RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036995

Ensembl transcript IDs: ENSMUST00000047526.8

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCAGCTGAGGTCAGTCCCGGCCCTGAGCTCAGAGCCATCCCTCTaGAACCTAGCTCTGCTCCTTCCGAGTCAGTTCTTGAGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: DQLRSVPALSSEPSL*NLALLLPSQFLSPA
Trigger: AGCTGGGCTCAAGAACTGACTCGGAAGGAGCAGAGCTAGGTTGCAGAGGGATGGCTCTGAGCTCAGGGCCGGGACTGACCTCAGCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 90 bp ATAAGGAATGTGAGCTCCCAGATCTGCGGTCTCAAGTCCCAGCTCTaGATGTTGGGGTCCAGTGTGAGCCATGCAGAGGGGTCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: IRNVSSQICGLKSQL*MLGSSVSHAEGSAR
Trigger: CCTTGCTGACCCCTCTGCATGGCTCACACTGGACCCCAACATTCAGAGCTGGGACTTGAGACCGCAGATCTGGGAGCTCACATTCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 90 bp CTAGCTCTGCTCCTTCCGAGTCAGTTCTTGAGCCCAGCTTTCCAGTaGGGATCCGCACCTGCGGGATGTGTGTCCTATTCATGTGGCATC +
Preference number: 1 (lower is better)
Translates to: LALLLPSQFLSPAFQ*GSAPAGCVSYSCGI
Trigger: GATGCCACATGAATAGGACACACATCCCGCAGGTGCGGATCCTCACTGGAAAGCTGGGCTCAAGAACTGACTCGGAAGGAGCAGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 90 bp CTCAGCGATGCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTaGCAAAACTCCCTGTTGTTCTCTGACCACTACTCTTTACCAACC +
Preference number: 1 (lower is better)
Translates to: LSDAPSSPCLTKCLL*QNSLLFSDHYSLPT
Trigger: GGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATCGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 90 bp GAAAGTCACCAGATTGATAAGTGGCCACGAGACAGCACCTGGGCATaGATGATGAGAACGGGTCCCACGCTGGTAGGGAGAAACACAATC +
Preference number: 1 (lower is better)
Translates to: ESHQIDKWPRDSTWA*MMRTGPTLVGRNTI
Trigger: GATTGTGTTTCTCCCTACCAGCGTGGGACCCGTTCTCATCATTCATGCCCAGGTGCTGTCTCGTGGCCACTTATCAATCTGGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 90 bp TGGCAAAACTCCCTGTTGTTCTCTGACCACTACTCTTTACCAACCTaGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAAT +
Preference number: 1 (lower is better)
Translates to: WQNSLLFSDHYSLPT*PGKASQVPRVSQGN
Trigger: ATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 90 bp TTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTCTCTaGCCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGT +
Preference number: 1 (lower is better)
Translates to: LPHQMSPVAKLPVVL*PLLFTNLARESIPS
Trigger: ACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR GCA 90 bp CGGCTTGGCCCACCCCTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGGTCCAGTGTGAGCCATaGAGAGGGGTCAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: RLGPPLQAPPPRRCETELVQCEP*RGVSKE
Trigger: CTCCTTGCTGACCCCTCTGCATGGCTCACACTGGAC...CAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR GCA 90 bp GATGCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGGGCTTGGCCCACCCCTaGAGGCCCCACCACCAAGGA +
Preference number: 2 (lower is better)
Translates to: DAPSSPCLTKCLLWQNSLGLAHP*RPHHQG
Trigger: TCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCC...CAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 90 bp CCAGAGTGCACAGTTCAATTCCTAGCCACACTGCTGGCTACTCACTaGGTGCCCTCTGGCCTCCCCTGTTCGGCTTGGCCCACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: PECTVQFLATLLATH*VPSGLPCSAWPTPA
Trigger: TGCAGGGGTGGGCCAAGCCGAACAGGGGAGGCCAGAGGGCACCAAGTGAGTAGCCAGCAGTGTGGCTAGGAATTGAACTGTGCACTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTGGTCAGTCCCGGCCCTaGGCTCAGAGCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCGQSRP*AQSHPS
Trigger: AGAGGGATGGCTCTGAGCTCAGGGCCGGGACTGACC...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp CTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTGTTGGGGTCCAGTGTaGGCCATGCAGAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: LTTTLYQPGQGKHPKSQECWGPV*AMQRGQ
Trigger: CTGACCCCTCTGCATGGCTCACACTGGACCCCAACA...CTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR GCA 90 bp GCGCCTTTCTCCTTTCCTGATCCCTCGTTCCCCCAGGCTTCTGAATTCATCGAGGTGAGCTCCCAGATCTaGGGTCTCAAGTCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: APFSFPDPSFPQASEFIEVSSQI*GLKSQL
Trigger: GAGCTGGGACTTGAGACCGCAGATCTGGGAGCTCAC...CTCGATGAATTCAGAAGCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCACCACCAAGGAGGTGTaGAACAGAGCTGTCCATGGT +
Preference number: 2 (lower is better)
Translates to: NLARESIPSPKSLPGEFVTTKEV*NRAVHG
Trigger: ACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGT...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR GCA 90 bp CTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTCTGGGCTGTAACAACTaGAGTGACCAGACAGGAGAC +
Preference number: 2 (lower is better)
Translates to: LQAPPPRRCETELSMVVGLGCNN*SDQTGD
Trigger: GTCTCCTGTCTGGTCACTGCAGTTGTTACAGCCCAG...ACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTTCCGAGTCAGTTCTTaGGCCCAGCTTTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCFRVSS*AQLSSE
Trigger: CTCACTGGAAAGCTGGGCTCAAGAACTGACTCGGAA...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CCA 90 bp GATAGGTCAACCCAGACCATCCTTTTCCTTTCTGTGAAATCAAGGCAGGTGAGTAACTCCAGGGCTGCCTaGCTCAGGACGTCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: DRSTQTILFLSVKSRQVSNSRAA*LRTSAP
Trigger: TGGGGCTGACGTCCTGAGCCAGGCAGCCCTGGAGTT...ACTCACCTGCCTTGATTTCACAGAAAGGAAAAGGATGGTCTGGGTTGACCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp GTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGGCCTTTCTCCTTTCCTaGTCCCTCGTTCCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VKQSCPWLLVVWLCNWTKAFLLS*SLVPPG
Trigger: GCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGC...CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 90 bp TCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTaGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SSPCLTKCLLWQNSL*FSDHYSLPTWPGKA
Trigger: TGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR TCA 90 bp GATAGGTCAACCCAGACCATCCTTTTCCTTTCTGTGAAATCAAGGCAGGTGAGTGACAGCACCTGGGCATaGATGATGAGAACGGGTCCC +
Preference number: 2 (lower is better)
Translates to: DRSTQTILFLSVKSRQVSDSTWA*MMRTGP
Trigger: GGGACCCGTTCTCATCATTCATGCCCAGGTGCTGTC...ACTCACCTGCCTTGATTTCACAGAAAGGAAAAGGATGGTCTGGGTTGACCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CCA 90 bp GTAATTGGACTAAGCGATGGTGGGATTTCTGGCCCTAGAAAGCAGACTTTTGAACTTGGCCACCGGAACTaGGCTGTAACAACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: VIGLSDGGISGPRKQTFELGHRN*AVTTAV
Trigger: CACTGCAGTTGTTACAGCCCAGTTCCGGTGGCCAAG...TTCAAAAGTCTGCTTTCTAGGGCCAGAAATCCCACCATCGCTTAGTCCAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CCA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGAAACAGAGCTGTCCATaGTTGTTGGTGGTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKKQSCP*LLVVWL
Trigger: AAGCCAGACCACCAACAACCATGGACAGCTCTGTTT...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp CCTAGCCACACTGCTGGCTACTCACTTGGTGCCCTCTaGCCTCCCCTGTTCGGCTTGGCCCACCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: PSHTAGYSLGAL*PPLFGLAHPCR
Trigger: CCTGCAGGGGTGGGCCAAGCCGAACAGGGGAGGCCAGAGGGCACCAAGTGAGTAGCCAGCAGTGTGGCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR GCA 72 bp GGGCACCCTGAGCTCAGCGATGCCCCCTCCAGTCCTTaGCTCACCAAATGTCTCCTGTGGCAAAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: GHPELSDAPSSP*LTKCLLWQNSL
Trigger: CAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATCGCTGAGCTCAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 72 bp GTGAGCTCCCAGATCTGCGGTCTCAAGTCCCAGCTCTaGATGTTGGGGTCCAGTGTGAGCCATGCAGAGGGG +
Preference number: 3 (lower is better)
Translates to: VSSQICGLKSQL*MLGSSVSHAEG
Trigger: CCCCTCTGCATGGCTCACACTGGACCCCAACATTCAGAGCTGGGACTTGAGACCGCAGATCTGGGAGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR GCA 72 bp AGGTCAGTCCCGGCCCTGAGCTCAGAGCCATCCCTCTaGAACCTAGCTCTGCTCCTTCCGAGTCAGTTCTTG +
Preference number: 3 (lower is better)
Translates to: RSVPALSSEPSL*NLALLLPSQFL
Trigger: CAAGAACTGACTCGGAAGGAGCAGAGCTAGGTTGCAGAGGGATGGCTCTGAGCTCAGGGCCGGGACTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR GCA 72 bp CACAGGCCTTGGCCACCGGAACTGGGCTGTAACAACTaGAGTGACCAGACAGGAGACCAGCTGAGGTCAGTC +
Preference number: 3 (lower is better)
Translates to: HRPWPPELGCNN*SDQTGDQLRSV
