARKQASK*TNRIPSPYIFS Trigger: AGAAAAGATATAGGGAGAAGGAATTCGGTTCGTGCACTTGCTAGCCTGCTTTCTTGCCTGGGTTTGTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR GCA 72 bp | TGCTGTGACACTCACCACTCAAGAGTTAAACAAACCTaGAATCCTGCAATAAGCTCATCTCTCTCACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: CCDTHHSRVKQT*NPAISSSLSPT Trigger: GGTGGGTGAGAGAGATGAGCTTATTGCAGGATTGCAGGTTTGTTTAACTCTTGAGTGGTGAGTGTCACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR GCA 72 bp | TTGGAACTCCATCCACAGAATCCCAAGGCTACCAACTaGCTGACTGGTCAGCTAAAACACAAAATGGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: LELHPQNPKATN*LTGQLKHKMVH Trigger: GTGTACCATTTTGTGTTTTAGCTGACCAGTCAGGCAGTTGGTAGCCTTGGGATTCTGTGGATGGAGTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | CCATCCACAGAATCCCAAGGCTACCAACTGCCTGACTaGTCAGCTAAAACACAAAATGGTACACTAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSTESQGYQLPD*SAKTQNGTLGK Trigger: CTTTCCTAGTGTACCATTTTGTGTTTTAGCTGACCAGTCAGGCAGTTGGTAGCCTTGGGATTCTGTGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | CTAAGAGTCCCTAACCAGTTATACCTACTACTTTATTaGACACCAAGGAACTCTGGGAAGGAGAGCAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRVPNQLYLLLY*TPRNSGKESNE Trigger: CTCGTTGCTCTCCTTCCCAGAGTTCCTTGGTGTGCAATAAAGTAGTAGGTATAACTGGTTAGGGACTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | GTTATACCTACTACTTTATTGCACACCAAGGAACTCTaGGAAGGAGAGCAACGAGGTGAAAATGAGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VIPTTLLHTKEL*EGEQRGENEQG Trigger: CCCTTGCTCATTTTCACCTCGTTGCTCTCCTTCCCAGAGTTCCTTGGTGTGCAATAAAGTAGTAGGTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | TACCTAAGACATAAAGAGGCAGAAGATACAGCTCAGTaGTCGAGTGCTTGTCTTACATGCACAGGATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YLRHKEAEDTAQ*SSACLTCTGSG Trigger: ACCAGATCCTGTGCATGTAAGACAAGCACTCGACCACTGAGCTGTATCTTCTGCCTCTTTATGTCTTAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CCA 72 bp | TTTACCTTCAACTGGCAAAATAAGTCACATATCACATaGGGCACAAATGGCAGTGTCCCTCATGTCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FTFNWQNKSHIT*GTNGSVPHVPT Trigger: TGTGGGGACATGAGGGACACTGCCATTTGTGCCCCATGTGATATGTGACTTATTTTGCCAGTTGAAGGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | AGCTTGCATGTACCCATCTGTGGGACTTTCCTGAGATaGCTAAGAGTCCCTAACCAGTTATACCTACTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SLHVPICGTFLR*LRVPNQLYLLL Trigger: AAGTAGTAGGTATAACTGGTTAGGGACTCTTAGTCATCTCAGGAAAGTCCCACAGATGGGTACATGCAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | AATAAGAGACTGTACACAGAGGAAGCTTCTATTCAGTaGGACACGGGCCACAAAATTAAGGCATGTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NKRLYTEEASIQ*DTGHKIKACGK Trigger: CTTCCCACATGCCTTAATTTTGTGGCCCGTGTCTCACTGAATAGAAGCTTCCTCTGTGTACAGTCTCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | CCATGGGAAAGCCACAATGCCTTTCACCACCAGGAATaGTACTTAGGATCTAAAACTTCCTCATTAATATGT | + |
|
Preference number: 3 (lower is better) Translates to: PWESHNAFHHQE*YLGSKTSSLIC Trigger: ACATATTAATGAGGAAGTTTTAGATCCTAAGTAGCATTCCTGGTGGTGAAAGGCATTGTGGCTTTCCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR GCA 72 bp | TTTATTCAGTTCAGTCACTCCACGCTTATCCCAAATTaGCAGATTTTACCTTCAACTGGCAAAATAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FIQFSHSTLIPN*QILPSTGKISH Trigger: GTGACTTATTTTGCCAGTTGAAGGTAAAATCTGGCAATTTGGGATAAGCGTGGAGTGACTGAACTGAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR TCA 72 bp | TCCAAGACAATTAGGTTCATAAATGGCAATCTCAAGTaGGATTTACAAAAACCCTTCCATTGCTTCATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SKTIRFINGNLK*DLQKPFHCFIY Trigger: GTAAATGAAGCAATGGAAGGGTTTTTGTAAATCTCACTTGAGATTGCCATTTATGAACCTAATTGTCTTGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR GCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCATGCGGTGGTGCCGGCTaGCGTTGGGATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSCGGAG*RWDQHQ Trigger: CTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCA...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGACATGGTACACAGGAGTaGTGCGGTGGTGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTAKDQAGSTGHGSQDARHGTQE*CGGAGC Trigger: GCAGCCGGCACCACCGCAGCACTCCTGTGTACCATG...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGCAGGACAGCATCCATaGCACACCCAGGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPAEARGGPPRVGVADSCAGQHP*HTQGIP Trigger: GGGGATCCCCTGGGTGTGTCATGGATGCTGTCCTGC...ACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGTGCGGTGGTGCCGGCTaGCGTTGGGATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGCGGAG*RWDQHQ Trigger: CTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCA...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | GACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAAGGCCTCCATGGTACACAGGAGTaGTGCGGTGGTGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLELELQTAVSLWEQGLHGTQE*CGGAGC Trigger: GCAGCCGGCACCACCGCAGCACTCCTGTGTACCATG...GAGGCCTTGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGATCCCATGGCCTGCAGTaGCTGCGATCCTCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTAKDQAGSTGHGSQDARSHGLQ*LRSSVV Trigger: CACCACTGAGGATCGCAGCCACTGCAGGCCATGGGA...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGACCCACACGAGAGGCATaGTACACAGGAGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTAKDQAGSTGHGSQDARPTREA*YTGVLR Trigger: CCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGG...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTCACTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGAGCAGGACAGCATCCATaGCACACCCAGGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFTDSQGSSWQHRPWFPGAGQHP*HTQGIP Trigger: GGGGATCCCCTGGGTGTGTCATGGATGCTGTCCTGC...TCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAGTGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGGGCTGCGATCCTCAGTaGTGTGCAGGGAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGGCDPQ*CAGKPA Trigger: GGCTGGCTTCCCTGCACACCACTGAGGATCGCAGCC...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTCACTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGAGGCTGCGATCCTCAGTaGTGTGCAGGGAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFTDSQGSSWQHRPWFPGGCDPQ*CAGKPA Trigger: GGCTGGCTTCCCTGCACACCACTGAGGATCGCAGCC...TCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAGTGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAGGTGCCGGCTGCCGTTaGGATCAGCACCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTGAGCR*DQHQLP Trigger: TGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACC...