RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022377

Ensembl transcript IDs: ENSMUST00000023008.16, ENSMUST00000110114.10, ENSMUST00000110115.9, ENSMUST00000175793.8, ENSMUST00000175799.8, ENSMUST00000175963.2, ENSMUST00000176014.8, ENSMUST00000176358.2, ENSMUST00000176384.8, ENSMUST00000177035.8, ENSMUST00000177083.8, ENSMUST00000177371.8, ENSMUST00000177374.8

Found 1060 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGAATACTGCATTGTTAGGAGTCGGTACTGCACCCTTCGACGGCTaGTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCT +
Preference number: 1 (lower is better)
Translates to: ENTALLGVGTAPFDG*WRLLTWKASSSYTP
Trigger: AGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAACAATGCAGTATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR GCA 90 bp CCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTaGTCATGTCGCACGTTCAGTAACGCCATTGAGAATACTGCATTG +
Preference number: 1 (lower is better)
Translates to: PGTNFTFHRERRTHL*SCRTFSNAIENTAL
Trigger: CAATGCAGTATTCTCAATGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 90 bp GGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTaGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATA +
Preference number: 1 (lower is better)
Translates to: GVGTAPFDGCWRLLT*KASSSYTPGFCLLI
Trigger: TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 90 bp AGACACTACGGAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTaGTGGAGCATTTTGCAGGTTTGTCCTGCAAGGTTATTTCTTGGG +
Preference number: 1 (lower is better)
Translates to: RHYGSNCSRSVPSSS*WSILQVCPARLFLG
Trigger: CCCAAGAAATAACCTTGCAGGACAAACCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTCCGTAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR GCA 90 bp GCAATTGCTCACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTaGAGGTTTGTCCTGCAAGGTTATTTCTTGGGTGGCTATTCAGAG +
Preference number: 1 (lower is better)
Translates to: AIAHDRFPVAADGAF*RFVLQGYFLGGYSE
Trigger: CTCTGAATAGCCACCCAAGAAATAACCTTGCAGGACAAACCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 90 bp TTGGTCTGTAACAGCAGCTATATACATGTTGTACACAGGATTACATaGAGACAGCGGTCTGGCATGAAGGGTGTGGACGGACGGACAGAA +
Preference number: 1 (lower is better)
Translates to: LVCNSSYIHVVHRIT*RQRSGMKGVDGRTE
Trigger: TTCTGTCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAGCTGCTGTTACAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR GCA 90 bp AAAACACAAGCAACAACAGAGACAGACAGACAGACAGAGATGGCTTaGAGAGAGCTTTATCACAGTGCAATTCATAGCAGCGTCCCACAG +
Preference number: 1 (lower is better)
Translates to: KTQATTETDRQTEMA*RELYHSAIHSSVPQ
Trigger: CTGTGGGACGCTGCTATGAATTGCACTGTGATAAAGCTCTCTGCAAGCCATCTCTGTCTGTCTGTCTGTCTCTGTTGTTGCTTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 90 bp CTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTaGTTTTTGTTTGCTCATAAAACAGCACAGAGAGATGTAAGTGCT +
Preference number: 1 (lower is better)
Translates to: LLETPHLESQQFLYS*FLFAHKTAQRDVSA
Trigger: AGCACTTACATCTCTCTGTGCTGTTTTATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 90 bp TGTGAAATAAAAAGTGTACTGATGCTTCATGGTAACTCCCAGGTATaGACGTGGGATTTAACTAGTGGCAGGCATGACTGGGCTCCTAGA +
Preference number: 1 (lower is better)
Translates to: CEIKSVLMLHGNSQV*TWDLTSGRHDWAPR
Trigger: TCTAGGAGCCCAGTCATGCCTGCCACTAGTTAAATCCCACGTTCATACCTGGGAGTTACCATGAAGCATCAGTACACTTTTTATTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 90 bp AATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATATACATGTTGTACACAGGATTACAT +
Preference number: 1 (lower is better)
Translates to: NTYYIPLLSGPSMSS*SVTAAIYMLYTGLH
Trigger: ATGTAATCCTGTGTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 90 bp AAGACCACAGGATATTTACAATACATACTATATTCCCCTCCTGAGTaGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAT +
Preference number: 1 (lower is better)
Translates to: KTTGYLQYILYSPPE*PFHEFLVCNSSYIH
Trigger: ATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCCTGTGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGA +
Preference number: 2 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPDSGLA*RVWTDG
Trigger: TCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGCACCCTTCGACGGCTaGTGGAGACTCCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAAPFDG*WRLLTW
Trigger: CCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGG +
Preference number: 2 (lower is better)
Translates to: STGSAEPTSAHVARSVTPMETAV*HEGCGR
Trigger: CCGTCCACACCCTTCATGCCAGACCGCTGTCTCCAT...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATGCCAAGGATGGCTTTaGCAAACCGGTAAGGCGCAC +
Preference number: 2 (lower is better)
Translates to: STGSAEPTSAHVARSVTPCQGWL*QTGKAH
Trigger: GTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGG +
Preference number: 2 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAMETAV*HEGCGR
Trigger: CCGTCCACACCCTTCATGCCAGACCGCTGTCTCCAT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGG +
Preference number: 2 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLMETAV*HEGCGR
Trigger: CCGTCCACACCCTTCATGCCAGACCGCTGTCTCCAT...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGCCAAGGATGGCTTTaGCAAACCGGTAAGGCGCAC +
Preference number: 2 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCQGWL*QTGKAH
Trigger: GTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGA +
Preference number: 2 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYDSGLA*RVWTDG
Trigger: TCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGA +
Preference number: 2 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSDSGLA*RVWTDG
Trigger: TCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: STGSAEPTSAHVARSVTPARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTGGAGACTCCTCACCTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTWRLLT*KASSSY
Trigger: ATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGGAGACTCCTCACCTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQWRLLT*KASSSY
Trigger: ATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGA +
Preference number: 2 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVDSGLA*RVWTDG
Trigger: TCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: STGSAEPTSAHVARSVTPDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGCACCCTTCGACGGCTaGTGGAGACTCCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVAPFDG*WRLLTW
Trigger: CCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGG +
Preference number: 2 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYMETAV*HEGCGR
Trigger: CCGTCCACACCCTTCATGCCAGACCGCTGTCTCCAT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CAA 90 bp CTCTGCTCATGTCGCACGTTCAGTAACGCCATTGAGAATACTGCATaGTTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTC +
Preference number: 2 (lower is better)
Translates to: LCSCRTFSNAIENTA*LGVGTAPFDGCWRL
Trigger: GAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAACAATGCAGTATTCTCAATGGCGTTACTGAACGTGCGACATGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTPSMSS*SVTAAI
Trigger: TATAGCTGCTGTTACAGACCAAGAACTCATGGAAGG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGA +
Preference number: 2 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFDSGLA*RVWTDG
Trigger: TCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp GAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTGCAGGTGCGTCCACACCATGTaGAAACACTGTGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: EAIAHDRFPVAADGAFCRCVHTM*KHCGKG
Trigger: GCCTTTTCCACAGTGTTTGCACATGGTGTGGACGCA...CCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTGCCAAGGATGGCTTTaGCAAACCGGTAAGGCGCAC +
Preference number: 2 (lower is better)
Translates to: ETPHLESQQFLYSWFLFACQGWL*QTGKAH
Trigger: GTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPPSMSS*SVTAAI
Trigger: TATAGCTGCTGTTACAGACCAAGAACTCATGGAAGG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTGCCAAGGATGGCTTTaGCAAACCGGTAAGGCGCAC +
Preference number: 2 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHCQGWL*QTGKAH
Trigger: GTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp GAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTGCAGGCAAGGCTGCATATGCTaGAAAATGCTGCAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: EAIAHDRFPVAADGAFCRQGCIC*KMLQRV
Trigger: AACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTG...CCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CAA 90 bp GCAGCTGATGGAGCATTTTGCAGGTTTGTCCTGCAAGGTTATTTCTaGGGTGGCTATTCAGAGTTCTCACTGTCTCCGCTAGGCAGAACT +
Preference number: 2 (lower is better)
Translates to: AADGAFCRFVLQGYF*GGYSEFSLSPLGRT
Trigger: AGTTCTGCCTAGCGGAGACAGTGAGAACTCTGAATAGCCACCCAAGAAATAACCTTGCAGGACAAACCTGCAAAATGCTCCATCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGG +
Preference number: 2 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFMETAV*HEGCGR
Trigger: CCGTCCACACCCTTCATGCCAGACCGCTGTCTCCAT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTGGAGACTCCTCACCTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVWRLLT*KASSSY
Trigger: ATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTGGAGACTCCTCACCTaGAAAGCCAGCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVWRLLT*KASSSY
Trigger: ATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: ETPHLESQQFLYSWFLFADVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp GAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTGCAGGTGCAAGGTTATTTCTTaGGTGGCTATTCAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: EAIAHDRFPVAADGAFCRCKVIS*VAIQSS
Trigger: AGAACTCTGAATAGCCACCCAAGAAATAACCTTGCA...CCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGATGTAAGTGCTAGATaGCAAGGATGGCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQDVSAR*QGWLWQ
Trigger: TTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEPSMSS*SVTAAI
Trigger: TATAGCTGCTGTTACAGACCAAGAACTCATGGAAGG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTACCTTCCCACAAGCTTTaGGGGGAACTCTGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLPSHKL*GELCFC
Trigger: ACAGAAGCAGAGTTCCCCCCAAAGCTTGTGGGAAGG...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHPSMSS*SVTAAI
Trigger: TATAGCTGCTGTTACAGACCAAGAACTCATGGAAGG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCTTCCATGAGTTCTTaGTCTGTAACAGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPSMSS*SVTAAI
Trigger: TATAGCTGCTGTTACAGACCAAGAACTCATGGAAGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAGCTAGATGCCAAGGATaGCTTTGGCAAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLARCQG*LWQTGK
Trigger: CTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGC...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAACCTCAAATGTGACATaGCATGACAGCACACCTCAG +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLTSNVT*HDSTPQ
Trigger: CTGAGGTGTGCTGTCATGCCATGTCACATTTGAGGT...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CAA 90 bp CAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTATATACATGTTGTACACAGGATTACA +
Preference number: 2 (lower is better)
Translates to: QYILYSPPEWPFHEF*VCNSSYIHVVHRIT
Trigger: TGTAATCCTGTGTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR TCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAAAATGTGACATGGCATaGCAGCACACCTCAGAATCA +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLKCDMA*QHTSES
Trigger: TGATTCTGAGGTGTGCTGTCATGCCATGTCACATTT...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAATGCAATGTGCTGAATaGGCAGAGGGAAAAGAATCA +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLMQCAE*AEGKES
Trigger: TGATTCTTTTCCCTCTGCCCATTCAGCACATTGCAT...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR TCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAAGGGTTTTGTGTCAGTaGGTATTTGCTGAAGGAATA +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLRVLCQ*VFAEGI
Trigger: TATTCCTTCAGCAAATACTCACTGACACAAAACCCT...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTACAGTTCCTATACTCCTaGTTTTTGTTTGCTCATAAA +
Preference number: 2 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLQFLYS*FLFAHK
