Pregenerated sensors for AS3MT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003559Ensembl transcript IDs: ENSMUST00000003655.9, ENSMUST00000236063.2, ENSMUST00000236465.2, ENSMUST00000237219.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGGTGGGCTCCGCGCTGGCTGTAGATCTAGCAGTTTTTCCTCTTaGCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: PGGLRAGCRSSSFSS*HSSLPCLQVHVWAS Trigger: TGAAGCCCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCTAGATCTACAGCCAGCGCGGAGCCCACCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR CCA 90 bp | ATGATATCGGCAGTGACCAAACGTGGAGGGCAGAACCCAATCTTTTaGGCAATGATGGCAAGATCCTTCCAGTACAGAGCGCCTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: MISAVTKRGGQNPIF*AMMARSFQYRAPPR Trigger: CCTGGGAGGCGCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCCGATATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR CCA 90 bp | ATGTCCCTTGATTCCTCCATTGTAAACAACTCGGCATCTTTCGGCTaGCTCTGTCTTAGGGAGTTTGAAGAGGCGAAATGTGGCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: MSLDSSIVNNSASFG*LCLREFEEAKCGRH Trigger: GTGTCTGCCACATTTCGCCTCTTCAAACTCCCTAAGACAGAGCCAGCCGAAAGATGCCGAGTTGTTTACAATGGAGGAATCAAGGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR CCA 90 bp | GAGCTCCTTGTTTTCAACAGTAATGATATCGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTTTTGGGCAATGATGGCAAGATCCTT | + |
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Preference number: 1 (lower is better) Translates to: ELLVFNSNDIGSDQT*RAEPNLLGNDGKIL Trigger: AAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCCGATATCATTACTGTTGAAAACAAGGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: PPVPSGACLGFILSESSAGSDQT*RAEPNL Trigger: AAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCC...TGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGGCGTCAACAGGTGTaGAGAGAAAATCCGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PPVPSGACLGFILSESSARRQQV*RENPEQ Trigger: TTGCTCCGGATTTTCTCTTCACACCTGTTGACGCCT...TGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR CAA 90 bp | CCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTaGTCAGAGTCCTCTGCAAGCTTGAATGGATCTCTGATTAGAACC | + |
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Preference number: 2 (lower is better) Translates to: PQQPPVPSGACLGFI*SESSASLNGSLIRT Trigger: GGTTCTAATCAGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTTGTTGGTCTAGCTTGTGGTaGCTTTGCCACCTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: SCHSSLPCLQVHVWASSCWSSLW*LCHLHI Trigger: TATGTGAAGGTGGCAAAGCCACCACAAGCTAGACCA...ACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR CAA 90 bp | AATGATATCGGCAGTGACCAAACGTGGAGGGCAGAACCCAATCTTTaGGGCAATGATGGCAAGATCCTTCCAGTACAGAGCGCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NDIGSDQTWRAEPNL*GNDGKILPVQSASQ Trigger: CTGGGAGGCGCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCCGATATCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGATGCCTTTGGCCCTTTaGGTAAACCTTGGGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRMPLAL*VNLGLP Trigger: TGGAAGCCCAAGGTTTACTCAAAGGGCCAAAGGCAT...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR CAA 90 bp | GTGGCAGACACAAAGCGACAGTCACCAAGAACCCCTTCGAGCTCCTaGTTTTCAACAGTAATGATATCGGCAGTGACCAAACGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VADTKRQSPRTPSSS*FSTVMISAVTKRGG Trigger: CCCTCCACGTTTGGTCACTGCCGATATCATTACTGTTGAAAACAAGGAGCTCGAAGGGGTTCTTGGTGACTGTCGCTTTGTGTCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAGCAGTTTTTCCTCTTGCCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCAGCTTGTGGTGGCTTTaGCACCTTCACATAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSSFSSCHSSLPCLQVHVSLWWL*HLHIIC Trigger: ACAGATTATGTGAAGGTGGCAAAGCCACCACAAGCT...GACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACCAGTGGTCTAGCTTGTaGTGGCTTTGCCACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHQWSSL*WLCHLH Trigger: GTGAAGGTGGCAAAGCCACCACAAGCTAGACCACTG...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCACCTTTTCATGTCCCTTaGTTCCTCCATTGTAAACAA | + |