Trigger: GACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTTACAGCCCAGTTCCGGTGGCCAAGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CAA 90 bp GATGCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGGAAGGGCCAGTGTCCTaGGCAGGGTCATGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: DAPSSPCLTKCLLWQNSLEGPVS*AGSWFP
Trigger: TGGGAACCATGACCCTGCCAAGGACACTGGCCCTTC...CAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp AGGACGTCAGCCCCAACACAGAAGGGCCAGTGTCCTTaGCAGGGTCATGGTTCCCATAAGGAATGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: RTSAPTQKGQCP*QGHGSHKECEL
Trigger: GAGCTCACATTCCTTATGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGACGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp TTTAGACTGGGAGTCACAGGCCTTGGCCACCGGAACTaGGCTGTAACAACTGCAGTGACCAGACAGGAGACC +
Preference number: 3 (lower is better)
Translates to: FRLGVTGLGHRN*AVTTAVTRQET
Trigger: GGTCTCCTGTCTGGTCACTGCAGTTGTTACAGCCCAGTTCCGGTGGCCAAGGCCTGTGACTCCCAGTCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 72 bp CAGATTGATAAGTGGCCACGAGACAGCACCTGGGCATaGATGATGAGAACGGGTCCCACGCTGGTAGGGAGA +
Preference number: 3 (lower is better)
Translates to: QIDKWPRDSTWA*MMRTGPTLVGR
Trigger: TCTCCCTACCAGCGTGGGACCCGTTCTCATCATTCATGCCCAGGTGCTGTCTCGTGGCCACTTATCAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CAA 90 bp CGGCTTGGCCCACCCCTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGCTAGAAAGCAGACTTTaGAAGTTTCTCTTATCTTCC +
Preference number: 3 (lower is better)
Translates to: RLGPPLQAPPPRRCETELLESRL*KFLLSS
Trigger: GGAAGATAAGAGAAACTTCAAAAGTCTGCTTTCTAG...CAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp GCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTaGCAAAACTCCCTGTTGTTCTCTGACCACTACTCT +
Preference number: 3 (lower is better)
Translates to: APSSPCLTKCLL*QNSLLFSDHYS
Trigger: AGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp TCCCTGTTGTTCTCTGACCACTACTCTTTACCAACCTaGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: SLLFSDHYSLPT*PGKASQVPRVS
Trigger: GGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CAA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCAGAGCTGTCCATGGTaGTTGGTGGTCTGGCTTTGT +
Preference number: 3 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVQSCPW*LVVWLC
Trigger: ACAAAGCCAGACCACCAACAACCATGGACAGCTCTG...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CCA 72 bp CCCCACCACCAAGGAGGTGTGAAACAGAGCTGTCCATaGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAG +
Preference number: 3 (lower is better)
Translates to: PHHQGGVKQSCP*LLVVWLCNWTK
Trigger: CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CAA 90 bp TCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAAACTCAACCCAGACATaGTCAGATCTAACTCCAGGG +
Preference number: 3 (lower is better)
Translates to: SLTTTLYQPGQGKHPKSQNSTQT*SDLTPG
Trigger: CCCTGGAGTTAGATCTGACAATGTCTGGGTTGAGTT...TTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR-3UTR CAA 90 bp GATGCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTCCCCCAGGAATCCTTaGATAAGTAAAACAGTAAGA +
Preference number: 3 (lower is better)
Translates to: DAPSSPCLTKCLLWQNSLSPRNP*ISKTVR
Trigger: TCTTACTGTTTTACTTATCAAAGGATTCCTGGGGGA...CAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 72 bp CAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTCTCTaGCCACTACTCTTTACCAACCTGGCCAGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: QMSPVAKLPVVL*PLLFTNLARES
Trigger: GCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR TCA 72 bp AGGAATCCTTTGATAAGTAAAACAGTAAGAATGAGATaGACACAAGTTGACCTGGGGCTCAGAAACAATCCT +
Preference number: 3 (lower is better)
Translates to: RNPLISKTVRMR*TQVDLGLRNNP
Trigger: AGGATTGTTTCTGAGCCCCAGGTCAACTTGTGTTCATCTCATTCTTACTGTTTTACTTATCAAAGGATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CGGCTTGGCCCACCCCTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGGGCACCGGGGCATCTTaGCGGCGAAGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RLGPPLQAPPPRRCETELGTGAS*RRRQLL
Trigger: GAGCAGCTGCCTTCGCCGCCAAGATGCCCCGGTGCC...CAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CGGCTTGGCCCACCCCTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGCTGCCCATCAGGCCCTaGCAGCAGCTGTCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLGPPLQAPPPRRCETELLPIRP*QQLSEV
Trigger: GACTTCGGACAGCTGCTGCCAGGGCCTGATGGGCAG...CAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TCAGCCCCAACACAGAAGGGCCAGTGTCCTTGGCAGGGTCATGGTTCCCATAAGGTGCCCCAAGACCACTaGCCGCCACTGGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SAPTQKGQCPWQGHGSHKVPQDH*PPLGSP
Trigger: CGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCAC...CTTATGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp GACGTCAGCCCCAACACAGAAGGGCCAGTGTCCTTGGCAGGGTCATGGTTCCCATCCTCACTTTGGCTCTaGGTGGTGGCTGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DVSPNTEGPVSLAGSWFPSSLWL*VVAGPG
Trigger: CCCGGGACCAGCCACCACTCAGAGCCAAAGTGAGGA...TGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCGGGTTGGGCCTCACTTaGCACGTCAGCAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSGLGLT*HVSKGS
Trigger: GCTGCCCTTGCTGACGTGCCAAGTGAGGCCCAACCC...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CCACCGGAACTGGGCTGTAACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGACGCCCAGCTCCCGGTaGACACCGGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: PPELGCNNCSDQTGDQLRTPSSR*TPEHWM
Trigger: CATCCAGTGCTCCGGTGTCCACCGGGAGCTGGGCGT...CCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTTACAGCCCAGTTCCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CGGCTTGGCCCACCCCTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGTTTGATGGGCAGGGGTaGGGGACTGTCCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RLGPPLQAPPPRRCETELFDGQG*GTVLTL
Trigger: CAAAGTGAGGACAGTCCCCCACCCCTGCCCATCAAA...CAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAGGGGTGGGCCAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCAAGGGGGACAGGCTCTaGGCTGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSKGDRL*AAFQPS
Trigger: AGATGGCTGGAAGGCAGCTCAGAGCCTGTCCCCCTT...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTGGCGAGCTCTCCTGGTaGCTGCCCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCGELSW*LPIRPW
Trigger: CCAGGGCCTGATGGGCAGGCACCAGGAGAGCTCGCC...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCGCTGGAGGAGGAGGATaGTGGGCTGCTCCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSAGGGG*WAAPVF
Trigger: GAAAACCGGAGCAGCCCAGCATCCTCCTCCTCCAGC...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCCCGTGGGAGGGCAGGTaGGCCTCCATGACTTCATTG +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSPWEGR*ASMTSL
Trigger: CAATGAAGTCATGGAGGCCCACCTGCCCTCCCACGG...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTGGTTTAGGGCTGCCGTaGGAGGGCAGGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCGLGLP*EGRWAS
Trigger: GGAGGCCCACCTGCCCTCCCACGGCAGCCCTAAACC...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GACGTCAGCCCCAACACAGAAGGGCCAGTGTCCTTGGCAGGGTCATGGTTCCCACGAAGTCCTGCCCATTaGCAAAGGCCTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: DVSPNTEGPVSLAGSWFPRSPAH*QRPPGR
Trigger: CCGTCCTGGAGGCCTTTGCCAATGGGCAGGACTTCG...TGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GCGCCTTTCTCCTTTCCTGATCCCTCGTTCCCCCAGGCTTCTGAATTCATCGAGCAGGGCGAGCTCTCCTaGTGCCTGCCCATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: APFSFPDPSFPQASEFIEQGELS*CLPIRP
Trigger: GGGCCTGATGGGCAGGCACCAGGAGAGCTCGCCCTG...CTCGATGAATTCAGAAGCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCTGGCTGGTCCCGGGGTaGCAACGGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSWLVPG*QRSHRS
Trigger: AGACCTATGAGACCGTTGCCACCCCGGGACCAGCCA...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 72 bp ACAGTTCAATTCCTAGCCACACTGCTGGCTACTCACTaGGTGCCCTCTGGCCTCCCCTGTTCGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVQFLATLLATH*VPSGLPCSAWP
Trigger: GGGCCAAGCCGAACAGGGGAGGCCAGAGGGCACCAAGTGAGTAGCCAGCAGTGTGGCTAGGAATTGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTCCACTGGGCTCCCCGTaGAAGGCATTGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCPLGSP*KALLRA
Trigger: AGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGG...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGGGCAGCTGCTCCGGCTaGGGAACTGAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTTTLYQPGQGKHPKSQEGSCSG*GTEVLC