Trigger: TTTATGAGCAAACAAAAACCAGGAGTATAGGAACTG...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR TCA 72 bp ACCAGCGTGCTGTCAGGCACCTTTGGCTCCTGGATTTaGTGCCCGGGTACCCGGATGTCCAGACACTACGGA +
Preference number: 3 (lower is better)
Translates to: TSVLSGTFGSWI*CPGTRMSRHYG
Trigger: TCCGTAGTGTCTGGACATCCGGGTACCCGGGCATCAAATCCAGGAGCCAAAGGTGCCTGACAGCACGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR GCA 72 bp ACATTCCAGAAGCCATTACGGCCTCTAAACCATGGCTaGCGGGTGCTGCCGGCCTTACACCAGCGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: TFQKPLRPLNHG*RVLPALHQRAV
Trigger: GACAGCACGCTGGTGTAAGGCCGGCAGCACCCGGCAGCCATGGTTTAGAGGCCGTAATGGCTTCTGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 72 bp TACCACATTCCAGAAGCCATTACGGCCTCTAAACCATaGCTGCCGGGTGCTGCCGGCCTTACACCAGCGTGC +
Preference number: 3 (lower is better)
Translates to: YHIPEAITASKP*LPGAAGLTPAC
Trigger: GCACGCTGGTGTAAGGCCGGCAGCACCCGGCAGCCATGGTTTAGAGGCCGTAATGGCTTCTGGAATGTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR GCA 72 bp GCATTGTTAGGAGTCGGTACTGCACCCTTCGACGGCTaGTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: ALLGVGTAPFDG*WRLLTWKASSS
Trigger: GGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAACAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGPFHEF*VCNSSY
Trigger: ATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR GCA 72 bp TTTCAACACCGCTGGGGGTGCTGCGTCCACACCATGTaGAAACACTGTGGAAAAGGCCAAATGAGTGACCAG +
Preference number: 3 (lower is better)
Translates to: FQHRWGCCVHTM*KHCGKGQMSDQ
Trigger: CTGGTCACTCATTTGGCCTTTTCCACAGTGTTTGCACATGGTGTGGACGCAGCACCCCCAGCGGTGTTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR TCA 72 bp TTGTACACAGGATTACATGGAGACAGCGGTCTGGCATaGAGGGTGTGGACGGACGGACAGAAGGTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: LYTGLHGDSGLA*RVWTDGQKVLL
Trigger: AAGCAGAACCTTCTGTCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 72 bp CTATTCAGAGTTCTCACTGTCTCCGCTAGGCAGAACTaGGTGTTTACTGAGCACCGTGGCCCTTCCCACAAG +
Preference number: 3 (lower is better)
Translates to: LFRVLTVSARQN*VFTEHRGPSHK
Trigger: CTTGTGGGAAGGGCCACGGTGCTCAGTAAACACTCAGTTCTGCCTAGCGGAGACAGTGAGAACTCTGAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR GCA 72 bp AACTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTaGTCATGTCGCACGTTCAGTAACGCCATTGAGAAT +
Preference number: 3 (lower is better)
Translates to: NFTFHRERRTHL*SCRTFSNAIEN
Trigger: ATTCTCAATGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 72 bp ACATGTTGTACACAGGATTACATGGAGACAGCGGTCTaGCATGAAGGGTGTGGACGGACGGACAGAAGGTTC +
Preference number: 3 (lower is better)
Translates to: TCCTQDYMETAV*HEGCGRTDRRF
Trigger: GAACCTTCTGTCCGTCCGTCCACACCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 72 bp GTGTTTACTGAGCACCGTGGCCCTTCCCACAAGCTTTaGGGGGAACTCTGCTTCTGTGAAATCAGTGCGTTT +
Preference number: 3 (lower is better)
Translates to: VFTEHRGPSHKL*GELCFCEISAF
Trigger: AAACGCACTGATTTCACAGAAGCAGAGTTCCCCCCAAAGCTTGTGGGAAGGGCCACGGTGCTCAGTAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGCAGCTATATACATGTaGTACACAGGATTACATGGA +
Preference number: 3 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTAAIYM*YTGLHG
Trigger: TCCATGTAATCCTGTGTACAACATGTATATAGCTGC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCAGCTATATACATGTaGTACACAGGATTACATGGA +
Preference number: 3 (lower is better)
Translates to: STGSAEPTSAHVARSVTPAAIYM*YTGLHG
Trigger: TCCATGTAATCCTGTGTACAACATGTATATAGCTGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGCAGCTATATACATGTaGTACACAGGATTACATGGA +
Preference number: 3 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQAAIYM*YTGLHG
Trigger: TCCATGTAATCCTGTGTACAACATGTATATAGCTGC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAATTGAGAATACTGCATaGTTAGGAGTCGGTACTGCA +
Preference number: 3 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAIENTA*LGVGTA
Trigger: TGCAGTACCGACTCCTAACAATGCAGTATTCTCAAT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR GCA 72 bp CACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTaGAGGTTTGTCCTGCAAGGTTATTTCTTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: HDRFPVAADGAF*RFVLQGYFLGG
Trigger: GCCACCCAAGAAATAACCTTGCAGGACAAACCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCTATACTCCTGGTTTTaGTTTGCTCATAAAACAGCA +
Preference number: 3 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQLYSWF*FAHKTA
Trigger: TGCTGTTTTATGAGCAAACAAAAACCAGGAGTATAG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 72 bp GGAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTaGTGGAGCATTTTGCAGGTTTGTCCTGCAAGGTTA +
Preference number: 3 (lower is better)
Translates to: GSNCSRSVPSSS*WSILQVCPARL
Trigger: TAACCTTGCAGGACAAACCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 72 bp AGAGAAGAGGAGGGAGAAAAGCGTGAGATCAGCACCTaGTCTGCACGAGAAAACGGAAAGACCGACTTTACA +
Preference number: 3 (lower is better)
Translates to: REEEGEKREIST*SARENGKTDFT
Trigger: TGTAAAGTCGGTCTTTCCGTTTTCTCGTGCAGACCAGGTGCTGATCTCACGCTTTTCTCCCTCCTCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 72 bp AACAGCAGCTATATACATGTTGTACACAGGATTACATaGAGACAGCGGTCTGGCATGAAGGGTGTGGACGGA +
Preference number: 3 (lower is better)
Translates to: NSSYIHVVHRIT*RQRSGMKGVDG
Trigger: TCCGTCCACACCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAGCTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEPFHEF*VCNSSY
Trigger: ATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVPFHEF*VCNSSY
Trigger: ATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGG...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHPFHEF*VCNSSY
Trigger: ATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 72 bp CCAAATGTGACATGGCATGACAGCACACCTCAAATGTaGCATGGCATGACAGCACACCTCAGAATCACAACA +
Preference number: 3 (lower is better)
Translates to: PNVTWHDSTPQM*HGMTAHLRITT
Trigger: TGTTGTGATTCTGAGGTGTGCTGTCATGCCATGTCACATTTGAGGTGTGCTGTCATGCCATGTCACATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR GCA 72 bp GCAACAACAGAGACAGACAGACAGACAGAGATGGCTTaGAGAGAGCTTTATCACAGTGCAATTCATAGCAGC +
Preference number: 3 (lower is better)
Translates to: ATTETDRQTEMA*RELYHSAIHSS
Trigger: GCTGCTATGAATTGCACTGTGATAAAGCTCTCTGCAAGCCATCTCTGTCTGTCTGTCTGTCTCTGTTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR CCA 72 bp ATTTTGCAGGTTTGTCCTGCAAGGTTATTTCTTGGGTaGCTATTCAGAGTTCTCACTGTCTCCGCTAGGCAG +
Preference number: 3 (lower is better)
Translates to: ILQVCPARLFLG*LFRVLTVSARQ
Trigger: CTGCCTAGCGGAGACAGTGAGAACTCTGAATAGCCACCCAAGAAATAACCTTGCAGGACAAACCTGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR TCA 72 bp AAAAGTGTACTGATGCTTCATGGTAACTCCCAGGTATaGACGTGGGATTTAACTAGTGGCAGGCATGACTGG +
Preference number: 3 (lower is better)
Translates to: KSVLMLHGNSQV*TWDLTSGRHDW
Trigger: CCAGTCATGCCTGCCACTAGTTAAATCCCACGTTCATACCTGGGAGTTACCATGAAGCATCAGTACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGCAGCTATATACATGTaGTACACAGGATTACATGGA +
Preference number: 3 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEAAIYM*YTGLHG
Trigger: TCCATGTAATCCTGTGTACAACATGTATATAGCTGC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGACTCCTGGTTTTTGTTaGCTCATAAAACAGCACAGA +
Preference number: 3 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVTPGFC*LIKQHR
Trigger: TCTGTGCTGTTTTATGAGCAAACAAAAACCAGGAGT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCATTGAGAATACTGCATaGTTAGGAGTCGGTACTGCA +
Preference number: 3 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVIENTA*LGVGTA
Trigger: TGCAGTACCGACTCCTAACAATGCAGTATTCTCAAT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 72 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTaGTTTTTGTTTGCTCATAAAACAGCACAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: TPHLESQQFLYS*FLFAHKTAQRD
Trigger: ATCTCTCTGTGCTGTTTTATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CCA 72 bp CACAAGCAACAACAGAGACAGACAGACAGACAGAGATaGCTTGCAGAGAGCTTTATCACAGTGCAATTCATA +
Preference number: 3 (lower is better)
Translates to: HKQQQRQTDRQR*LAESFITVQFI
Trigger: TATGAATTGCACTGTGATAAAGCTCTCTGCAAGCCATCTCTGTCTGTCTGTCTGTCTCTGTTGTTGCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
3UTR-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGCAGCTATATACATGTaGTACACAGGATTACATGGA +
Preference number: 3 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHAAIYM*YTGLHG
Trigger: TCCATGTAATCCTGTGTACAACATGTATATAGCTGC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGACTCCTGGTTTTTGTTaGCTCATAAAACAGCACAGA +
Preference number: 3 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQTPGFC*LIKQHR
Trigger: TCTGTGCTGTTTTATGAGCAAACAAAAACCAGGAGT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR TCA 72 bp CTTCTGTGCTGTGCTCAAAATGAACTTAACCAAATGTaGCATGGCATGACAGCACACCTCAAATGTGACATG +
Preference number: 3 (lower is better)
Translates to: LLCCAQNELNQM*HGMTAHLKCDM
Trigger: CATGTCACATTTGAGGTGTGCTGTCATGCCATGTCACATTTGGTTAAGTTCATTTTGAGCACAGCACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR TCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGSRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVLFGGP*GSGLGG
Trigger: CCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSASRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCACCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCTTGTGTCCTGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLVSWW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCAGGACACAAG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQREVVG*EGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGREVVG*EGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACGGTGGTCTCGGCGATaGACTCGGACACGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVRWSRR*TRTRRS
Trigger: AGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGCVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCTTGTGTCCTGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQLVSWW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCAGGACACAAG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTATGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLFGGP*GSGLGG
Trigger: CCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSACVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGLPLEV*VPRGSV
Trigger: AACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTTGTGTCCTGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLVSWW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCAGGACACAAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACTTGTGTCCTGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVLVSWW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCAGGACACAAG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPREVVG*EGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCACTCTGGAGGAAAAACTaGAGAGCCGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSALWRKN*RAGRLK
Trigger: CTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAG...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLLPLEV*VPRGSV
Trigger: AACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLICAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACCCACCTTGCCGGCTCTaGGAGTCACTGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYPPCRL*ESLLAL
Trigger: CAGGGCTAACAGTGACTCTCAGAGCCGGCAAGGTGG...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000175799.8
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCCTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCCCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGLFGGP*GSGLGG
Trigger: CCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGSRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCTCTGGAGGAAAAACTaGAGAGCCGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQLWRKN*RAGRLK
Trigger: CTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCCGGCGTTCCGAGGTaGCAAAGGGGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPGVPR*QRGSLT
