Pregenerated sensors for ASAH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031591Ensembl transcript IDs: ENSMUST00000034000.15, ENSMUST00000110417.8, ENSMUST00000143057.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCCTTGAGCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTaGACAACACATCTTCGGGTCTCAGTACGTCCTCAAGGCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: EALSLSLWKETRHAL*TTHLRVSVRPQGWP Trigger: TGGCCAGCCTTGAGGACGTACTGAGACCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGCTCAAGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 90 bp | CATCTTGGTGATACAGGCCCTGCAGAAGCACCTGGGCACAGTCTGTaGGTGAGGGGGAGCTGCTTTTGCATACCTGCAAACTGGGTCGAC | + |
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Preference number: 1 (lower is better) Translates to: HLGDTGPAEAPGHSL*VRGSCFCIPANWVD Trigger: GTCGACCCAGTTTGCAGGTATGCAAAAGCAGCTCCCCCTCACCCACAGACTGTGCCCAGGTGCTTCTGCAGGGCCTGTATCACCAAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 90 bp | ACTGTTTATTGCGCATCACGACACCGCAGACTGTCCAAAACTAAATaGATACAGTCTGCCACACTGTACAGAATGCTTCACTGTCAACTG | + |
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Preference number: 1 (lower is better) Translates to: TVYCASRHRRLSKTK*IQSATLYRMLHCQL Trigger: CAGTTGACAGTGAAGCATTCTGTACAGTGTGGCAGACTGTATCCATTTAGTTTTGGACAGTCTGCGGTGTCGTGATGCGCAATAAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 90 bp | CACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCTTaGTATCCTAGGTCAGTACAAAGCCTCATGAATTCCTATTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: HLSNSDCAYAPPCPP*YPRSVQSLMNSYSF Trigger: GAAGGAATAGGAATTCATGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGCTGACACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCCCTGGGCACAGTCTGTaGGTGAGGGGGAGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LLLTPVKFRLCLCTTLPTPGHSL*VRGSCF Trigger: AAAGCAGCTCCCCCTCACCCACAGACTGTGCCCAGG...GGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCACCTAAACCATCTTGGTaGTACAGGCCCTGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VLMHHLAHLGILGQYKASPKPSW*YRPCRS Trigger: GCTTCTGCAGGGCCTGTATCACCAAGATGGTTTAGG...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGCTGACACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCAAAGACAAGAGGCCTTaGGCCTTAGCCTATGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLTPVKFRLCLCTTLPTKDKRP*ALAYGR Trigger: CCTTCCATAGGCTAAGGCTCAAGGCCTCTTGTCTTT...GGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCATCCGCAGTGGCAAAGTaGAATGAACTGGCAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VLMHHLAHLGILGQYKASSAVAK*NELAIS Trigger: AGAAATTGCCAGTTCATTTCACTTTGCCACTGCGGA...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCAAGTGGCAAAGTGAAATaGACTGGCAATTTCTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLMHHLAHLGILGQYKASSGKVK*TGNFYV Trigger: CACATAGAAATTGCCAGTTCATTTCACTTTGCCACT...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCAATATGTTTAGTAACCTaGTTGCATAACCCTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: VLMHHLAHLGILGQYKASICLVT*LHNPCC Trigger: ACAACAAGGGTTATGCAAGCAGGTTACTAAACATAT...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | GATACAGGCCCTGCAGAAGCACCTGGGCACAGTCTGTaGGTGAGGGGGAGCTGCTTTTGCATACCTGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DTGPAEAPGHSL*VRGSCFCIPAN Trigger: GTTTGCAGGTATGCAAAAGCAGCTCCCCCTCACCCACAGACTGTGCCCAGGTGCTTCTGCAGGGCCTGTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR GCA 72 bp | AGCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTaGACAACACATCTTCGGGTCTCAGTACGTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLWKETRHAL*TTHLRVSVRPQ Trigger: TTGAGGACGTACTGAGACCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR CAA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCACCAAGCATAGCGACATaGCACTGCTGTCACCACCAG | + |