Trigger: GCAGAGGACCTCAGTTCCCCAGCCGGAGCAGCTGCC...CTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCCTAGCCACACTGCTGGCCAGGGCGTGAGATGCTaGCTGATTCCTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RTTAASRVHSSIPSHTAGQGVRC*LIPGGP
Trigger: AGGGCCTCCAGGAATCAGCCAGCATCTCACGCCCTG...GCCAGCAGTGTGGCTAGGAATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp TCAGCCCCAACACAGAAGGGCCAGTGTCCTTGGCAGGGTCATGGTTCCCATAAGAGTCCCGGAGCTGGGTaGGCTTGTGCAGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SAPTQKGQCPWQGHGSHKSPGAG*ACAVPL
Trigger: AAGAGGAACTGCACAAGCTCACCCAGCTCCGGGACT...CTTATGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CCAGATCTGCGGTCTCAAGTCCCAGCTCTGAATGTTGGGGTCCAGTGTGAGCCATCCAAGGTGAGCGATTaGATGCGGGAGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: PDLRSQVPALNVGVQCEPSKVSD*MREKRT
Trigger: CGTGCGCTTCTCCCGCATTCAATCGCTCACCTTGGA...TGGCTCACACTGGACCCCAACATTCAGAGCTGGGACTTGAGACCGCAGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTGGAACTGAGGTCCTCTaGGGTGACGGCCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCGTEVL*GDGQEL
Trigger: GAGTTCCTGGCCGTCACCGCAGAGGACCTCAGTTCC...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AACAACTGCAGTGACCAGACAGGAGACCAGCTGAGGTCAGTCCCGGCCCTGAGCAACTTGATGAGGCTCTaGAGGAAGTCTGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NNCSDQTGDQLRSVPALSNLMRL*RKSGPC
Trigger: GCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTT...GCTCAGGGCCGGGACTGACCTCAGCTGGTCTCCTGTCTGGTCACTGCAGTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGCTTCGAGGGGCAGTaGTTTTCTTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQAPPPRRCETELSMVVGGFEGQ*FSSSSS
Trigger: GGAGGAGGAGGAAGAAAAGCACTGCCCCTCGAAGCC...ACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCCTAGCCACACTGCTGGCCTACTACACAGAGGCTaGCGGGCAGAGGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: RTTAASRVHSSIPSHTAGLLHRG*RAEGLS
Trigger: AGACAGTCCCTCTGCCCGGCAGCCTCTGTGTAGTAG...GCCAGCAGTGTGGCTAGGAATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TCAGCCCCAACACAGAAGGGCCAGTGTCCTTGGCAGGGTCATGGTTCCCATAAGGCAACGGTCATTCCCTaGCCTGCTCTTCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SAPTQKGQCPWQGHGSHKATVIP*PALHLS
Trigger: GCTGAGGTGAAGAGCAGGCCAGGGAATGACCGTTGC...CTTATGGGAACCATGACCCTGCCAAGGACACTGGCCCTTCTGTGTTGGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GCGCCTTTCTCCTTTCCTGATCCCTCGTTCCCCCAGGCTTCTGAATTCATCGAGATCGGCAGGGAAGCATaGCTGGCGACTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: APFSFPDPSFPQASEFIEIGREA*LATLMA
Trigger: GGCCATCAGAGTCGCCAGCCATGCTTCCCTGCCGAT...CTCGATGAATTCAGAAGCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CCAGATCTGCGGTCTCAAGTCCCAGCTCTGAATGTTGGGGTCCAGTGTGAGCCATCTGAACCAGGTTCTTaGAGAGGGCAGCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: PDLRSQVPALNVGVQCEPSEPGS*RGQPPL
Trigger: GAGAGGTGGCTGCCCTCTTCAAGAACCTGGTTCAGA...TGGCTCACACTGGACCCCAACATTCAGAGCTGGGACTTGAGACCGCAGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCCTAGCCACACTGCTGGCCATGCCTCACACTCCTaGTCGTCCTCTGCATGGAAG +
Preference number: 4 (lower is better)
Translates to: RTTAASRVHSSIPSHTAGHASHS*SSSAWK
Trigger: CTTCCATGCAGAGGACGAGCAGGAGTGTGAGGCATG...GCCAGCAGTGTGGCTAGGAATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCGGTCATTCCCTGGCCTaGTCTTCACCTCAGCGACAA +
Preference number: 4 (lower is better)
Translates to: NLARESIPSPKSLPGEFVGHSLA*SSPQRQ
Trigger: TTGTCGCTGAGGTGAAGAGCAGGCCAGGGAATGACC...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CCAGATCTGCGGTCTCAAGTCCCAGCTCTGAATGTTGGGGTCCAGTGTGAGCCATCTCGCTGTGTGTCCTaGGACATCACCCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PDLRSQVPALNVGVQCEPSRCVS*DITPWL
Trigger: AAGCCATGGGGTGATGTCCCAGGACACACAGCGAGA...TGGCTCACACTGGACCCCAACATTCAGAGCTGGGACTTGAGACCGCAGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTGGGCCTTGCTTCACCTaGCTCTCTCCAGCTTTGACA +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCGPCFT*LSPALT
Trigger: TGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCC...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp AGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCCTAGCCACACTGCTGGCGGATCGAGTGCTCTCTaGGCTGAATTTGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTTAASRVHSSIPSHTAGGSSAL*AEFDRE
Trigger: CTCCCTGTCAAATTCAGCTCAGAGAGCACTCGATCC...GCCAGCAGTGTGGCTAGGAATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTCGCCCATCCCTTAGATaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCRPSLR*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCATCTAAGGGATGGGCG...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTTGGGTGATCCTCTCTaGTCTCCAGGTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCLGDPL*SPGAAS
Trigger: GGATGCTGCACCTGGAGAGCAGAGAGGATCACCCAA...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTCTGTTGATCATGCTGTaGGAGATGGTCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQAPPPRRCETELSMVVGLLIML*EMVRQP
Trigger: TGGCTGCCTGACCATCTCGCACAGCATGATCAACAG...ACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp TCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAAAGCGTCCCCGCTTGTaGCTGCTCCAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLTTTLYQPGQGKHPKSQKRPRL*LLQQLF
Trigger: GAAGAGCTGCTGGAGCAGGCACAAGCGGGGACGCTT...TTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGCTACCCCAGCAGGCCTaGGCTGGGGGCTTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKLPQQA*AGGFEG
Trigger: CCCCTCGAAGCCCCCAGCGCAGGCCTGCTGGGGTAG...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GCGCCTTTCTCCTTTCCTGATCCCTCGTTCCCCCAGGCTTCTGAATTCATCGAGGCTCTGCAGGAAGTCTaGGCCTTGCTTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: APFSFPDPSFPQASEFIEALQEV*ALLHLT
Trigger: AGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGC...CTCGATGAATTCAGAAGCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCACCACTGGCCGCCACTaGGCTCCCCGTGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVTTGRH*APRERH
Trigger: ATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGT...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp TGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCTGCAGTTCCTCTTCCTaGGCTTGCCGAAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: CSLTTTLYQPGQGKHPKSCSSSS*ACRSPC
Trigger: GCATGGGCTTCGGCAAGCTCAGGAAGAGGAACTGCA...GGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CTGCAGGCCCCACCACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTCATAGGTCTTGTTGCTaGTGTCCAGCCTCACACTAC +
Preference number: 4 (lower is better)
Translates to: LQAPPPRRCETELSMVVGHRSCC*CPASHY
Trigger: GTAGTGTGAGGCTGGACATCAGCAACAAGACCTATG...ACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTGGGGCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCCCACACTTCCTCTTCTaGCAGACTCTTCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: NLARESIPSPKSLPGEFVPHFLF*QTLRIP
Trigger: TGGGATTCGAAGAGTCTGGCAGAAGAGGAAGTGTGG...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp TCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAACAGAACGATCTCCACTaGAATGTCCGGCTCGCCCGA +
Preference number: 4 (lower is better)
Translates to: SLTTTLYQPGQGKHPKSQQNDLH*NVRLAR
Trigger: TCGGGCGAGCCGGACATTGCAGTGGAGATCGTTCTG...TTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTTTTCTCCTCGGGGTTaGGCCTCACTTGGCACGTCA +
Preference number: 4 (lower is better)
Translates to: LTTTLYQPGQGKHPKSQEFSPRG*ASLGTS
Trigger: TGACGTGCCAAGTGAGGCCCAACCCCGAGGAGAAAA...CTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATCTTGGTGCTGGTGGATaGTGTAGCCGCCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNLGAGG*CSRPLS
Trigger: ACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAG...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCTCTGTAAGATAGCCTaGTCTCCTTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSLTTTLYQPGQGKHPKSLCKIA*SPSRAS
Trigger: GGAGGCCCTGGAAGGAGACCAGGCTATCTTACAGAG...GGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGCTGTCCGTAGCTTCTaGGGATCTGGTGTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLTTTLYQPGQGKHPKSQAVRSF*GSGVEW
Trigger: CCATTCCACACCAGATCCCCAGAAGCTACGGACAGC...TTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTCTACAATGTAGTTCCTaGGGCTGCTCATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCLQCSS*GCSCHS
