Pregenerated sensors for ARX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035277Ensembl transcript IDs: ENSMUST00000046565.13, ENSMUST00000113947.6
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTaGCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: WTASGGGATSFSAKN*LVRFQAAAKAAALC Trigger: ACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR TCA 90 bp | AGTGAGCTGGTCCTCTGTTTCCATTTGGTCTTGAGTGGTGCTGAGTaGGGTGACCTTTCGGGGAACGCCCTAGGGGCGCAAGGGCGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SELVLCFHLVLSGAE*GDLSGNALGAQGRR Trigger: CCTCCGCCCTTGCGCCCCTAGGGCGTTCCCCGAAAGGTCACCTCACTCAGCACCACTCAAGACCAAATGGAAACAGAGGACCAGCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTCCGCTTCCAAGCTGCTaGGAAGGCGGCTGCGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTPLPSC*EGGCAL Trigger: CAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGG...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR CAA 90 bp | CAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTaGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QPVEEVPHPLAPRTA*SASKLLRRRLRSVC Trigger: ACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTTGTCCGCTTCCAAGGTTTCCATTTGGTCTTaGGTGGTGCTGAGTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VEEVPHPLAPRTALSASKVSIWS*VVLSEV Trigger: CACCTCACTCAGCACCACTCAAGACCAAATGGAAAC...CTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTGGCATCTGTTTAGCCGACTTTGAGTTGGAGTaGCATTGGCAGTGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LAILQIRIRFPGPGICLADFELE*HWQWQG Trigger: CCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTC...GGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTTCGCTTCCCTGGCCCTaGCATCTGTTTAGCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TRTRRPFPLSALLAILQISLPWP*HLFSRA Trigger: GGCCCGGCTAAACAGATGCCAGGGCCAGGGAAGCGA...AATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTGGCATCTGTTTAGCCGTTTCCATTTGGTCTTaGGTGGTGCTGAGTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LAILQIRIRFPGPGICLAVSIWS*VVLSEV Trigger: CACCTCACTCAGCACCACTCAAGACCAAATGGAAAC...GGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGGCTGCGCTCTGTCTGTaGCTTCTTGGGAGTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSFKCTVSYLTDSHSLPWAALCL*LLGSEL Trigger: CAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGC...CCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCGGGCCGCGCTTAAATCAACATAGAGCGCCAAAATGCTATTCAAAAGAACAGGTGGACAGCCAGTaGAGGAGGTGCCACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: LAGPRLNQHRAPKCYSKEQVDSQ*RRCHIL Trigger: AAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTG...TTCTTTTGAATAGCATTTTGGCGCTCTATGTTGATTTAAGCGCGGCCCGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR CCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTAGGGACAAGGGCAGGTaGACAGCCAGTGGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HSLVTSTVHILAEYFPLVRDKGR*TASGGG Trigger: ACCTCCTCCACTGGCTGTCCACCTGCCCTTGTCCCT...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGTCGCATTCGCTTCCCTaGCCCTGGCATCTGTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: RTRTRRPFPLSALLAILQSHSLP*PWHLFS Trigger: GCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGA...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTTTGAGTGGTGCTGAGTaGGGTGACCTTTCGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: HSLVTSTVHILAEYFPLVLSGAE*GDLSGN Trigger: GTTCCCCGAAAGGTCACCTCACTCAGCACCACTCAA...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTTGTTGAGTGGTGCTGAGTaGGGTGACCTTTCGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QFGDFNSPYSSRVFPFGLLSGAE*GDLSGN Trigger: GTTCCCCGAAAGGTCACCTCACTCAGCACCACTCAA...CAAACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR-3UTR TCA 90 bp | ATTACACAAAAGTACTGTACCATTGCCTTTATCTTGAAGGTTTCCGAAGCCTCTTTTACCATACCACGCTaGGTGCAATTGCGTTATAAC | + |
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Preference number: 2 (lower is better) Translates to: ITQKYCTIAFILKVSEASFTIPR*VQLRYN Trigger: GTTATAACGCAATTGCACTCAGCGTGGTATGGTAAA...AGAGGCTTCGGAAACCTTCAAGATAAAGGCAATGGTACAGTACTTTTGTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
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| 3UTR GCA 72 bp | AGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTaGCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: SGGGATSFSAKN*LVRFQAAAKAA Trigger: AGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR GCA 72 bp | TTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTaGCTTCTTGGGAGTGAGCTGGTCCTCTGTTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: FQAAAKAAALCL*LLGSELVLCFH Trigger: ATGGAAACAGAGGACCAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR TCA 72 bp | GTCCTCTGTTTCCATTTGGTCTTGAGTGGTGCTGAGTaGGGTGACCTTTCGGGGAACGCCCTAGGGGCGCAA | + |
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Preference number: 3 (lower is better) Translates to: VLCFHLVLSGAE*GDLSGNALGAQ Trigger: TTGCGCCCCTAGGGCGTTCCCCGAAAGGTCACCTCACTCAGCACCACTCAAGACCAAATGGAAACAGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR TCA 72 bp | GAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTaGGCTGGTCCTCTGTTTCCATTTGGTCTTGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: EGGCALSVPSWE*AGPLFPFGLEW Trigger: CCACTCAAGACCAAATGGAAACAGAGGACCAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR CCA 72 bp | AGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTaGCATCTGTTTAGCCGGGCCGCGCTTAAATCAACA | + |