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | GACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAAGGCCTCTCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DLLELELQTAVSLWEQGLSASCL*AQGFPL Trigger: AAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGA...GAGGCCTTGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCACTTCTTTATGGGGTCTaGCAGCGGCAGCGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSLLYGV*QRQRGN Trigger: GTTCCCTCGCTGCCGCTGCCAGACCCCATAAAGAAG...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | GAAGCACCCACAAAGGCATTGGGTCAGAAAGTGGGAGGAACAGTCACCCAACACGGCTGCGATCCTCAGTaGTGTGCAGGGAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAPTKALGQKVGGTVTQHGCDPQ*CAGKPA Trigger: GGCTGGCTTCCCTGCACACCACTGAGGATCGCAGCC...GTGTTGGGTGACTGTTCCTCCCACTTTCTGACCCAATGCCTTTGTGGGTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGTCCCATGGCCTGCAGTaGCTGCGATCCTCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGSHGLQ*LRSSVV Trigger: CACCACTGAGGATCGCAGCCACTGCAGGCCATGGGA...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCATCCACACAGTTCCCATaGCCTGCAGTGGCTGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSSTQFP*PAVAAI Trigger: GATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGA...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGCCCACACGAGAGGCATaGTACACAGGAGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGPTREA*YTGVLR Trigger: CCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGG...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| 3UTR CAA 72 bp | CTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTaGCAGACAGCTGTGAGCCTCTGGGAACAAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQKPEEDLLELE*QTAVSLWEQGL Trigger: GAGGCCTTGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGLAVGS*GSGGPL Trigger: TAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAG...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACACGGCCCCTTTGCGTATaGGGAAGTCCACACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTRPLCV*GSPHSS Trigger: GGAACTGTGTGGACTTCCTCATACGCAAAGGGGCCG...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGACCTGCAAGAGCAGCCTaGAGCACTGAAGGTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTAKDQAGSTGHGSQDARPARAA*STEGYG Trigger: ACCATAACCTTCAGTGCTTCAGGCTGCTCTTGCAGG...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCACTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGACAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFTDSQGSSWQHRPWFPGQTHEG*FTAMAQ Trigger: CTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTG...TCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAGTGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGACAGTTCCCATGGCCTaGAGTGGCTGCGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGTVPMA*SGCDPQ Trigger: CTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGT...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCTGCGGTGGTGCCGGCTaGCGTTGGGATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVCASQLTMTQGAFDGPSCGGAG*RWDQHQ Trigger: CTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCA...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACATCCACACAGTTCCCATaGCCTGCAGTGGCTGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTSTQFP*PAVAAI Trigger: GATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGA...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGCCCACACGAGAGGCATaGTACACAGGAGTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSMAQAPEIESQSKRTQPPTREA*YTGVLR Trigger: CCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGG...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGGCTGCTTCACAGCCATaGCGCAGGACAGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGAASQP*RRTASM Trigger: CATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGC...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCACAGGGCCATTGCAATTaGAGTCAGGATTTGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSQGHCN*SQDLPQ Trigger: CTGGGGCAAATCCTGACTTCAATTGCAATGGCCCTG...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCCAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTQTHEG*FTAMAQ Trigger: CTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTG...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAGGATGGTCACAGAACTaGTCCCTCAGCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTGWSQN*SLSHSF Trigger: GAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCATCC...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAACATACAGGGCAGTCTaGCCCTTGACATCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTTYRAV*PLTSTR Trigger: CCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGT...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCCATGGTACACAGGAGTaGTGCGGTGGTGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVCASQLTMTQGAFDGPSHGTQE*CGGAGC Trigger: GCAGCCGGCACCACCGCAGCACTCCTGTGTACCATG...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGCTTCTTTATGGGGTCTaGCAGCGGCAGCGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSMAQAPEIESQSKRTQPLLYGV*QRQRGN Trigger: GTTCCCTCGCTGCCGCTGCCAGACCCCATAAAGAAG...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGCAGTGCTCCAGTGGATaGTCACAGAACTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGQCSSG*SQNCSL Trigger: GAGGGAGCAGTTCTGTGACCATCCACTGGAGCACTG...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTCCACACAGTTCCCATaGCCTGCAGTGGCTGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTSTQFP*PAVAAI Trigger: GATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGA...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCGCTGCTTCACAGCCATaGCGCAGGACAGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTAASQP*RRTASM Trigger: CATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGC...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCACTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTALAVGS*GSGGPL Trigger: TAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAG...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGCAGGGCCATTGCAATTaGAGTCAGGATTTGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASERAALIAEPSRGQGHCN*SQDLPQ Trigger: CTGGGGCAAATCCTGACTTCAATTGCAATGGCCCTG...