Trigger: AGAGTGACATGAGCAGCCGCAGGAACTACATTGTAG...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp AATCCTGTTTTAGGACCAAGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCAGCCACCTCTCTGGTaGATACAGCCAGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: NPVLGPRTTAASRVHSSIQPPLW*IQPGSG
Trigger: TCCTGAACCTGGCTGTATTCACCAGAGAGGTGGCTG...AATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCTTGGTCCTAAAACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGTCTCTGCTCTCCAGGTaGAGCATCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKSLLSR*SIPRRE
Trigger: CTCCCTCCGAGGGATGCTGCACCTGGAGAGCAGAGA...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp TGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCTTCTCAGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSLTTTLYQPGQGKHPKSFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACTGAGAA...GGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGCGATGGTGGGATTTCTAGCTGTCCGAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HGCWWSGFVIGLSDGGISSCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTCGGACAGCT...AGAAATCCCACCATCGCTTAGTCCAATTACAAAGCCAGACCACCAACAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTCTCCTTCTCCAGTTTaGCCACTTTGCTTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCSPSPV*PLCFRS
Trigger: ACTACGAAAGCAAAGTGGCCAAACTGGAGAAGGAGA...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GATAGGTCAACCCAGACCATCCTTTTCCTTTCTGTGAAATCAAGGCAGGTGAGTTGGGACATCACCCCATaGCTTCCTCCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: DRSTQTILFLSVKSRQVSWDITP*LPPGNL
Trigger: CAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCA...ACTCACCTGCCTTGATTTCACAGAAAGGAAAAGGATGGTCTGGGTTGACCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGAAGTTGTGCTGGGCATaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LTTTLYQPGQGKHPKSQEKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCATGCCCAGCACAACTT...CTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AATGATGAGAACGGGTCCCACGCTGGTAGGGAGAAACACAATCCTAATATAGTAAGGGAGTCCCGGAGCTaGGTGAGCTTGTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NDENGSHAGREKHNPNIVRESRS*VSLCSS
Trigger: GGAACTGCACAAGCTCACCCAGCTCCGGGACTCCCT...TACTATATTAGGATTGTGTTTCTCCCTACCAGCGTGGGACCCGTTCTCATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TCCCACGCTGGTAGGGAGAAACACAATCCTAATATAGTAGGTATTGAGAGTTGTTGGACACCGGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: SHAGREKHNPNIVGIESCWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCCGGTGTCCA...ACAACTCTCAATACCTACTATATTAGGATTGTGTTTCTCCCTACCAGCGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCGCTTTGGCATCCAAGTaGCCACCATTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVALASK*PPFWMR
Trigger: CCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGC...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp AATCCTGTTTTAGGACCAAGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTTCGTCCTTGCTATTCTaGAGCACTGACACCCATGCC +
Preference number: 4 (lower is better)
Translates to: NPVLGPRTTAASRVHSSISSLLF*STDTHA
Trigger: GGCATGGGTGTCAGTGCTGCAGAATAGCAAGGACGA...AATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCTTGGTCCTAAAACAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCTCAGGGCTTCGTCCTTaGTATTCTGCAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVSGLRP*YSAALT
Trigger: TGTCAGTGCTGCAGAATAGCAAGGACGAAGCCCTGA...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGCCCCGTGAAAGGCATTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKPRERH*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAATGCCTTTCACGGGG...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTTCTTCACATTCCTTGTaGTGTCTGTTTCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCSSHSL*CLFLAM
Trigger: CATAGCCAGAAACAGACAGCACAAGGAATGTGAAGA...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp GTAATTGGACTAAGCGATGGTGGGATTTCTGGCCCTAGAAAGCAGACTTTTGAAGTCCCCGCTTGTGCCTaGTCCAGCAGCTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: VIGLSDGGISGPRKQTFEVPACA*SSSSSH
Trigger: ATGTGAAGAGCTGCTGGAGCAGGCACAAGCGGGGAC...TTCAAAAGTCTGCTTTCTAGGGCCAGAAATCCCACCATCGCTTAGTCCAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGCGATGGTGGGATTTCTTCACACATGTGCAGCTaGAAGACTCGTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: HGCWWSGFVIGLSDGGISSHMCS*KTRRSR
Trigger: GCGAGAGCGACGAGTCTTCCAGCTGCACATGTGTGA...AGAAATCCCACCATCGCTTAGTCCAATTACAAAGCCAGACCACCAACAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATGCCTTCCAGCCATCTTaGAAGAAGTTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNAFQPS*KKLCWA
Trigger: TGCCCAGCACAACTTCTTCCAAGATGGCTGGAAGGC...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp TCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAAAGTGGCCACCATTCTaGATGAGGAAGTCCACTATC +
Preference number: 4 (lower is better)
Translates to: SLTTTLYQPGQGKHPKSQKWPPF*MRKSTI
Trigger: GATAGTGGACTTCCTCATCCAGAATGGTGGCCACTT...TTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 72 bp CACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTaGGTGGTCTGGCTTTGTAATTGGACTAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: HQGGVKQSCPWL*VVWLCNWTKRW
Trigger: CCATCGCTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 72 bp CACCACCAAGGAGGTGTGAAACAGAGCTGTCCATGGTaGTTGGTGGTCTGGCTTTGTAATTGGACTAAGCGA +
Preference number: 4 (lower is better)
Translates to: HHQGGVKQSCPW*LVVWLCNWTKR
Trigger: TCGCTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTGGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
3UTR CAA 72 bp TGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTaGTTCTCTGACCACTACTCTTTACCAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CLTKCLLWQNSL*FSDHYSLPTWP
Trigger: TGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGGCTATTCTGCAGCACTaGCACCCATGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKAILQH*HPCLTL
Trigger: GAGTGTGAGGCATGGGTGTCAGTGCTGCAGAATAGC...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAGTTTGGCCACTTTaGTTTCGTAGTCTTTCCACG +
Preference number: 4 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVPVWPL*FRSLST
Trigger: CGTGGAAAGACTACGAAAGCAAAGTGGCCAAACTGG...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp AATGATGAGAACGGGTCCCACGCTGGTAGGGAGAAACACAATCCTAATATAGTAATGCTGGCTGATTCCTaGAGGCCCTCTTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: NDENGSHAGREKHNPNIVMLADS*RPSSGL
Trigger: TAGCCCTGAAGAGGGCCTCCAGGAATCAGCCAGCAT...TACTATATTAGGATTGTGTTTCTCCCTACCAGCGTGGGACCCGTTCTCATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR TCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATGACTCTCTCCAGCTTTaGCAAGGTACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNDSLQL*QGTHTC
Trigger: ACATGTGTGAGTACCTTGTCAAAGCTGGAGAGAGTC...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATCACGCCTTCTCCAGATaGTTTTTGGAATCATGTCGC +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNHAFSR*FLESCR
Trigger: GCGACATGATTCCAAAAAGCATCTGGAGAAGGCGTG...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGTGTGCTGTCTGTTTCTaGCTATGTCCAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VKQSCPWLLVVWLCNWTKCAVCF*LCPGLS
Trigger: AGACAGCCCTGGACATAGCCAGAAACAGACAGCACA...CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGTGTGGAATGGCGTaGGAACTTGTGTTCTACATA +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNWCGMA*ELVFYI
Trigger: TATGTAGAACACAAGTTCGCACGCCATTCCACACCA...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp GTAATTGGACTAAGCGATGGTGGGATTTCTGGCCCTAGAAAGCAGACTTTTGAATTCCATCTGCAGCTTTaGCATCCAAGTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VIGLSDGGISGPRKQTFEFHLQL*HPSGHH
Trigger: ATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAA...TTCAAAAGTCTGCTTTCTAGGGCCAGAAATCCCACCATCGCTTAGTCCAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR GCA 90 bp GTAATTGGACTAAGCGATGGTGGGATTTCTGGCCCTAGAAAGCAGACTTTTGAATCTTGGAAGAAGTTGTaGTGGGCATGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: VIGLSDGGISGPRKQTFESWKKL*WAWKNL
