Pregenerated sensors for ARVCF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000118669Ensembl transcript IDs: ENSMUST00000239533.1, ENSMUST00000239534.1, ENSMUST00000239535.1, ENSMUST00000239536.1, ENSMUST00000239538.1, ENSMUST00000239547.1, ENSMUST00000239548.1, ENSMUST00000239551.1
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGCGCAGTGCCCCACAGGCCCGGCGCCGCACCTCAGCCCGAGGGTaGTCTAGTAATGCCACAAGCAGGGGGAGCCCACGCAGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LRSAPQARRRTSARG*SSNATSRGSPRSCR Trigger: GCGGCAGCTGCGTGGGCTCCCCCTGCTTGTGGCATTACTAGATCACCCTCGGGCTGAGGTGCGGCGCCGGGCCTGTGGGGCACTGCGCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | CCCGGATGGCGGCCTTGTTGTCAGTATCCCGGCCATAGGAGAGGTTaGGCAGTGCCCCACAGGCCCGGCGCCGCACCTCAGCCCGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PGWRPCCQYPGHRRG*AVPHRPGAAPQPEG Trigger: ACCCTCGGGCTGAGGTGCGGCGCCGGGCCTGTGGGGCACTGCGCAACCTCTCCTATGGCCGGGATACTGACAACAAGGCCGCCATCCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | CCCGCAGTAGGCGCACCAGGGCTGGCACGCCCCCGCAGTCCCGGATaGCGGCCTTGTTGTCAGTATCCCGGCCATAGGAGAGGTTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: PAVGAPGLARPRSPG*RPCCQYPGHRRGCA Trigger: TGCGCAACCTCTCCTATGGCCGGGATACTGACAACAAGGCCGCCATCCGGGACTGCGGGGGCGTGCCAGCCCTGGTGCGCCTACTGCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | CCATTGGCAGGGGCTGCCCACTGCCCACCATACCACCACTGCTCATaGCAGGCTGCTGGGCACGCTCCAGCTGCAGGGCAACATGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PLAGAAHCPPYHHCS*QAAGHAPAAGQHGA Trigger: GGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAGTGGTGGTATGGTGGGCAGTGGGCAGCCCCTGCCAATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CCA 90 bp | TCCTCCAGTACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATGCCTaGCTACCCGGGCTCTGCTCCTGCAGAACCAGCTGCTGCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSSTSGASGIVASDA*LPGLCSCRTSCCQA Trigger: GGCCTGGCAGCAGCTGGTTCTGCAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 90 bp | CCTGCAGAACCAGCTGCTGCCAGGCCATTGGCAGGGGCTGCCCACTaGCCACCATACCACCACTGCTCATGCCAGGCTGCTGGGCACGCT | + |
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Preference number: 5 (lower is better) Translates to: PAEPAAARPLAGAAH*PPYHHCSCQAAGHA Trigger: AGCGTGCCCAGCAGCCTGGCATGAGCAGTGGTGGTATGGTGGGCAGTGGGCAGCCCCTGCCAATGGCCTGGCAGCAGCTGGTTCTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 90 bp | GGGTGCTATCCACTGAAGGTGAGCGCCGCACTACTCGGTCCAAGCTaGCCAGGCTGCCCCTCTCAGGCTGGGCCAGAGGGGCTGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GCYPLKVSAALLGPS*PGCPSQAGPEGLLL Trigger: CAGCAACAGCCCCTCTGGCCCAGCCTGAGAGGGGCAGCCTGGGCAGCTTGGACCGAGTAGTGCGGCGCTCACCTTCAGTGGATAGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | ACACCTCTGGCAGCTCGGGGTCCCGCCAGCGTGGCTCCTTGCGGGTaGTATCCACTGAAGGTGAGCGCCGCACTACTCGGTCCAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TPLAARGPASVAPCG*YPLKVSAALLGPSC Trigger: GCAGCTTGGACCGAGTAGTGCGGCGCTCACCTTCAGTGGATAGCACCCGCAAGGAGCCACGCTGGCGGGACCCCGAGCTGCCAGAGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | AGGGGCTGCCCACTGCCCACCATACCACCACTGCTCATGCCAGGCTaGTGGGCACGCTCCAGCTGCAGGGCAACATGGCGCCGTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RGCPLPTIPPLLMPG*WARSSCRATWRRSC