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Preference number: 3 (lower is better) Translates to: SYLTDSHSLPWP*HLFSRAALKST Trigger: TGTTGATTTAAGCGCGGCCCGGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR CCA 72 bp | ACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTaGCCCTGGCATCTGTTTAGCCGGGCCGCGCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: TVSYLTDSHSLP*PWHLFSRAALK Trigger: TTTAAGCGCGGCCCGGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR CCA 72 bp | TTCAGTAAGGTAAAAACGGGAGAGTGGACTTTGAGTTaGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: FSKVKTGEWTLS*SDIGSGRGRDR Trigger: CCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCACTCTCCCGTTTTTACCTTACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCCCTCCTCCGAGTCGCTaGCGGCCGACAGGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: TALSASKLLRRRLRSVCAPPPSR*RPTGTR Trigger: GCGTGTGCCTGTCGGCCGGCAGCGACTCGGAGGAGG...GGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTGAGCTGGCAGCTCGTCCAGGGCTaGCGGCGGGGGCACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: KLLRRRLRSVCAFLGVSWQLVQG*RRGHEG Trigger: CCCTTCGTGCCCCCGCCGCCAGCCCTGGACGAGCTG...CCAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | AACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCGGCCACTGTGCCGGTaGTGGCCACCGAGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: NCLVRFQAAAKAAALCLCRPLCR*WPPSSA Trigger: GGCGCTGCTCGGTGGCCACCACCGGCACAGTGGCCG...GCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | AAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTGAGCTGGACGCTCCCCTGGCCGTaGAGCTGGTGGTGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KLLRRRLRSVCAFLGVSWTLPWP*SWWWRW Trigger: CCACCGCCACCACCAGCTGCACGGCCAGGGGAGCGT...CCAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | GCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCCCCTGGCCGTGCAGCTaGTGGTGGCGGTGGAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: ALSASKLLRRRLRSVCAFPWPCS*WWRWRN Trigger: GTTCCTCCACCGCCACCACCAGCTGCACGGCCAGGG...GAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTCCTGGTCAGCGCGGCTaGCCAGCGGGGCAGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTPGQRG*PAGQAS Trigger: GCTTGCCTGCCCCGCTGGCCAGCCGCGCTGACCAGG...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCGCCTCAGCGCGGCTATaGTTGACGCGCGTCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TALSASKLLRRRLRSVCAASARL*LTRVCL Trigger: CAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGC...GGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | TTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGCGCCGCAGCTTGGGTaGCAGGTGCAGCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSASKLLRRRLRSVCAFLAPQLG*QVQLSL Trigger: GAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGC...CAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGCGGCCACTGTGCCGGTaGTGGCCACCGAGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRRPLCR*WPPSSA Trigger: GGCGCTGCTCGGTGGCCACCACCGGCACAGTGGCCG...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGAGCCGAGAGCGGCCCTaGAAAGGGCAGCCCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRSRERP*KGQPRG Trigger: CCCCCGGGGCTGCCCTTTCCAGGGCCGCTCTCGGCT...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR TCA 90 bp | ACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCACGACTTGCTACGACTaGTGCTCACCTGCGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: TALSASKLLRRRLRSVCATTCYD*CSPAAP Trigger: AGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGT...GGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | GCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTCGGCGTCCTCCGGGTaGAGCAACAGCTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ALSASKLLRRRLRSVCAFSASSG*SNSSSL Trigger: CAAGGAAGAGCTGTTGCTGCACCCGGAGGACGCCGA...GAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | TTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTGAGAGAGGCGCCGCAGCTTaGGTGGCAGGTGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FQAAAKAAALCLCLLGSERGAAA*VAGAAQ Trigger: CTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCT...CTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR TCA 90 bp | TTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGCCAGCTGGTAACTGGTaGACGTGGTGCGGTAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSASKLLRRRLRSVCAFLPAGNW*TWCGSA Trigger: GGCGCTACCGCACCACGTTCACCAGTTACCAGCTGG...CAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR TCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGCAGCGCGGCTATGCTTaGCGCGCGTCTGTCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRQRGYA*RASVCR Trigger: GCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTG...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGGCAGGATGTTGAGCTaGGTGAGCTGCGCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTGRMLS*VSCAAC Trigger: GCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCC...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| 3UTR CAA 72 bp | GAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTaGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: EEVPHPLAPRTA*SASKLLRRRLR Trigger: GCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTAGCTTGGGTGGCAGGTaGAGCTCAGCCTCGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTSLGGR*SSASNG Trigger: CCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCT...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | TTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTGAGGGTAGCGCCTCTGTTTaGGCTTCAGCAGCCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FQAAAKAAALCLCLLGSEGSASV*ASAAPP Trigger: AGGAGGGGCTGCTGAAGCGCAAACAGAGGCGCTACC...CTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGTGTCCTCACCATCCTTaGCCTCGGCGTCCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRCPHHP*PRRPPG Trigger: ACCCGGAGGACGCCGAGGGCAAGGATGGTGAGGACA...