Trigger: CAAGTTCTTCCATGCCCAGCACAACTTCTTCCAAGA...TTCAAAAGTCTGCTTTCTAGGGCCAGAAATCCCACCATCGCTTAGTCCAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CCA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGTGTTCTACATACTTaGCTACAATGTAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNCVLHT*LQCSSC
Trigger: GCAGGAACTACATTGTAGCCAAGTATGTAGAACACA...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp ATGGCTGGCGACTCTGATGGCCAAGTGCAGGGCGAGCTCTCCTGGTaGCTGCCCATCAGGCCCTGGCAGCAGCTGTCCGAAGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: MAGDSDGQVQGELSW*LPIRPWQQLSEVLP
Trigger: GGGCAGGACTTCGGACAGCTGCTGCCAGGGCCTGATGGGCAGGCACCAGGAGAGCTCGCCCTGCACTTGGCCATCAGAGTCGCCAGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp CTGGCGACTCTGATGGCCAAGTGCAGGGCGAGCTCTCCTGGTGCCTaGCCATCAGGCCCTGGCAGCAGCTGTCCGAAGTCCTGCCCATTG +
Preference number: 5 (lower is better)
Translates to: LATLMAKCRASSPGA*PSGPGSSCPKSCPL
Trigger: CAATGGGCAGGACTTCGGACAGCTGCTGCCAGGGCCTGATGGGCAGGCACCAGGAGAGCTCGCCCTGCACTTGGCCATCAGAGTCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp CGACAAGCATGTTGGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTaGCCCAAGACCACTGGCCGCCACTGGGCTCCCCGTGAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: RQACWLGRGAPYPVG*PKTTGRHWAPRERH
Trigger: ATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp CCTGGCCTGCTCTTCACCTCAGCGACAAGCATGTTGGTTAGGTCGTaGGGCTCCGTATCCAGTCGGGTGCCCCAAGACCACTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: PGLLFTSATSMLVRS*GSVSSRVPQDHWPP
Trigger: TGGCGGCCAGTGGTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAGCAGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp TCCAGTCGGGTGCCCCAAGACCACTGGCCGCCACTGGGCTCCCCGTaGAAGGCATTGCTCAGGGCTTCGTCCTTGCTATTCTGCAGCACT +
Preference number: 5 (lower is better)
Translates to: SSRVPQDHWPPLGSP*KALLRASSLLFCST
Trigger: AGTGCTGCAGAATAGCAAGGACGAAGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCACCCGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp TGCCCCAAGACCACTGGCCGCCACTGGGCTCCCCGTGAAAGGCATTaGTCAGGGCTTCGTCCTTGCTATTCTGCAGCACTGACACCCATG +
Preference number: 5 (lower is better)
Translates to: CPKTTGRHWAPRERH*SGLRPCYSAALTPM
Trigger: CATGGGTGTCAGTGCTGCAGAATAGCAAGGACGAAGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp TCACACATGTGCAGCTGGAAGACTCGTCGCTCTCGCTGTGTGTCCTaGGACATCACCCCATGGCTTCCTCCTGGGAACCTGGCCCGATCC +
Preference number: 5 (lower is better)
Translates to: SHMCSWKTRRSRCVS*DITPWLPPGNLARS
Trigger: GGATCGGGCCAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGGACACACAGCGAGAGCGACGAGTCTTCCAGCTGCACATGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp CCTGAGCTTGCCGAAGCCCATGCACTGAGGCTGCCAGCTTGTCGATaGAGGGGGACAGGCTCTGAGCTGCCTTCCAGCCATCTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PELAEAHALRLPACR*RGTGSELPSSHLGR
Trigger: TCTTCCAAGATGGCTGGAAGGCAGCTCAGAGCCTGTCCCCCTTCATCGACAAGCTGGCAGCCTCAGTGCATGGGCTTCGGCAAGCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp TCGCTCTCGCTGTGTGTCCTGGGACATCACCCCATGGCTTCCTCCTaGGAACCTGGCCCGATCCCTCTCCTTCTCCAGTTTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: SLSLCVLGHHPMASS*EPGPIPLLLQFGHF
Trigger: AAAGTGGCCAAACTGGAGAAGGAGAGGGATCGGGCCAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGGACACACAGCGAGAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp AACGGTCATTCCCTGGCCTGCTCTTCACCTCAGCGACAAGCATGTTaGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTGCCCCAAGACC +
Preference number: 5 (lower is better)
Translates to: NGHSLACSSPQRQAC*LGRGAPYPVGCPKT
Trigger: GGTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAGCAGGCCAGGGAATGACCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp TGGCCACCATTCTGGATGAGGAAGTCCACTATCGGCAGGGAAGCATaGCTGGCGACTCTGATGGCCAAGTGCAGGGCGAGCTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: WPPFWMRKSTIGREA*LATLMAKCRASSPG
Trigger: ACCAGGAGAGCTCGCCCTGCACTTGGCCATCAGAGTCGCCAGCCATGCTTCCCTGCCGATAGTGGACTTCCTCATCCAGAATGGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GCGCCTTTCTCCTTTCCTGATCCCTCGTTCCCCCAGGCTTCTGAATTCATCGAGGGGGTTGGGCCTCACTaGGCACGTCAGCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: APFSFPDPSFPQASEFIEGVGPH*ARQQGQ
Trigger: CTGCCCTTGCTGACGTGCCAAGTGAGGCCCAACCCC...CTCGATGAATTCAGAAGCCTGGGGGAACGAGGGATCAGGAAAGGAGAAAGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp CCATGCACTGAGGCTGCCAGCTTGTCGATGAAGGGGGACAGGCTCTaGGCTGCCTTCCAGCCATCTTGGAAGAAGTTGTGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: PCTEAASLSMKGDRL*AAFQPSWKKLCWAW
Trigger: CCATGCCCAGCACAACTTCTTCCAAGATGGCTGGAAGGCAGCTCAGAGCCTGTCCCCCTTCATCGACAAGCTGGCAGCCTCAGTGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp ACCCCGATCTTTGAGCCATCTCCTTCCACGAGGCCAACCGGAATGTaGCTTCTACTACACAGAGGCTGCCGGGCAGAGGGACTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TPIFEPSPSTRPTGM*LLLHRGCRAEGLSS
Trigger: GGAAGACAGTCCCTCTGCCCGGCAGCCTCTGTGTAGTAGAAGGCACATTCCGGTTGGCCTCGTGGAAGGAGATGGCTCAAAGATCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GCTGTGTGTCCTGGGACATCACCCCATGGCTTCCTCCTGGGAACCTaGCCCGATCCCTCTCCTTCTCCAGTTTGGCCACTTTGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: AVCPGTSPHGFLLGT*PDPSPSPVWPLCFR
Trigger: ACGAAAGCAAAGTGGCCAAACTGGAGAAGGAGAGGGATCGGGCCAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGGACACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp AAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTGTAGCCGCCCCCTaGGTTCTTCCGGTTTGGGTGATCCTCTCTGCTCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: KLLVALVLVDAVAAP*VLPVWVILSALQVQ
Trigger: CTGCACCTGGAGAGCAGAGAGGATCACCCAAACCGGAAGAACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAACAAGCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp CCACCTTCTCAGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATaGTGTAGCCGCCCCCTGAGTTCTTCCGGTTTGGGTGATCCTCTC +
Preference number: 5 (lower is better)
Translates to: PPSQSQTACCLGAGG*CSRPLSSSGLGDPL
Trigger: GAGAGGATCACCCAAACCGGAAGAACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACTGAGAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GGCTGCTCCGGTTTTCTAAGGCCTCAGGAGATTCTGATCTCAGGCTaGGAAGGTCAGAACGATCTCCACTGCAATGTCCGGCTCGCCCGA +
Preference number: 5 (lower is better)
Translates to: GCSGFLRPQEILISG*EGQNDLHCNVRLAR
Trigger: TCGGGCGAGCCGGACATTGCAGTGGAGATCGTTCTGACCTTCCCAGCCTGAGATCAGAATCTCCTGAGGCCTTAGAAAACCGGAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp CACGTCAGCAAGGGCAGCTTCACTGGGGGCCTGTTGATCATGCTGTaGGAGATGGTCAGGCAGCCATACTTCACTCCACACTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: HVSKGSFTGGLLIML*EMVRQPYFTPHFLF
Trigger: GAAGAGGAAGTGTGGAGTGAAGTATGGCTGCCTGACCATCTCGCACAGCATGATCAACAGGCCCCCAGTGAAGCTGCCCTTGCTGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GCGGTGTTTCCATCTGCAGCTTTGGCATCCAAGTGGCCACCATTCTaGATGAGGAAGTCCACTATCGGCAGGGAAGCATGGCTGGCGACT +
Preference number: 5 (lower is better)
Translates to: AVFPSAALASKWPPF*MRKSTIGREAWLAT
Trigger: AGTCGCCAGCCATGCTTCCCTGCCGATAGTGGACTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAACACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp CTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGACTGAGGCTGCCAGCTaGTCGATGAAGGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: LTTTLYQPGQGKHPKSQETEAAS*SMKGDR
Trigger: CCTGTCCCCCTTCATCGACAAGCTGGCAGCCTCAGT...CTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GATGCCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTCAGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: DAPSSPCLTKCLLWQNSLSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACTGA...CAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCCTAGTCGTGCAAGAGTaGCAGGGAATCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: NLARESIPSPKSLPGEFVLVVQE*QGIREN
Trigger: GTTCTCCCGGATTCCCTGCAACTCTTGCACGACTAG...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp CTAGTCGTGCAAGAGTTGCAGGGAATCCGGGAGAACCCCGATCTTTaGGCCATCTCCTTCCACGAGGCCAACCGGAATGTGCCTTCTACT +
Preference number: 5 (lower is better)
Translates to: LVVQELQGIRENPDL*AISFHEANRNVPST
Trigger: AGTAGAAGGCACATTCCGGTTGGCCTCGTGGAAGGAGATGGCTCAAAGATCGGGGTTCTCCCGGATTCCCTGCAACTCTTGCACGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: VKQSCPWLLVVWLCNWTKVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCTTTCCATCTGCAGCTTaGGCATCCAAGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: NLARESIPSPKSLPGEFVFPSAA*ASKWPP