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Preference number: 3 (lower is better) Translates to: VLMHHLAHLGILGQYKASPSIAT*HCCHHQ Trigger: CTGGTGGTGACAGCAGTGCAATGTCGCTATGCTTGG...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR CAA 90 bp | GTATCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCAAGGTGAATGGCAGGTaGGTTCTAAGAGAGAACCAG | + |
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Preference number: 3 (lower is better) Translates to: VSQAGPELLILLLTPVKFKVNGR*VLRENQ Trigger: CTGGTTCTCTCTTAGAACCAACCTGCCATTCACCTT...GAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | CGACATTGCACTGCTGTCACCACCAGCAAAGGTGAATaGCAGGTTGGTTCTAAGAGAGAACCAGGAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RHCTAVTTSKGE*QVGSKREPGKG Trigger: TCCTTTTCCTGGTTCTCTCTTAGAACCAACCTGCCATTCACCTTTGCTGGTGGTGACAGCAGTGCAATGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | TGCGCATCACGACACCGCAGACTGTCCAAAACTAAATaGATACAGTCTGCCACACTGTACAGAATGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: CASRHRRLSKTK*IQSATLYRMLH Trigger: GTGAAGCATTCTGTACAGTGTGGCAGACTGTATCCATTTAGTTTTGGACAGTCTGCGGTGTCGTGATGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | TGGGTTCCATGGAGGTCACAGTTACCCTTTCCGCAGTaGCAAAGTGAAATGAACTGGCAATTTCTATGTGGT | + |
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Preference number: 3 (lower is better) Translates to: WVPWRSQLPFPQ*QSEMNWQFLCG Trigger: ACCACATAGAAATTGCCAGTTCATTTCACTTTGCCACTGCGGAAAGGGTAACTGTGACCTCCATGGAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR TCA 72 bp | ATGGAGGTCACAGTTACCCTTTCCGCAGTGGCAAAGTaGAATGAACTGGCAATTTCTATGTGGTGTCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: MEVTVTLSAVAK*NELAISMWCPL Trigger: TAAGGGACACCACATAGAAATTGCCAGTTCATTTCACTTTGCCACTGCGGAAAGGGTAACTGTGACCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR TCA 72 bp | GCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCATaGATTCCTATTCCTTCCCTAAACCATCTTGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: AHLGILGQYKAS*IPIPSLNHLGD Trigger: ATCACCAAGATGGTTTAGGGAAGGAATAGGAATTCATGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | AATTCAGATTGTGCTTATGCACCACCTTGCCCACCTTaGTATCCTAGGTCAGTACAAAGCCTCATGAATTCC | + |
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Preference number: 3 (lower is better) Translates to: NSDCAYAPPCPP*YPRSVQSLMNS Trigger: GGAATTCATGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCACAATCTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGCTGACACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCTGTTTAGTAACCTGCTaGCATAACCCTTGTTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLLTPVKFRLCLCTTLPTCLVTC*HNPCCL Trigger: TAAACAACAAGGGTTATGCAAGCAGGTTACTAAACA...GGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR TCA 72 bp | GGTCACAGTTACCCTTTCCGCAGTGGCAAAGTGAAATaGACTGGCAATTTCTATGTGGTGTCCCTTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GHSYPFRSGKVK*TGNFYVVSLKE Trigger: TTCTTTAAGGGACACCACATAGAAATTGCCAGTTCATTTCACTTTGCCACTGCGGAAAGGGTAACTGTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR TCA 72 bp | AGAAAATGTAACTTTTACATTAATCACACAGGGCGCTaGCTCAAACACCATCAGAGAACTTTGATGGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: RKCNFYINHTGR*LKHHQRTLMGS Trigger: GGAACCCATCAAAGTTCTCTGATGGTGTTTGAGTCAGCGCCCTGTGTGATTAATGTAAAAGTTACATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| 3UTR CCA 72 bp | TTCCACTTGGCACAAATGTATTCACTAAACTCGTTATaGAATTCACTAAAATCCTCAACGCTGGTGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: FHLAQMYSLNSL*NSLKSSTLVPF Trigger: AAAAGGCACCAGCGTTGAGGATTTTAGTGAATTCCATAACGAGTTTAGTGAATACATTTGTGCCAAGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| 3UTR TCA 72 bp | AGTCCAAATTCACTGTTAAGGGCTTTAATTCTTCTGTaGCAACCCAAGTGTTATTATTTATATTCCACCCAA | + |
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Preference number: 3 (lower is better) Translates to: SPNSLLRALILL*QPKCYYLYSTQ Trigger: TTGGGTGGAATATAAATAATAACACTTGGGTTGTCACAGAAGAATTAAAGCCCTTAACAGTGAATTTGGACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR TCA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGCGGCTAGGACCCAGGTaGGAAGACTTTGGCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGRLGPR*EDFGPA Trigger: TGCGGGGCCAAAGTCTTCTCACCTGGGTCCTAGCCG...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR TCA 90 bp | ATCCCAGTAACATCTGCAATTCCCCTCATTTCCTCTCCAAAAGGGTCAGGAAGGGTGCCTGGGCGCAGGTaGCTGCCGCGGCTAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: IPVTSAIPLISSPKGSGRVPGRR*LPRLGP Trigger: GGGTCCTAGCCGCGGCAGTCACCTGCGCCCAGGCAC...CCTTCCTGACCCTTTTGGAGAGGAAATGAGGGGAATTGCAGATGTTACTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCAGACGGCGGCACATCCTGTaGCTGGGCGCAGGTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: SQAGPELLILLLTPVKFRRRHIL*LGAGDC Trigger: GCAGTCACCTGCGCCCAGGCACAGGATGTGCCGCCG...TCTGAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR TCA 90 bp | CCCAGTAACATCTGCAATTCCCCTCATTTCCTCTCCAAAAGGGTCAGGAAGGCTCGGCTAGGACCCAGGTaGGAAGACTTTGGCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PSNICNSPHFLSKRVRKARLGPR*EDFGPA Trigger: TGCGGGGCCAAAGTCTTCTCACCTGGGTCCTAGCCG...AGCCTTCCTGACCCTTTTGGAGAGGAAATGAGGGGAATTGCAGATGTTACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR GCA 90 bp | TGCCAATCATACCAGGCAGCTTTTGATCCACCATCTTCATTAGTTTTCCACTTGCGGCGGCACATCCTGTaGCTGGGCGCAGGTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: CQSYQAAFDPPSSLVFHLRRHIL*LGAGDC Trigger: GCAGTCACCTGCGCCCAGGCACAGGATGTGCCGCCG...CAAGTGGAAAACTAATGAAGATGGTGGATCAAAAGCTGCCTGGTATGATTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR CCA 90 bp | ACTGAACAGTCCTGGTTTGAATCCTGTCAACATGCCCACATATCCAACAAAACTGGCACATCCTGTGCCTaGGCGCAGGTGACTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TEQSWFESCQHAHISNKTGTSCA*AQVTAA Trigger: CGCGGCAGTCACCTGCGCCCAGGCACAGGATGTGCC...AGTTTTGTTGGATATGTGGGCATGTTGACAGGATTCAAACCAGGACTGTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR TCA 90 bp | TCACTGTCAACTGTGAAGGTTAGAAAGATGAACAAGTTCTGTTTGCAGTTTTCAGTGCCTGGGCGCAGGTaGCTGCCGCGGCTAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SLSTVKVRKMNKFCLQFSVPGRR*LPRLGP Trigger: GGGTCCTAGCCGCGGCAGTCACCTGCGCCCAGGCAC...TGAAAACTGCAAACAGAACTTGTTCATCTTTCTAACCTTCACAGTTGACAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR GCA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGGATACGTTGATTTTCTaGAATCTTCTGTCCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGDTLIF*NLLSTA Trigger: CGCCGTGGACAGAAGATTGCAGAAAATCAACGTATC...