Trigger: AGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSASGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCACCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCGGTGGTCTCGGCGATaGACTCGGACACGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFRWSRR*TRTRRS
Trigger: AGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCGGTGGTCTCGGCGATaGACTCGGACACGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSERWSRR*TRTRRS
Trigger: AGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLICPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQLPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACGTCTCCCCGAGCTCCTaGCCAGGTTCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYVSPSS*PGSSSG
Trigger: GCCACTGCTGGAACCTGGGCAGGAGCTCGGGGAGAC...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGCAGATCCCCCAGCTaGGGCTTAGGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSRSPS*GLGGRS
Trigger: GGACCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGCCAGCCTGGGACTTTaGCAGCAGATCCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHASLGL*QQIPQL
Trigger: CAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFARVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKSDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CAA 72 bp TGTCGCACGTTCAGTAACGCCATTGAGAATACTGCATaGTTAGGAGTCGGTACTGCACCCTTCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: CRTFSNAIENTA*LGVGTAPFDGC
Trigger: GCAGCCGTCGAAGGGTGCAGTACCGACTCCTAACAATGCAGTATTCTCAATGGCGTTACTGAACGTGCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACGGTGGTCTCGGCGATaGACTCGGACACGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIRWSRR*TRTRRS
Trigger: AGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCGGTGGTCTCGGCGATaGACTCGGACACGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGRWSRR*TRTRRS
Trigger: AGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGTGTGCAGCCGCGTGGTaGAGCTGGACGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLCAAAW*SWTWWA
Trigger: CGCCCACCACGTCCAGCTTCACCACGCGGCTGCACA...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGGAGGGAGAAAAGCGTGAGATCAGCACCTGGTCTGCACGAGAAAACGGAAAGTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EEGEKREISTWSARENGKSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...CTTTCCGTTTTCTCGTGCAGACCAGGTGCTGATCTCACGCTTTTCTCCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR TCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFARRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFLFGGP*GSGLGG
Trigger: CCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCACTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSALSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: STGSAEPTSAHVARSVTPSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFACPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGCAAGGTTATTTCTTGGGTGGCTATTCAGAGTTCTCACTGTCTCCGCTAGGCCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LQGYFLGGYSEFSLSPLGHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...GCCTAGCGGAGACAGTGAGAACTCTGAATAGCCACCCAAGAAATAACCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQTPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSACFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIREVVG*EGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCACTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCCCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCCGATCCACCACTCCTaGTCCTCTTCCCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGPIHHS*SSSPVT
Trigger: TGTCACCGGGGAAGAGGACCAGGAGTGGTGGATCGG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFCPVEC*TLAVPA
Trigger: AGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLLFGGP*GSGLGG
Trigger: CCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAA...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHCVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQCVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCCCACCTTGCCGGCTCTaGGAGTCACTGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVPPCRL*ESLLAL
Trigger: CAGGGCTAACAGTGACTCTCAGAGCCGGCAAGGTGG...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000175799.8
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVFLQL*SRVVKL
Trigger: CAGCTTCACCACGCGGCTGCACAACTGCAGGAACAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSECRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGFSPVL*SPRKAM
Trigger: CATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCTCTGGAGGAAAAACTaGAGAGCCGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSELWRKN*RAGRLK
Trigger: CTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLTPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTATTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GCAGAGAGCTTTATCACAGTGCAATTCATAGCAGCGTCCCACAGCTCGGTTATACTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: AESFITVQFIAASHSSVILPLEV*VPRGSV
Trigger: AACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAG...TATAACCGAGCTGTGGGACGCTGCTATGAATTGCACTGTGATAAAGCTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGAGGAGGCCTCTTCTTaGATAGGGTGGAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQEEASS*IGWSCH
Trigger: GTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACTTGTGTCCTGGTGGTaGGGGAGGAGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLILVSWW*GRRPLL
Trigger: AAGAAGAGGCCTCCTCCCCCACCACCAGGACACAAG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYREVVG*EGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTGGTACGGGTGTCTCTaGCAGCGTGGGTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYWYGCL*QRGCEV
Trigger: GACCTCACACCCACGCTGCCAGAGACACCCGTACCA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCCTCCTCCAGCAGCGTaGCGGTGTTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFPPPAA*RCSCSC
Trigger: ACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLILLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTTGTTGCCCTGGAGCTaGTGCATGCTGTACCCACCT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVLLPWS*CMLYPP
Trigger: AGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCCGAAGATCTGGTTGGTaGAGGCTCCGTAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVRRSGW*RLRRRA
Trigger: GGCTCTCCTACGGAGCCTTCACCAACCAGATCTTCG...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVCVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFPGADA*CTHLAG
Trigger: GCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVAHFRL*HTFRIP
Trigger: TGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCTGCCTGTTGGAAGTTaGGTGGGAGATGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSELPVGS*VGDGQD
Trigger: ATCCTGACCATCTCCCACGCAACTTCCAACAGGCAG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTATTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACTCTGGAGGAAAAACTaGAGAGCCGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLILWRKN*RAGRLK
Trigger: CTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATCGGACACGGAGATCTaGTCCGGCATCCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISDTEI*SGIRFH
Trigger: ATGGAATCGGATGCCGGACCAGATCTCCGTGTCCGA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPTPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVCQLVL*RDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCTCCAACTTGGGGCTTaGGGGCCAGTTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFLQLGA*GPVPQA
Trigger: AGCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFADFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLAEPWQ*QLVLWR
Trigger: TCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGATTACCCCAAGGAATTaGGCCTTTGTTTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGITPRN*AFVWGP
Trigger: GGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAAT...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSELWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYHHGRP*LGPLLC
Trigger: GCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVYHLKG*ALVKGW
Trigger: CCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCCTGTGGCGAGATGCTaGAGGAGTGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFPVARC*RSGRSS
Trigger: AGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCCTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVLPLEV*VPRGSV
Trigger: AACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAG...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLPLEV*VPRGSV
Trigger: AACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGAGGGTGGCTGCACCTTaGCTGAGACATCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLRVAAP*LRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGATTTTTCTCGGCAGTaGTACGGGTGTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQDFSRQ*YGCLWQ
Trigger: CTGCCAGAGACACCCGTACCACTGCCGAGAAAAATC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTCACACATCTGGAGCTaGAAAAGCCGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSHIWS*KSRRSF
Trigger: AAAGGAACGGCGGCTTTTTCAGCTCCAGATGTGTGA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTATGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLCVTSV*PLRVAA
Trigger: TGCAGCCACCCTCAGAGGTCACACAGAGGTCACACA...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGC +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFCRTPC*PGADAC
Trigger: GCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTTCCCCACAGACGTTTaGTTATCCAGGTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVFPTDV*LSRFPQ
Trigger: CTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGTGTCCTGTGGCGAGATaGTGGAGGAGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLCPVAR*WRSGRS
Trigger: GCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACA...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVWLKAT*VLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GCAGAGAGCTTTATCACAGTGCAATTCATAGCAGCGTCCCACAGCTCGGTTATAGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: AESFITVQFIAASHSSVIAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...TATAACCGAGCTGTGGGACGCTGCTATGAATTGCACTGTGATAAAGCTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCAGTTTCTCCATTCTaGTTAACGATGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAAVSPF*LTMSTV
Trigger: CACCGTGGACATCGTTAACCAGAATGGAGAAACTGC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVAEAL*SGRAFL
Trigger: AAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAGGGGAGCCTCACTGGTaGGTGATGTGGGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLGEPHW*VMWANL
Trigger: CAGATTTGCCCACATCACCCACCAGTGAGGCTCCCC...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCAAGGGGGAGCCTCACTaGTGGGTGATGTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFKGEPH*WVMWAN
Trigger: ATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSQVGC*FCRGRD
Trigger: ATCTCTCCCTCGACAGAACCAACATCCCACCTGAGA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFALKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYFVQLC*GRGTGL
Trigger: AAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLSLTGG*CGQICA
Trigger: AGCACAGATTTGCCCACATCACCCACCAGTGAGGCT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGCCGTGCTGTTTTGCGTaGTCTCTTTTCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQPCCFA*SLFSFS
Trigger: TGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGG...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVVRIIP*CFACSL
Trigger: AAGAGAGCACGCAAAACAGCACGGGATGATCCGAAC...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVFNLAG*LLEVAW
Trigger: CCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGCTCTGGAGGAAAAACTaGAGAGCCGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLLWRKN*RAGRLK
Trigger: CTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAG...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSECFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGAGATGGAGAGATGTCTaGTCTGCGGTCCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLRWRDV*SAVLTA