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | GTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTTGTCCGCTTCCAAGGTGAGCTGCGCGGCGTaGTCCTTAGCCTTGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VEEVPHPLAPRTALSASKVSCAA*SLALSL Trigger: GAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCAC...CTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR GCA 90 bp | GTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTTGTCCGCTTCCAAGACACCTCCTTCCCCGTaGTGGTGCCCGGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VEEVPHPLAPRTALSASKTPPSP*WCPAGC Trigger: ACATCCTGCCGGGCACCAGCACGGGGAAGGAGGTGT...CTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CCA 90 bp | TTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTGGCATCTGTTTAGCCAGCCGAGAGCGGCCCTaGAAAGGGCAGCCCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAILQIRIRFPGPGICLASRERP*KGQPRG Trigger: CCCCCGGGGCTGCCCTTTCCAGGGCCGCTCTCGGCT...GGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCCTTGTCCGCTTCCAAGGGTAGCGCCTCTGTTTaGGCTTCAGCAGCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VEEVPHPLAPRTALSASKGSASV*ASAAPP Trigger: AGGAGGGGCTGCTGAAGCGCAAACAGAGGCGCTACC...CTTGGAAGCGGACAAGGCAGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTTTCTGGAACCACACCTaGACTCGGGCCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTFWNHT*TRASVR Trigger: CCTGACAGAGGCCCGAGTCCAGGTGTGGTTCCAGAA...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGTGGGGGAGCCTTGCATaGCTTTTTCCTGGTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRWGSLA*LFPGQR Trigger: GCGCTGACCAGGAAAAAGCCATGCAAGGCTCCCCCA...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | CGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTCCTCCGAGTCGCTaGCGGCCGACAGGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFPLSALLAILQIRIRFPPPSR*RPTGTR Trigger: GCGTGTGCCTGTCGGCCGGCAGCGACTCGGAGGAGG...GAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGCAGCTCGTCCAGGGCTaGCGGCGGGGGCACGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQQLVQG*RRGHEG Trigger: CCCTTCGTGCCCCCGCCGCCAGCCCTGGACGAGCTG...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGACGCTCCCCTGGCCGTaGAGCTGGTGGTGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQTLPWP*SWWWRW Trigger: CCACCGCCACCACCAGCTGCACGGCCAGGGGAGCGT...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR TCA 90 bp | TTAGCCGGGCCGCGCTTAAATCAACATAGAGCGCCAAAATGCTATTCAAAAGAACAGCGCGGCTATGCTTaGCGCGCGTCTGTCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGPRLNQHRAPKCYSKEQRGYA*RASVCR Trigger: GCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTG...TTCTTTTGAATAGCATTTTGGCGCTCTATGTTGATTTAAGCGCGGCCCGGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCGCGCCGCAGCTTGGGTaGCAGGTGCAGCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSAPQLG*QVQLSL Trigger: GAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGC...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATCCTCCACCGCGGGTGTaGGCTGTCTCAGGAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NETPLSFKCTVSYLTDSHPPPRV*AVSGAQ Trigger: CTGCGCTCCTGAGACAGCCCACACCCGCGGTGGAGG...ATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGCCTCCACCGCGGGTGTaGGCTGTCTCAGGAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQPPPRV*AVSGAQ Trigger: CTGCGCTCCTGAGACAGCCCACACCCGCGGTGGAGG...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTGGCATCTGTTTAGCCTTCTCCGGCCCAGGATaGTGTCGATGCAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAILQIRIRFPGPGICLAFSGPG*CRCSRR Trigger: CCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAA...GGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCCCTCGAACGGGGCGCTaGTGCTCTTGGGGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSPRTGR*CSWGSL Trigger: AAGGCTCCCCCAAGAGCAGCAGCGCCCCGTTCGAGG...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | CGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCTTGAGCTGCGTGAGCTaGGCGGCGTGCTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPFPLSALLAILQIRIRFLSCVS*AACSLA Trigger: GGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAA...GAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTGGCCGTGCAGCTGGTaGTGGCGGTGGAGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSWPCSW*WRWRNL Trigger: GAGGTTCCTCCACCGCCACCACCAGCTGCACGGCCA...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACATGGCCGTGCAGCTGGTaGTGGCGGTGGAGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENKNETPLSFKCTVSYLTWPCSW*WRWRNL Trigger: GAGGTTCCTCCACCGCCACCACCAGCTGCACGGCCA...TGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | AACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATGTGAGCTGCGCGGCGTaGTCCTTAGCCTTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NETPLSFKCTVSYLTDSHVSCAA*SLALSL Trigger: GAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCAC...ATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TTAGCCGGGCCGCGCTTAAATCAACATAGAGCGCCAAAATGCTATTCAAAAGAAACACCTCCTTCCCCGTaGTGGTGCCCGGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGPRLNQHRAPKCYSKETPPSP*WCPAGC Trigger: ACATCCTGCCGGGCACCAGCACGGGGAAGGAGGTGT...TTCTTTTGAATAGCATTTTGGCGCTCTATGTTGATTTAAGCGCGGCCCGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | TGGACTTTGAGTTGGAGTGACATTGGCAGTGGCAGGGGTAGGGACAGGGACAGGGGAGGAGAGCAAAGTTaGAGATTTACTCTTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WTLSWSDIGSGRGRDRDRGGEQS*RFTLAL Trigger: GAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCC...CCTGTCCCTGTCCCTACCCCTGCCACTGCCAATGTCACTCCAACTCAAAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGGGGCGCTGCTGCTCTTaGGGGAGCCTTGCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQGRCCS*GSLAWL Trigger: AAGCCATGCAAGGCTCCCCCAAGAGCAGCAGCGCCC...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGGGCGCTGCTGCTCTTaGGGGAGCCTTGCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENKNETPLSFKCTVSYLTGRCCS*GSLAWL Trigger: AAGCCATGCAAGGCTCCCCCAAGAGCAGCAGCGCCC...TGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTCCCTGGCCGTGCAGCTaGTGGTGGCGGTGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGPWPCS*WWRWRN Trigger: GTTCCTCCACCGCCACCACCAGCTGCACGGCCAGGG...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | AATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTGCAATTGCGTTATAGTCCTGACGCTCCCCTaGCCGTGCAGCTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQEDKLLPYHAECNCVIVLTLP*PCSWWW Trigger: CCACCACCAGCTGCACGGCCAGGGGAGCGTCAGGAC...TATAACGCAATTGCACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTGTCCTGACGCTCCCCTaGCCGTGCAGCTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVVLTLP*PCSWWW Trigger: CCACCACCAGCTGCACGGCCAGGGGAGCGTCAGGAC...