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTGCACACATTGCCAGGAAGAATCCAAAACAGAGAGACTGAAGAGGAAGCAGGACAGCATCCATaGCACACCCAGGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PMLHTLPGRIQNRETEEEAGQHP*HTQGIP Trigger: GGGGATCCCCTGGGTGTGTCATGGATGCTGTCCTGC...TTCCTCTTCAGTCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | GGACAGGGAAAGACCTCTAGAAGCACCCACAAAGGCATTGGGTCAGAAAGTGGGGGATGGTCACAGAACTaGTCCCTCAGCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGKTSRSTHKGIGSESGGWSQN*SLSHSF Trigger: GAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCATCC...CCCACTTTCTGACCCAATGCCTTTGTGGGTGCTTCTAGAGGTCTTTCCCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCGGATGGTCACAGAACTaGTCCCTCAGCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTGWSQN*SLSHSF Trigger: GAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCATCC...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTGCCTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCCTTGTATCGTCACAGTaGTCCAGTGGATGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VVPAEARGGPPRVGVADSLVSSQ*SSGWSQ Trigger: CTGTGACCATCCACTGGAGCACTGTGACGATACAAG...GCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAGGCACTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGAGTCCCCTACATAGGCTaGATCATGGAGTCTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LTAKDQAGSTGHGSQDARVPYIG*IMESCI Trigger: GATACAAGACTCCATGATGCAGCCTATGTAGGGGAC...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGACATACAGGGCAGTCTaGCCCTTGACATCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLTYRAV*PLTSTR Trigger: CCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGT...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTGCCTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCCCAAAAGGATCTCAGTaGTCTCCAAGTGCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAEARGGPPRVGVADSPKGSQ*SPSARS Trigger: TGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGG...GCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAGGCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCATCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTASASCL*AQGFPL Trigger: AAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGA...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGCAGTGCTCCAGTGGATaGTCACAGAACTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLQCSSG*SQNCSL Trigger: GAGGGAGCAGTTCTGTGACCATCCACTGGAGCACTG...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCCAGTGCTCCAGTGGATaGTCACAGAACTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTQCSSG*SQNCSL Trigger: GAGGGAGCAGTTCTGTGACCATCCACTGGAGCACTG...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGCCCACCTGCTGTGACACTCACCACTCAAGAGTTAAACAAACCTGCAATGGTGCCGGCTGCCGTTaGGATCAGCACCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YGPTCCDTHHSRVKQTCNGAGCR*DQHQLP Trigger: TGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACC...ATTGCAGGTTTGTTTAACTCTTGAGTGGTGAGTGTCACAGCAGGTGGGCCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAGGTGCCGGCTGCCGTTaGGATCAGCACCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFVCASQLTMTQGAFDGPGAGCR*DQHQLP Trigger: TGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACC...TGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCAGCTGCTTCACAGCCATaGCGCAGGACAGCATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTAAASQP*RRTASM Trigger: CATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGC...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGTCAGATGATGGTTaGCATCAACATCTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPAEARGGPPRVGVADSCESDDG*HQHLPH Trigger: ATGGGGCAGATGTTGATGTCAACCATCATCTGACTC...ACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCCAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHTCMSVCSACRSQRRTQTHEG*FTAMAQ Trigger: CTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTG...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | AAGGATGCTCAAGGCCGTGGTTATGGGCCCACCTGCTGTGACACTCACCACTCAGATGCAGTCGGTATTTaGCAAGAGCTCTTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KDAQGRGYGPTCCDTHHSDAVGI*QELFSQ Trigger: CTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATC...TGAGTGGTGAGTGTCACAGCAGGTGGGCCCATAACCACGGCCTTGAGCATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | TTCTTCACTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGACCAAAAGGATCTCAGTaGTCTCCAAGTGCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFTDSQGSSWQHRPWFPGPKGSQ*SPSARS Trigger: TGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGG...TCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAGTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACATCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQGLSEGQASLTKKATSASCL*AQGFPL Trigger: AAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGA...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR CCA 90 bp | TATGGGCCCACCTGCTGTGACACTCACCACTCAAGAGTTAAACAAACCTGCAATTCCCATGGCCTGCAGTaGCTGCGATCCTCAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YGPTCCDTHHSRVKQTCNSHGLQ*LRSSVV Trigger: CACCACTGAGGATCGCAGCCACTGCAGGCCATGGGA...ATTGCAGGTTTGTTTAACTCTTGAGTGGTGAGTGTCACAGCAGGTGGGCCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| 3UTR CAA 72 bp | GACAGGGAAAGACCTCTAGAAGCACCCACAAAGGCATaGGGTCAGAAAGTGGGAGGAACAGTCACCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: DRERPLEAPTKA*GQKVGGTVTQH Trigger: GTGTTGGGTGACTGTTCCTCCCACTTTCTGACCCAATGCCTTTGTGGGTGCTTCTAGAGGTCTTTCCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