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR GCA 90 bp | CTTCTGCTGACACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCAAGGGTCAGGAAGGCTaGCAATCATACCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLLTPVKFRLCLCTTLPTKGQEG*QSYQAA Trigger: AGCTGCCTGGTATGATTGGCAGCCTTCCTGACCCTT...GGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | AAAATAAGTATCAAATGTCTATCTGAGGTACTCCAGCCAAGCATAGCGACATTGGGCACATCCTGTGCCTaGGCGCAGGTGACTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: KISIKCLSEVLQPSIATLGTSCA*AQVTAA Trigger: CGCGGCAGTCACCTGCGCCCAGGCACAGGATGTGCC...CAATGTCGCTATGCTTGGCTGGAGTACCTCAGATAGACATTTGATACTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR TCA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGCTCCCATGTAGTAAATaGCCTTTCTCATCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGLPCSK*PFSSSV Trigger: AACTGAAGATGAGAAAGGTCATTTACTACATGGGAG...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR GCA 90 bp | GTATCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCTCAAGATTTATGGTGTaGCACGGAACTGGTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VSQAGPELLILLLTPVKFSRFMV*HGTGPL Trigger: TAGAGGACCAGTTCCGTGGCACACCATAAATCTTGA...GAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGCTTCTTCATAACTTGTaGTGTTTTCCAGAACTGATC | + |
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Preference number: 4 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGLLHNL*CFPELI Trigger: GATCAGTTCTGGAAAACACCACAAGTTATGAAGAAG...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR GCA 90 bp | GTATCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCAATCCCAGTAACATCTaGAATTCCCCTCATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSQAGPELLILLLTPVKFNPSNI*NSPHFL Trigger: GAGGAAATGAGGGGAATTGCAGATGTTACTGGGATT...GAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | GTATCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCGTAAATCAAGATTTATaGTGTGCCACGGAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: VSQAGPELLILLLTPVKFVNQDL*CATELV Trigger: GACCAGTTCCGTGGCACACCATAAATCTTGATTTAC...GAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR GCA 90 bp | CCCAGTAACATCTGCAATTCCCCTCATTTCCTCTCCAAAAGGGTCAGGAAGGCTGATACGTTGATTTTCTaGAATCTTCTGTCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: PSNICNSPHFLSKRVRKADTLIF*NLLSTT Trigger: GGTGGTGGACAGAAGATTGCAGAAAATCAACGTATC...AGCCTTCCTGACCCTTTTGGAGAGGAAATGAGGGGAATTGCAGATGTTACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| 3UTR CAA 72 bp | CTTCTGATTCTTCTGCTGACACCTGTCAAATTCAGATaGTGCTTATGCACCACCTTGCCCACCTTGGTATCC | + |
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Preference number: 4 (lower is better) Translates to: LLILLLTPVKFR*CLCTTLPTLVS Trigger: GGATACCAAGGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAGAATCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | GTCTGCCACACTGTACAGAATGCTTCACTGTCAACTGTGAAGGTTAGAAAGATGATAAACCCTACCCACTaGGCATCTTTCCTTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: VCHTVQNASLSTVKVRKMINPTH*ASFLPN Trigger: GTTCGGAAGGAAAGATGCCCAGTGGGTAGGGTTTAT...CATCTTTCTAACCTTCACAGTTGACAGTGAAGCATTCTGTACAGTGTGGCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | TCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCAGAAGAGATTCTTCTGTGTaGTGTGATTTAGACACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQAGPELLILLLTPVKFRRDSSV*CDLDTS Trigger: AGAAGTGTCTAAATCACACCACACAGAAGAATCTCT...TCTGAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR TCA 90 bp | GTCTGCCACACTGTACAGAATGCTTCACTGTCAACTGTGAAGGTTAGAAAGATGAGAAGGAGGATACGTTaGTTTTCTGCAATCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VCHTVQNASLSTVKVRKMRRRIR*FSAIFC Trigger: ACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCT...CATCTTTCTAACCTTCACAGTTGACAGTGAAGCATTCTGTACAGTGTGGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR TCA 90 bp | GTCTGCCACACTGTACAGAATGCTTCACTGTCAACTGTGAAGGTTAGAAAGATGATACAGTCAGCTTGTTaGGGACAGGTTTTGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: VCHTVQNASLSTVKVRKMIQSAC*GQVLLI Trigger: TATCAACAAAACCTGTCCTCAACAAGCTGACTGTAT...CATCTTTCTAACCTTCACAGTTGACAGTGAAGCATTCTGTACAGTGTGGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CCA 90 bp | TCACTGTCAACTGTGAAGGTTAGAAAGATGAACAAGTTCTGTTTGCAGTTTTCACAGGATAAAATATACTaGCGCCATTATCTTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLSTVKVRKMNKFCLQFSQDKIY*RHYLGL Trigger: AAGACCAAGATAATGGCGCCAGTATATTTTATCCTG...TGAAAACTGCAAACAGAACTTGTTCATCTTTCTAACCTTCACAGTTGACAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS GCA 90 bp | ATCTTCCCAGCTGCAAGCGCCGCTCCGAGGGACTCTAGCAGCAGCTaGAGCAGGGACCACCTCCACCAGCAGCAGGCCGCACCCCAACGC | + |
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Preference number: 5 (lower is better) Translates to: IFPAASAAPRDSSSS*SRDHLHQQQAAPQR Trigger: GCGTTGGGGTGCGGCCTGCTGCTGGTGGAGGTGGTCCCTGCTGCAGCTGCTGCTAGAGTCCCTCGGAGCGGCGCTTGCAGCTGGGAAGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143057.2 |
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| CDS CCA 90 bp | GTTGATTTTCTGCAATCTTCTGTCCACGGCGGCACATCCTGTGCCTaGGCGCAGGTGACTGCCGCGGCTAGGACCCAGGTGAGAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: VDFLQSSVHGGTSCA*AQVTAAARTQVRRL Trigger: AAGTCTTCTCACCTGGGTCCTAGCCGCGGCAGTCACCTGCGCCCAGGCACAGGATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS GCA 90 bp | CTGGTCCTCTATAGGTTGGTCCAGAAGGAGGATACGTTGATTTTCTaGAATCTTCTGTCCACGGCGGCACATCCTGTGCCTGGGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVLYRLVQKEDTLIF*NLLSTAAHPVPGRR Trigger: CCTGCGCCCAGGCACAGGATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS TCA 90 bp | CCACGGAACTGGTCCTCTATAGGTTGGTCCAGAAGGAGGATACGTTaGTTTTCTGCAATCTTCTGTCCACGGCGGCACATCCTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PRNWSSIGWSRRRIR*FSAIFCPRRHILCL Trigger: CAGGCACAGGATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCAGTTCCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGCCTGTCATAATTGGTTaGTACCACATACCATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGPVIIG*YHIPSA Trigger: GGCAGATGGTATGTGGTACAAACCAATTATGACAGG...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | TCCCAGGCTGGCCCCGAACTTCTGATTCTTCTGCTGACACCTGTCAAATTCAGACTGAACAGTCCTGGTTaGAATCCTGTCAACATGCCC | + |
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Preference number: 5 (lower is better) Translates to: SQAGPELLILLLTPVKFRLNSPG*NPVNMP Trigger: GGGCATGTTGACAGGATTCAAACCAGGACTGTTCAG...TCTGAATTTGACAGGTGTCAGCAGAAGAATCAGAAGTTCGGGGCCAGCCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | GTGCTTATGCACCACCTTGCCCACCTTGGTATCCTAGGTCAGTACAAAGCCTCAACTGGCGCCATTATCTaGGTCTTGGTCAGTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VLMHHLAHLGILGQYKASTGAII*VLVSVF Trigger: GAACACACTGACCAAGACCAAGATAATGGCGCCAGT...TGAGGCTTTGTACTGACCTAGGATACCAAGGTGGGCAAGGTGGTGCATAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | GCCTTAGCCTATGGAAGGAGACCAGGCACGCTCTCTGCACAACACATCTTCGGGGTGAATACAGTCAGCTaGTTGAGGACAGGTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: ALAYGRRPGTLSAQHIFGVNTVS*LRTGFV Trigger: AACAAAACCTGTCCTCAACAAGCTGACTGTATTCAC...CCCGAAGATGTGTTGTGCAGAGAGCGTGCCTGGTCTCCTTCCATAGGCTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CCA 90 bp | CACACAACCCTCTCCAGACTTCTTGCCTCCCAGGATAAAATATACTaGCGCCATTATCTTGGTCTTGGTCAGTGTGTTCTTGGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTTLSRLLASQDKIY*RHYLGLGQCVLGFF Trigger: GAAGAAGCCAAGAACACACTGACCAAGACCAAGATAATGGCGCCAGTATATTTTATCCTGGGAGGCAAGAAGTCTGGAGAGGGTTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | CTTCTGCTGACACCTGTCAAATTCAGATTGTGCTTATGCACCACCTTGCCCACCCAGAAGGAGGATACGTaGATTTTCTGCAATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLLTPVKFRLCLCTTLPTQKEDT*IFCNLL Trigger: CAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTG...GGTGGGCAAGGTGGTGCATAAGCACAATCTGAATTTGACAGGTGTCAGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS TCA 90 bp | CAGTGTGTTCTTGGCTTCTTCATAACTTGTGGTGTTTTCCAGAACTaGTCGAGTGATAAACCCTACCCACTGGGCATCTTTCCTTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: QCVLGFFITCGVFQN*SSDKPYPLGIFPSE Trigger: TTCGGAAGGAAAGATGCCCAGTGGGTAGGGTTTATCACTCGATCAGTTCTGGAAAACACCACAAGTTATGAAGAAGCCAAGAACACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | GTCTGCCACACTGTACAGAATGCTTCACTGTCAACTGTGAAGGTTAGAAAGATGAATACAGTCAGCTTGTaGAGGACAGGTTTTGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: VCHTVQNASLSTVKVRKMNTVSL*RTGFVD Trigger: ATCAACAAAACCTGTCCTCAACAAGCTGACTGTATT...CATCTTTCTAACCTTCACAGTTGACAGTGAAGCATTCTGTACAGTGTGGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | TCACTGTCAACTGTGAAGGTTAGAAAGATGAACAAGTTCTGTTTGCAGTTTTCAGCCATTATCTTGGTCTaGGTCAGTGTGTTCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SLSTVKVRKMNKFCLQFSAIILV*VSVFLA Trigger: AGCCAAGAACACACTGACCAAGACCAAGATAATGGC...TGAAAACTGCAAACAGAACTTGTTCATCTTTCTAACCTTCACAGTTGACAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS-3UTR CAA 90 bp | CCACCATTTATACTGAAACGTTCATTTAGTGAAAGACTGAACAGTCCTGGTTTGCAGAAGGAGGATACGTaGATTTTCTGCAATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PPFILKRSFSERLNSPGLQKEDT*IFCNLL Trigger: CAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTG...CAAACCAGGACTGTTCAGTCTTTCACTAAATGAACGTTTCAGTATAAATGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS-3UTR CAA 90 bp | AAAATAAGTATCAAATGTCTATCTGAGGTACTCCAGCCAAGCATAGCGACATTGAAGGTGACTTTCAAATaGACCTTTGGTAACATCCAT | + |
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Preference number: 5 (lower is better) Translates to: KISIKCLSEVLQPSIATLKVTFK*TFGNIH Trigger: ATGGATGTTACCAAAGGTCAATTTGAAAGTCACCTT...CAATGTCGCTATGCTTGGCTGGAGTACCTCAGATAGACATTTGATACTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS GCA 72 bp | GCTGCAAGCGCCGCTCCGAGGGACTCTAGCAGCAGCTaGAGCAGGGACCACCTCCACCAGCAGCAGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AASAAPRDSSSS*SRDHLHQQQAA Trigger: TGCGGCCTGCTGCTGGTGGAGGTGGTCCCTGCTGCAGCTGCTGCTAGAGTCCCTCGGAGCGGCGCTTGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143057.2 |
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| CDS CCA 72 bp | AATCTTCTGTCCACCACCGGCGGCACATCCTGTGCCTaGGCGCAGGTGACTGCCGCGGCTAGGACCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: NLLSTTGGTSCA*AQVTAAARTQV Trigger: CACCTGGGTCCTAGCCGCGGCAGTCACCTGCGCCCAGGCACAGGATGTGCCGCCGGTGGTGGACAGAAGATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS CCA 72 bp | GTGACTGCCGCGGCTAGGACCCAGGTGAGAAGACTTTaGCCCCGCATCTTCCCAGCTGCAAGCGCCGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VTAAARTQVRRL*PRIFPAASAAP Trigger: CGGAGCGGCGCTTGCAGCTGGGAAGATGCGGGGCCAAAGTCTTCTCACCTGGGTCCTAGCCGCGGCAGTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143057.2 |