Trigger: ACAAGAACGGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAGTGGTGGTATGGTGGGCAGTGGGCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 90 bp | CTCTGCTCCTGCAGAACCAGCTGCTGCCAGGCCATTGGCAGGGGCTaGCCACTGCCCACCATACCACCACTGCTCATGCCAGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LCSCRTSCCQAIGRG*PLPTIPPLLMPGCW Trigger: CCAGCAGCCTGGCATGAGCAGTGGTGGTATGGTGGGCAGTGGGCAGCCCCTGCCAATGGCCTGGCAGCAGCTGGTTCTGCAGGAGCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 90 bp | TGTCTCCTCCAGTACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATaGCTGGCTACCCGGGCTCTGCTCCTGCAGAACCAGCTGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CLLQYLGCLWHRGQR*LATRALLLQNQLLP Trigger: TGGCAGCAGCTGGTTCTGCAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTGGAGGAGACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 90 bp | CCACTGAAGGTGAGCGCCGCACTACTCGGTCCAAGCTGCCCAGGCTaGCCCTCTCAGGCTGGGCCAGAGGGGCTGTTGCTGCTGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: PLKVSAALLGPSCPG*PSQAGPEGLLLLEM Trigger: CATTTCCAGCAGCAACAGCCCCTCTGGCCCAGCCTGAGAGGGGCAGCCTGGGCAGCTTGGACCGAGTAGTGCGGCGCTCACCTTCAGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | TGTCTCCTCCAGTACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATaGCTGGCTACCCGGGCTCTGCTCCTGTCTGAGTTCGGCCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: CLLQYLGCLWHRGQR*LATRALLLSEFGRH Trigger: ATGCCGGCCGAACTCAGACAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTGGAGGAGACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 90 bp | CGGATTCAGAGCCCATGGGGAAGGCTTCTCGGCGGCCAGGCAGTGTaGAACAGCCATCACCAGGTCCTGGGCCCAGGAGGCCAGTACGTG | + |
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Preference number: 5 (lower is better) Translates to: RIQSPWGRLLGGQAV*NSHHQVLGPGGQYV Trigger: CACGTACTGGCCTCCTGGGCCCAGGACCTGGTGATGGCTGTTTCACACTGCCTGGCCGCCGAGAAGCCTTCCCCATGGGCTCTGAATCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | GGAGGCCAGTACGTGGTGGCCGTACCCCGAGCCCTCGGGACAAGCTaGCATAGCTTGGAATATCACGGGACTCGGGGCCATCGGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: GGQYVVAVPRALGTS*HSLEYHGTRGHRES Trigger: GCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGCCACCACGTACTGGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | CTGCTCATGCCAGGCTGCTGGGCACGCTCCAGCTGCAGGGCAACATaGCGCCGTTCTTGTTCTAGTGCCCGTGTCAGCCGCTCGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: LLMPGCWARSSCRAT*RRSCSSARVSRSKR Trigger: CCGTTTCGAGCGGCTGACACGGGCACTAGAACAAGAACGGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CCA 90 bp | TCTGTAGCACGTGTGATGCTGCCTTGGCCTCCCGCACTGACTGGCTaGAGGCCACAAGTGCTACCAGGGCAGGCACACCACGGGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SVARVMLPWPPALTG*RPQVLPGQAHHGPA Trigger: TGCAGGCCCGTGGTGTGCCTGCCCTGGTAGCACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACGTGCTACAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | ACAGTCTGTAGCACGTGTGATGCTGCCTTGGCCTCCCGCACTGACTaGCTGGAGGCCACAAGTGCTACCAGGGCAGGCACACCACGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TVCSTCDAALASRTD*LEATSATRAGTPRA Trigger: GGCCCGTGGTGTGCCTGCCCTGGTAGCACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACGTGCTACAGACTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | ACGTGGTGGCCGTACCCCGAGCCCTCGGGACAAGCTGCCATAGCTTaGAATATCACGGGACTCGGGGCCATCGGGAAAGCCACCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: TWWPYPEPSGQAAIA*NITGLGAIGKATST Trigger: AGTGGAGGTGGCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGCCACCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | GAAACAGCCATCACCAGGTCCTGGGCCCAGGAGGCCAGTACGTGGTaGCCGTACCCCGAGCCCTCGGGACAAGCTGCCATAGCTTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ETAITRSWAQEASTW*PYPEPSGQAAIAWN Trigger: ATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGCCACCACGTACTGGCCTCCTGGGCCCAGGACCTGGTGATGGCTGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | ACCATACCACCACTGCTCATGCCAGGCTGCTGGGCACGCTCCAGCTaGAGGGCAACATGGCGCCGTTCTTGTTCTAGTGCCCGTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TIPPLLMPGCWARSS*RATWRRSCSSARVS Trigger: GCTGACACGGGCACTAGAACAAGAACGGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAGTGGTGGTATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CCA 90 bp | GCCATATGGTTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCCGCTTaGTGGTCCGGATTCAGAGCCCATGGGGAAGGCTTCTCGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: AIWFSLEMLRQRAAA*WSGFRAHGEGFSAA Trigger: GGCCGCCGAGAAGCCTTCCCCATGGGCTCTGAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | TTGGAATATCACGGGACTCGGGGCCATCGGGAAAGCCACCTCCACTaGTGTGGTAGGTTCGGGAGAGTGTGGCTGCTGGACCACCACCAC | + |
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Preference number: 5 (lower is better) Translates to: LEYHGTRGHRESHLH*CGRFGRVWLLDHHH Trigger: GTGGTGGTGGTCCAGCAGCCACACTCTCCCGAACCTACCACAGCAGTGGAGGTGGCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | ATATGGTTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCCGCTTGGTaGTCCGGATTCAGAGCCCATGGGGAAGGCTTCTCGGCGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IWFSLEMLRQRAAAW*SGFRAHGEGFSAAR Trigger: CCTGGCCGCCGAGAAGCCTTCCCCATGGGCTCTGAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | TCTCAGACTGTAGCAGTTCCACCAGTACTGGCAGCCCACGTTCCTTaGGCACTGTGGCACGGATGTACGTGGCCCACGTCCAGTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SQTVAVPPVLAAHVP*ALWHGCTWPTSSCQ Trigger: CTGGCAACTGGACGTGGGCCACGTACATCCGTGCCACAGTGCGCAAGGAACGTGGGCTGCCAGTACTGGTGGAACTGCTACAGTCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | CATCGGGAAAGCCACCTCCACTGCTGTGGTAGGTTCGGGAGAGTGTaGCTGCTGGACCACCACCACCACGAAGTAGGTAATGCCGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HRESHLHCCGRFGRV*LLDHHHHEVGNAGP Trigger: TGGACCGGCATTACCTACTTCGTGGTGGTGGTGGTCCAGCAGCCACACTCTCCCGAACCTACCACAGCAGTGGAGGTGGCTTTCCCGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | GCTCCTTGTAGCTCCATACAGTCTGTAGCACGTGTGATGCTGCCTTaGCCTCCCGCACTGACTGGCTGGAGGCCACAAGTGCTACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: APCSSIQSVARVMLP*PPALTGWRPQVLPG Trigger: CCCTGGTAGCACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACGTGCTACAGACTGTATGGAGCTACAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CCA 90 bp | CCAGAACTTGGTGTCCCTTTGGGTCCTTTGGCAGTGCTAGCAGACTaGAAGCGTGACTTCGTCCAGCCATCCCTCTGCAGGGCTCCACGC | + |