Trigger: TGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAA...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 90 bp TTTTCTTGTACAGGAAGCCCACCTTCTCAGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTGTAGCCGCCCCCTGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FSCTGSPPSQSQTAC*LGAGGCCSRPLSSS
Trigger: GGAAGAACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACTGAGAAGGTGGGCTTCCTGTACAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp ATGTCACTCTCAGCAGAGGGTTTAGGGCTGCCGTGGGAGGGCAGGTaGGCCTCCATGACTTCATTGAAGTGGGAGTTTCCGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: MSLSAEGLGLPWEGR*ASMTSLKWEFPMFK
Trigger: TTTGAACATCGGAAACTCCCACTTCAATGAAGTCATGGAGGCCCACCTGCCCTCCCACGGCAGCCCTAAACCCTCTGCTGAGAGTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GGTCCCGGCTGCAGATGGCTGTCCGTAGCTTCTGGGGATCTGGTGTaGAATGGCGTGCGAACTTGTGTTCTACATACTTGGCTACAATGT +
Preference number: 5 (lower is better)
Translates to: GPGCRWLSVASGDLV*NGVRTCVLHTWLQC
Trigger: ACATTGTAGCCAAGTATGTAGAACACAAGTTCGCACGCCATTCCACACCAGATCCCCAGAAGCTACGGACAGCCATCTGCAGCCGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GTGCCTGCTCCAGCAGCTCTTCACATTCCTTGTGCTGTCTGTTTCTaGCTATGTCCAGGGCTGTCTCTCCAGCATCATTTACTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VPAPAALHIPCAVCF*LCPGLSLQHHLLPP
Trigger: TGGGGGCAGTAAATGATGCTGGAGAGACAGCCCTGGACATAGCCAGAAACAGACAGCACAAGGAATGTGAAGAGCTGCTGGAGCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp AACCTGGCCAGGGAAAGCATCCCAAGTCCCAAGAGTCTCCCAGGGGAATTCGTCGCTCGAACAGCCTTCTaGATCCTCTGTAAGATAGCC +
Preference number: 5 (lower is better)
Translates to: NLARESIPSPKSLPGEFVARTAF*ILCKIA
Trigger: GGCTATCTTACAGAGGATCAAGAAGGCTGTTCGAGC...GACGAATTCCCCTGGGAGACTCTTGGGACTTGGGATGCTTTCCCTGGCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp CCCCCTCCAGTCCTTGCCTCACCAAATGTCTCCTGTGGCAAAACTCCCTGTTGTCTGAGTTCTTCCGGTTaGGGTGATCCTCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PPPVLASPNVSCGKTPCCLSSSG*GDPLCS
Trigger: AGAGCAGAGAGGATCACCCAAACCGGAAGAACTCAG...ACAACAGGGAGTTTTGCCACAGGAGACATTTGGTGAGGCAAGGACTGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 90 bp GTTGTGCTGGGCATGGAAGAACTTGATGAGGCTCTGCAGGAAGTCTaGGCCTTGCTTCACCTGACTCTCTCCAGCTTTGACAAGGTACTC +
Preference number: 5 (lower is better)
Translates to: VVLGMEELDEALQEV*ALLHLTLSSFDKVL
Trigger: GAGTACCTTGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTCCATGCCCAGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp AATCCTGTTTTAGGACCAAGGACCACAGCAGCCTCCAGAGTGCACAGTTCAATTCTTTTCTCCTCGGGGTaGGGCCTCACTTGGCACGTC +
Preference number: 5 (lower is better)
Translates to: NPVLGPRTTAASRVHSSILFSSG*GLTWHV
Trigger: GACGTGCCAAGTGAGGCCCAACCCCGAGGAGAAAAG...AATTGAACTGTGCACTCTGGAGGCTGCTGTGGTCCTTGGTCCTAAAACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCGTCCAAGGTGAGCGATaGAATGCGGGAGAAGCGCAC +
Preference number: 5 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVVQGER*NAGEAH
Trigger: GTGCGCTTCTCCCGCATTCAATCGCTCACCTTGGAC...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp CAAGGAGGTGTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATGGGACTGTCCTCACTTaGGCTCTGAGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: QGGVKQSCPWLLVVWLCNGTVLT*ALSGGW
Trigger: CCAGCCACCACTCAGAGCCAAAGTGAGGACAGTCCC...ATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCACACCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 90 bp AAGAACTTGATGAGGCTCTGCAGGAAGTCTGGGCCTTGCTTCACCTaGCTCTCTCCAGCTTTGACAAGGTACTCACACATGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KNLMRLCRKSGPCFT*LSPALTRYSHMCSW
Trigger: CCAGCTGCACATGTGTGAGTACCTTGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp TTGTTCTCTGACCACTACTCTTTACCAACCTGGCCAGGGAAAGCATCCCAAGTCCCTCTTAGCAGCAGTTaGAGACAGTCTAGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: LFSDHYSLPTWPGKASQVPLSSS*RQSSWP
Trigger: CGGCCAGCTAGACTGTCTCAAACTGCTGCTAAGAGG...GACTTGGGATGCTTTCCCTGGCCAGGTTGGTAAAGAGTAGTGGTCAGAGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp TCCCACGCTGGTAGGGAGAAACACAATCCTAATATAGTAGGTATTGAGAGTTGTCCGAAGTCCTGCCCATaGGCAAAGGCCTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: SHAGREKHNPNIVGIESCPKSCP*AKASRT
Trigger: CGTCCTGGAGGCCTTTGCCAATGGGCAGGACTTCGG...ACAACTCTCAATACCTACTATATTAGGATTGTGTTTCTCCCTACCAGCGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp AATGATGAGAACGGGTCCCACGCTGGTAGGGAGAAACACAATCCTAATATAGTATGCCTTCCAGCCATCTaGGAAGAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NDENGSHAGREKHNPNIVCLPAI*EEVVLG
Trigger: GCCCAGCACAACTTCTTCCAAGATGGCTGGAAGGCA...TACTATATTAGGATTGTGTTTCTCCCTACCAGCGTGGGACCCGTTCTCATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp CAGCCTCTATCGTTCCGTTACAACGACACAAGACAGATTAAGAGATGCTGTAAGCTCAGGGCTTCGTCCTaGCTATTCTGCAGCACTGAC +
Preference number: 5 (lower is better)
Translates to: QPLSFRYNDTRQIKRCCKLRASS*LFCSTD
Trigger: GTCAGTGCTGCAGAATAGCAAGGACGAAGCCCTGAG...CTTACAGCATCTCTTAATCTGTCTTGTGTCGTTGTAACGGAACGATAGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GATAGGTCAACCCAGACCATCCTTTTCCTTTCTGTGAAATCAAGGCAGGTGAGTCAGCTCGTGGCTGTTTaGAGACAAGTGACTATTCCC +
Preference number: 5 (lower is better)
Translates to: DRSTQTILFLSVKSRQVSQLVAV*RQVTIP
Trigger: GGGAATAGTCACTTGTCTCAAAACAGCCACGAGCTG...ACTCACCTGCCTTGATTTCACAGAAAGGAAAAGGATGGTCTGGGTTGACCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGAAACTGCTTGTTGCCTaGGTGCTGGTGGATGCTGTA +
Preference number: 5 (lower is better)
Translates to: VKQSCPWLLVVWLCNWTKKLLVA*VLVDAV
Trigger: TACAGCATCCACCAGCACCAAGGCAACAAGCAGTTT...CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS-3UTR CAA 90 bp GTGAAACAGAGCTGTCCATGGTTGTTGGTGGTCTGGCTTTGTAATTGGACTAAGATCCCATCACTTTTCTaGTACAGGAAGCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: VKQSCPWLLVVWLCNWTKIPSLF*YRKPTF
Trigger: GAAGGTGGGCTTCCTGTACAAGAAAAGTGATGGGAT...CTTAGTCCAATTACAAAGCCAGACCACCAACAACCATGGACAGCTCTGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CCGGGGCATCTTGGCGGCGAAGGCAGCTGCTCCGGCTaGGGAACTGAGGTCCTCTGCGGTGACGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: PGHLGGEGSCSG*GTEVLCGDGQE
Trigger: TTCCTGGCCGTCACCGCAGAGGACCTCAGTTCCCCAGCCGGAGCAGCTGCCTTCGCCGCCAAGATGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp AGCTCCGAGGGGCCCAGGAGGTCCAAGGTGAGCGATTaGATGCGGGAGAAGCGCACGCCCAGCTCCCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSEGPRRSKVSD*MREKRTPSSRW
Trigger: CCACCGGGAGCTGGGCGTGCGCTTCTCCCGCATTCAATCGCTCACCTTGGACCTCCTGGGCCCCTCGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CAGGCCCTGGCAGCAGCTGTCCGAAGTCCTGCCCATTaGCAAAGGCCTCCAGGACGGAGAGGAGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: QALAAAVRSPAH*QRPPGRRGGPG
Trigger: GCCGGGACCTCCTCTCCGTCCTGGAGGCCTTTGCCAATGGGCAGGACTTCGGACAGCTGCTGCCAGGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp TGTTGGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTaGCCCAAGACCACTGGCCGCCACTGGGCTCCCCGT +
Preference number: 6 (lower is better)
Translates to: CWLGRGAPYPVG*PKTTGRHWAPR
Trigger: ACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp CTGATGGCCAAGTGCAGGGCGAGCTCTCCTGGTGCCTaGCCATCAGGCCCTGGCAGCAGCTGTCCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: LMAKCRASSPGA*PSGPGSSCPKS
Trigger: GGACTTCGGACAGCTGCTGCCAGGGCCTGATGGGCAGGCACCAGGAGAGCTCGCCCTGCACTTGGCCATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp GGCAGGGAAGCATGGCTGGCGACTCTGATGGCCAAGTaGAGGGCGAGCTCTCCTGGTGCCTGCCCATCAGGC +
Preference number: 6 (lower is better)
Translates to: GREAWLATLMAK*RASSPGACPSG
Trigger: GCCTGATGGGCAGGCACCAGGAGAGCTCGCCCTGCACTTGGCCATCAGAGTCGCCAGCCATGCTTCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GATGCCAGGCCAGGGCGTGAGATGCTGGCTGATTCCTaGAGGCCCTCTTCAGGGCTAGACGGGGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: DARPGREMLADS*RPSSGLDGAWL
Trigger: GAGCCAGGCCCCGTCTAGCCCTGAAGAGGGCCTCCAGGAATCAGCCAGCATCTCACGCCCTGGCCTGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp ACTGCCCCCACGGGAGCCCTTCCTCTTAGCAGCAGTTaGAGACAGTCTAGCTGGCCGTGGAGCGCCGCGCAG +
Preference number: 6 (lower is better)
Translates to: TAPTGALPLSSS*RQSSWPWSAAQ