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| CDS-3UTR TCA 90 bp | ACATTTTCCACTTCCTGTATGGGAGTGTCTGAAGAGAGCACCCGTGTCATCTTCCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TFSTSCMGVSEESTRVIFLAVGS*GSGGPL Trigger: TAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAG...GAAGATGACACGGGTGCTCTCTTCAGACACTCCCATACAGGAAGTGGAAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTGCACACATTGCCAGGAAGAATCCAAAACAGAGAGACTGAAGAGGAACGGCCCCTTTGCGTATaGGGAAGTCCACACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMLHTLPGRIQNRETEEERPLCV*GSPHSS Trigger: GGAACTGTGTGGACTTCCTCATACGCAAAGGGGCCG...TTCCTCTTCAGTCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR TCA 90 bp | GACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAAGGCCTCGTGTCAGGAGTCAGATaGTGGTTGACATCAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLELELQTAVSLWEQGLVSGVR*WLTSTS Trigger: AGATGTTGATGTCAACCATCATCTGACTCCTGACAC...GAGGCCTTGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTCCAGTCAGCTGAGGAAATTTGATTTCCTCAAGTACTACAAGCCACCCCAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSSQLRKFDFLKYYKPPQTHEG*FTAMAQ Trigger: CTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTG...GGGTGGCTTGTAGTACTTGAGGAAATCAAATTTCCTCAGCTGACTGGACTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCCTTGTATCGTCACAGTaGTCCAGTGGATGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCASQLTMTQGAFDGPSTLVSSQ*SSGWSQ Trigger: CTGTGACCATCCACTGGAGCACTGTGACGATACAAG...GGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTGAGCCTCTGGGAACAGTCCCCTACATAGGCTaGATCATGGAGTCTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RGGPPRVGVADSCEPLGTVPYIG*IMESCI Trigger: GATACAAGACTCCATGATGCAGCCTATGTAGGGGAC...TGTTCCCAGAGGCTCACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAACAGTTCCCATGGCCTaGAGTGGCTGCGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFVCASQLTMTQGAFDGPTVPMA*SGCDPQ Trigger: CTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGT...TGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACATACAGGGCAGTCTaGCCCTTGACATCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVCASQLTMTQGAFDGPSTYRAV*PLTSTR Trigger: CCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGT...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTTCCACTTCCTGTATGGGAGTGTCTGAAGAGAGCACCCGTGTCATCTTCTCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TFSTSCMGVSEESTRVIFSASCL*AQGFPL Trigger: AAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGA...GAAGATGACACGGGTGCTCTCTTCAGACACTCCCATACAGGAAGTGGAAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | TACGGCAGTTCCCCGCATTCTCCTCACTCCATTGTCCTATGTCAGGCTGGAGTGAACTCAGCAAGGTCCTaGGAATACTTCTGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YGSSPHSPHSIVLCQAGVNSARS*EYFWPL Trigger: AAGAGGCCAGAAGTATTCCCAGGACCTTGCTGAGTT...CACTCCAGCCTGACATAGGACAATGGAGTGAGGAGAATGCGGGGAACTGCCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCAGCAAAAACTTCTTTATaGGGTCTGGCAGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTAAKTSL*GLAAAA Trigger: CGCTGCCGCTGCCAGACCCCATAAAGAAGTTTTTGC...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCCCTGCAAGAGCAGCCTaGAGCACTGAAGGTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLHTCMSVCSACRSQRRTPARAA*STEGYG Trigger: ACCATAACCTTCAGTGCTTCAGGCTGCTCTTGCAGG...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCCAGGGCCATTGCAATTaGAGTCAGGATTTGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVCASQLTMTQGAFDGPSQGHCN*SQDLPQ Trigger: CTGGGGCAAATCCTGACTTCAATTGCAATGGCCCTG...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCACCACAACACAGAGCTaGGCTCAGGCCACTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLHTCMSVCSACRSQRRTTTTQS*AQATYF Trigger: GAAGTAAGTGGCCTGAGCTCAGCTCTGTGTTGTGGT...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGGATGCAGTCGGTATTTaGCAAGAGCTCTTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLDAVGI*QELFSQ Trigger: CTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATC...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTCCCAAGGCCTGAGTGAAGGACAAGCAAGTCTTACCAAAAAGGCCACAGCAAAAACTTCTTTATaGGGTCTGGCAGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGSQGLSEGQASLTKKATAKTSL*GLAAAA Trigger: CGCTGCCGCTGCCAGACCCCATAAAGAAGTTTTTGC...TGTGGCCTTTTTGGTAAGACTTGCTTGTCCTTCACTCAGGCCTTGGGAACCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CAA 72 bp | GACTGGGCAAGGCTCATCAAAACTCATGTAGTACATTaGGACCAGCTTGGTGTTGCTGCCTTGGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DWARLIKTHVVH*DQLGVAALGLP Trigger: AGGAAGGCCCAAGGCAGCAACACCAAGCTGGTCCAAATGTACTACATGAGTTTTGATGAGCCTTGCCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCAGAGTCAGATGATGGTTaGCATCAACATCTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTAESDDG*HQHLPH Trigger: ATGGGGCAGATGTTGATGTCAACCATCATCTGACTC...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR TCA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGGTGTCAGGAGTCAGATaGTGGTTGACATCAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSMAQAPEIESQSKRTQPVSGVR*WLTSTS Trigger: AGATGTTGATGTCAACCATCATCTGACTCCTGACAC...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAGAGGAACAAAATTAAGTTTGTATGTGCCTCTCAGTTGACAATGACTCAACTTCAGATTAGGACCTaGGGGTCCCGGGCCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKIKFVCASQLTMTQLQIRT*GSRAGP Trigger: CGGGCCGGCCCGGGACCCGCAGGTCCTAATCTGAAG...TTGAGTCATTGTCAACTGAGAGGCACATACAAACTTAATTTTGTTCCTCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | TTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCCCAAAAGGATCTCAGTaGTCTCCAAGTGCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVCASQLTMTQGAFDGPSPKGSQ*SPSARS Trigger: TGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGG...GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGCTTCAGATTAGGACCTaGACTGGAAGAAGATCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSMAQAPEIESQSKRTQPLQIRT*TGRRSE Trigger: TTCGGATCTTCTTCCAGTGCAGGTCCTAATCTGAAG...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188879.2 |
||
| 3UTR CAA 72 bp | ATGAACCTGGGGTGCTTCTTACCCCGTACCTCATCCTaGACAGCAATGACATGCAGTGCCTTCATAGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: MNLGCFLPRTSS*TAMTCSAFIAY Trigger: GTATGCTATGAAGGCACTGCATGTCATTGCTGTCAAGGATGAGGTACGGGGTAAGAAGCACCCCAGGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| 3UTR CAA 72 bp | AAGGCTACGGCAGTTCCCCGCATTCTCCTCACTCCATaGTCCTATGTCAGGCTGGAGTGTATAGTAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KATAVPRILLTP*SYVRLECIVNS Trigger: GGAATTTACTATACACTCCAGCCTGACATAGGACAATGGAGTGAGGAGAATGCGGGGAACTGCCGTAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCAGTGTCAGGAGTCAGATaGTGGTTGACATCAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQFSLQVIGFHIAVSTAVSGVR*WLTSTS Trigger: AGATGTTGATGTCAACCATCATCTGACTCCTGACAC...