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Preference number: 2 (lower is better) Translates to: PPVPSGACLGFILSESSAPFHVP*FLHCKQ Trigger: TTGTTTACAATGGAGGAATCAAGGGACATGAAAAGG...TGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGGTGGCACCAGAACTCTaGGATAGAGAAATAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRVAPEL*DREIEK Trigger: CTTTTCTATTTCTCTATCTCAGAGTTCTGGTGCCAC...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAATCCGGAGCAAAACGTGAGTTCTTCAGGACAGCTGCCGTCTCCTCATCCAGCTTGTGGTGGCTTTaGCACCTTCACATAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: RKSGAKREFFRTAAVSSSSLWWL*HLHIIC Trigger: ACAGATTATGTGAAGGTGGCAAAGCCACCACAAGCT...GGATGAGGAGACGGCAGCTGTCCTGAAGAACTCACGTTTTGCTCCGGATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACTGGTCTAGCTTGTGGTaGCTTTGCCACCTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHWSSLW*LCHLHI Trigger: TATGTGAAGGTGGCAAAGCCACCACAAGCTAGACCA...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTAGCTTGTGGTGGCTTTaGCACCTTCACATAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSSLWWL*HLHIIC Trigger: ACAGATTATGTGAAGGTGGCAAAGCCACCACAAGCT...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR CAA 90 bp | TCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGCTaGAATGGATCTCTGATTAGAACCTTTGTCTCTAACTCAGAACGG | + |
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Preference number: 2 (lower is better) Translates to: SGACLGFILSESSAS*NGSLIRTFVSNSER Trigger: CCGTTCTGAGTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTGTGGCACCAGAACTCTaGGATAGAGAAATAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSVAPEL*DREIEK Trigger: CTTTTCTATTTCTCTATCTCAGAGTTCTGGTGCCAC...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGAATGGATCTCTGATTAGAACCTTTGTCTCTAACTCAGAACGGCCCTGGCGACTTGATGTCTTCTaGCACTTCAAGGCTGGCATA | + |
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Preference number: 2 (lower is better) Translates to: SLNGSLIRTFVSNSERPWRLDVF*HFKAGI Trigger: TATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCG...CCAGGGCCGTTCTGAGTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGAATGGATCTCTGATTAGAACCTTTGTCTCTAACTCAGAACGGCCCTGGGTGGCACCAGAACTCTaGGATAGAGAAATAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLNGSLIRTFVSNSERPWVAPEL*DREIEK Trigger: CTTTTCTATTTCTCTATCTCAGAGTTCTGGTGCCAC...CCAGGGCCGTTCTGAGTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAACAGTGGTCTAGCTTGTaGTGGCTTTGCCACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: MVSINLVSTVLPGNHREEQWSSL*WLCHLH Trigger: GTGAAGGTGGCAAAGCCACCACAAGCTAGACCACTG...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGATCCAAGTTCTACTTCTaGCCACTAGGTGGCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: FVMVSINLVSTVLPGNHRSKFYF*PLGGTR Trigger: TCTGGTGCCACCTAGTGGTCAGAAGTAGAACTTGGA...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATTGGTCTAGCTTGTGGTaGCTTTGCCACCTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYWSSLW*LCHLHI Trigger: TATGTGAAGGTGGCAAAGCCACCACAAGCTAGACCA...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATAGCTTGTGGTGGCTTTaGCACCTTCACATAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYSLWWL*HLHIIC Trigger: ACAGATTATGTGAAGGTGGCAAAGCCACCACAAGCT...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CAA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCTTTAGCCACCCTCTaGAGCCCGGTGGGCTCCGCG | + |
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Preference number: 3 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRPLATL*SPVGSA Trigger: CGCGGAGCCCACCGGGCTCAAGAGGGTGGCTAAAGG...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR TCA 72 bp | CTGTGCACTGGCGAAGAGCAGGCTAAGAAGCCTCTGTaGCTGTCCTTTAGCCACCCTCTTGAGCCCGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LCTGEEQAKKPL*LSFSHPLEPGG Trigger: CCCACCGGGCTCAAGAGGGTGGCTAAAGGACAGTCACAGAGGCTTCTTAGCCTGCTCTTCGCCAGTGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGAGAAAATCCGGAGCAAAACGTGAGTTCTTCAGGACAGCTGCCGTCTCCCCTTTAGCCACCCTCTaGAGCCCGGTGGGCTCCGCG | + |