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCTCACCTGCGGCGCCTaGCTGATCTTGAGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFKCTVSYLTDSHSLPWLTCGA*LILSVS Trigger: GGACACGCTCAAGATCAGCCAGGCGCCGCAGGTGAG...CCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCGCAACAGCTCTTCCTTaGGCGACAGCTCCCCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSATALP*ATAPRP Trigger: AGGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGC...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR TCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGACGACTTGCTACGACTaGTGCTCACCTGCGGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQTTCYD*CSPAAP Trigger: AGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGT...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTCGAACGGGGCGCTGCTaGTCTTGGGGGAGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVRTGRC*SWGSLA Trigger: TGCAAGGCTCCCCCAAGAGCAGCAGCGCCCCGTTCG...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTCGAACGGGGCGCTGCTaGTCTTGGGGGAGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGRTGRC*SWGSLA Trigger: TGCAAGGCTCCCCCAAGAGCAGCAGCGCCCCGTTCG...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTCCTCGAACGGGGCGCTaGTGCTCTTGGGGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSPRTGR*CSWGSL Trigger: AAGGCTCCCCCAAGAGCAGCAGCGCCCCGTTCGAGG...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR GCA 90 bp | ACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTAGCTTGGGTGGCAGGTaGAGCTCAGCCTCGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTRRPFPLSALLAILQISLGGR*SSASNG Trigger: CCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCT...AATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCCGACTGATGCTCACCTaGGGCGCCTGGCTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSRLMLT*GAWLIL Trigger: CAAGATCAGCCAGGCGCCGCAGGTGAGCATCAGTCG...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTTGGGCAGGATGTTGAGCTaGGTGAGCTGCGCGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QFGDFNSPYSSRVFPFGLGRMLS*VSCAAC Trigger: GCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCC...CAAACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTAGAGGCGCCGCAGCTTaGGTGGCAGGTGCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGRGAAA*VAGAAQ Trigger: CTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCT...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCTCACCTGCGGCGCCTaGCTGATCTTGAGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRTRRPFPLSALLAILQILTCGA*LILSVS Trigger: GGACACGCTCAAGATCAGCCAGGCGCCGCAGGTGAG...AATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR TCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTCCAGCTGGTAACTGGTaGACGTGGTGCGGTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVPAGNW*TWCGSA Trigger: GGCGCTACCGCACCACGTTCACCAGTTACCAGCTGG...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR TCA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTCCAGCTCCTCCCTGGTaGAGACGTCAGGGTAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGPAPPW*RRQGSA Trigger: CGCACTACCCTGACGTCTTCACCAGGGAGGAGCTGG...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGCCCTGGCATCTGTTTAGCCTTGGAGATTTACTCTTaGACTCCGGCCTCTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAILQIRIRFPGPGICLALEIYS*TPASQS Trigger: GCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAA...GGCTAAACAGATGCCAGGGCCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGTTCTCCGGCCCAGGATaGTGTCGATGCAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRTRRPFPLSALLAILQFSGPG*CRCSRR Trigger: CCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAA...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTTCGGCGTCCTCCGGGTaGAGCAACAGCTCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRTRRPFPLSALLAILQISASSG*SNSSSL Trigger: CAAGGAAGAGCTGTTGCTGCACCCGGAGGACGCCGA...AATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | CACATTACACAAAAGTACTGTACCATTGCCTTTATCTTGAAGGTTTCCGAAGCCTGTCCTCACCATCCTTaGCCTCGGCGTCCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HITQKYCTIAFILKVSEACPHHP*PRRPPG Trigger: ACCCGGAGGACGCCGAGGGCAAGGATGGTGAGGACA...GGCTTCGGAAACCTTCAAGATAAAGGCAATGGTACAGTACTTTTGTGTAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTTGGCCTCAGCGCGGCTATaGTTGACGCGCGTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFGDFNSPYSSRVFPFGLASARL*LTRVCL Trigger: CAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGC...CAAACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTTTGAGCTGCGTGAGCTaGGCGGCGTGCTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSLSCVS*AACSLA Trigger: GGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAA...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGTGGGGGAGCCTTGCATaGCTTTTTCCTGGTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFKCTVSYLTDSHSLPWWGSLA*LFPGQR Trigger: GCGCTGACCAGGAAAAAGCCATGCAAGGCTCCCCCA...CCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | CACATTACACAAAAGTACTGTACCATTGCCTTTATCTTGAAGGTTTCCGAAGCCGCAACAGCTCTTCCTTaGGCGACAGCTCCCCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HITQKYCTIAFILKVSEAATALP*ATAPRP Trigger: AGGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGC...GGCTTCGGAAACCTTCAAGATAAAGGCAATGGTACAGTACTTTTGTGTAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR GCA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTCGACTGATGCTCACCTaGGGCGCCTGGCTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSRLMLT*GAWLIL Trigger: CAAGATCAGCCAGGCGCCGCAGGTGAGCATCAGTCG...