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCACTTGTATCGTCACAGTaGTCCAGTGGATGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KFVCASQLTMTQGAFDGPLVSSQ*SSGWSQ Trigger: CTGTGACCATCCACTGGAGCACTGTGACGATACAAG...TGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTGTATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAGTCCCCTACATAGGCTaGATCATGGAGTCTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KFVCASQLTMTQGAFDGPVPYIG*IMESCI Trigger: GATACAAGACTCCATGATGCAGCCTATGTAGGGGAC...TGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCCTTCAGATTAGGACCTaGACTGGAAGAAGATCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLHTCMSVCSACRSQRRTLQIRT*TGRRSE Trigger: TTCGGATCTTCTTCCAGTGCAGGTCCTAATCTGAAG...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTGTCCCAAATATTCTCAAGTCTATAATCAGCAAGGTCCACACAGTAATCCTGCAAGAGCAGCCTaGAGCACTGAAGGTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PACPKYSQVYNQQGPHSNPARAA*STEGYG Trigger: ACCATAACCTTCAGTGCTTCAGGCTGCTCTTGCAGG...ATTACTGTGTGGACCTTGCTGATTATAGACTTGAGAATATTTGGGACAAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | GTGCACGAACCGAATTCCTTCTCCCTATATCTTTTCTTAACAAACCTCTTTCTGGATCCATCTTTCTTCTaGCTCTTGCCTCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHEPNSFSLYLFLTNLFLDPSFF*LLPLGP Trigger: TGGGCCCAGAGGCAAGAGGCAGAAGAAAGATGGATC...CAGAAAGAGGTTTGTTAAGAAAAGATATAGGGAGAAGGAATTCGGTTCGTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| CDS-3UTR GCA 90 bp | TATGGCCAAAAGTCTAAACAGATTTATTACCTGCTTGTCCCAAATATTCTCAAGACAGTTCCCATGGCCTaGAGTGGCTGCGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGQKSKQIYYLLVPNILKTVPMA*SGCDPQ Trigger: CTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGT...CTTGAGAATATTTGGGACAAGCAGGTAATAAATCTGTTTAGACTTTTGGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS-3UTR CCA 90 bp | TATGGCCAAAAGTCTAAACAGATTTATTACCTGCTTGTCCCAAATATTCTCAAGCTTCTTTATGGGGTCTaGCAGCGGCAGCGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YGQKSKQIYYLLVPNILKLLYGV*QRQRGN Trigger: GTTCCCTCGCTGCCGCTGCCAGACCCCATAAAGAAG...CTTGAGAATATTTGGGACAAGCAGGTAATAAATCTGTTTAGACTTTTGGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 |
||
| 3UTR CAA 72 bp | AAGAGGAACAAAATTAAGTTTGTATGTGCCTCTCAGTaGACAATGACTCAAGGAGCGTTCGATGGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRNKIKFVCASQ*TMTQGAFDGPS Trigger: GCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACATACAAACTTAATTTTGTTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR GCA 90 bp | AAAGAACACTGCTGTGGATCCCAATCAAAAGTGTTTTACATGCAAAGCCATAGCGATGCAGTCGGTATTTaGCAAGAGCTCTTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KEHCCGSQSKVFYMQSHSDAVGI*QELFSQ Trigger: CTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATC...GCTATGGCTTTGCATGTAAAACACTTTTGATTGGGATCCACAGCAGTGTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR TCA 90 bp | GAATCCAAAACAGAGAGACTGAAGAGGAACAAAATTAAGTTTGTATGTGCCTCTGAGTCAGATGATGGTTaGCATCAACATCTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESKTERLKRNKIKFVCASESDDG*HQHLPH Trigger: ATGGGGCAGATGTTGATGTCAACCATCATCTGACTC...AGAGGCACATACAAACTTAATTTTGTTCCTCTTCAGTCTCTCTGTTTTGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| 3UTR CAA 72 bp | ATGGTCCTTAAGCCTGACATCAGTACTGGTCAATATTaGAAAAATGCCAATTATCTACTTTACCAATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: MVLKPDISTGQY*KNANYLLYQST Trigger: AGTAGATTGGTAAAGTAGATAATTGGCATTTTTCAAATATTGACCAGTACTGATGTCAGGCTTAAGGACCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| CDS GCA 90 bp | ATGGTCACAGAACTGCTCCCTCAGCCACTCCTTCAGATTAGGACCTaGGGGTCCCGGGCCGGCCCGTCCATCGGGGCCGGTCCCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVTELLPQPLLQIRT*GSRAGPSIGAGPAL Trigger: GAGGGCGGGACCGGCCCCGATGGACGGGCCGGCCCGGGACCCGCAGGTCCTAATCTGAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000186068.2 ENSMUST00000190484.7 |
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| CDS GCA 90 bp | CTCGGCCCCTTTGCGTATGAGGAAGTCCACACAGTTCCCATGGCCTaGAGTGGCTGCGATCCTCAGTGGTGTGCAGGGAAGCCAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGPFAYEEVHTVPMA*SGCDPQWCAGKPAA Trigger: TGCGGCTGGCTTCCCTGCACACCACTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGACTTCCTCATACGCAAAGGGGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 90 bp | TCAGGATGTCGTCCCTACCCACACGAGAGGCATGGTACACAGGAGTaGTGCGGTGGTGCCGGCTGCCGTTGGGATCAGCACCAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGCRPYPHERHGTQE*CGGAGCRWDQHQLP Trigger: TGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGGTAGGGACGACATCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CCA 90 bp | TCCACCTCGGCCCCTTTGCGTATGAGGAAGTCCACACAGTTCCCATaGCCTGCAGTGGCTGCGATCCTCAGTGGTGTGCAGGGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STSAPLRMRKSTQFP*PAVAAILSGVQGSQ Trigger: CTGGCTTCCCTGCACACCACTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGACTTCCTCATACGCAAAGGGGCCGAGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 90 bp | TGGGGTCTGGCAGCGGCAGCGAGGGAACCAGATGCAGTCGGTATTTaGCAAGAGCTCTTCTCACAGCCACCCGGCACAAACTCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGLAAAAREPDAVGI*QELFSQPPGTNSAR Trigger: CCTTGCTGAGTTTGTGCCGGGTGGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCCAGACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS GCA 90 bp | GTGCTCTCCAAGTGCCCGTTCACTACAGCCACATACAGGGCAGTCTaGCCCTTGACATCCACCAGGTCCACCTCGGCCCCTTTGCGTATG | + |
|
Preference number: 5 (lower is better) Translates to: VLSKCPFTTATYRAV*PLTSTRSTSAPLRM Trigger: CATACGCAAAGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTTGGAGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 90 bp | CCACACGAGAGGCATGGTACACAGGAGTGCTGCGGTGGTGCCGGCTaGCGTTGGGATCAGCACCAGCTTCCAAAAGGATCTCAGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PHERHGTQECCGGAG*RWDQHQLPKGSQCS Trigger: AGAGCACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CCA 90 bp | CTGATAAGAGCCTTCAGGATGTCGTCCCTACCCACACGAGAGGCATaGTACACAGGAGTGCTGCGGTGGTGCCGGCTGCCGTTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LIRAFRMSSLPTREA*YTGVLRWCRLPLGS Trigger: TGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGGTAGGGACGACATCCTGAAGGCTCTTATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGTGGTGCCGGCTGCCGTaGGGATCAGCACCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGNKASERAALIAEPSRGWCRLP*GSAPAS Trigger: GGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCA...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