Trigger: CTGCGCGGCGCTCCACGGCCAGCTAGACTGTCTCAAACTGCTGCTAAGAGGAAGGGCTCCCGTGGGGGCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TATCCAGTCGGGTGCCCCAAGACCACTGGCCGCCACTaGGCTCCCCGTGAAAGGCATTGCTCAGGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: YPVGCPKTTGRH*APRERHCSGLR
Trigger: ACGAAGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCACCCGACTGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp GTGCCCCAAGACCACTGGCCGCCACTGGGCTCCCCGTaGAAGGCATTGCTCAGGGCTTCGTCCTTGCTATTC +
Preference number: 6 (lower is better)
Translates to: VPQDHWPPLGSP*KALLRASSLLF
Trigger: GAATAGCAAGGACGAAGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGTCTTGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp AGTCCACTATCGGCAGGGAAGCATGGCTGGCGACTCTaGTGGCCAAGTGCAGGGCGAGCTCTCCTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SPLSAGKHGWRL*WPSAGRALLVP
Trigger: AGGCACCAGGAGAGCTCGCCCTGCACTTGGCCATCAGAGTCGCCAGCCATGCTTCCCTGCCGATAGTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp GTCCCGGGGTGGCAACGGTCTCATAGGTCTTGTTGCTaGTGTCCAGCCTCACACTACCCCAGCAGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: VPGWQRSHRSCC*CPASHYPSRPA
Trigger: CGCAGGCCTGCTGGGGTAGTGTGAGGCTGGACATCAGCAACAAGACCTATGAGACCGTTGCCACCCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp ACCACTGGCCGCCACTGGGCTCCCCGTGAAAGGCATTaGTCAGGGCTTCGTCCTTGCTATTCTGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: TTGRHWAPRERH*SGLRPCYSAAL
Trigger: CAGTGCTGCAGAATAGCAAGGACGAAGCCCTGAGCAATGCCTTTCACGGGGAGCCCAGTGGCGGCCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp GTGGAGCGCCGCGCAGTGCAGGGCGGTGTTTCCATCTaGAGCTTTGGCATCCAAGTGGCCACCATTCTGGAT +
Preference number: 6 (lower is better)
Translates to: VERRAVQGGVSI*SFGIQVATILD
Trigger: ATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAACACCGCCCTGCACTGCGCGGCGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GCTCGAACAGCCTTCTTGATCCTCTGTAAGATAGCCTaGTCTCCTTCCAGGGCCTCCTCCCGTGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: ARTAFLILCKIA*SPSRASSRASA
Trigger: GGCGCTGGCACGGGAGGAGGCCCTGGAAGGAGACCAGGCTATCTTACAGAGGATCAAGAAGGCTGTTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CCTGGGACATCACCCCATGGCTTCCTCCTGGGAACCTaGCCCGATCCCTCTCCTTCTCCAGTTTGGCCACTT +
Preference number: 6 (lower is better)
Translates to: PGTSPHGFLLGT*PDPSPSPVWPL
Trigger: AAGTGGCCAAACTGGAGAAGGAGAGGGATCGGGCCAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TGCAGCTGGAAGACTCGTCGCTCTCGCTGTGTGTCCTaGGACATCACCCCATGGCTTCCTCCTGGGAACCTG +
Preference number: 6 (lower is better)
Translates to: CSWKTRRSRCVS*DITPWLPPGNL
Trigger: CAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGGACACACAGCGAGAGCGACGAGTCTTCCAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TCCCTGGCCTGCTCTTCACCTCAGCGACAAGCATGTTaGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTGC +
Preference number: 6 (lower is better)
Translates to: SLACSSPQRQAC*LGRGAPYPVGC
Trigger: GCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAGCAGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp GGTGGATGCTGTAGCCGCCCCCTGAGTTCTTCCGGTTaGGGTGATCCTCTCTGCTCTCCAGGTGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: GGCCSRPLSSSG*GDPLCSPGAAS
Trigger: GGATGCTGCACCTGGAGAGCAGAGAGGATCACCCAAACCGGAAGAACTCAGGGGGCGGCTACAGCATCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 90 bp CAACGGTCATTCCCTGGCCTGCTCTTCACCTCAGCGACAAGCATGTaGGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTGCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: QRSFPGLLFTSATSM*VRSWGSVSSRVPQD
Trigger: GTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAGCAGGCCAGGGAATGACCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 90 bp CCGTGGAGCGCCGCGCAGTGCAGGGCGGTGTTTCCATCTGCAGCTTaGGCATCCAAGTGGCCACCATTCTGGATGAGGAAGTCCACTATC +
Preference number: 6 (lower is better)
Translates to: PWSAAQCRAVFPSAA*ASKWPPFWMRKSTI
Trigger: GATAGTGGACTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAACACCGCCCTGCACTGCGCGGCGCTCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp GTTGCCTTGGTGCTGGTGGATGCTGTAGCCGCCCCCTaGGTTCTTCCGGTTTGGGTGATCCTCTCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: VALVLVDAVAAP*VLPVWVILSAL
Trigger: GAGAGCAGAGAGGATCACCCAAACCGGAAGAACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp ACAGGAAGCCCACCTTCTCAGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTGTAGCCGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: TGSPPSQSQTAC*LGAGGCCSRPL
Trigger: CAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACTGAGAAGGTGGGCTTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp CTGATCTCAGGCTGGGAAGGTCAGAACGATCTCCACTaGAATGTCCGGCTCGCCCGAGGACTATGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: LISGWEGQNDLH*NVRLARGLWSE
Trigger: CTCGGACCATAGTCCTCGGGCGAGCCGGACATTGCAGTGGAGATCGTTCTGACCTTCCCAGCCTGAGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CTGTGTGTCCTGGGACATCACCCCATGGCTTCCTCCTaGGAACCTGGCCCGATCCCTCTCCTTCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: LCVLGHHPMASS*EPGPIPLLLQF
Trigger: AAACTGGAGAAGGAGAGGGATCGGGCCAGGTTCCCAGGAGGAAGCCATGGGGTGATGTCCCAGGACACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GGGTCACCAGGTCGAAACACCTTTTCTCCTCGGGGTTaGGCCTCACTTGGCACGTCAGCAAGGGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: GSPGRNTFSPRG*ASLGTSARAAS
Trigger: TGAAGCTGCCCTTGCTGACGTGCCAAGTGAGGCCCAACCCCGAGGAGAAAAGGTGTTTCGACCTGGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CTCTTCACCTCAGCGACAAGCATGTTGGTTAGGTCGTaGGGCTCCGTATCCAGTCGGGTGCCCCAAGACCAC +
Preference number: 6 (lower is better)
Translates to: LFTSATSMLVRS*GSVSSRVPQDH
Trigger: GTGGTCTTGGGGCACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TCAGCAGAGGGTTTAGGGCTGCCGTGGGAGGGCAGGTaGGCCTCCATGACTTCATTGAAGTGGGAGTTTCCG +
Preference number: 6 (lower is better)
Translates to: SAEGLGLPWEGR*ASMTSLKWEFP
Trigger: CGGAAACTCCCACTTCAATGAAGTCATGGAGGCCCACCTGCCCTCCCACGGCAGCCCTAAACCCTCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp AGGAGGTCCCGGCTGCAGATGGCTGTCCGTAGCTTCTaGGGATCTGGTGTGGAATGGCGTGCGAACTTGTGT +
Preference number: 6 (lower is better)
Translates to: RRSRLQMAVRSF*GSGVEWRANLC
Trigger: ACACAAGTTCGCACGCCATTCCACACCAGATCCCCAGAAGCTACGGACAGCCATCTGCAGCCGGGACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TTCTGGATGAGGAAGTCCACTATCGGCAGGGAAGCATaGCTGGCGACTCTGATGGCCAAGTGCAGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: FWMRKSTIGREA*LATLMAKCRAS
Trigger: GCTCGCCCTGCACTTGGCCATCAGAGTCGCCAGCCATGCTTCCCTGCCGATAGTGGACTTCCTCATCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TGGGGGACTGTCCTCACTTTGGCTCTGAGTGGTGGCTaGTCCCGGGGTGGCAACGGTCTCATAGGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: WGTVLTLALSGG*SRGGNGLIGLV
Trigger: AACAAGACCTATGAGACCGTTGCCACCCCGGGACCAGCCACCACTCAGAGCCAAAGTGAGGACAGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp TGGGTCACCAGGTCGAAACACCTTTTCTCCTCGGGGTaGGGCCTCACTTGGCACGTCAGCAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: WVTRSKHLFSSG*GLTWHVSKGSF
Trigger: GAAGCTGCCCTTGCTGACGTGCCAAGTGAGGCCCAACCCCGAGGAGAAAAGGTGTTTCGACCTGGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp TTCCCTGGCCTGCTCTTCACCTCAGCGACAAGCATGTaGGTTAGGTCGTGGGGCTCCGTATCCAGTCGGGTG +
Preference number: 6 (lower is better)
Translates to: FPGLLFTSATSM*VRSWGSVSSRV
Trigger: CACCCGACTGGATACGGAGCCCCACGACCTAACCAACATGCTTGTCGCTGAGGTGAAGAGCAGGCCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp GCCGCGCAGTGCAGGGCGGTGTTTCCATCTGCAGCTTaGGCATCCAAGTGGCCACCATTCTGGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: AAQCRAVFPSAA*ASKWPPFWMRK
Trigger: CTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAACACCGCCCTGCACTGCGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 90 bp TCCACGTGGCCGAGACCAGAGCTGTGGATAGCTCGAACAGCCTTCTaGATCCTCTGTAAGATAGCCTGGTCTCCTTCCAGGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: STWPRPELWIARTAF*ILCKIAWSPSRASS
Trigger: GGAGGAGGCCCTGGAAGGAGACCAGGCTATCTTACAGAGGATCAAGAAGGCTGTTCGAGCTATCCACAGCTCTGGTCTCGGCCACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp CAGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATaGTGTAGCCGCCCCCTGAGTTCTTCCGGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: QSQTACCLGAGG*CSRPLSSSGLG