Trigger: TGCCGTCAGGACCGCAGACCAGACATCTCTCCATCT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCTGAAAAGTCTCAGGTaGGATGTTGGTTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGLKSLR*DVGSVE
Trigger: CTCGACAGAACCAACATCCCACCTGAGACTTTTCAG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGCTGAGAGCTGTGGCTTaGGGGGCAGGTCACCTAATT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLLRAVA*GAGHLI
Trigger: AATTAGGTGACCTGCCCCCCAAGCCACAGCTCTCAG...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTCTGGACTGTACATTTaGAGACAGATCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSGLYI*RQIPGV
Trigger: CACACCGGGGATCTGTCTCCAAATGTACAGTCCAGA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGSDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISDACF*MASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CAA 72 bp GGAGCATTTTGCAGGTTTGTCCTGCAAGGTTATTTCTaGGGTGGCTATTCAGAGTTCTCACTGTCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: GAFCRFVLQGYF*GGYSEFSLSPL
Trigger: TAGCGGAGACAGTGAGAACTCTGAATAGCCACCCAAGAAATAACCTTGCAGGACAAACCTGCAAAATGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR TCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGTAAGTCCCTGGACTTaGTGGCCTCAAGCAATTCGT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFVSPWT*WPQAIR
Trigger: ACGAATTGCTTGAGGCCATCAAGTCCAGGGACTTAC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTACTCTACGTGGACATaGGGGTTGAACTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGYSTWT*GLNFPD
Trigger: ATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR TCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCTTAGTGCCACTTTCTaGGGTAGTTTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHLSATF*GSLGST
Trigger: AGTGCTTCCTAAACTACCTCAGAAAGTGGCACTAAG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFSKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASKYPS*LKATWV
Trigger: AACCCACGTGGCTTTCAACCAACTTGGGTATTTTGA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSETPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTGTTTCCTACATTCTTaGCCAGCAAGAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVCFLHS*PARVRK
Trigger: CTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GCAGAGAGCTTTATCACAGTGCAATTCATAGCAGCGTCCCACAGCTCGGTTATAAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: AESFITVQFIAASHSSVISRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...TATAACCGAGCTGTGGGACGCTGCTATGAATTGCACTGTGATAAAGCTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CAA 72 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTaGGTCTGTAACAGCAGCTATATACATGTTGTACAC +
Preference number: 4 (lower is better)
Translates to: LYSPPEWPFHEF*VCNSSYIHVVH
Trigger: GTGTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSELFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLSPSFH*RTPCCP
Trigger: AGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFESSDA*FWMASL
Trigger: CAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSIVNL*RKNWRA
Trigger: GGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTATTGTGGCTCAGACCCTaGAGCAGATTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLLWLRP*SRFFSS
Trigger: GCTGCTGAAAAATCTGCTCCAGGGTCTGAGCCACAA...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTGAAGATCACATTGTaGCTCAGACCCTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVKITL*LRPWSR
Trigger: TCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHPGFVK*LLEISF
Trigger: AAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHTPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYAPQTC*PSYLKI
Trigger: TATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGC...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
3UTR CAA 72 bp ACTCGCCATAAGATGTACAAACCCACTCATCTAAACTaGCACAAGGCTGCATATGCTGGAAAATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TRHKMYKPTHLN*HKAAYAGKCCR
Trigger: TCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAGATGAGTGGGTTTGTACATCTTATGGCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp CTGCAAGGTTATTTCTTGGGTGGCTATTCAGAGTTCTCACTGTCTCCGCTAGGCTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LQGYFLGGYSEFSLSPLGSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...GCCTAGCGGAGACAGTGAGAACTCTGAATAGCCACCCAAGAAATAACCTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: LLTWKASSSYTPGFCLLILGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATC +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVGVFR*LLLDGI
Trigger: GATGCCATCCAGAAGCAAGCATCTGAAGACTCCAAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACACCCCCATTTCCCTATaGATTCCGGAACATTCTATA +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYTPISL*IPEHSI
Trigger: TATAGAATGTTCCGGAATCCATAGGGAAATGGGGGT...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTGGACAAAGGACACTaGAAAGACACCCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVDKGH*KDTLPF
Trigger: GAAAGGAAGGGTGTCTTTCCAGTGTCCTTTGTCCAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCTTTTCCATTTCTTCTaGAATCTCAGCGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLFHFF*NLSACY
Trigger: ATAACAGGCGCTGAGATTGCAGAAGAAATGGAAAAG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTACTTTATAAGGTTCTaGAGCAGGTCCACACCCTTT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFYFIRF*SRSTPF
Trigger: AAAGGGTGTGGACCTGCTGCAGAACCTTATAAAGTA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSFESL*YIQGSF
Trigger: GAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCT...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFFVVII*LAVING
Trigger: ACCATTTATGACTGCCAGGCAGATAATGACGACGAA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFSRSSH*VALSLF
Trigger: AAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTTCCAGATTTAGCCTaGGAAAGCAGATCTTCACAC +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFFPDLA*ESRSSH
Trigger: GTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTATCTGGATGGCATCTCTaGACTGTACATTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLSGWHL*TVHLET
Trigger: TGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGA...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR GCA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATA +
Preference number: 4 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFLGPLL*YSSVLI
Trigger: TATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CCA 90 bp TGCCAAGATTATCTGTTTAAGAGTATTTTCTTCTGTGCTGTGCTCAAAATGAACCCTGGCAGTCATAAATaGTCTTCACCCGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: CQDYLFKSIFFCAVLKMNPGSHK*SSPASL
Trigger: AAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGG...GTTCATTTTGAGCACAGCACAGAAGAAAATACTCTTAAACAGATAATCTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR GCA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSFGSS*REDFIR
Trigger: TCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GTGACCTCTGAGGGTGGCTGCACCTTGGCTGAGACATCGCCAGCCTaGGACTTTGCCAGCAGATCCCCCAGCTGCGGCTTAGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: VTSEGGCTLAETSPA*DFASRSPSCGLGGR
Trigger: CCTGCCCCCTAAGCCGCAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTCAGAGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GGCTCCGTAGGAGAGCCGCTGCTTGTCCCGTGGAGTGCTGAACCCTaGCAGTGCCAGCTTGTCCTGTGGCGAGATGCTGGAGGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: GSVGEPLLVPWSAEP*QCQLVLWRDAGGVA
Trigger: TGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCTCTCCTACGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GTAGGAGAGCCGCTGCTTGTCCCGTGGAGTGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGAGATGCTGGAGGAGTGGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VGEPLLVPWSAEPWQ*QLVLWRDAGGVAEA
Trigger: AGCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCTCTCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp CCCAAGGAATTGCGCCTTTGTTTGGGGGCCCGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTCTCTTGTGTCCTGGTGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PKELRLCLGAREVVG*EGQTGFSCVLVVGE
Trigger: CTCCCCCACCACCAGGACACAAGAGAACCCTGTCTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GACAGATCCCCGGTGTGTGACCTCTGTGTGACCTCTGAGGGTGGCTaGACCTTGGCTGAGACATCGCCAGCCTGGGACTTTGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: DRSPVCDLCVTSEGG*TLAETSPAWDFASR
Trigger: TCTGCTGGCAAAGTCCCAGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTCAGAGGTCACACAGAGGTCACACACCGGGGATCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GATCTGGTTGGTGAAGGCTCCGTAGGAGAGCCGCTGCTTGTCCCGTaGAGTGCTGAACCCTGGCAGTGCCAGCTTGTCCTGTGGCGAGAT +
Preference number: 5 (lower is better)
Translates to: DLVGEGSVGEPLLVP*SAEPWQCQLVLWRD
Trigger: ATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCTCTCCTACGGAGCCTTCACCAACCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTHAVPT*PALRVT
Trigger: CGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp AACCCTGGCAGTGCCAGCTTGTCCTGTGGCGAGATGCTGGAGGAGTaGCAGAAGCTCTGTGGTCTGGGCGAGCGTTCCTTTTTGATCGGG +
Preference number: 5 (lower is better)
Translates to: NPGSASLSCGEMLEE*QKLCGLGERSFLIG
Trigger: CCCGATCAAAAAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp TTTCCCGGCGTTCCGAGGTGGCAAAGGGGGAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCTCGTAGAGGCGAAGATCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: FPGVPRWQRGSLTGG*CGQICARRGEDLVG
Trigger: ACCAACCAGATCTTCGCCTCTACGAGCACAGATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTTTGCCACCTCGGAACGCCGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GGAGGAGGCCTCTTCTTGGATAGGGTGGAGCTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTTGAAGGTGGGCCAGTTGGACCTTTC +
Preference number: 5 (lower is better)
Translates to: GGGLFLDRVELPLEV*VPRGSVEGGPVGPF
Trigger: GAAAGGTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSATVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACATGCTGTACCCACCTaGCCGGCTCTGAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLHAVPT*PALRVT
Trigger: CGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTGCCTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp CCCACATCATTACCCCAAGGAATTGCGCCTTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGGTCAGACAGGGTTCTCTTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PTSLPQGIAPLFGGP*GSGLGGSDRVLLCP
Trigger: AGGACACAAGAGAACCCTGTCTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp TGGACTGTACATTTGGAGACAGATCCCCGGTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCACCTTGGCTGAGACATCGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: WTVHLETDPRCVTSV*PLRVAAPWLRHRQP
Trigger: AGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTCAGAGGTCACACAGAGGTCACACACCGGGGATCTGTCTCCAAATGTACAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp CAGCTTGTCCTGTGGCGAGATGCTGGAGGAGTGGCAGAAGCTCTGTaGTCTGGGCGAGCGTTCCTTTTTGATCGGGCTTGGCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: QLVLWRDAGGVAEAL*SGRAFLFDRAWLVI
Trigger: GATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGCCTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSACLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKHAVPT*PALRVS
Trigger: AGAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000175793.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS TCA 90 bp GTACAAGGAAATCAACCAGATGGAGAGATGTCTGGTCTGCGGTCCTaGCGGCAAGATGAAGGGCTGTCTCCCCGAGCTCCTGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VQGNQPDGEMSGLRS*RQDEGLSPRAPAQV
Trigger: AACCTGGGCAGGAGCTCGGGGAGACAGCCCTTCATCTTGCCGTCAGGACCGCAGACCAGACATCTCTCCATCTGGTTGATTTCCTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp CTAGTCCTTGGGATTGGCCTCCAGGAGCCCTTGAAAGCGTATGACTaGCCTCCATTAAAGCCTGCTTTGGAAGGCAAGCCCTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LVLGIGLQEPLKAYD*PPLKPALEGKPCGP
Trigger: TGGGCCACAGGGCTTGCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAAGGGCTCCTGGAGGCCAATCCCAAGGACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATGCCTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTACATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAAGCAATTGCTCACGATCGGTTCCCAGTAGCAGCTGATGGAGCATTTTGCAGGTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: EAIAHDRFPVAADGAFCRSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...CCTGCAAAATGCTCCATCAGCTGCTACTGGGAACCGATCGTGAGCAATTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp CATCCTAGTCCTTGGGATTGGCCTCCAGGAGCCCTTGAAAGCGTATaGCTGGCCTCCATTAAAGCCTGCTTTGGAAGGCAAGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: HPSPWDWPPGALESV*LASIKACFGRQALW
Trigger: CCACAGGGCTTGCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAAGGGCTCCTGGAGGCCAATCCCAAGGACTAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS GCA 90 bp TCTTCTTCAGCAGGAAGCCCTTCTTTTCACTGCCGTACTCCTTGTTaGCCTGGAGCTGATGCATGCTGTACCCACCTTGCCGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SSSAGSPSFHCRTPC*PGADACCTHLAGSE
Trigger: CTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCTTCCTGCTGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp CAGGTGAGGAGGTTTAACTTAGCAGGCTGCCTGTTGGAAGTTGCGTaGGAGATGGTCAGGATCCCGTTCTTGACCGCACACTTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: QVRRFNLAGCLLEVA*EMVRIPFLTAHFRL
Trigger: GAGACGGAAGTGTGCGGTCAAGAACGGGATCCTGACCATCTCCCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAACCTCCTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GGCAGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGTACATTTGGAGACAGATCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: GSVGVRSLESSDACF*MASLDCTFGDRSPV
Trigger: CACCGGGGATCTGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSALKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTATTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPCWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTCWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LDAKDGFGKPVRRTRSRGDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...ACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTATCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLSFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAATCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKSFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSERQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQHAVPT*PALRVF
Trigger: GAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110115.9
ENSMUST00000177083.8
CDS GCA 90 bp TCCGGATCCCATCACTCTTCTTCAGCAGGAAGCCCTTCTTTTCACTaGCGTACTCCTTGTTGCCCTGGAGCTGATGCATGCTGTACCCAC +
Preference number: 5 (lower is better)
Translates to: SGSHHSSSAGSPSFH*RTPCCPGADACCTH
Trigger: GTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTGAAAAGAAGGGCTTCCTGCTGAAGAAGAGTGATGGGATCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GGGTGTCTCTGGCAGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATCTCTGGACTGTACATTTGGAGACAG +
Preference number: 5 (lower is better)
Translates to: GCLWQRGCEVVGVFR*LLLDGISGLYIWRQ
Trigger: CTGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCCAGAGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp CCTCCAGGCTATTCTCCCCTGTGCTCTGCTCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGCTATTCGTCAGTACTGATATCCACG +
Preference number: 5 (lower is better)
Translates to: PPGYSPLCSAHHGRP*LGPLLCYSSVLIST
Trigger: CGTGGATATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAATAGCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSASSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCAGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTGCCTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp CCTTCTTTTCACTGCCGTACTCCTTGTTGCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGCTCTGAGAGTCACGTATTACACTGT +
Preference number: 5 (lower is better)
Translates to: PSFHCRTPCCPGADA*CTHLAGSESHVLHC
Trigger: ACAGTGTAATACGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTGAAAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS GCA 90 bp GCATTCGGTTTCACTTGGCAGGTGAGGAGGTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGGGAGATGGTCAGGATCCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AFGFTWQVRRFNLAG*LLEVAWEMVRIPFL
Trigger: CAAGAACGGGATCCTGACCATCTCCCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAACCTCCTCACCTGCCAAGTGAAACCGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp ATGATGGCTTTGGTAAGGTCCTCCAGGCTATTCTCCCCTGTGCTCTaGTCACCACGGAAGGCCATGGTTAGGGCCTCTTCTTTGCTATTC +
Preference number: 5 (lower is better)
Translates to: MMALVRSSRLFSPVL*SPRKAMVRASSLLF
Trigger: GAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAATAGCCTGGAGGACCTTACCAAAGCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp ACAGTTTTGTACAAGGAAATCAACCAGATGGAGAGATGTCTGGTCTaGGGTCCTGACGGCAAGATGAAGGGCTGTCTCCCCGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: TVLYKEINQMERCLV*GPDGKMKGCLPELL
Trigger: CAGGAGCTCGGGGAGACAGCCCTTCATCTTGCCGTCAGGACCGCAGACCAGACATCTCTCCATCTGGTTGATTTCCTTGTACAAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GTCTCTGGCAGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTGGACTGTACATTTGGAGACAGATCC +
Preference number: 5 (lower is better)
Translates to: VSGSVGVRSLESSDA*FWMASLDCTFGDRS
Trigger: GGATCTGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp CCTTCTTTTCACTGCCGTACTCCTTGTTGCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGCTCTGAGAGTCTTCTTTCGGATCAA +
Preference number: 5 (lower is better)
Translates to: PSFHCRTPCCPGADA*CTHLAGSESLLSDQ
Trigger: TTGATCCGAAAGAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTGAAAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110115.9
ENSMUST00000177035.8
ENSMUST00000177083.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFATVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTATTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCATCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPSSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSAVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTTTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LYVPPGAQNPPLLMSHVQSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...CTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATACCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCATGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSACWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSASPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp AGGCACAGGTCTTCCTGGAGAAGCGGTGGTCGACATACTTTGCAGTaGTGTACTCTTTACGCACGGTCATATCACTTGAAGGGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: RHRSSWRSGGRHTLQ*CTLYARSYHLKGWA
Trigger: AGCCCACCCCTTCAAGTGATATGACCGTGCGTAAAGAGTACATCACTGCAAAGTATGTCGACCACCGCTTCTCCAGGAAGACCTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LHPSTAAGDSSPGKPAVPRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...AGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSARSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAACGCCACTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: STGSAEPTSAHVARSVTPLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...TGGCGTTACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCAGAACCCTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: LQAGWPGTNFTFHRERRTLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...GGTTCTGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTAGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACGTTCCACCGGGAGCGCAGAACCCACCTCTGCTCATGTCGCACGTTCAGTAGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: LRSTGSAEPTSAHVARSVVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...TACTGAACGTGCGACATGAGCAGAGGTGGGTTCTGCGCTCCCGGTGGAACGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTTGAAGGTGGGCCAGTaGGACCTTTCCCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQLKVGQ*DLSRRS
Trigger: GGAACGCCGGGAAAGGTCCAACTGGCCCACCTTCAA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTCTCCAACTTGGGGCTaGGGGGCCAGTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSPTWG*GASSTG
Trigger: GCCTGTGGAACTGGCCCCCAAGCCCCAAGTTGGAGA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFEGGCT*AETSPA
Trigger: GGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAHAVPT*PALRVS
Trigger: AGAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000175793.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYTVFLQ*CSRVVK
Trigger: CTTCACCACGCGGCTGCACAACTGCAGGAACACCGT...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGCGCCAGCCTGGGACTTaGCCAGCAGATCCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLRQPGT*PADPPA
Trigger: AGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCG...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHHAVPT*PALRVF
Trigger: GAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000110115.9
ENSMUST00000177083.8
CDS CCA 90 bp TTCAGCTTTGCTGAGGAAGAGGCACAGGTCTTCCTGGAGAAGCGGTaGTCGACATACTTTGCAGTGATGTACTCTTTACGCACGGTCATA +
Preference number: 5 (lower is better)
Translates to: FSFAEEEAQVFLEKR*STYFAVMYSLRTVI
Trigger: TATGACCGTGCGTAAAGAGTACATCACTGCAAAGTATGTCGACCACCGCTTCTCCAGGAAGACCTGTGCCTCTTCCTCAGCAAAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFAKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAAAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQRSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTCCCGAGGTTACTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: RCQGWLWQTGKAHQVPRLLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...TAACCTCGGGACCTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATAACTACAGGCTGGCTGGCCAGGGACTAACTTTACGTTCCACCGGGAGCGCACTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: DNYRLAGQGLTLRSTGSALLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...TGCGCTCCCGGTGGAACGTAAAGTTAGTCCCTGGCCAGCCAGCCTGTAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTAGGAGTCGGTACTGCACCCTTCGACGGCTGCTGGAGACTCCTCACCTGGAAACTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: LGVGTAPFDGCWRLLTWKLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...TTTCCAGGTGAGGAGTCTCCAGCAGCCGTCGAAGGGTGCAGTACCGACTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGCACGGTCATATCACTaGAAGGGGTGGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVARSYH*KGWALV
Trigger: CACCAAAGCCCACCCCTTCAAGTGATATGACCGTGC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GATGTAAGTGCTAGATGCCAAGGATGGCTTTGGCAAACCGGTAAGGCGCACCAGTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: DVSARCQGWLWQTGKAHQSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...CTGGTGCGCCTTACCGGTTTGCCAAAGCCATCCTTGGCATCTAGCACTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLPGSAS*SCGEML
Trigger: CAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGG...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGTCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GCAGAGAGCTTTATCACAGTGCAATTCATAGCAGCGTCCCACAGCTCGGTTATATCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: AESFITVQFIAASHSSVISFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...TATAACCGAGCTGTGGGACGCTGCTATGAATTGCACTGTGATAAAGCTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp CTGTGCTCTGCTCACCACGGAAGGCCATGGTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATATCCACGCTATATAATCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LCSAHHGRPWLGPLL*YSSVLISTLYNPAH
Trigger: ATGAGCAGGATTATATAGCGTGGATATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTGAGCAGAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFSSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GTAAGGCGCACCAGGTCCCGAGGTTACCCTAATACTGGTGAAGGCAGAAGACCAAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: VRRTRSRGYPNTGEGRRPRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...TGGTCTTCTGCCTTCACCAGTATTAGGGTAACCTCGGGACCTGGTGCGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSRSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYRSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSESKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTGCCTAGAGGGAGTGTaGAAGGTGGGCCAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFCLEGV*KVGQLD