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Preference number: 3 (lower is better) Translates to: VKRKSGAKREFFRTAAVSPLATL*SPVGSA Trigger: CGCGGAGCCCACCGGGCTCAAGAGGGTGGCTAAAGG...GGAGACGGCAGCTGTCCTGAAGAACTCACGTTTTGCTCCGGATTTTCTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR GCA 72 bp | CTCCGCGCTGGCTGTAGATCTAGCAGTTTTTCCTCTTaGCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTC | + |
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Preference number: 3 (lower is better) Translates to: LRAGCRSSSFSS*HSSLPCLQVHV Trigger: GACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCTAGATCTACAGCCAGCGCGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR TCA 72 bp | CCAAACGTGGAGGGCAGAACCCAATCTTTTGGGCAATaGTGGCAAGATCCTTCCAGTACAGAGCGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PNVEGRTQSFGQ*WQDPSSTERLP Trigger: TGGGAGGCGCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR CCA 72 bp | GCAGTGACCAAACGTGGAGGGCAGAACCCAATCTTTTaGGCAATGATGGCAAGATCCTTCCAGTACAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: AVTKRGGQNPIF*AMMARSFQYRA Trigger: CGCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR TCA 72 bp | GTCAACAGGTGTGAAGAGAAAATCCGGAGCAAAACGTaGGTTCTTCAGGACAGCTGCCGTCTCCTCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: VNRCEEKIRSKT*VLQDSCRLLIH Trigger: GTGGATGAGGAGACGGCAGCTGTCCTGAAGAACTCACGTTTTGCTCCGGATTTTCTCTTCACACCTGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAACCTTTAGCCACCCTCTaGAGCCCGGTGGGCTCCGCG | + |
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Preference number: 3 (lower is better) Translates to: MVSINLVSTVLPGNHREEPLATL*SPVGSA Trigger: CGCGGAGCCCACCGGGCTCAAGAGGGTGGCTAAAGG...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACCTTTAGCCACCCTCTaGAGCCCGGTGGGCTCCGCG | + |
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Preference number: 3 (lower is better) Translates to: FVMVSINLVSTVLPGNHRPLATL*SPVGSA Trigger: CGCGGAGCCCACCGGGCTCAAGAGGGTGGCTAAAGG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR-3UTR CAA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTTCTGTCTTAGGGAGTTaGAAGAGGCGAAATGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSSVLGS*KRRNVA Trigger: TGCCACATTTCGCCTCTTCAAACTCCCTAAGACAGA...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAACCCAATCTTTTGGGCAATGATGGCAAGATCCTTCCAGTACAGAGCGCCAAAACTTTGTGCGACTaGATGTCTTCTGGCACTTCA | + |
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Preference number: 3 (lower is better) Translates to: AEPNLLGNDGKILPVQSAKTLCD*MSSGTS Trigger: TGAAGTGCCAGAAGACATCAAGTCGCACAAAGTTTT...GGCGCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR CCA 72 bp | GTTTTCAACAGTAATGATATCGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTTTTGGGCAATGATGGC | + |
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Preference number: 3 (lower is better) Translates to: VFNSNDIGSDQT*RAEPNLLGNDG Trigger: GCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCCGATATCATTACTGTTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR CCA 72 bp | GATTCCTCCATTGTAAACAACTCGGCATCTTTCGGCTaGCTCTGTCTTAGGGAGTTTGAAGAGGCGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: DSSIVNNSASFG*LCLREFEEAKC Trigger: ACATTTCGCCTCTTCAAACTCCCTAAGACAGAGCCAGCCGAAAGATGCCGAGTTGTTTACAATGGAGGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| 3UTR TCA 72 bp | ATAATTCTCACAACGTTGATGATGCCTTTGGCCCTTTaGGTAAACCTTGGGCTTCCAAGTTCTACTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: IILTTLMMPLAL*VNLGLPSSTSD Trigger: GTCAGAAGTAGAACTTGGAAGCCCAAGGTTTACTCAAAGGGCCAAAGGCATCATCAACGTTGTGAGAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| 3UTR TCA 72 bp | AATTTGCATCGAAAATTAGTTCCTTTTCATGTCCCTTaGTTCCTCCATTGTAAACAACTCGGCATCTTTCGG | + |