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR GCA 90 bp | AATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTGCAATTGCGTTATACTGCTCCTAGAAAAGTaGTCAGACCCAGCGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQEDKLLPYHAECNCVILLLEK*SDPAAP Trigger: GGGCGCCGCTGGGTCTGAGCACTTTTCTAGGAGCAG...TATAACGCAATTGCACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR GCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTCTGCTCCTAGAAAAGTaGTCAGACCCAGCGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVLLLEK*SDPAAP Trigger: GGGCGCCGCTGGGTCTGAGCACTTTTCTAGGAGCAG...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | GAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAAAAGAGCCTGCCAAATaGTGGGCTGATGAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENKNETPLSFKCTVSYLTKEPAK*WADEGW Trigger: CCAGCCTTCATCAGCCCAGCATTTGGCAGGCTCTTT...TGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTTTCTGGAACCACACCTaGACTCGGGCCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVFWNHT*TRASVR Trigger: CCTGACAGAGGCCCGAGTCCAGGTGTGGTTCCAGAA...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTCCAGAAGCCTCATTTTaGATGGGCTTCTCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSPEASF*MGFSGP Trigger: TGGGCCGGAGAAGCCCATGCAAAATGAGGCTTCTGG...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTTAAGCCTCATTTTGCATaGGCTTCTCCGGCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSLVTSTVHILAEYFPLVKPHFA*ASPAQD Trigger: ATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTT...AACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTAAGCCTCATTTTGCATaGGCTTCTCCGGCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGKPHFA*ASPAQD Trigger: ATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTT...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CCA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCGGAGGAGAGCAAAGTTaGAGATTTACTCTTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: DKEENKNETPLSFKCTVSGGEQS*RFTLAL Trigger: GAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCC...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR GCA 90 bp | ATTACACAAAAGTACTGTACCATTGCCTTTATCTTGAAGGTTTCCGAAGCCTCTTTGGAGATTTACTCTTaGACTCCGGCCTCTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITQKYCTIAFILKVSEASLEIYS*TPASQS Trigger: GCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAA...AGAGGCTTCGGAAACCTTCAAGATAAAGGCAATGGTACAGTACTTTTGTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS CCA 90 bp | GCCTCAGCGCGGCTATGCTTGACGCGCGTCTGTCTGCCGCGGCGGTaGCCGGGTCGGCCAGCGCGCCCGAGGCCACTGCGCCCTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ASARLCLTRVCLPRR*PGRPARPRPLRPPP Trigger: CGGTGGAGGGCGCAGTGGCCTCGGGCGCGCTGGCCGACCCGGCCACCGCCGCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | GGTGCAGCAACAGCTCTTCCTTGGGCGACAGCTCCCCGCCCTCGGTaGCCACGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCCACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GAATALPWATAPRPR*PRRRQQRRRRRPLC Trigger: GCACAGTGGCCGCCGCCGCCGCCGCTGCTGCCGCCGCCGTGGCCACCGAGGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGCTGCACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | GAGGAGGCGGCCCCCGCCCGGGCCGTAGAGGCGCCGCAGCTTGGGTaGCAGGTGCAGCTCAGCCTCGAACGGGGCGCTGCTGCTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEAAPARAVEAPQLG*QVQLSLERGAAALG Trigger: CCCAAGAGCAGCAGCGCCCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCTACGGCCCGGGCGGGGGCCGCCTCCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | CCTGGAGGAGGCGGCCCCCGCCCGGGCCGTAGAGGCGCCGCAGCTTaGGTGGCAGGTGCAGCTCAGCCTCGAACGGGGCGCTGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGGGGPRPGRRGAAA*VAGAAQPRTGRCCS Trigger: AGAGCAGCAGCGCCCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCTACGGCCCGGGCGGGGGCCGCCTCCTCCAGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS TCA 90 bp | CGGCCACTGTGCCGGTGGTGGCCACCGAGCAGCGCCGGGGCTCCTTaGGCAGCGCGCGGGCATCGTCCTCCAGCAGCTCCTCGTCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPLCRWWPPSSAGAP*AARGHRPPAAPRRR Trigger: ACGACGACGAGGAGCTGCTGGAGGACGATGCCCGCGCGCTGCTCAAGGAGCCCCGGCGCTGCTCGGTGGCCACCACCGGCACAGTGGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS TCA 90 bp | CTGCGCGGCGTGCTCCTTAGCCTTGAGCCTCAGCGCGGCTATGCTTaGCGCGCGTCTGTCTGCCGCGGCGGTGGCCGGGTCGGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGVLLSLEPQRGYA*RASVCRGGGRVGQR Trigger: GCGCTGGCCGACCCGGCCACCGCCGCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | TGCGCTGTCCTGACGCTCCCCTGGCCGTGCAGCTGGTGGTGGCGGTaGAGGAACCTCTCCACGGGGACCTGCGGTGCCAGTGGCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAVLTLPWPCSWWWR*RNLSTGTCGASGRG Trigger: GCCACGGCCACTGGCACCGCAGGTCCCCGTGGAGAGGTTCCTCCACCGCCACCACCAGCTGCACGGCCAGGGGAGCGTCAGGACAGCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | CCGAGTCGCTGCCGGCCGACAGGCACACGCTGTCCTCACCATCCTTaGCCTCGGCGTCCTCCGGGTGCAGCAACAGCTCTTCCTTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSRCRPTGTRCPHHP*PRRPPGAATALPWA Trigger: CGCCCAAGGAAGAGCTGTTGCTGCACCCGGAGGACGCCGAGGGCAAGGATGGTGAGGACAGCGTGTGCCTGTCGGCCGGCAGCGACTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | GGCGCCCCGTTCTCGCGGTACGACTTGCTACGACTGATGCTCACCTaGGGCGCCTGGCTGATCTTGAGCGTGTCCCAGGCAGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPFSRYDLLRLMLT*GAWLILSVSQAAAA Trigger: TGCCGCCGCTGCCTGGGACACGCTCAAGATCAGCCAGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGTACCGCGAGAACGGGGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | GGTAGCGCCTCTGTTTGCGCTTCAGCAGCCCCTCCTCCGAGTCGCTaGCGGCCGACAGGCACACGCTGTCCTCACCATCCTTGCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSASVCASAAPPPSR*RPTGTRCPHHPCPR Trigger: CCGAGGGCAAGGATGGTGAGGACAGCGTGTGCCTGTCGGCCGGCAGCGACTCGGAGGAGGGGCTGCTGAAGCGCAAACAGAGGCGCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | GTGCTGGTGCCCGGCAGGATGTTGAGCTGCGTGAGCTGCGCGGCGTaGTCCTTAGCCTTGAGCCTCAGCGCGGCTATGCTTGACGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLVPGRMLSCVSCAA*SLALSLSAAMLDAR Trigger: ACGCGCGTCAAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTCAGCGCCGGGGCTCCTaGAGCAGCGCGCGGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTQRRGS*SSARAS Trigger: CGATGCCCGCGCGCTGCTCAAGGAGCCCCGGCGCTG...