Trigger: GTCCAACTGGCCCACCTTCAACACTCCCTCTAGGCA...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTAGGAGGAGGCCTCTTCTaGGATAGGGTGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLGGGLF*DRVELP
Trigger: TGGCAGCTCCACCCTATCCAAGAAGAGGCCTCCTCC...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFELRLC*GAREVV
Trigger: CACTACCTCACGGGCCCCCAAACAAAGGCGCAATTC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFHAVPT*PALRVS
Trigger: AGAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000175793.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS CCA 90 bp ACTCTGTCAACTGTGATGATTTCTGAAAAGTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGATGATGGCTGGTCTCCGTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: TLSTVMISEKSQVGC*FCRGRDDGWSPSSL
Trigger: TAAGGAAGACGGAGACCAGCCATCATCTCTCCCTCGACAGAACCAACATCCCACCTGAGACTTTTCAGAAATCATCACAGTTGACAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAAGGTGAAGATCACATaGTGGCTCAGACCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVKVKIT*WLRPWS
Trigger: GCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLISSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTCATCCCGTGCTGTTTaGCGTGCTCTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGSSRAV*RALFSP
Trigger: AGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTTGAAGGGGTGGGCTTaGGTGAAGGGCTGGGTAAAT +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLKGWA*VKGWVN
Trigger: ATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFHYPKE*RLCLGA
Trigger: GGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFACWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVCWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFASPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLIGVFRC*LLDGIS
Trigger: AGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCC...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 90 bp TCCATCTCGTCCTGTCGAAGATTCCACTCATACTCTACGTGGACATaGGGGTTGAACTTTCCAGATTTAGCCTGGGAAAGCAGATCTTCA +
Preference number: 5 (lower is better)
Translates to: SISSCRRFHSYSTWT*GLNFPDLAWESRSS
Trigger: TGAAGATCTGCTTTCCCAGGCTAAATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTATGAGTGGAATCTTCGACAGGACGAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp AGCCTGGGAAAGCAGATCTTCACACTGGGTAGCTTTGAGTCTCTTTaGTATATCCAAGGCAGTTTCTCCATTCTGGTTAACGATGTCCAC +
Preference number: 5 (lower is better)
Translates to: SLGKQIFTLGSFESL*YIQGSFSILVNDVH
Trigger: GTGGACATCGTTAACCAGAATGGAGAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCTTTCCCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 90 bp GATATCAGGTCAAAAGACTTCTTGTCCTCAGCATTCGGTTTCACTTaGCAGGTGAGGAGGTTTAACTTAGCAGGCTGCCTGTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: DIRSKDFLSSAFGFT*QVRRFNLAGCLLEV
Trigger: AACTTCCAACAGGCAGCCTGCTAAGTTAAACCTCCTCACCTGCCAAGTGAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: PLLSGPSMSSWSVTAAIYRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...GTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LYSPPEWPFHEFLVCNSSRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...GCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFARSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFRSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVRSKDF*SSAFGF
Trigger: GAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCT...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGAGGTTAGGGCCTCTTCTTaGCTATTCGTCAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: LHKAAYAGKCCRGFCVSEVRASS*LFVSTD
Trigger: ATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAAC...CTCACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: ETPHLESQQFLYSWFLFALFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...AGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGTAAGTCCCTGGACTaGATGGCCTCAAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSKSLD*MASSNS
Trigger: CGAATTGCTTGAGGCCATCAAGTCCAGGGACTTACT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQCWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGCWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATGTTGGCCGTCTTACTaGAAGATAATGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLICWPSY*KIMGPH
Trigger: ATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCGACAGCCCCTCAAACTaGTTGGCCGTCTTACTTGAA +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVDSPSN*LAVLLE
Trigger: TTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTC...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVGVRS*ESSDAC
Trigger: GCAAGCATCTGAAGACTCCAACGACCTCACACCCAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTTGTCAAATGGCTTCTaGAGATCTCCTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVLSNGF*RSPLTP
Trigger: GGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTATATACATGTTGTACACAGGATTACATGGAGACAGCGGTCTGGCATGAAGGGTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: LYTCCTQDYMETAVWHEGLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...CCCTTCATGCCAGACCGCTGTCTCCATGTAATCCTGTGTACAACATGTATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: LLTWKASSSYTPGFCLLILFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: KLAQGCICWKMLQRVLCQSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...CTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGTCCTTCATCTGTGGCTaGGGAGGTAAGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLSFICG*GGKSES
Trigger: GCTCTCAGACTTACCTCCCAAGCCACAGATGAAGGA...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTGGAGACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LETPHLESQQFLYSWFLFRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...AAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGTCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TGCCAAGATTATCTGTTTAAGAGTATTTTCTTCTGTGCTGTGCTCAAAATGAACGCTGCCTGTTGGAAGTaGCGTGGGAGATGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: CQDYLFKSIFFCAVLKMNAACWK*RGRWSG
Trigger: TCCTGACCATCTCCCACGCAACTTCCAACAGGCAGC...GTTCATTTTGAGCACAGCACAGAAGAAAATACTCTTAAACAGATAATCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CAA 90 bp ACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGTGCTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: TCTRLHMLENAAEGFVSVLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...CACTGACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLIPHRR*LIQVPT
Trigger: TGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAAT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCC +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVSHWVA*SLFAIS
Trigger: GGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGA...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GCCCTGCTGGCAACATATAAACCACCTACTTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGATCTCGGAGTGCAGTTAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: ALLATYKPPTSFGSS*REDFIRSRSAVSCF
Trigger: AAAACAGCTAACTGCACTCCGAGATCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGAAGTAGGTGGTTTATATGTTGCCAGCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVSVEN*TKAVPR
Trigger: CCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ACTCCTCACCTGGAAAGCCAGCAGTTCCTATACTCCTGGTTTTTGTTTGCTCATAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: TPHLESQQFLYSWFLFAHRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...ATGAGCAAACAAAAACCAGGAGTATAGGAACTGCTGGCTTTCCAGGTGAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp CTAAACTTGCACAAGGCTGCATATGCTGGAAAATGCTGCAGAGGGTTTTGTGTCAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LNLHKAAYAGKCCRGFCVRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...GACACAAAACCCTCTGCAGCATTTTCCAGCATATGCAGCCTTGTGCAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAAAATACCCAAGTaGGTTGAAAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLVKIPK*VESHVG
Trigger: ACCCACGTGGCTTTCAACCAACTTGGGTATTTTGAC...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGAGCCCCTCAAACTTGTaGGCCGTCTTACTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: YLQYILYSPPEWPFHEFLSPSNL*AVLLED
Trigger: ATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCT...CAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp GCAAGAGTTCGGAAGTTCCTAATTTGTCTAGTTCCAAAGACTGAATaGGAGAAATATGAACCCCCATTTCCCTATGGATTCCGGAACATT +
Preference number: 5 (lower is better)
Translates to: ARVRKFLICLVPKTE*EKYEPPFPYGFRNI
Trigger: AATGTTCCGGAATCCATAGGGAAATGGGGGTTCATATTTCTCGCATTCAGTCTTTGGAACTAGACAAATTAGGAACTTCCGAACTCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 90 bp AATGATCACTTCCCCCTCAATAAATGTGAGTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGTCTTCACCCGCCTCACTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: NDHFPLNKCEFVVII*LAVINGLHPPHFIF
Trigger: AAAAATAAAGTGAGGCGGGTGAAGACCATTTATGACTGCCAGGCAGATAATGACGACGAACTCACATTTATTGAGGGGGAAGTGATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp TTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCTTGGTCAGGTCCACACCCTTTTaGGTCTTGATTTCATTTACT +
Preference number: 5 (lower is better)
Translates to: LQYILYSPPEWPFHEFLVRSTPF*VLISFT
Trigger: AGTAAATGAAATCAAGACCAAAAAGGGTGTGGACCT...GACCAAGAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp AGTGGCCCTTCCATGAGTTCTTGGTCTGTAACAGCAGCTATATACATGTTGTACCTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: SGPSMSSWSVTAAIYMLYLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...GTACAACATGTATATAGCTGCTGTTACAGACCAAGAACTCATGGAAGGGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS-3UTR CAA 90 bp ATGTACAAAACTGTAGATAGTGGCTTACCCCGTTCCAGAACAAGGTCAGATTTATTGTTTCCTACATTCTaGGCCAGCAAGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: MYKTVDSGLPRSRTRSDLLFPTF*ASKSSE
Trigger: TTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAA...TAAATCTGACCTTGTTCTGGAACGGGGTAAGCCACTATCTACAGTTTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177371.8
CDS-3UTR CAA 90 bp GGATATTTACAATACATACTATATTCCCCTCCTGAGTGGCCCTTCCATGAGTTCCTGCTCATCTTCTGCTaGAAAGTGATATGTTCGATT +
Preference number: 5 (lower is better)
Translates to: GYLQYILYSPPEWPFHEFLLIFC*KVICSI
Trigger: AATCGAACATATCACTTTCAAGCAGAAGATGAGCAG...GAACTCATGGAAGGGCCACTCAGGAGGGGAATATAGTATGTATTGTAAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp GCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTTGTaGAGCCGCGTGGTGAAGCTGGACGTGGTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: ASSSSVTVFLQL*SRVVKLDVVGE
Trigger: CTCGCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000175963.2
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp AGAGCCTCCTCCAGCAGCGTGACGGTGTTCCTGCAGTaGTGCAGCCGCGTGGTGAAGCTGGACGTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: RASSSSVTVFLQ*CSRVVKLDVVG
Trigger: GCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTGCTGGAGGAGGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000175963.2
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp CTCCGTAGGAGAGCCGCTGCTTGTCCCGTGGAGTGCTaGACCCTGGCAGTGCCAGCTTGTCCTGTGGCGAGA +
Preference number: 6 (lower is better)
Translates to: LRRRAAACPVEC*TLAVPACPVAR
Trigger: TCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCTCTCCTACGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp CCGCTGCTTGTCCCGTGGAGTGCTGAACCCTGGCAGTaGCAGCTTGTCCTGTGGCGAGATGCTGGAGGAGTG +
Preference number: 6 (lower is better)
Translates to: PLLVPWSAEPWQ*QLVLWRDAGGV
Trigger: CACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GGTGAAGGCTCCGTAGGAGAGCCGCTGCTTGTCCCGTaGAGTGCTGAACCCTGGCAGTGCCAGCTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GEGSVGEPLLVP*SAEPWQCQLVL
Trigger: CAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCTCTCCTACGGAGCCTTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GAGGGTGGCTGCACCTTGGCTGAGACATCGCCAGCCTaGGACTTTGCCAGCAGATCCCCCAGCTGCGGCTTA +
Preference number: 6 (lower is better)