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Preference number: 3 (lower is better) Translates to: NLHRKLVPFHVP*FLHCKQLGIFR Trigger: CCGAAAGATGCCGAGTTGTTTACAATGGAGGAATCAAGGGACATGAAAAGGAACTAATTTTCGATGCAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS-3UTR CCA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTAACTCAGAACGGCCCTaGGGAGCTGGCAGCGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSNSERP*GAGSEA Trigger: CGCCTCGCTGCCAGCTCCCCAGGGCCGTTCTGAGTT...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACAACTCAGAACGGCCCTaGGGAGCTGGCAGCGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHNSERP*GAGSEA Trigger: CGCCTCGCTGCCAGCTCCCCAGGGCCGTTCTGAGTT...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR GCA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGAGCAGTTTTTCCTCTTaGCACAGCAGCCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRSSFSS*HSSLPC Trigger: GCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCT...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCTAACTCAGAACGGCCCTGGGGAGCTGGCAGCGAGGCGTCAACAGGTGCAGAACCCAATCTTTTaGGCAATGATGGCAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTQNGPGELAARRQQVQNPIF*AMMARS Trigger: GGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTG...CACCTGTTGACGCCTCGCTGCCAGCTCCCCAGGGCCGTTCTGAGTTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236465.2 |
||
| 3UTR CAA 72 bp | CCTCCCGTGCCTTCAGGTGCATGTCTGGGCTTCATCTaGTCAGAGTCCTCTGCAAGCTTGAATGGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVPSGACLGFI*SESSASLNGSL Trigger: CAGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
||
| CDS-3UTR CCA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRGSDQT*RAEPNL Trigger: AAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCC...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| 3UTR CAA 72 bp | GGCAGTGACCAAACGTGGAGGGCAGAACCCAATCTTTaGGGCAATGATGGCAAGATCCTTCCAGTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSDQTWRAEPNL*GNDGKILPVQS Trigger: GCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCGTCTCCTCATCCACTaGAACAGCTTCGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSRLLIH*NSFAFL Trigger: AAGGAAGGCGAAGCTGTTGCAGTGGATGAGGAGACG...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGCTTGAATGGAGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGACLGFILSESSASLNGGSDQT*RAEPNL Trigger: AAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCC...TCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236465.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTAGGCGTCAACAGGTGTaGAGAGAAAATCCGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSRRQQV*RENPEQ Trigger: TTGCTCCGGATTTTCTCTTCACACCTGTTGACGCCT...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCTTGTCAGAGTCCTCTaGAAGCTTGAATGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRLVRVL*KLEWIS Trigger: AGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAG...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGCAGTTTTTCCTCTTGCCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCGTCACATTGGGTGCCTaGAAACCAAATTTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFSSCHSSLPCLQVHVVTLGA*KPNFSM Trigger: CATGGAAAAATTTGGTTTCCAGGCACCCAATGTGAC...GACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACTCATGTCTATTCCGGTaGCATGTCCCTTCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHSCLFR*HVPSHQ Trigger: TTGGTGAGAAGGGACATGTCACCGGAATAGACATGA...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003655.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGCAGTTTTTCCTCTTGCCACAGCAGCCTCCCGTGCCTTCAGGTGCATGTCCCTTTTCATGTCCCTTaGTTCCTCCATTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSFSSCHSSLPCLQVHVPFHVP*FLHCKQ Trigger: TTGTTTACAATGGAGGAATCAAGGGACATGAAAAGG...GACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236465.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACCGACTTGATGTCTTCTaGCACTTCAAGGCTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHRLDVF*HFKAGI Trigger: TATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCG...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACCTTGTCAGAGTCCTCTaGAAGCTTGAATGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHLVRVL*KLEWIS Trigger: AGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAG...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACACACAAGCATTAGTCTaGAGGTCTGCAGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHTQALV*RSADVF Trigger: GAAGACATCTGCAGACCTCCAGACTAATGCTTGTGT...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003655.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACCAGAACCCAATCTTTTaGGCAATGATGGCAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHQNPIF*AMMARS Trigger: GGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTG...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACACAGCAGCCTCCCGTaGCTTCAGGTGCATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRHSSLP*LQVHVW Trigger: CCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAACACAGCAGCCTCCCGTaGCTTCAGGTGCATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVSINLVSTVLPGNHREEHSSLP*LQVHVW Trigger: CCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTG...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACGTCACATTGGGTGCCTaGAAACCAAATTTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHVTLGA*KPNFSM Trigger: CATGGAAAAATTTGGTTTCCAGGCACCCAATGTGAC...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACCCTTTTCATGTCCCTTaGTTCCTCCATTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHPFHVP*FLHCKQ Trigger: TTGTTTACAATGGAGGAATCAAGGGACATGAAAAGG...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATAGCAGTTTTTCCTCTTaGCACAGCAGCCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYSSFSS*HSSLPC Trigger: GCACGGGAGGCTGCTGTGGCAAGAGGAAAAACTGCT...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| 3UTR CAA 72 bp | ACAAAGCGACAGTCACCAAGAACCCCTTCGAGCTCCTaGTTTTCAACAGTAATGATATCGGCAGTGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKRQSPRTPSSS*FSTVMISAVTK Trigger: TTTGGTCACTGCCGATATCATTACTGTTGAAAACAAGGAGCTCGAAGGGGTTCTTGGTGACTGTCGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATGCACATAGCAATCCCTaGCACTCCCACTACCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYAHSNP*HSHYPD Trigger: ATCTGGGTAGTGGGAGTGGCAGGGATTGCTATGTGC...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003655.9 |
||
| CDS-3UTR GCA 90 bp | GCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGCTTGAATGGATCTCTGAAAAGTCACATTGGGTaGCTGGAAACCAAATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGFILSESSASLNGSLKSHIG*LETKFF Trigger: GAAAAATTTGGTTTCCAGGCACCCAATGTGACTTTT...CAGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| 3UTR CAA 72 bp | TGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGCTaGAATGGATCTCTGATTAGAACCTTTGTCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLGFILSESSAS*NGSLIRTFVSN Trigger: GTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236063.2 ENSMUST00000236465.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACGTCTCCTCATCCACTaGAACAGCTTCGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRRLLIH*NSFAFL Trigger: AAGGAAGGCGAAGCTGTTGCAGTGGATGAGGAGACG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGGCAGTGACCAAACGTaGAGGGCAGAACCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRGSDQT*RAEPNL Trigger: AAGATTGGGTTCTGCCCTCCACGTTTGGTCACTGCC...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATCGACTTGATGTCTTCTaGCACTTCAAGGCTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYRLDVF*HFKAGI Trigger: TATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCG...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATGTCACATTGGGTGCCTaGAAACCAAATTTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYVTLGA*KPNFSM Trigger: CATGGAAAAATTTGGTTTCCAGGCACCCAATGTGAC...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATGGAGAAAAGTCACATTaGGTGCCTGGAAACCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYGEKSH*VPGNQI Trigger: AATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCC...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACAGAACCCAATCTTTTaGGCAATGATGGCAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRQNPIF*AMMARS Trigger: GGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACCTTTTCATGTCCCTTaGTTCCTCCATTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRPFHVP*FLHCKQ Trigger: TTGTTTACAATGGAGGAATCAAGGGACATGAAAAGG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAAAAAGTCACATTGGGTaGCTGGAAACCAAATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVMVSINLVSTVLPGNHRKSHIG*LETKFF Trigger: GAAAAATTTGGTTTCCAGGCACCCAATGTGACTTTT...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTCTAACTCAGAACGGCCCTGGGGAGCTGGCAGCGAGGCGTCAACAGGTGTGGAGAAAAGTCACATaGGGTGCCTGGAAACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTQNGPGELAARRQQVWRKVT*GAWKPN Trigger: ATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCA...CACCTGTTGACGCCTCGCTGCCAGCTCCCCAGGGCCGTTCTGAGTTAGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| CDS CCA 90 bp | CTCTCACTCTGGATCCCAGCCTCTGCCAACTTCTCGATGCGGCCGTaGAGAAAAGTCACATTGGGTGCCTGGAAACCAAATTTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLWIPASANFSMRP*RKVTLGAWKPNFSM Trigger: CATGGAAAAATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAGTGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS GCA 90 bp | TATCATAGCTCTCACTCTGGATCCCAGCCTCTGCCAACTTCTCGATaGGGCCGTGGAGAAAAGTCACATTGGGTGCCTGGAAACCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: YHSSHSGSQPLPTSR*GRGEKSHWVPGNQI Trigger: AATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAGTGAGAGCTATGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS GCA 90 bp | GTTGGATATGACAATATCATAGCTCTCACTCTGGATCCCAGCCTCTaGCAACTTCTCGATGCGGCCGTGGAGAAAAGTCACATTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGYDNIIALTLDPSL*QLLDAAVEKSHIGC Trigger: GCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAGTGAGAGCTATGATATTGTCATATCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS GCA 90 bp | ATAACACAGTTGGATTCTGGATCCCAGCCTCTGCCAACTTCTCGATaGGGCCGTGGAGAAAAGTCACATTGGGTGCCTGGAAACCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: ITQLDSGSQPLPTSR*GRGEKSHWVPGNQI Trigger: AATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAATCCAACTGTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
||
| CDS-3UTR CAA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGACAGCTTCGCCTTCCTaGAATGTGAAATTTGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRTASPS*NVKFAS Trigger: CGATGCAAATTTCACATTCAAGGAAGGCGAAGCTGT...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
||
| CDS-3UTR CAA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGAAAACTTTGTGCGACTaGATGTCTTCTGGCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRKTLCD*MSSGTS Trigger: TGAAGTGCCAGAAGACATCAAGTCGCACAAAGTTTT...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTGCAGAACCCAATCTTTaGGGCAATGATGGCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSAEPNL*GNDGKI Trigger: GATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGC...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTCACTCTGTCTTAGGGAGTTaGAAGAGGCGAAATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRRTQRCPVVGQKEDNSHSVLGS*KRRNVA Trigger: TGCCACATTTCGCCTCTTCAAACTCCCTAAGACAGA...GTGAGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGCATGTCTGGGCTTCATCTTGTCAGAGTCCTCTGCAAGCTTGAATGGATCTGTCTTAGGGAGTTaGAAGAGGCGAAATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGACLGFILSESSASLNGSVLGS*KRRNVA Trigger: TGCCACATTTCGCCTCTTCAAACTCCCTAAGACAGA...TCCATTCAAGCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236465.2 |
||
| CDS CCA 90 bp | GACTTGTTGTTTATCAGGAACAAGGTTGATAACACAGTTGGATTCTaGATCCCAGCCTCTGCCAACTTCTCGATGCGGCCGTGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLLFIRNKVDNTVGF*IPASANFSMRPWRK Trigger: TTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAATCCAACTGTGTTATCAACCTTGTTCCTGATAAACAACAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS-3UTR CAA 90 bp | TTTGTGCGACTTGATGTCTTCTGGCACTTCAAGGCTGGCATAGACGTCACTGAAGACCTCCTGGAGGACTaGTTGTTTATCAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: FVRLDVFWHFKAGIDVTEDLLED*LFIRNK Trigger: CTTGTTCCTGATAAACAACAAGTCCTCCAGGAGGTC...TTCAGTGACGTCTATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCGCACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGAAAATCCGGAGCAAAACGTGAGTTCTTCAGGACAGCTGCCGTCTCCAAAACTTTGTGCGACTaGATGTCTTCTGGCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: VKRKSGAKREFFRTAAVSKTLCD*MSSGTS Trigger: TGAAGTGCCAGAAGACATCAAGTCGCACAAAGTTTT...GGAGACGGCAGCTGTCCTGAAGAACTCACGTTTTGCTCCGGATTTTCTCTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236465.2 |