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCGTGCCCGGCAGGATGTaGAGCTGCGTGAGCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TALSASKLLRRRLRSVCAVPGRM*SCVSCA Trigger: CGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCAC...GGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | TCCTTCCCCGTGCTGGTGCCCGGCAGGATGTTGAGCTGCGTGAGCTaGGCGGCGTGCTCCTTAGCCTTGAGCCTCAGCGCGGCTATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFPVLVPGRMLSCVS*AACSLALSLSAAML Trigger: AAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCACGGGGAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCTTGGGAGTGAGCTGGGGCGCCTGGCTGATCTaGAGCGTGTCCCAGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KLLRRRLRSVCAFLGVSWGAWLI*SVSQAA Trigger: CGCTGCCTGGGACACGCTCAAGATCAGCCAGGCGCC...CCAGCTCACTCCCAAGAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | CCAGCGGGGCAGGCAAGCTCTGCGCGGCTCCCAGAAGCCTCATTTTaGATGGGCTTCTCCGGCCCAGGATGCTGTCGATGCAGTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGQASSARLPEASF*MGFSGPGCCRCSRR Trigger: CCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTTCTGGGAGCCGCGCAGAGCTTGCCTGCCCCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | CGGGGCAGGCAAGCTCTGCGCGGCTCCCAGAAGCCTCATTTTGCATaGGCTTCTCCGGCCCAGGATGCTGTCGATGCAGTAGGAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRQALRGSQKPHFA*ASPAQDAVDAVGGE Trigger: CTCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTTCTGGGAGCCGCGCAGAGCTTGCCTGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGGTGGACAGCCAGTGGAGGAGGTGCCACATCCTTTAGCGCCAAGAACTGCGTGCTCCTTAGCCTaGAGCCTCAGCGCGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: RAGGQPVEEVPHPLAPRTACSLA*SLSAAM Trigger: CATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGC...AGTTCTTGGCGCTAAAGGATGTGGCACCTCCTCCACTGGCTGTCCACCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | GCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCCTTCGTTGGAGATTTACTCTaGCACTCCGGCCTCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALSASKLLRRRLRSVCAFVGDLL*HSGLSE Trigger: CTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAAC...GAAGGCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS CCA 90 bp | TCTCCGGCCCAGGATGCTGTCGATGCAGTAGGAGGAGAGCAAAGTTaGAGATTTACTCTTGCACTCCGGCCTCTCAGAGCAGCCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPAQDAVDAVGGEQS*RFTLALRPLRAALF Trigger: GAAGAGGGCTGCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AACTGCCTTGTCCGCTTCCAAGCTGCTGCGAAGGCGGCTGCGCTCTGTCTGTGCAGGAGGAGAGCAAAGTaGGAGATTTACTCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NCLVRFQAAAKAAALCLCRRRAK*EIYSCT Trigger: AGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCT...GCACAGACAGAGCGCAGCCGCCTTCGCAGCAGCTTGGAAGCGGACAAGGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTCAGCGCCGGGGCTCCTaGAGCAGCGCGCGGGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGQRRGS*SSARAS Trigger: CGATGCCCGCGCGCTGCTCAAGGAGCCCCGGCGCTG...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | CGGCTCCCAGAAGCCTCATTTTGCATGGGCTTCTCCGGCCCAGGATaGTGTCGATGCAGTAGGAGGAGAGCAAAGTTGGAGATTTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPEASFCMGFSGPG*CRCSRRRAKLEIYS Trigger: AGAGTAAATCTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTTCTGGGAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGGGGGCGCTGCTGCTCTaGGGGGAGCCTTGCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFKCTVSYLTDSHSLPWGALLL*GEPCMA Trigger: AGCCATGCAAGGCTCCCCCAAGAGCAGCAGCGCCCC...CCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | GAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGTGCCCGGCAGGATGTaGAGCTGCGTGAGCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ENKNETPLSFKCTVSYLTVPGRM*SCVSCA Trigger: CGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCAC...TGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS GCA 90 bp | TGCTGTCGATGCAGTAGGAGGAGAGCAAAGTTGGAGATTTACTCTTaGACTCCGGCCTCTCAGAGCAGCCCTCTTCCTGGTACTGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCRCSRRRAKLEIYS*TPASQSSPLPGTDC Trigger: GCAATCAGTACCAGGAAGAGGGCTGCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATAGCAACAGCTCTTCCTaGGGCGACAGCTCCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NETPLSFKCTVSYLTDSHSNSSS*GDSSPP Trigger: GGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGCT...ATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | TTAGCCGGGCCGCGCTTAAATCAACATAGAGCGCCAAAATGCTATTCAAAAGAATCAGCGCGGCTATGCTaGACGCGCGTCTGTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAGPRLNQHRAPKCYSKESARLC*TRVCLP Trigger: CGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGA...TTCTTTTGAATAGCATTTTGGCGCTCTATGTTGATTTAAGCGCGGCCCGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | AATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTGCAATTGCGTTATAGGGGCGCTGCTGCTCTaGGGGGAGCCTTGCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLQEDKLLPYHAECNCVIGALLL*GEPCMA Trigger: AGCCATGCAAGGCTCCCCCAAGAGCAGCAGCGCCCC...TATAACGCAATTGCACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR CAA 90 bp | AACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATGCGTGCTCCTTAGCCTaGAGCCTCAGCGCGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: NETPLSFKCTVSYLTDSHACSLA*SLSAAM Trigger: CATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGC...ATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
||
| CDS-3UTR CAA 90 bp | ATTACACAAAAGTACTGTACCATTGCCTTTATCTTGAAGGTTTCCGAAGCCTCTGGCGCCTGGCTGATCTaGAGCGTGTCCCAGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ITQKYCTIAFILKVSEASGAWLI*SVSQAA Trigger: CGCTGCCTGGGACACGCTCAAGATCAGCCAGGCGCC...AGAGGCTTCGGAAACCTTCAAGATAAAGGCAATGGTACAGTACTTTTGTGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
||