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| CDS CAA 90 bp | GCCACGGAACTGGTCCTCTATAGGTTGGTCCAGAAGGAGGATACGTaGATTTTCTGCAATCTTCTGTCCACGGCGGCACATCCTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ATELVLYRLVQKEDT*IFCNLLSTAAHPVP Trigger: AGGCACAGGATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCAGTTCCGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS TCA 72 bp | TGGTCCTCTATAGGTTGGTCCAGAAGGAGGATACGTTaGTTTTCTGCAATCTTCTGTCCACGGCGGCACATC | + |
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Preference number: 6 (lower is better) Translates to: WSSIGWSRRRIR*FSAIFCPRRHI Trigger: GATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS GCA 72 bp | TATAGGTTGGTCCAGAAGGAGGATACGTTGATTTTCTaGAATCTTCTGTCCACGGCGGCACATCCTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: YRLVQKEDTLIF*NLLSTAAHPVP Trigger: AGGCACAGGATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS GCA 72 bp | TATAGGTTGGTCCAGAAGGAGGATACGTTGATTTTCTaGAATCTTCTGTCCACCACCGGCGGCACATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: YRLVQKEDTLIF*NLLSTTGGTSC Trigger: ACAGGATGTGCCGCCGGTGGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110417.8 |
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| CDS CAA 72 bp | CTGGTCCTCTATAGGTTGGTCCAGAAGGAGGATACGTaGATTTTCTGCAATCTTCTGTCCACGGCGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LVLYRLVQKEDT*IFCNLLSTAAH Trigger: ATGTGCCGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS TCA 72 bp | GTTCATAGACATCCAAAGACTCTTTTCTTTCCCGTGTaGTCACACAACCCTCTCCAGACTTCTTGCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VHRHPKTLFFPV*SHNPLQTSCLP Trigger: TGGGAGGCAAGAAGTCTGGAGAGGGTTGTGTGATCACACGGGAAAGAAAAGAGTCTTTGGATGTCTATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CCA 72 bp | CTGGCGCCATTATCTTGGTCTTGGTCAGTGTGTTCTTaGCTTCTTCATAACTTGTGGTGTTTTCCAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LAPLSWSWSVCS*LLHNLWCFPEL Trigger: CAGTTCTGGAAAACACCACAAGTTATGAAGAAGCCAAGAACACACTGACCAAGACCAAGATAATGGCGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CCA 72 bp | CTCTCCAGACTTCTTGCCTCCCAGGATAAAATATACTaGCGCCATTATCTTGGTCTTGGTCAGTGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSRLLASQDKIY*RHYLGLGQCVL Trigger: AAGAACACACTGACCAAGACCAAGATAATGGCGCCAGTATATTTTATCCTGGGAGGCAAGAAGTCTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CAA 90 bp | CCAGCCTATACAAGGGTCTGGGCAATCTCGAAGGTGACTTTCAAATaGACCTTTGGTAACATCCATCAAGGTTGTGAATACAGTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: PAYTRVWAISKVTFK*TFGNIHQGCEYSQL Trigger: AAGCTGACTGTATTCACAACCTTGATGGATGTTACCAAAGGTCAATTTGAAAGTCACCTTCGAGATTGCCCAGACCCTTGTATAGGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CCA 72 bp | TTTTCCAGAACTGATCGAGTGATAAACCCTACCCACTaGGCATCTTTCCTTCCGAACATCCATTCTAGGATA | + |
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Preference number: 6 (lower is better) Translates to: FSRTDRVINPTH*ASFLPNIHSRI Trigger: TATCCTAGAATGGATGTTCGGAAGGAAAGATGCCCAGTGGGTAGGGTTTATCACTCGATCAGTTCTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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| CDS CAA 72 bp | ACAAGGGTCTGGGCAATCTCGAAGGTGACTTTCAAATaGACCTTTGGTAACATCCATCAAGGTTGTGAATAC | + |
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Preference number: 6 (lower is better) Translates to: TRVWAISKVTFK*TFGNIHQGCEY Trigger: GTATTCACAACCTTGATGGATGTTACCAAAGGTCAATTTGAAAGTCACCTTCGAGATTGCCCAGACCCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034000.15 |
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