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| CDS-3UTR CAA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTACAGCTTCGCCTTCCTaGAATGTGAAATTTGCATCG | + |
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Preference number: 5 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSTASPS*NVKFAS Trigger: CGATGCAAATTTCACATTCAAGGAAGGCGAAGCTGT...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | GTACTGTGCTTCCTGGTAACCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGTTATCAGGAACAAGGTaGATAACACAGTTGGATATG | + |
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Preference number: 5 (lower is better) Translates to: VLCFLVTTEKNPEVSCGRLSGTR*ITQLDM Trigger: CATATCCAACTGTGTTATCAACCTTGTTCCTGATAA...CCTACCACAGGACACCTCTGGGTTCTTCTCTGTGGTTACCAGGAAGCACAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | TTGAATGGATCTCTGATTAGAACCTTTGTCTCTAACTCAGAACGGCCCTGGGGACTCCTGGAGGACTTGTaGTTTATCAGGAACAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: LNGSLIRTFVSNSERPWGLLEDL*FIRNKV Trigger: AACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAG...TCCCCAGGGCCGTTCTGAGTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS-3UTR CAA 90 bp | TCTTTCGGCTGGCTCTGTCTTAGGGAGTTTGAAGAGGCGAAATGTGGCAGACACTTATCAGGAACAAGGTaGATAACACAGTTGGATTCT | + |
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Preference number: 5 (lower is better) Translates to: SFGWLCLREFEEAKCGRHLSGTR*ITQLDS Trigger: AGAATCCAACTGTGTTATCAACCTTGTTCCTGATAA...GTGTCTGCCACATTTCGCCTCTTCAAACTCCCTAAGACAGAGCCAGCCGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS-3UTR CAA 90 bp | CCACAGAGAAGAACCCAGAGGTGTCCTGTGGTAGGCCAGAAGGAAGATAATTCTTTATCAGGAACAAGGTaGATAACACAGTTGGATATG | + |
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Preference number: 5 (lower is better) Translates to: PQRRTQRCPVVGQKEDNSLSGTR*ITQLDM Trigger: CATATCCAACTGTGTTATCAACCTTGTTCCTGATAA...AGAATTATCTTCCTTCTGGCCTACCACAGGACACCTCTGGGTTCTTCTCTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAATGTCTGGGCTTCATCTaGTCAGAGTCCTCTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREECLGFI*SESSAS Trigger: GCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACA...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGATGTCTGGGCTTCATCTaGTCAGAGTCCTCTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: FVMVSINLVSTVLPGNHRCLGFI*SESSAS Trigger: GCTTGCAGAGGACTCTGACAAGATGAAGCCCAGACA...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGCGATTTGCTGTGAACCTTCAATTAACATCCTCTAAAAGTCACTCTTATTGGAGAAAAGTCACATaGGGTGCCTGGAAACCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SRRFAVNLQLTSSKSHSYWRKVT*GAWKPN Trigger: ATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCA...ATAAGAGTGACTTTTAGAGGATGTTAATTGAAGGTTCACAGCAAATCGCCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAAGACCTCCTGGAGGACTaGTTGTTTATCAGGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREEDLLED*LFIRNK Trigger: CTTGTTCCTGATAAACAACAAGTCCTCCAGGAGGTC...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAAGCAGAACCCAATCTTTaGGGCAATGATGGCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREEAEPNL*GNDGKI Trigger: GATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGC...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAATGGAGAAAAGTCACATaGGGTGCCTGGAAACCAAAT | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREEWRKVT*GAWKPN Trigger: ATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCA...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | TTTGTCATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGACTCCTGGAGGACTTGTaGTTTATCAGGAACAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: FVMVSINLVSTVLPGNHRLLEDL*FIRNKV Trigger: AACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAG...TCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCATGACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAACTCCTGGAGGACTTGTaGTTTATCAGGAACAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREELLEDL*FIRNKV Trigger: AACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAG...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGCATAAATTTAGTAAGTACTGTGCTTCCTGGTAACCACAGAGAAGAAAAAACTTTGTGCGACTaGATGTCTTCTGGCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: MVSINLVSTVLPGNHREEKTLCD*MSSGTS Trigger: TGAAGTGCCAGAAGACATCAAGTCGCACAAAGTTTT...TTCTTCTCTGTGGTTACCAGGAAGCACAGTACTTACTAAATTTATGCTAACCAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236465.2 ENSMUST00000237219.2 |
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| CDS GCA 72 bp | TTGGATTCTGGATCCCAGCCTCTGCCAACTTCTCGATaGGGCCGTGGAGAAAAGTCACATTGGGTGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LDSGSQPLPTSR*GRGEKSHWVPG Trigger: TCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS TCA 72 bp | TGTCTTCTGGCACTTCAAGGCTGGCATAGACGTCACTaGAATAGAGCTCCCCGCCGTGCTTCAGCACTCGAT | + |
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Preference number: 6 (lower is better) Translates to: CLLALQGWHRRH*NRAPRRASALD Trigger: ATCGAGTGCTGAAGCACGGCGGGGAGCTCTATTTCAGTGACGTCTATGCCAGCCTTGAAGTGCCAGAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS CCA 72 bp | TGGATCCCAGCCTCTGCCAACTTCTCGATGCGGCCGTaGAGAAAAGTCACATTGGGTGCCTGGAAACCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WIPASANFSMRP*RKVTLGAWKPN Trigger: ATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003655.9 ENSMUST00000236063.2 ENSMUST00000237219.2 |
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| CDS CAA 90 bp | GAGCTCCCCGCCGTGCTTCAGCACTCGATAGACCTCCTGGAGGACTaGTTGTTTATCAGGAACAAGGTTGATAACACAGTTGGATATGAC | + |
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Preference number: 6 (lower is better) Translates to: ELPAVLQHSIDLLED*LFIRNKVDNTVGYD Trigger: GTCATATCCAACTGTGTTATCAACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAGGTCTATCGAGTGCTGAAGCACGGCGGGGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS CAA 90 bp | TCCTGGAGGACTTGTTGTTTATCAGGAACAAGGTTGATAACACAGTaGGATTCTGGATCCCAGCCTCTGCCAACTTCTCGATGCGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SWRTCCLSGTRLITQ*DSGSQPLPTSRCGR Trigger: ACGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAATCCAACTGTGTTATCAACCTTGTTCCTGATAAACAACAAGTCCTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS CCA 72 bp | TTTATCAGGAACAAGGTTGATAACACAGTTGGATTCTaGATCCCAGCCTCTGCCAACTTCTCGATGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: FIRNKVDNTVGF*IPASANFSMRP Trigger: CGGCCGCATCGAGAAGTTGGCAGAGGCTGGGATCCAGAATCCAACTGTGTTATCAACCTTGTTCCTGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236063.2 |
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| CDS CAA 90 bp | CTCCCCGCCGTGCTTCAGCACTCGATAGACCTCCTGGAGGACTTGTaGTTTATCAGGAACAAGGTTGATAACACAGTTGGATATGACAAT | + |
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Preference number: 6 (lower is better) Translates to: LPAVLQHSIDLLEDL*FIRNKVDNTVGYDN Trigger: ATTGTCATATCCAACTGTGTTATCAACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAGGTCTATCGAGTGCTGAAGCACGGCGGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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| CDS CAA 72 bp | GCCGTGCTTCAGCACTCGATAGACCTCCTGGAGGACTaGTTGTTTATCAGGAACAAGGTTGATAACACAGTT | + |
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Preference number: 6 (lower is better) Translates to: AVLQHSIDLLED*LFIRNKVDNTV Trigger: AACTGTGTTATCAACCTTGTTCCTGATAAACAACAAGTCCTCCAGGAGGTCTATCGAGTGCTGAAGCACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003655.9 ENSMUST00000237219.2 |
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