Translates to: EGGCTLAETSPA*DFASRSPSCGL
Trigger: TAAGCCGCAGCTGGGGGATCTGCTGGCAAAGTCCCAGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp TCCCCGGTGTGTGACCTCTGTGTGACCTCTGAGGGTGGCTGCACCTaGGCTGAGACATCGCCAGCCTGGGACTTTGCCAGCAGATCCCCC +
Preference number: 6 (lower is better)
Translates to: SPVCDLCVTSEGGCT*AETSPAWDFASRSP
Trigger: GGGGGATCTGCTGGCAAAGTCCCAGGCTGGCGATGTCTCAGCCAAGGTGCAGCCACCCTCAGAGGTCACACAGAGGTCACACACCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp AGCCGCTGCTTGTCCCGTGGAGTGCTGAACCCTGGCAGTGCCAGCTaGTCCTGTGGCGAGATGCTGGAGGAGTGGCAGAAGCTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: SRCLSRGVLNPGSAS*SCGEMLEEWQKLCG
Trigger: ACCACAGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCACGGGACAAGCAGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TGGAGTGCTGAACCCTGGCAGTGCCAGCTTGTCCTGTaGCGAGATGCTGGAGGAGTGGCAGAAGCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: WSAEPWQCQLVL*RDAGGVAEALW
Trigger: CCACAGAGCTTCTGCCACTCCTCCAGCATCTCGCCACAGGACAAGCTGGCACTGCCAGGGTTCAGCACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TTGCGCCTTTGTTTGGGGGCCCGTGAGGTAGTGGGCTaGGAGGGTCAGACAGGGTTCTCTTGTGTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: LRLCLGAREVVG*EGQTGFSCVLV
Trigger: CACCAGGACACAAGAGAACCCTGTCTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp GGCCCACATCATTACCCCAAGGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTGGGCTGGGAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: GPHHYPKELRLC*GAREVVGWEGQ
Trigger: CTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATGATGTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp TTACCCCAAGGAATTGCGCCTTTGTTTGGGGGCCCGTaGGGTAGTGGGCTGGGAGGGTCAGACAGGGTTCTC +
Preference number: 6 (lower is better)
Translates to: LPQGIAPLFGGP*GSGLGGSDRVL
Trigger: GAGAACCCTGTCTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp CTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCACTGTTAGCCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LVALELMHAVPT*PALRVTVSPAG
Trigger: GCCAGCAGGGCTAACAGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000177371.8
CDS CAA 90 bp GCCGTACTCCTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCACGTATTACACTGTTAGCCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: AVLLVALELMHAVPT*PALRVTYYTVSPAG
Trigger: GCCAGCAGGGCTAACAGTGTAATACGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS CAA 90 bp CTCGGCAGTGGTACGGGTGTCTCTGGCAGCGTGGGTGTGAGGTCGTaGGAGTCTTCAGATGCTTGCTTCTGGATGGCATCTCTGGACTGT +
Preference number: 6 (lower is better)
Translates to: LGSGTGVSGSVGVRS*ESSDACFWMASLDC
Trigger: ACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCCAGAGACACCCGTACCACTGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp GTTCCGAGGTGGCAAAGGGGGAGCCTCACTGGTGGGTaGTGTGGGCAAATCTGTGCTCGTAGAGGCGAAGAT +
Preference number: 6 (lower is better)
Translates to: VPRWQRGSLTGG*CGQICARRGED
Trigger: ATCTTCGCCTCTACGAGCACAGATTTGCCCACATCACCCACCAGTGAGGCTCCCCCTTTGCCACCTCGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp CACTGCCGTACTCCTTGTTGCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGCTCTGAGAGTCACGTA +
Preference number: 6 (lower is better)
Translates to: HCRTPCCPGADA*CTHLAGSESHV
Trigger: TACGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS GCA 72 bp CACTGCCGTACTCCTTGTTGCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGCTCTGAGAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: HCRTPCCPGADA*CTHLAGSESLF
Trigger: GAAGAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000175793.8
ENSMUST00000176384.8
ENSMUST00000177374.8
CDS CAA 90 bp AAGATAATGGGCCCACATCATTACCCCAAGGAATTGCGCCTTTGTTaGGGGGCCCGTGAGGTAGTGGGCTGGGAGGGTCAGACAGGGTTC +
Preference number: 6 (lower is better)
Translates to: KIMGPHHYPKELRLC*GAREVVGWEGQTGF
Trigger: GAACCCTGTCTGACCCTCCCAGCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATGATGTGGGCCCATTATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp AATCAACCAGATGGAGAGATGTCTGGTCTGCGGTCCTaGCGGCAAGATGAAGGGCTGTCTCCCCGAGCTCCT +
Preference number: 6 (lower is better)
Translates to: NQPDGEMSGLRS*RQDEGLSPRAP
Trigger: AGGAGCTCGGGGAGACAGCCCTTCATCTTGCCGTCAGGACCGCAGACCAGACATCTCTCCATCTGGTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp GGCAGAAGCTCTGTGGTCTGGGCGAGCGTTCCTTTTTaGTCGGGCTTGGCTTGTCATCCAGATCGTCATCGC +
Preference number: 6 (lower is better)
Translates to: GRSSVVWASVPF*SGLACHPDRHR
Trigger: GCGATGACGATCTGGATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACCACAGAGCTTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp CATTTGGAGACAGATCCCCGGTGTGTGACCTCTGTGTaGCCTCTGAGGGTGGCTGCACCTTGGCTGAGACAT +
Preference number: 6 (lower is better)
Translates to: HLETDPRCVTSV*PLRVAAPWLRH
Trigger: ATGTCTCAGCCAAGGTGCAGCCACCCTCAGAGGTCACACAGAGGTCACACACCGGGGATCTGTCTCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp TCTCGGGCCAAGGGCAGTCTTAGCAGAACTGGTGCTTaGTTGCTGAGACAGCCCCTCAAACTTGTTGGCCGT +
Preference number: 6 (lower is better)
Translates to: SRAKGSLSRTGA*LLRQPLKLVGR
Trigger: ACGGCCAACAAGTTTGAGGGGCTGTCTCAGCAAGCAAGCACCAGTTCTGCTAAGACTGCCCTTGGCCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp CACTGCCGTACTCCTTGTTGCCCTGGAGCTGATGCATaGTGTACCCACCTTGCCGGCTCTGAGAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HCRTPCCPGADA*CTHLAGSESLL
Trigger: AAGAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110115.9
ENSMUST00000177035.8
ENSMUST00000177083.8
CDS CCA 72 bp CTCTTCTTGGATAGGGTGGAGCTGCCACTAGAGGTCTaGGTGCCTAGAGGGAGTGTTGAAGGTGGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: LFLDRVELPLEV*VPRGSVEGGPV
Trigger: AACTGGCCCACCTTCAACACTCCCTCTAGGCACCCAGACCTCTAGTGGCAGCTCCACCCTATCCAAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GGGATTGGCCTCCAGGAGCCCTTGAAAGCGTATGACTaGCCTCCATTAAAGCCTGCTTTGGAAGGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: GIGLQEPLKAYD*PPLKPALEGKP
Trigger: GGGCTTGCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAAGGGCTCCTGGAGGCCAATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS CAA 72 bp CGGGCCAAGGGCAGTCTTAGCAGAACTGGTGCTTGCTaGCTGAGACAGCCCCTCAAACTTGTTGGCCGTCTT +
Preference number: 6 (lower is better)
Translates to: RAKGSLSRTGAC*LRQPLKLVGRL
Trigger: AAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGCAAGCAAGCACCAGTTCTGCTAAGACTGCCCTTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp CAGATGTCATTCCCAGGGAGCCGCTGTACATCCTCGATGATGGCTTaGGTAAGGTCCTCCAGGCTATTCTCCCCTGTGCTCTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: QMSFPGSRCTSSMMA*VRSSRLFSPVLCSP
Trigger: TGGTGAGCAGAGCACAGGGGAGAATAGCCTGGAGGACCTTACCAAAGCCATCATCGAGGATGTACAGCGGCTCCCTGGGAATGACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp GCCGTACTCCTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTTCTTTCGGATCAAGTTGCAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: AVLLVALELMHAVPT*PALRVFFRIKLQRG
Trigger: TCCTCTCTGCAACTTGATCCGAAAGAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110115.9
ENSMUST00000177035.8
ENSMUST00000177083.8
CDS CAA 90 bp ATCTGGTCCGGCATCCTAGTCCTTGGGATTGGCCTCCAGGAGCCCTaGAAAGCGTATGACTGGCCTCCATTAAAGCCTGCTTTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: IWSGILVLGIGLQEP*KAYDWPPLKPALEG
Trigger: GCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAAGGGCTCCTGGAGGCCAATCCCAAGGACTAGGATGCCGGACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS GCA 72 bp GTCAGGATCCCGTTCTTGACCGCACACTTCCGTCTCTaGCACACTTTCCGGATCCCATCACTCTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VRIPFLTAHFRL*HTFRIPSLFFS
Trigger: GCTGAAGAAGAGTGATGGGATCCGGAAAGTGTGGCAGAGACGGAAGTGTGCGGTCAAGAACGGGATCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TGGCAGGTGAGGAGGTTTAACTTAGCAGGCTGCCTGTaGGAAGTTGCGTGGGAGATGGTCAGGATCCCGTTC +
Preference number: 6 (lower is better)
Translates to: WQVRRFNLAGCL*EVAWEMVRIPF
Trigger: GAACGGGATCCTGACCATCTCCCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAACCTCCTCACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp GGTCTGGGCGAGCGTTCCTTTTTGATCGGGCTTGGCTaGTCATCCAGATCGTCATCGCTCTCATCCATCTCG +
Preference number: 6 (lower is better)
Translates to: GLGERSFLIGLG*SSRSSSLSSIS
Trigger: CGAGATGGATGAGAGCGATGACGATCTGGATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TGGCAGAAGCTCTGTGGTCTGGGCGAGCGTTCCTTTTaGATCGGGCTTGGCTTGTCATCCAGATCGTCATCG +
Preference number: 6 (lower is better)
Translates to: WQKLCGLGERSF*IGLGLSSRSSS
Trigger: CGATGACGATCTGGATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACCACAGAGCTTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TTGAAAGCGTATGACTGGCCTCCATTAAAGCCTGCTTaGGAAGGCAAGCCCTGTGGCCCACTCAGACCTGCC +
Preference number: 6 (lower is better)
Translates to: LKAYDWPPLKPA*EGKPCGPLRPA
Trigger: GGCAGGTCTGAGTGGGCCACAGGGCTTGCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS CAA 90 bp AAGCTCTGTGGTCTGGGCGAGCGTTCCTTTTTGATCGGGCTTGGCTaGTCATCCAGATCGTCATCGCTCTCATCCATCTCGTCCTGTCGA +
Preference number: 6 (lower is better)
Translates to: KLCGLGERSFLIGLG*SSRSSSLSSISSCR
Trigger: TCGACAGGACGAGATGGATGAGAGCGATGACGATCTGGATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACCACAGAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp GGACTTGATGGCCTCAAGCAATTCGTTCAGCTTTGCTaGGGAAGAGGCACAGGTCTTCCTGGAGAAGCGGTG +
Preference number: 6 (lower is better)
Translates to: GLDGLKQFVQLC*GRGTGLPGEAV
Trigger: CACCGCTTCTCCAGGAAGACCTGTGCCTCTTCCTCAGCAAAGCTGAACGAATTGCTTGAGGCCATCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp GTCTCAGGTGGGATGTTGGTTCTGTCGAGGGAGAGATaGTGGCTGGTCTCCGTCTTCCTTAGTGCCACTTTC +
Preference number: 6 (lower is better)
Translates to: VSGGMLVLSRER*WLVSVFLSATF
Trigger: GAAAGTGGCACTAAGGAAGACGGAGACCAGCCATCATCTCTCCCTCGACAGAACCAACATCCCACCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp CCTTGGGATTGGCCTCCAGGAGCCCTTGAAAGCGTATaGCTGGCCTCCATTAAAGCCTGCTTTGGAAGGCAA +
Preference number: 6 (lower is better)
Translates to: PWDWPPGALESV*LASIKACFGRQ
Trigger: TTGCCTTCCAAAGCAGGCTTTAATGGAGGCCAGTCATACGCTTTCAAGGGCTCCTGGAGGCCAATCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175963.2
CDS GCA 72 bp TACAAGGAAATCAACCAGATGGAGAGATGTCTGGTCTaGGGTCCTGACGGCAAGATGAAGGGCTGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: YKEINQMERCLV*GPDGKMKGCLP
Trigger: GGGGAGACAGCCCTTCATCTTGCCGTCAGGACCGCAGACCAGACATCTCTCCATCTGGTTGATTTCCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp AGGTTTAACTTAGCAGGCTGCCTGTTGGAAGTTGCGTaGGAGATGGTCAGGATCCCGTTCTTGACCGCACAC +
Preference number: 6 (lower is better)
Translates to: RFNLAGCLLEVA*EMVRIPFLTAH
Trigger: GTGTGCGGTCAAGAACGGGATCCTGACCATCTCCCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp CTGTGGTCTGGGCGAGCGTTCCTTTTTGATCGGGCTTaGCTTGTCATCCAGATCGTCATCGCTCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: LWSGRAFLFDRA*LVIQIVIALIH
Trigger: ATGGATGAGAGCGATGACGATCTGGATGACAAGCCAAGCCCGATCAAAAAGGAACGCTCGCCCAGACCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp CTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCACGTATTACACTGTTAGC +
Preference number: 6 (lower is better)
Translates to: LVALELMHAVPT*PALRVTYYTVS
Trigger: GCTAACAGTGTAATACGTGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
CDS CAA 72 bp TTGAAGATAATGGGCCCACATCATTACCCCAAGGAATaGCGCCTTTGTTTGGGGGCCCGTGAGGTAGTGGGC +
Preference number: 6 (lower is better)
Translates to: LKIMGPHHYPKE*RLCLGAREVVG
Trigger: GCCCACTACCTCACGGGCCCCCAAACAAAGGCGCAATTCCTTGGGGTAATGATGTGGGCCCATTATCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp CTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTTCTTTCGGATCAAGTTG +
Preference number: 6 (lower is better)
Translates to: LVALELMHAVPT*PALRVFFRIKL
Trigger: CAACTTGATCCGAAAGAAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110115.9
ENSMUST00000177035.8
ENSMUST00000177083.8
CDS CAA 90 bp GCCGTACTCCTTGTTGCCCTGGAGCTGATGCATGCTGTACCCACCTaGCCGGCTCTGAGAGTCTCTTCTAGATTCTTTCGGATCAAGTTG +
Preference number: 6 (lower is better)
Translates to: AVLLVALELMHAVPT*PALRVSSRFFRIKL