| CDS-3UTR CAA 90 bp | TCACAGTTTGGTGACTTCAACAGTCCATATTCTAGCAGAGTATTTCCCTTTGGTAGCAACAGCTCTTCCTaGGGCGACAGCTCCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQFGDFNSPYSSRVFPFGSNSSS*GDSSPP Trigger: GGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGCT...ACCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CAA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTTCAGCGCGGCTATGCTaGACGCGCGTCTGTCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSSARLC*TRVCLP Trigger: CGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGA...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
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| CDS-3UTR CAA 90 bp | AGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGTTCTCGCGGTACGACTaGCTACGACTGATGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: RTRTRRPFPLSALLAILQFSRYD*LRLMLT Trigger: GGTGAGCATCAGTCGTAGCAAGTCGTACCGCGAGAA...CTGTAAGATAGCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CAA 90 bp | GATAAAGAAGAGAACAAGAACGAGACGCCCCTTTCCTTTAAGTGCACTGTTAGCTTCTCGCGGTACGACTaGCTACGACTGATGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: DKEENKNETPLSFKCTVSFSRYD*LRLMLT Trigger: GGTGAGCATCAGTCGTAGCAAGTCGTACCGCGAGAA...GCTAACAGTGCACTTAAAGGAAAGGGGCGTCTCGTTCTTGTTCTCTTCTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CAA 90 bp | TTAGCCGGGCCGCGCTTAAATCAACATAGAGCGCCAAAATGCTATTCAAAAGAAGTTGGAGATTTACTCTaGCACTCCGGCCTCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LAGPRLNQHRAPKCYSKEVGDLL*HSGLSE Trigger: CTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAAC...TTCTTTTGAATAGCATTTTGGCGCTCTATGTTGATTTAAGCGCGGCCCGGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS-3UTR CAA 90 bp | TACAACACAGTAAGAATCTACAGGAGGACAAACTTTTACCATACCACGCTGAGTGCTCTTGGGGGAGCCTaGCATGGCTTTTTCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: YNTVRIYRRTNFYHTTLSALGGA*HGFFLV Trigger: GACCAGGAAAAAGCCATGCAAGGCTCCCCCAAGAGC...ACTCAGCGTGGTATGGTAAAAGTTTGTCCTCCTGTAGATTCTTACTGTGTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046565.13 |
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| CDS-3UTR CAA 90 bp | CTTTCCTTTAAGTGCACTGTTAGCTATCTTACAGATTCGCATTCGCTTCCCTGGAGGAGGAGAGCAAAGTaGGAGATTTACTCTTGCACT | + |
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Preference number: 5 (lower is better) Translates to: LSFKCTVSYLTDSHSLPWRRRAK*EIYSCT Trigger: AGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCT...CCAGGGAAGCGAATGCGAATCTGTAAGATAGCTAACAGTGCACTTAAAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | GGCGGCCCCCGCCCGGGCCGTAGAGGCGCCGCAGCTTaGGTGGCAGGTGCAGCTCAGCCTCGAACGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GGPRPGRRGAAA*VAGAAQPRTGR Trigger: GCGCCCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCTACGGCCCGGGCGGGGGCCGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | ACAGCTCTTCCTTGGGCGACAGCTCCCCGCCCTCGGTaGCCACGGCGGCGGCAGCAGCGGCGGCGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TALPWATAPRPR*PRRRQQRRRRR Trigger: CCGCCGCCGCCGCCGCTGCTGCCGCCGCCGTGGCCACCGAGGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | CCTCCAACAGCTCCTCCTCGTCGTCCTCGGCGCCCGTaGCACCACCCGCCGCGGGGGCACTGCCGGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PPTAPPRRPRRP*HHPPRGHCRVR Trigger: GCGGACCCGGCAGTGCCCCCGCGGCGGGTGGTGGCACGGGCGCCGAGGACGACGAGGAGGAGCTGTTGGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CGGCTATGCTTGACGCGCGTCTGTCTGCCGCGGCGGTaGCCGGGTCGGCCAGCGCGCCCGAGGCCACTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RLCLTRVCLPRR*PGRPARPRPLR Trigger: GCGCAGTGGCCTCGGGCGCGCTGGCCGACCCGGCCACCGCCGCGGCAGACAGACGCGCGTCAAGCATAGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | TGGTGGTGGCGGTGGAGGAACCTCTCCACGGGGACCTaGGGTGCCAGTGGCCGTGGCCGCCGCTGCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: WWWRWRNLSTGT*GASGRGRRCGR Trigger: GCGGCCGCAGCGGCGGCCACGGCCACTGGCACCGCAGGTCCCCGTGGAGAGGTTCCTCCACCGCCACCACCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | GCCCCCGCCCGGGCCGTAGAGGCGCCGCAGCTTGGGTaGCAGGTGCAGCTCAGCCTCGAACGGGGCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: APARAVEAPQLG*QVQLSLERGAA Trigger: AGCAGCGCCCCGTTCGAGGCTGAGCTGCACCTGCCACCCAAGCTGCGGCGCCTCTACGGCCCGGGCGGGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 72 bp | GTGCCGGTGGTGGCCACCGAGCAGCGCCGGGGCTCCTaGAGCAGCGCGCGGGCATCGTCCTCCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPVVATEQRRGS*SSARASSSSSS Trigger: GGAGCTGCTGGAGGACGATGCCCGCGCGCTGCTCAAGGAGCCCCGGCGCTGCTCGGTGGCCACCACCGGCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 90 bp | GCGGCCACTGTGCCGGTGGTGGCCACCGAGCAGCGCCGGGGCTCCTaGAGCAGCGCGCGGGCATCGTCCTCCAGCAGCTCCTCGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: AATVPVVATEQRRGS*SSARASSSSSSSSS Trigger: CGACGACGAGGAGCTGCTGGAGGACGATGCCCGCGCGCTGCTCAAGGAGCCCCGGCGCTGCTCGGTGGCCACCACCGGCACAGTGGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CCTCGGCGTCCTCCGGGTGCAGCAACAGCTCTTCCTTaGGCGACAGCTCCCCGCCCTCGGTGGCCACGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PRRPPGAATALP*ATAPRPRWPRR Trigger: CCGCCGTGGCCACCGAGGGCGGGGAGCTGTCGCCCAAGGAAGAGCTGTTGCTGCACCCGGAGGACGCCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CCCTGCGCTGTCCTGACGCTCCCCTGGCCGTGCAGCTaGTGGTGGCGGTGGAGGAACCTCTCCACGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: PCAVLTLPWPCS*WWRWRNLSTGT Trigger: GGTCCCCGTGGAGAGGTTCCTCCACCGCCACCACCAGCTGCACGGCCAGGGGAGCGTCAGGACAGCGCAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CTGACGCTCCCCTGGCCGTGCAGCTGGTGGTGGCGGTaGAGGAACCTCTCCACGGGGACCTGCGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LTLPWPCSWWWR*RNLSTGTCGAS Trigger: ACTGGCACCGCAGGTCCCCGTGGAGAGGTTCCTCCACCGCCACCACCAGCTGCACGGCCAGGGGAGCGTCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 90 bp | GCTGGCGGCGGGGGCACGAAGGGCGCCCCGTTCTCGCGGTACGACTaGCTACGACTGATGCTCACCTGCGGCGCCTGGCTGATCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGGGGTKGAPFSRYD*LRLMLTCGAWLILS Trigger: GCTCAAGATCAGCCAGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGTACCGCGAGAACGGGGCGCCCTTCGTGCCCCCGCCGCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS TCA 72 bp | GTGCTCCTTAGCCTTGAGCCTCAGCGCGGCTATGCTTaGCGCGCGTCTGTCTGCCGCGGCGGTGGCCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VLLSLEPQRGYA*RASVCRGGGRV Trigger: GACCCGGCCACCGCCGCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | AGGCTGGGTGGCGGAACACCGCTGCTCCTAGAAAAGTaGTCAGACCCAGCGGCGCCCCGCTGGGTGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLGGGTPLLLEK*SDPAAPRWVAG Trigger: GCCTGCCACCCAGCGGGGCGCCGCTGGGTCTGAGCACTTTTCTAGGAGCAGCGGTGTTCCGCCACCCAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | GGGAGCCTTGCATGGCTTTTTCCTGGTCAGCGCGGCTaGCCAGCGGGGCAGGCAAGCTCTGCGCGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSLAWLFPGQRG*PAGQASSARLP Trigger: TGGGAGCCGCGCAGAGCTTGCCTGCCCCGCTGGCCAGCCGCGCTGACCAGGAAAAAGCCATGCAAGGCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 72 bp | GGGGGCACGAAGGGCGCCCCGTTCTCGCGGTACGACTaGCTACGACTGATGCTCACCTGCGGCGCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGTKGAPFSRYD*LRLMLTCGAWL Trigger: CAGCCAGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGTACCGCGAGAACGGGGCGCCCTTCGTGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 90 bp | TCCGAGTCGCTGCCGGCCGACAGGCACACGCTGTCCTCACCATCCTaGCCCTCGGCGTCCTCCGGGTGCAGCAACAGCTCTTCCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SESLPADRHTLSSPS*PSASSGCSNSSSLG Trigger: GCCCAAGGAAGAGCTGTTGCTGCACCCGGAGGACGCCGAGGGCAAGGATGGTGAGGACAGCGTGTGCCTGTCGGCCGGCAGCGACTCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | GTGCTGGTGCCCGGCAGGATGTTGAGCTGCGTGAGCTaGGCGGCGTGCTCCTTAGCCTTGAGCCTCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: VLVPGRMLSCVS*AACSLALSLSA Trigger: CGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 72 bp | CTGCCGGCCGACAGGCACACGCTGTCCTCACCATCCTaGCCCTCGGCGTCCTCCGGGTGCAGCAACAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPADRHTLSSPS*PSASSGCSNSS Trigger: AGAGCTGTTGCTGCACCCGGAGGACGCCGAGGGCAAGGATGGTGAGGACAGCGTGTGCCTGTCGGCCGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 72 bp | CACACCTCCTTCCCCGTGCTGGTGCCCGGCAGGATGTaGAGCTGCGTGAGCTGCGCGGCGTGCTCCTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: HTSFPVLVPGRM*SCVSCAACSLA Trigger: GGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCACGGGGAAGGAGGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 90 bp | GGCAGGATGTTGAGCTGCGTGAGCTGCGCGGCGTGCTCCTTAGCCTaGAGCCTCAGCGCGGCTATGCTTGACGCGCGTCTGTCTGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: GRMLSCVSCAACSLA*SLSAAMLDARLSAA Trigger: CGCGGCAGACAGACGCGCGTCAAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | TGGTCAGCGCGGCTGGCCAGCGGGGCAGGCAAGCTCTaGGCGGCTCCCAGAAGCCTCATTTTGCATGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: WSARLASGAGKL*AAPRSLILHGL Trigger: AAGCCCATGCAAAATGAGGCTTCTGGGAGCCGCGCAGAGCTTGCCTGCCCCGCTGGCCAGCCGCGCTGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | TCCTTCCCCGTGCTGGTGCCCGGCAGGATGTTGAGCTaGGTGAGCTGCGCGGCGTGCTCCTTAGCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFPVLVPGRMLS*VSCAACSLALS Trigger: GCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGGCACCAGCACGGGGAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | TCTGTTTGCGCTTCAGCAGCCCCTCCTCCGAGTCGCTaGCGGCCGACAGGCACACGCTGTCCTCACCATCCT | + |
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Preference number: 6 (lower is better) Translates to: SVCASAAPPPSR*RPTGTRCPHHP Trigger: AGGATGGTGAGGACAGCGTGTGCCTGTCGGCCGGCAGCGACTCGGAGGAGGGGCTGCTGAAGCGCAAACAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | CCCGGCAGGATGTTGAGCTGCGTGAGCTGCGCGGCGTaGTCCTTAGCCTTGAGCCTCAGCGCGGCTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: PGRMLSCVSCAA*SLALSLSAAML Trigger: AAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAACATCCTGCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 72 bp | TTGAGCTGCGTGAGCTGCGCGGCGTGCTCCTTAGCCTaGAGCCTCAGCGCGGCTATGCTTGACGCGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSCVSCAACSLA*SLSAAMLDARL Trigger: CAGACGCGCGTCAAGCATAGCCGCGCTGAGGCTCAAGGCTAAGGAGCACGCCGCGCAGCTCACGCAGCTCAA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | TACGACTTGCTACGACTGATGCTCACCTGCGGCGCCTaGCTGATCTTGAGCGTGTCCCAGGCAGCGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: YDLLRLMLTCGA*LILSVSQAAAA Trigger: TGCCGCCGCTGCCTGGGACACGCTCAAGATCAGCCAGGCGCCGCAGGTGAGCATCAGTCGTAGCAAGTCGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CAAGCTCTGCGCGGCTCCCAGAAGCCTCATTTTGCATaGGCTTCTCCGGCCCAGGATGCTGTCGATGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: QALRGSQKPHFA*ASPAQDAVDAV Trigger: TACTGCATCGACAGCATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTTCTGGGAGCCGCGCAGAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | AAGAGCCTGCCAAATGCTGGGCTGATGAAGGCTGGGTaGCGGAACACCGCTGCTCCTAGAAAAGTGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KSLPNAGLMKAG*RNTAAPRKVLR Trigger: TCTGAGCACTTTTCTAGGAGCAGCGGTGTTCCGCCACCCAGCCTTCATCAGCCCAGCATTTGGCAGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CAA 90 bp | TTCTCCGGCCCAGGATGCTGTCGATGCAGTAGGAGGAGAGCAAAGTaGGAGATTTACTCTTGCACTCCGGCCTCTCAGAGCAGCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FSGPGCCRCSRRRAK*EIYSCTPASQSSPL Trigger: AAGAGGGCTGCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS GCA 72 bp | GAAGCCTCATTTTGCATGGGCTTCTCCGGCCCAGGATaGTGTCGATGCAGTAGGAGGAGAGCAAAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: EASFCMGFSGPG*CRCSRRRAKLE Trigger: CTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCATCCTGGGCCGGAGAAGCCCATGCAAAATGAGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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| CDS CCA 72 bp | CAGGATGCTGTCGATGCAGTAGGAGGAGAGCAAAGTTaGAGATTTACTCTTGCACTCCGGCCTCTCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QDAVDAVGGEQS*RFTLALRPLRA Trigger: TGCTCTGAGAGGCCGGAGTGCAAGAGTAAATCTCCAACTTTGCTCTCCTCCTACTGCATCGACAGCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046565.13 ENSMUST00000113947.6 |
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