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| CDS GCA 90 bp | GCCGGCTGCCGTTGGGATCAGCACCAGCTTCCAAAAGGATCTCAGTaGTCTCCAAGTGCCCGTTCACTACAGCCACATACAGGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGCRWDQHQLPKGSQ*SPSARSLQPHTGQS Trigger: AGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAACGGCAGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGATCTTTCTTCTGCCTCTaGCCTCTGGGCCCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LTAKDQAGSTGHGSQDARSFFCL*PLGPGI Trigger: AATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGA...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCATGGTGCCGGCTGCCGTaGGGATCAGCACCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCQFSLQVIGFHIAVSTAWCRLP*GSAPAS Trigger: GGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCA...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS TCA 90 bp | GGTCCTGGGAATACCTCCGGTAGCTCTCCTCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTACATAGGCTGCATCATGGAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGNTSGSSPLAVGS*GSGGPLHRLHHGVL Trigger: CAAGACTCCATGATGCAGCCTATGTAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAGAGGAGAGCTACCGGAGGTATTCCCAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186068.2 |
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| CDS GCA 90 bp | CAGGTTCAGGTTGGCTCCAAACTCTACCAACAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAGGACAGCATCCATGACACACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVQVGSKLYQQTHEG*FTAMAQDSIHDTPR Trigger: CCTGGGTGTGTCATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CCA 90 bp | CTCTTGCCTCTGGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTTaGCTCCAAACTCTACCAACAGACTCACGAAGGCTGCTTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPLGPGIPTSPGSG*LQTLPTDSRRLLHS Trigger: GCTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAGAGGCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CCA 90 bp | GACCTGCAAGGCCTCAGGATCCATCTTTCTTCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTTGGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLQGLRIHLSSASCL*AQGFPLHQVQVGSK Trigger: TTTGGAGCCAACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS-3UTR CAA 90 bp | GTGCCTGCAGAAGCCAGAGGAGGACCTCCTAGAGTTGGAGTTGCAGACAGCTGTTCTTTCTTCTGCCTCTaGCCTCTGGGCCCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VPAEARGGPPRVGVADSCSFFCL*PLGPGI Trigger: AATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGA...ACAGCTGTCTGCAACTCCAACTCTAGGAGGTCCTCCTCTGGCTTCTGCAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
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| CDS GCA 90 bp | AAAAACTTCTTTATGGGGTCTGGCAGCGGCAGCGAGGGAACCAGATaGAGTCGGTATTTGCCAAGAGCTCTTCTCACAGCCACCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KNFFMGSGSGSEGTR*SRYLPRALLTATRH Trigger: GTGCCGGGTGGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCCAGACCCCATAAAGAAGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | CTGACAGCCAAGGATCAAGCTGGCAGCACAGGCCATGGTTCCCAGGATGCCAGACTGCATCATGGAGTCTaGTATCGTCACAGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTAKDQAGSTGHGSQDARLHHGV*YRHSAP Trigger: TGGAGCACTGTGACGATACAAGACTCCATGATGCAG...TCTGGCATCCTGGGAACCATGGCCTGTGCTGCCAGCTTGATCCTTGGCTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | ATGTGCCTCTCAGTTGACAATGACTCAAGGAGCGTTCGATGGCCCAAGCACCTGTCCACCTCGGCCCCTTaGCGTATGAGGAAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MCLSVDNDSRSVRWPKHLSTSAP*RMRKST Trigger: TGTGGACTTCCTCATACGCAAAGGGGCCGAGGTGGA...CAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTGAGAGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | TATGGGCCCACCTGCTGTGACACTCACCACTCAAGAGTTAAACAAACCTGCAATTGGTGCCGGCTGCCGTaGGGATCAGCACCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YGPTCCDTHHSRVKQTCNWCRLP*GSAPAS Trigger: GGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCA...ATTGCAGGTTTGTTTAACTCTTGAGTGGTGAGTGTCACAGCAGGTGGGCCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
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| CDS GCA 90 bp | TTGGGATCAGCACCAGCTTCCAAAAGGATCTCAGTGCTCTCCAAGTaGCCGTTCACTACAGCCACATACAGGGCAGTCTGCCCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGSAPASKRISVLSK*PFTTATYRAVCPLT Trigger: TGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 90 bp | ACAGAGCTGAGCTCAGGCCACTTACTTCTGGCCTCTTTAAAGACCTaGAAGGCCTCAGGATCCATCTTTCTTCTGCCTCTTGCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TELSSGHLLLASLKT*KASGSIFLLPLASG Trigger: CCCAGAGGCAAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAGGTCTTTAAAGAGGCCAGAAGTAAGTGGCCTGAGCTCAGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCAGTTTTCACTGCAGGTGATCGGCTTCCACATTGCAGTCAGCACTGCATCTTTCTTCTGCCTCTaGCCTCTGGGCCCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LCQFSLQVIGFHIAVSTASFFCL*PLGPGI Trigger: AATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGA...TGCAGTGCTGACTGCAATGTGGAAGCCGATCACCTGCAGTGAAAACTGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCTCCACCTCGGCCCCTTaGCGTATGAGGAAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VLHTCMSVCSACRSQRRTSTSAP*RMRKST Trigger: TGTGGACTTCCTCATACGCAAAGGGGCCGAGGTGGA...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
||
| CDS GCA 90 bp | GAACTCCTGGGTGTTGACAGGGCCATTGCAATTGAAGTCAGGATTTaGCCCAGCCTGCAAGAGCAGCCTGAAGCACTGAAGGTTATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELLGVDRAIAIEVRI*PSLQEQPEALKVMV Trigger: TACCATAACCTTCAGTGCTTCAGGCTGCTCTTGCAGGCTGGGGCAAATCCTGACTTCAATTGCAATGGCCCTGTCAACACCCAGGAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
||
| CDS-3UTR CAA 90 bp | CACAGGACTCACTGTCCAGGACTGGGCAAGGCTCATCAAAACTCATGTAGTACATCTTTCTTCTGCCTCTaGCCTCTGGGCCCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: HRTHCPGLGKAHQNSCSTSFFCL*PLGPGI Trigger: AATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGA...TGTACTACATGAGTTTTGATGAGCCTTGCCCAGTCCTGGACAGTGAGTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
||
| CDS-3UTR CAA 90 bp | CCCATGCTGCACACATTGCCAGGAAGAATCCAAAACAGAGAGACTGAAGAGGAATCCACCTCGGCCCCTTaGCGTATGAGGAAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PMLHTLPGRIQNRETEEESTSAP*RMRKST Trigger: TGTGGACTTCCTCATACGCAAAGGGGCCGAGGTGGA...TTCCTCTTCAGTCTCTCTGTTTTGGATTCTTCCTGGCAATGTGTGCAGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
||