Trigger: CAACTTGATCCGAAAGAATCTAGAAGAGACTCTCAGAGCCGGCAAGGTGGGTACAGCATGCATCAGCTCCAGGGCAACAAGGAGTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000175793.8
CDS GCA 72 bp TTCACTTGGCAGGTGAGGAGGTTTAACTTAGCAGGCTaGCTGTTGGAAGTTGCGTGGGAGATGGTCAGGATC +
Preference number: 6 (lower is better)
Translates to: FTWQVRRFNLAG*LLEVAWEMVRI
Trigger: GATCCTGACCATCTCCCACGCAACTTCCAACAGGCAGCCTGCTAAGTTAAACCTCCTCACCTGCCAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp TGGCAGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATaGTTGCTTCTGGATGGCATCTCTGGACTGTACATT +
Preference number: 6 (lower is better)
Translates to: WQRGCEVVGVFR*LLLDGISGLYI
Trigger: AATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp AGATCTGGTCCGGCATCCGATTCCATAGTGAATCTCTaGAGGAAAAACTGGAGAGCCGGGAGGCTGAAGATC +
Preference number: 6 (lower is better)
Translates to: RSGPASDSIVNL*RKNWRAGRLKI
Trigger: GATCTTCAGCCTCCCGGCTCTCCAGTTTTTCCTCCAGAGATTCACTATGGAATCGGATGCCGGACCAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177374.8
CDS CCA 72 bp TATTCTCCCCTGTGCTCTGCTCACCACGGAAGGCCATaGTTAGGGCCTCTTCTTTGCTATTCGTCAGTACTG +
Preference number: 6 (lower is better)
Translates to: YSPLCSAHHGRP*LGPLLCYSSVL
Trigger: CAGTACTGACGAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTGAGCAGAGCACAGGGGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GCTGAGGAAGAGGCACAGGTCTTCCTGGAGAAGCGGTaGTCGACATACTTTGCAGTGATGTACTCTTTACGC +
Preference number: 6 (lower is better)
Translates to: AEEEAQVFLEKR*STYFAVMYSLR
Trigger: GCGTAAAGAGTACATCACTGCAAAGTATGTCGACCACCGCTTCTCCAGGAAGACCTGTGCCTCTTCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GTGGGATGTTGGTTCTGTCGAGGGAGAGATGATGGCTaGTCTCCGTCTTCCTTAGTGCCACTTTCTGAGGTA +
Preference number: 6 (lower is better)
Translates to: VGCWFCRGRDDG*SPSSLVPLSEV
Trigger: TACCTCAGAAAGTGGCACTAAGGAAGACGGAGACCAGCCATCATCTCTCCCTCGACAGAACCAACATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp TGTCTCTGGCAGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATGCTaGCTTCTGGATGGCATCTCTGGACTGTACATTTGGAGACAGATC +
Preference number: 6 (lower is better)
Translates to: CLWQRGCEVVGVFRC*LLDGISGLYIWRQI
Trigger: GATCTGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCTGCCAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp TGCTTGCTTGCTGAGACAGCCCCTCAAACTTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACATCATTACCTTTCCCGGCGTTCCGAG +
Preference number: 6 (lower is better)
Translates to: CLLAETAPQTCWPSY*KIMGPHHYLSRRSE
Trigger: CTCGGAACGCCGGGAAAGGTAATGATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGCAAGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000110114.10
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177035.8
CDS GCA 72 bp AGCGTGGGTGTGAGGTCGTTGGAGTCTTCAGATGCTTaGTTCTGGATGGCATCTCTGGACTGTACATTTGGA +
Preference number: 6 (lower is better)
Translates to: SVGVRSLESSDA*FWMASLDCTFG
Trigger: TCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACCCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp GCTGAGACAGCCCCTCAAACTTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACATCATTACCTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: AETAPQTCWPSY*KIMGPHHYLSR
Trigger: CCGGGAAAGGTAATGATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000110114.10
ENSMUST00000175799.8
ENSMUST00000176384.8
ENSMUST00000177035.8
CDS CAA 90 bp TGCTTGCTTGCTGAGACAGCCCCTCAAACTTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACATCATTACCCCAAGGAATTGCGCCTT +
Preference number: 6 (lower is better)
Translates to: CLLAETAPQTCWPSY*KIMGPHHYPKELRL
Trigger: AAGGCGCAATTCCTTGGGGTAATGATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGCAAGCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TGGTGCTTGCTTGCTGAGACAGCCCCTCAAACTTGTTaGCCGTCTTACTTGAAGATAATGGGCCCACATCAT +
Preference number: 6 (lower is better)
Translates to: WCLLAETAPQTC*PSYLKIMGPHH
Trigger: ATGATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGCAAGCAAGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp ACTGTGATGATTTCTGAAAAGTCTCAGGTGGGATGTTaGTTCTGTCGAGGGAGAGATGATGGCTGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: TVMISEKSQVGC*FCRGRDDGWSP
Trigger: CGGAGACCAGCCATCATCTCTCCCTCGACAGAACCAACATCCCACCTGAGACTTTTCAGAAATCATCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp GGTGTGAGGTCGTTGGAGTCTTCAGATGCTTGCTTCTaGATGGCATCTCTGGACTGTACATTTGGAGACAGA +
Preference number: 6 (lower is better)
Translates to: GVRSLESSDACF*MASLDCTFGDR
Trigger: TCTGTCTCCAAATGTACAGTCCAGAGATGCCATCCAGAAGCAAGCATCTGAAGACTCCAACGACCTCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp AGCAGCGTGGACAGTTCCTTTGTGAGTGTAGAAAACTaGACAAAAGCGGTGCCAAGGTCAGGGTTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: SSVDSSFVSVEN*TKAVPRSGLSL
Trigger: CAGAGACAACCCTGACCTTGGCACCGCTTTTGTCAAGTTTTCTACACTCACAAAGGAACTGTCCACGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176358.2
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp GCTGAGACAGCCCCTCAAACTTGTTGGCCGTCTTACTaGAAGATAATGGGCCCACATCATTACCCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: AETAPQTCWPSY*KIMGPHHYPKE
Trigger: TTCCTTGGGGTAATGATGTGGGCCCATTATCTTCAAGTAAGACGGCCAACAAGTTTGAGGGGCTGTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000176014.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp CCCCCTTCAAGTCTCCTTTTAACAAGGAATCCAAGGTaGAGATCACATTGTGGCTCAGACCCTGGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: PPSSLLLTRNPR*RSHCGSDPGAD
Trigger: ATCTGCTCCAGGGTCTGAGCCACAATGTGATCTTCACCTTGGATTCCTTGTTAAAAGGAGACTTGAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp ACAGGTCTTCCTGGAGAAGCGGTGGTCGACATACTTTaGAGTGATGTACTCTTTACGCACGGTCATATCACT +
Preference number: 6 (lower is better)
Translates to: TGLPGEAVVDIL*SDVLFTHGHIT
Trigger: AGTGATATGACCGTGCGTAAAGAGTACATCACTGCAAAGTATGTCGACCACCGCTTCTCCAGGAAGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp TTCCCCCTCAATAAATGTGAGTTCGTCGTCATTATCTaGCTGGCAGTCATAAATGGTCTTCACCCGCCTCAC +
Preference number: 6 (lower is better)
Translates to: FPLNKCEFVVII*LAVINGLHPPH
Trigger: GTGAGGCGGGTGAAGACCATTTATGACTGCCAGGCAGATAATGACGACGAACTCACATTTATTGAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TACAGGTCAAAATACCCAAGTTGGTTGAAAGCCACGTaGGTTCTGATGAGCCGCAGTCACAGCAGATGTCAT +
Preference number: 6 (lower is better)
Translates to: YRSKYPSWLKAT*VLMSRSHSRCH
Trigger: ATGACATCTGCTGTGACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCAACTTGGGTATTTTGACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TGTACTCTTTACGCACGGTCATATCACTTGAAGGGGTaGGCTTTGGTGAAGGGCTGGGTAAATTTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: CTLYARSYHLKG*ALVKGWVNLLP
Trigger: TGGAAGCAAATTTACCCAGCCCTTCACCAAAGCCCACCCCTTCAAGTGATATGACCGTGCGTAAAGAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp CGGAACATTCTATACAGGTCAAAATACCCAAGTTGGTaGAAAGCCACGTGGGTTCTGATGAGCCGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: RNILYRSKYPSW*KATWVLMSRSH
Trigger: GTGACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp GCCGTACATGCTGCAATAGTGCAGAACTGTATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACAGTTTTGTACAAGGAAATCAACCAG +
Preference number: 6 (lower is better)
Translates to: AVHAAIVQNCIPHRR*LIQVPTVLYKEINQ
Trigger: CTGGTTGATTTCCTTGTACAAAACTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAATACAGTTCTGCACTATTGCAGCATGTACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS TCA 72 bp TCCTGTCGAAGATTCCACTCATACTCTACGTGGACATaGGGGTTGAACTTTCCAGATTTAGCCTGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SCRRFHSYSTWT*GLNFPDLAWES
Trigger: GCTTTCCCAGGCTAAATCTGGAAAGTTCAACCCTCATGTCCACGTAGAGTATGAGTGGAATCTTCGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp ATCTCAGCGCCTGTTATCTCTGTTCGGATCATCCCGTaGTGTTTTGCGTGCTCTCTTTTCTCCTTCTCAATT +
Preference number: 6 (lower is better)
Translates to: ISAPVISVRIIP*CFACSLFSFSI
Trigger: AATTGAGAAGGAGAAAAGAGAGCACGCAAAACAGCACGGGATGATCCGAACAGAGATAACAGGCGCTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176358.2
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp GCTCACCACGGAAGGCCATGGTTAGGGCCTCTTCTTTaGTATTCGTCAGTACTGATATCCACGCTATATAAT +
Preference number: 6 (lower is better)
Translates to: AHHGRPWLGPLL*YSSVLISTLYN
Trigger: ATTATATAGCGTGGATATCAGTACTGACGAATAGCAAAGAAGAGGCCCTAACCATGGCCTTCCGTGGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp TTCCGGAACATTCTATACAGGTCAAAATACCCAAGTTaGTTGAAAGCCACGTGGGTTCTGATGAGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: FRNILYRSKYPS*LKATWVLMSRS
Trigger: ACTGCGGCTCATCAGAACCCACGTGGCTTTCAACCAACTTGGGTATTTTGACCTGTATAGAATGTTCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp GCTGCAATAGTGCAGAACTGTATTCCCCACAGACGTTaGCTTATCCAGGTTCCCACAGTTTTGTACAAGGAA +
Preference number: 6 (lower is better)
Translates to: AAIVQNCIPHRR*LIQVPTVLYKE
Trigger: TTCCTTGTACAAAACTGTGGGAACCTGGATAAGCAAACGTCTGTGGGGAATACAGTTCTGCACTATTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TTAGCCTGGGAAAGCAGATCTTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCCAAGGCAGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LAWESRSSHWVA*SLFAISKAVSP
Trigger: TGGAGAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCTTTCCCAGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TCTCCTTTTAACAAGGAATCCAAGGTGAAGATCACATaGTGGCTCAGACCCAGATTTTTCAGCAGCGTGGAC +
Preference number: 6 (lower is better)
Translates to: SPFNKESKVKIT*WLRPRFFSSVD
Trigger: GTCCACGCTGCTGAAAAATCTGGGTCTGAGCCACAATGTGATCTTCACCTTGGATTCCTTGTTAAAAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000176358.2
CDS CCA 72 bp TTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTaGGTAGCTTTGAGTCTCTTTGCTATATCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: FPDLAWESRSSH*VALSLFAISKA
Trigger: TGCCTTGGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp TTTCCAGATTTAGCCTGGGAAAGCAGATCTTCACACTGGGTAGCTTaGAGTCTCTTTGCTATATCCAAGGCAGTTTCTCCATTCTGGTTA +
Preference number: 6 (lower is better)
Translates to: FPDLAWESRSSHWVA*SLFAISKAVSPFWL
Trigger: TAACCAGAATGGAGAAACTGCCTTGGATATAGCAAAGAGACTCAAAGCTACCCAGTGTGAAGATCTGCTTTCCCAGGCTAAATCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CCA 72 bp AAACTTCGTCTCATAATCTTTCCAGGCTTTGTCAAATaGCTTCTTGAGATCTCCTTTGACCCCCTTCAAGTC +
Preference number: 6 (lower is better)
Translates to: KLRLIIFPGFVK*LLEISFDPLQV
Trigger: GACTTGAAGGGGGTCAAAGGAGATCTCAAGAAGCCATTTGACAAAGCCTGGAAAGATTATGAGACGAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176358.2
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 72 bp TATGTTCGATTATGTGATATCAGGTCAAAAGACTTCTaGTCCTCAGCATTCGGTTTCACTTGGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: YVRLCDIRSKDF*SSAFGFTWQVR
Trigger: CCTCACCTGCCAAGTGAAACCGAATGCTGAGGACAAGAAGTCTTTTGACCTGATATCACATAATCGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp CGGAAGTTCCTAATTTGTCTAGTTCCAAAGACTGAATaGGAGAAATATGAACCCCCATTTCCCTATGGATTC +
Preference number: 6 (lower is better)
Translates to: RKFLICLVPKTE*EKYEPPFPYGF
Trigger: GAATCCATAGGGAAATGGGGGTTCATATTTCTCGCATTCAGTCTTTGGAACTAGACAAATTAGGAACTTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS GCA 72 bp GCAACATATAAACCACCTACTTCTTTCGGATCAAGTTaGAGAGAGGATTTTATTAGATCTCGGAGTGCAGTT +
Preference number: 6 (lower is better)
Translates to: ATYKPPTSFGSS*REDFIRSRSAV
Trigger: AACTGCACTCCGAGATCTAATAAAATCCTCTCTGCAACTTGATCCGAAAGAAGTAGGTGGTTTATATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177371.8
ENSMUST00000177374.8
CDS CAA 90 bp GGTGAAGGGCTGGGTAAATTTGCTTCCATAATATCATTAAAACTATaGTTTCCTACATTCTTGGCCAGCAAGAGTTCGGAAGTTCCTAAT +
Preference number: 6 (lower is better)
Translates to: GEGLGKFASIISLKL*FPTFLASKSSEVPN
Trigger: ATTAGGAACTTCCGAACTCTTGCTGGCCAAGAATGTAGGAAACAATAGTTTTAATGATATTATGGAAGCAAATTTACCCAGCCCTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000023008.16
ENSMUST00000110114.10
ENSMUST00000110115.9
ENSMUST00000175793.8
ENSMUST00000175799.8
ENSMUST00000176014.8
ENSMUST00000176384.8
ENSMUST00000177035.8
ENSMUST00000177083.8
ENSMUST00000177371.8
ENSMUST00000177374.8