Trigger: ACCCAAACCGGAAGAACTCAGGGGGCGGCTACAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp TTTGAGCCATCTCCTTCCACGAGGCCAACCGGAATGTaGCTTCTACTACACAGAGGCTGCCGGGCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: FEPSPSTRPTGM*LLLHRGCRAEG
Trigger: TCCCTCTGCCCGGCAGCCTCTGTGTAGTAGAAGGCACATTCCGGTTGGCCTCGTGGAAGGAGATGGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp CTGCAGCTTTGGCATCCAAGTGGCCACCATTCTGGATaGGGAAGTCCACTATCGGCAGGGAAGCATGGCTGG +
Preference number: 6 (lower is better)
Translates to: LQLWHPSGHHSG*GSPLSAGKHGW
Trigger: CCAGCCATGCTTCCCTGCCGATAGTGGACTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp AAGGGCAGCTTCACTGGGGGCCTGTTGATCATGCTGTaGGAGATGGTCAGGCAGCCATACTTCACTCCACAC +
Preference number: 6 (lower is better)
Translates to: KGSFTGGLLIML*EMVRQPYFTPH
Trigger: GTGTGGAGTGAAGTATGGCTGCCTGACCATCTCGCACAGCATGATCAACAGGCCCCCAGTGAAGCTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TGGGAGGGCAGGTGGGCCTCCATGACTTCATTGAAGTaGGAGTTTCCGATGTTCAAAGCCAGCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WEGRWASMTSLK*EFPMFKASSSS
Trigger: GGAGCTGCTGCTGGCTTTGAACATCGGAAACTCCCACTTCAATGAAGTCATGGAGGCCCACCTGCCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp CAGGTTCAGGAAGCCAGTGGACAGCTCGTGGCTGTTTaGAGACAAGTGACTATTCCCCAAGGCCTCCACGGC +
Preference number: 6 (lower is better)
Translates to: QVQEASGQLVAV*RQVTIPQGLHG
Trigger: GCCGTGGAGGCCTTGGGGAATAGTCACTTGTCTCAAAACAGCCACGAGCTGTCCACTGGCTTCCTGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp GCAAGAGTTGCAGGGAATCCGGGAGAACCCCGATCTTaGAGCCATCTCCTTCCACGAGGCCAACCGGAATGT +
Preference number: 6 (lower is better)
Translates to: ARVAGNPGEPRS*SHLLPRGQPEC
Trigger: ACATTCCGGTTGGCCTCGTGGAAGGAGATGGCTCAAAGATCGGGGTTCTCCCGGATTCCCTGCAACTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 90 bp TCCCCAGTGGTAGTCCATATGCAGAGGGAAAGCAAGCGTCCCCGCTaGTGCCTGCTCCAGCAGCTCTTCACATTCCTTGTGCTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: SPVVVHMQRESKRPR*CLLQQLFTFLVLSV
Trigger: AACAGACAGCACAAGGAATGTGAAGAGCTGCTGGAGCAGGCACAAGCGGGGACGCTTGCTTTCCCTCTGCATATGGACTACCACTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp CTGTCCAGCGGGAAGGAGACGATGTTGTTCAGGTTCTaGACCAGGTTCTTGAAGAGGGCAGCCACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSGKETMLFRF*TRFLKRAATSL
Trigger: CAGAGAGGTGGCTGCCCTCTTCAAGAACCTGGTTCAGAACCTGAACAACATCGTCTCCTTCCCGCTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TGCTCCTCAGTCTCCACGTGGCCGAGACCAGAGCTGTaGATAGCTCGAACAGCCTTCTTGATCCTCTGTAAG +
Preference number: 6 (lower is better)
Translates to: CSSVSTWPRPEL*IARTAFLILCK
Trigger: CTTACAGAGGATCAAGAAGGCTGTTCGAGCTATCCACAGCTCTGGTCTCGGCCACGTGGAGACTGAGGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CTGGGAACCTGGCCCGATCCCTCTCCTTCTCCAGTTTaGCCACTTTGCTTTCGTAGTCTTTCCACGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LGTWPDPSPSPV*PLCFRSLSTPS
Trigger: AGAAGGCGTGGAAAGACTACGAAAGCAAAGTGGCCAAACTGGAGAAGGAGAGGGATCGGGCCAGGTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TCTCCAGCTTTGACAAGGTACTCACACATGTGCAGCTaGAAGACTCGTCGCTCTCGCTGTGTGTCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: SPALTRYSHMCS*KTRRSRCVSWD
Trigger: GTCCCAGGACACACAGCGAGAGCGACGAGTCTTCCAGCTGCACATGTGTGAGTACCTTGTCAAAGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CCATCTGCAGCTTTGGCATCCAAGTGGCCACCATTCTaGATGAGGAAGTCCACTATCGGCAGGGAAGCATGG +
Preference number: 6 (lower is better)
Translates to: PSAALASKWPPF*MRKSTIGREAW
Trigger: CCATGCTTCCCTGCCGATAGTGGACTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp AGGGCGGTGTTTCCATCTGCAGCTTTGGCATCCAAGTaGCCACCATTCTGGATGAGGAAGTCCACTATCGGC +
Preference number: 6 (lower is better)
Translates to: RAVFPSAALASK*PPFWMRKSTIG
Trigger: GCCGATAGTGGACTTCCTCATCCAGAATGGTGGCCACTTGGATGCCAAAGCTGCAGATGGAAACACCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CCTCCTCCTCCTCCTCACTGTCAAAGCCGTGTTCCATaGAATGTCCCCAGTGGTAGTCCATATGCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PPPPPHCQSRVP*NVPSGSPYAEG
Trigger: TCCCTCTGCATATGGACTACCACTGGGGACATTCCATGGAACACGGCTTTGACAGTGAGGAGGAGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GGCATGGAAGAACTTGATGAGGCTCTGCAGGAAGTCTaGGCCTTGCTTCACCTGACTCTCTCCAGCTTTGAC +
Preference number: 6 (lower is better)
Translates to: GMEELDEALQEV*ALLHLTLSSFD
Trigger: GTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTCCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GCCTTCCAGCCATCTTGGAAGAAGTTGTGCTGGGCATaGAAGAACTTGATGAGGCTCTGCAGGAAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AFQPSWKKLCWA*KNLMRLCRKSG
Trigger: CCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTCCATGCCCAGCACAACTTCTTCCAAGATGGCTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp CCGAGACCAGAGCTGTGGATAGCTCGAACAGCCTTCTaGATCCTCTGTAAGATAGCCTGGTCTCCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: PRPELWIARTAF*ILCKIAWSPSR
Trigger: CCTGGAAGGAGACCAGGCTATCTTACAGAGGATCAAGAAGGCTGTTCGAGCTATCCACAGCTCTGGTCTCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS TCA 72 bp AGTCTGGGCCTTGCTTCACCTGACTCTCTCCAGCTTTaGCAAGGTACTCACACATGTGCAGCTGGAAGACTC +
Preference number: 6 (lower is better)
Translates to: SLGLASPDSLQL*QGTHTCAAGRL
Trigger: GAGTCTTCCAGCTGCACATGTGTGAGTACCTTGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp AGATGCTTTTTGGAATCATGTCGCCCATCCCTTAGATaGCCCTTCATCAGACTGTCCAGCGGGAAGGAGACG +
Preference number: 6 (lower is better)
Translates to: RCFLESCRPSLR*PFIRLSSGKET
Trigger: CGTCTCCTTCCCGCTGGACAGTCTGATGAAGGGGCATCTAAGGGATGGGCGACATGATTCCAAAAAGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp GGTTTTCTAAGGCCTCAGGAGATTCTGATCTCAGGCTaGGAAGGTCAGAACGATCTCCACTGCAATGTCCGG +
Preference number: 6 (lower is better)
Translates to: GFLRPQEILISG*EGQNDLHCNVR
Trigger: CCGGACATTGCAGTGGAGATCGTTCTGACCTTCCCAGCCTGAGATCAGAATCTCCTGAGGCCTTAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp CCATCTTGGAAGAAGTTGTGCTGGGCATGGAAGAACTaGATGAGGCTCTGCAGGAAGTCTGGGCCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PSWKKLCWAWKN*MRLCRKSGPCF
Trigger: GAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTCCATGCCCAGCACAACTTCTTCCAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 90 bp CTGGGCATGGAAGAACTTGATGAGGCTCTGCAGGAAGTCTGGGCCTaGCTTCACCTGACTCTCTCCAGCTTTGACAAGGTACTCACACAT +
Preference number: 6 (lower is better)
Translates to: LGMEELDEALQEVWA*LHLTLSSFDKVLTH
Trigger: ATGTGTGAGTACCTTGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTCCATGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp ATGGCTGTCCGTAGCTTCTGGGGATCTGGTGTGGAATaGCGTGCGAACTTGTGTTCTACATACTTGGCTACA +
Preference number: 6 (lower is better)
Translates to: MAVRSFWGSGVE*RANLCSTYLAT
Trigger: TGTAGCCAAGTATGTAGAACACAAGTTCGCACGCCATTCCACACCAGATCCCCAGAAGCTACGGACAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp GAAGAACTTGATGAGGCTCTGCAGGAAGTCTGGGCCTaGCTTCACCTGACTCTCTCCAGCTTTGACAAGGTA +
Preference number: 6 (lower is better)
Translates to: EELDEALQEVWA*LHLTLSSFDKV
Trigger: TACCTTGTCAAAGCTGGAGAGAGTCAGGTGAAGCAAGGCCCAGACTTCCTGCAGAGCCTCATCAAGTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp CCAGCAGCTCTTCACATTCCTTGTGCTGTCTGTTTCTaGCTATGTCCAGGGCTGTCTCTCCAGCATCATTTA +
Preference number: 6 (lower is better)
Translates to: PAALHIPCAVCF*LCPGLSLQHHL
Trigger: TAAATGATGCTGGAGAGACAGCCCTGGACATAGCCAGAAACAGACAGCACAAGGAATGTGAAGAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CAA 72 bp CTCTTCTGCCAGACTCTTCGAATCCCATCACTTTTCTaGTACAGGAAGCCCACCTTCTCAGTCCCAAACTGC +
Preference number: 6 (lower is better)
Translates to: LFCQTLRIPSLF*YRKPTFSVPNC
Trigger: GCAGTTTGGGACTGAGAAGGTGGGCTTCCTGTACAAGAAAAGTGATGGGATTCGAAGAGTCTGGCAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS GCA 72 bp GTCAGGCAGCCATACTTCACTCCACACTTCCTCTTCTaGCAGACTCTTCGAATCCCATCACTTTTCTTGTAC +
Preference number: 6 (lower is better)
Translates to: VRQPYFTPHFLF*QTLRIPSLFLY
Trigger: GTACAAGAAAAGTGATGGGATTCGAAGAGTCTGGCAGAAGAGGAAGTGTGGAGTGAAGTATGGCTGCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8
CDS CCA 72 bp TTTCGTAGTCTTTCCACGCCTTCTCCAGATGCTTTTTaGAATCATGTCGCCCATCCCTTAGATGCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: FRSLSTPSPDAF*NHVAHPLDAPS
Trigger: TGAAGGGGCATCTAAGGGATGGGCGACATGATTCCAAAAAGCATCTGGAGAAGGCGTGGAAAGACTACGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000047526.8