| CDS GCA 90 bp | AAACTCAGCAAGGTCCTGGGAATACTTCTGGCCTCTTTAAAGACCTaGAAGGCCTCAGGATCCATCTTTCTTCTGCCTCTTGCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSKVLGILLASLKT*KASGSIFLLPLASG Trigger: CCCAGAGGCAAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAGGTCTTTAAAGAGGCCAGAAGTATTCCCAGGACCTTGCTGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS-3UTR CAA 90 bp | AGCAAAGAGAAGGGATGTGCACCAGGCAGCATAGACAGACAAACCCAGGCAAGACTGCATCATGGAGTCTaGTATCGTCACAGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKEKGCAPGSIDRQTQARLHHGV*YRHSAP Trigger: TGGAGCACTGTGACGATACAAGACTCCATGATGCAG...TCTTGCCTGGGTTTGTCTGTCTATGCTGCCTGGTGCACATCCCTTCTCTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
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| CDS-3UTR CAA 90 bp | TCTGGGAACAAGGCCTCTGAAAGAGCAGCTCTAATAGCTGAGCCGTCTCGAGGGGTGTTGACAGGGCCATaGCAATTGAAGTCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SGNKASERAALIAEPSRGVLTGP*QLKSGF Trigger: AAATCCTGACTTCAATTGCAATGGCCCTGTCAACAC...CCCTCGAGACGGCTCAGCTATTAGAGCTGCTCTTTCAGAGGCCTTGTTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
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| CDS-3UTR CAA 90 bp | GTTTTACACACATGCATGTCTGTATGTAGTGCCTGCAGAAGCCAGAGGAGGACCCTGCATCATGGAGTCTaGTATCGTCACAGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLHTCMSVCSACRSQRRTLHHGV*YRHSAP Trigger: TGGAGCACTGTGACGATACAAGACTCCATGATGCAG...GGTCCTCCTCTGGCTTCTGCAGGCACTACATACAGACATGCATGTGTGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
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| CDS-3UTR CAA 90 bp | CGTTCGATGGCCCAAGCACCTGAGATAGAATCACAGTCCAAGAGAACACAGCCGGTGTTGACAGGGCCATaGCAATTGAAGTCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RSMAQAPEIESQSKRTQPVLTGP*QLKSGF Trigger: AAATCCTGACTTCAATTGCAATGGCCCTGTCAACAC...CGGCTGTGTTCTCTTGGACTGTGATTCTATCTCAGGTGCTTGGGCCATCGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS-3UTR CAA 90 bp | TGTGACCACCGTAAGTGCACTTCCACTAGGAAGCAGTTTTCTCAGGACAGAGACAGATGCAGTCGGTATTaGCCAAGAGCTCTTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CDHRKCTSTRKQFSQDRDRCSRY*PRALLT Trigger: TGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCT...GTCTCTGTCCTGAGAAAACTGCTTCCTAGTGGAAGTGCACTTACGGTGGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027538.9 |
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| CDS-3UTR CAA 90 bp | ACATTTTCCACTTCCTGTATGGGAGTGTCTGAAGAGAGCACCCGTGTCATCTTCGTGTTGACAGGGCCATaGCAATTGAAGTCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TFSTSCMGVSEESTRVIFVLTGP*QLKSGF Trigger: AAATCCTGACTTCAATTGCAATGGCCCTGTCAACAC...GAAGATGACACGGGTGCTCTCTTCAGACACTCCCATACAGGAAGTGGAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086843.11 |
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| CDS GCA 72 bp | GAACTGCTCCCTCAGCCACTCCTTCAGATTAGGACCTaGGGGTCCCGGGCCGGCCCGTCCATCGGGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ELLPQPLLQIRT*GSRAGPSIGAG Trigger: ACCGGCCCCGATGGACGGGCCGGCCCGGGACCCGCAGGTCCTAATCTGAAGGAGTGGCTGAGGGAGCAGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000186068.2 ENSMUST00000190484.7 |
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| CDS GCA 72 bp | CGTCCCTACCCACACGAGAGGCATGGTACACAGGAGTaGTGCGGTGGTGCCGGCTGCCGTTGGGATCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPYPHERHGTQE*CGGAGCRWDQH Trigger: GTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCATGCCTCTCGTGTGGGTAGGGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS TCA 72 bp | AGGCTGCTTCACAGCCATGGCGCAGGACAGCATCCATaGCACACCCAGGGGATCCCCTGTAGAACTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLHSHGAGQHP*HTQGIPCRTPG Trigger: CCCAGGAGTTCTACAGGGGATCCCCTGGGTGTGTCATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS GCA 72 bp | AAGTGCCCGTTCACTACAGCCACATACAGGGCAGTCTaGCCCTTGACATCCACCAGGTCCACCTCGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KCPFTTATYRAV*PLTSTRSTSAP Trigger: AGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CAA 72 bp | CCGTTCACTACAGCCACATACAGGGCAGTCTGCCCCTaGACATCCACCAGGTCCACCTCGGCCCCTTTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PFTTATYRAVCP*TSTRSTSAPLR Trigger: ACGCAAAGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS TCA 72 bp | CGTTCACTACAGCCACATACAGGGCAGTCTGCCCCTTaGCATCCACCAGGTCCACCTCGGCCCCTTTGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSLQPHTGQSAP*HPPGPPRPLCV Trigger: TACGCAAAGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 72 bp | GCAGCGGCAGCGAGGGAACCAGATGCAGTCGGTATTTaGCAAGAGCTCTTCTCACAGCCACCCGGCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAREPDAVGI*QELFSQPPGTN Trigger: GTTTGTGCCGGGTGGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS GCA 72 bp | AGGCATGGTACACAGGAGTGCTGCGGTGGTGCCGGCTaGCGTTGGGATCAGCACCAGCTTCCAAAAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RHGTQECCGGAG*RWDQHQLPKGS Trigger: AGATCCTTTTGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CCA 72 bp | GCCCCTTTGCGTATGAGGAAGTCCACACAGTTCCCATaGCCTGCAGTGGCTGCGATCCTCAGTGGTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APLRMRKSTQFP*PAVAAILSGVQ Trigger: CTGCACACCACTGAGGATCGCAGCCACTGCAGGCCATGGGAACTGTGTGGACTTCCTCATACGCAAAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CAA 72 bp | GGCAGCGGCAGCGAGGGAACCAGATGCAGTCGGTATTaGCCAAGAGCTCTTCTCACAGCCACCCGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSEGTRCSRY*PRALLTATRHK Trigger: TTTGTGCCGGGTGGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS CAA 72 bp | TGCCCCTTGACATCCACCAGGTCCACCTCGGCCCCTTaGCGTATGAGGAAGTCCACACAGTTCCCATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLTSTRSTSAP*RMRKSTQFPWP Trigger: AGGCCATGGGAACTGTGTGGACTTCCTCATACGCAAAGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CAA 72 bp | TGGTACACAGGAGTGCTGCGGTGGTGCCGGCTGCCGTaGGGATCAGCACCAGCTTCCAAAAGGATCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WYTGVLRWCRLP*GSAPASKRISV Trigger: CACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAACGGCAGCCGGCACCACCGCAGCACTCCTGTGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CAA 90 bp | ATGGGGTCTGGCAGCGGCAGCGAGGGAACCAGATGCAGTCGGTATTaGCCAAGAGCTCTTCTCACAGCCACCCGGCACAAACTCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGSGSGSEGTRCSRY*PRALLTATRHKLSK Trigger: CTTGCTGAGTTTGTGCCGGGTGGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCCAGACCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS CAA 90 bp | TCCAAGTGCCCGTTCACTACAGCCACATACAGGGCAGTCTGCCCCTaGACATCCACCAGGTCCACCTCGGCCCCTTTGCGTATGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKCPFTTATYRAVCP*TSTRSTSAPLRMRK Trigger: CTTCCTCATACGCAAAGGGGCCGAGGTGGACCTGGTGGATGTCAAGGGGCAGACTGCCCTGTATGTGGCTGTAGTGAACGGGCACTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS TCA 72 bp | TGCGGCTCCGGTAGCTCTCCTCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTACATAGGCTGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: CGSGSSPLAVGS*GSGGPLHRLHH Trigger: ATGATGCAGCCTATGTAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAGAGGAGAGCTACCGGAGCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CAA 90 bp | CCTCTTGCCTCTGGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTaGGCTCCAAACTCTACCAACAGACTCACGAAGGCTGCTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PLASGPRDSHFTRFR*APNSTNRLTKAASQ Trigger: CTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAGAGGCAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS GCA 72 bp | TTTATGGGGTCTGGCAGCGGCAGCGAGGGAACCAGATaGAGTCGGTATTTGCCAAGAGCTCTTCTCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FMGSGSGSEGTR*SRYLPRALLTA Trigger: GGCTGTGAGAAGAGCTCTTGGCAAATACCGACTGCATCTGGTTCCCTCGCTGCCGCTGCCAGACCCCATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 |
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| CDS CCA 72 bp | CTGGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTTaGCTCCAAACTCTACCAACAGACTCACGAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGPGIPTSPGSG*LQTLPTDSRRL Trigger: CAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CCA 72 bp | GGCCTCAGGATCCATCTTTCTTCTGCCTCTTGCCTCTaGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLRIHLSSASCL*AQGFPLHQVQV Trigger: AACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAGAGGCAAGAGGCAGAAGAAAGATGGATCCTGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CCA 72 bp | TCTACCAACAGACTCACGAAGGCTGCTTCACAGCCATaGCGCAGGACAGCATCCATGACACACCCAGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: STNRLTKAASQP*RRTASMTHPGD Trigger: ATCCCCTGGGTGTGTCATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS TCA 72 bp | CATACCTCCGGTAGCTCTCCTCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTACATAGGCTGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: HTSGSSPLAVGS*GSGGPLHRLHH Trigger: ATGATGCAGCCTATGTAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAGAGGAGAGCTACCGGAGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190484.7 |
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| CDS GCA 72 bp | GTTGGCTCCAAACTCTACCAACAGACTCACGAAGGCTaGTTCACAGCCATGGCGCAGGACAGCATCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGSKLYQQTHEG*FTAMAQDSIHD Trigger: GTCATGGATGCTGTCCTGCGCCATGGCTGTGAAGCAGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CAA 72 bp | TCTGGGCCCAGGGATTCCCACTTCACCAGGTTCAGGTaGGCTCCAAACTCTACCAACAGACTCACGAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPRDSHFTRFR*APNSTNRLTKA Trigger: AGCCTTCGTGAGTCTGTTGGTAGAGTTTGGAGCCAACCTGAACCTGGTGAAGTGGGAATCCCTGGGCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS TCA 72 bp | AATACCTCCGGTAGCTCTCCTCTTGCAGTAGGTTCCTaGGGGTCTGGAGGTCCCCTACATAGGCTGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: NTSGSSPLAVGS*GSGGPLHRLHH Trigger: ATGATGCAGCCTATGTAGGGGACCTCCAGACCCTCAGGAACCTACTGCAAGAGGAGAGCTACCGGAGGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186068.2 |
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| CDS GCA 72 bp | GGTGTTGACAGGGCCATTGCAATTGAAGTCAGGATTTaGCCCAGCCTGCAAGAGCAGCCTGAAGCACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVDRAIAIEVRI*PSLQEQPEALK Trigger: CTTCAGTGCTTCAGGCTGCTCTTGCAGGCTGGGGCAAATCCTGACTTCAATTGCAATGGCCCTGTCAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS GCA 72 bp | CGTTGGGATCAGCACCAGCTTCCAAAAGGATCTCAGTaGTCTCCAAGTGCCCGTTCACTACAGCCACATACA | + |
|
Preference number: 6 (lower is better) Translates to: RWDQHQLPKGSQ*SPSARSLQPHT Trigger: TGTATGTGGCTGTAGTGAACGGGCACTTGGAGAGCACTGAGATCCTTTTGGAAGCTGGTGCTGATCCCAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS CCA 72 bp | TCATGGAGTCTTGTATCGTCACAGTGCTCCAGTGGATaGTCACAGAACTGCTCCCTCAGCCACTCCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWSLVSSQCSSG*SQNCSLSHSFR Trigger: TCTGAAGGAGTGGCTGAGGGAGCAGTTCTGTGACCATCCACTGGAGCACTGTGACGATACAAGACTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086843.11 ENSMUST00000186068.2 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS CAA 72 bp | TCTGGAGGTCCCCTACATAGGCTGCATCATGGAGTCTaGTATCGTCACAGTGCTCCAGTGGATGGTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGGPLHRLHHGV*YRHSAPVDGHR Trigger: TCTGTGACCATCCACTGGAGCACTGTGACGATACAAGACTCCATGATGCAGCCTATGTAGGGGACCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086843.11 ENSMUST00000186068.2 ENSMUST00000188081.7 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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| CDS GCA 72 bp | GGTGTCAGGAGTCAGATGATGGTTGACATCAACATCTaGCCCATACCTGATAAGAGCCTTCAGGATGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVRSQMMVDINI*PIPDKSLQDVV Trigger: GACGACATCCTGAAGGCTCTTATCAGGTATGGGGCAGATGTTGATGTCAACCATCATCTGACTCCTGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086843.11 ENSMUST00000188081.7 ENSMUST00000188879.2 |
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| CDS GCA 72 bp | AGCTCAGGCCACTTACTTCTGGCCTCTTTAAAGACCTaGAAGGCCTCAGGATCCATCTTTCTTCTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSGHLLLASLKT*KASGSIFLLPL Trigger: AAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAGGTCTTTAAAGAGGCCAGAAGTAAGTGGCCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188081.7 |
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| CDS GCA 72 bp | AAGGTCCTGGGAATACTTCTGGCCTCTTTAAAGACCTaGAAGGCCTCAGGATCCATCTTTCTTCTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVLGILLASLKT*KASGSIFLLPL Trigger: AAGAGGCAGAAGAAAGATGGATCCTGAGGCCTTGCAGGTCTTTAAAGAGGCCAGAAGTATTCCCAGGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027538.9 ENSMUST00000086843.11 ENSMUST00000188879.2 ENSMUST00000190484.7 |
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