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Preference number: 5 (lower is better) Translates to: PELGVPLGPLAVLAD*KRDFVQPSLCRAPR Trigger: GCGTGGAGCCCTGCAGAGGGATGGCTGGACGAAGTCACGCTTCCAGTCTGCTAGCACTGCCAAAGGACCCAAAGGGACACCAAGTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS TCA 90 bp | GGCTGCAGCTTCCAGGGTGTTGAAGTTCCGGCTCTCCGTAAGGAGTaGGAGGTAGAGACGTACCACCTCCGGCTGGTACAGCAGCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: GCSFQGVEVPALRKE*EVETYHLRLVQQLE Trigger: TTCGAGCTGCTGTACCAGCCGGAGGTGGTACGTCTCTACCTCTCACTCCTTACGGAGAGCCGGAACTTCAACACCCTGGAAGCTGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 90 bp | AGCGAGCATTGTCCAGGCTGTCGGACACGATCTCATGGATGGTGTTaGGCACGGCAACCACAGTATCCTCCTCCAGGTGGGCACTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SEHCPGCRTRSHGWC*ARQPQYPPPGGHWG Trigger: ACCCCAGTGCCCACCTGGAGGAGGATACTGTGGTTGCCGTGCTCAACACCATCCATGAGATCGTGTCCGACAGCCTGGACAATGCTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | TGCTGGAAATGGGGGACGCTCTTCTATCAGCTCACCAGCATCATCTaGTGTGTCTTCAAAGGCCCTGGCACGAAGGCCCCGCCCGTACTC | + |
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Preference number: 5 (lower is better) Translates to: CWKWGTLFYQLTSII*CVFKGPGTKAPPVL Trigger: GAGTACGGGCGGGGCCTTCGTGCCAGGGCCTTTGAAGACACAGCAGATGATGCTGGTGAGCTGATAGAAGAGCGTCCCCCATTTCCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | CTTGATGGAACCACTCCTCTTTTGCTTTCTTGCCACCAAAGCAGCTaGCGTCATCCTTCCTCCGTCGCTGGGAGGTTGTGCTGCCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: LDGTTPLLLSCHQSS*RHPSSVAGRLCCPG Trigger: TCCCGGGCAGCACAACCTCCCAGCGACGGAGGAAGGATGACGCCAGCTGCTTTGGTGGCAAGAAAGCAAAAGAGGAGTGGTTCCATCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | TCGTTAGGCTCTCGCTCCCAGCCGGAATGGGGCACGATGACCTCATaGGTCAGAGTCTGTAAGCCGTGGTCAATGATGACCATCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLGSRSQPEWGTMTS*VRVCKPWSMMTIFR Trigger: CCTGAAGATGGTCATCATTGACCACGGCTTACAGACTCTGACCCATGAGGTCATCGTGCCCCATTCCGGCTGGGAGCGAGAGCCTAACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 90 bp | CCCTCCGGTCAACTGTGGCGTAACCATCTGGACCAAGGGTATCCATaGGGATCACATCCCGGGTGTTTGACTTCTCCCCATCAAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PSGQLWRNHLDQGYP*GSHPGCLTSPHQGS Trigger: AGAGCCTTGATGGGGAGAAGTCAAACACCCGGGATGTGATCCCCATGGATACCCTTGGTCCAGATGGTTACGCCACAGTTGACCGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS TCA 90 bp | CTGCACCATCTGAGCTCACATTCCTCAGGCAGCCTGATGTGTTCTTaGAGACTGTTGTCCACTCGGCATCCCGGGGCTTCGAGTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: LHHLSSHSSGSLMCS*RLLSTRHPGASSLR Trigger: ACGAAGACTCGAAGCCCCGGGATGCCGAGTGGACAACAGTCTTCAAGAACACATCAGGCTGCCTGAGGAATGTGAGCTCAGATGGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 90 bp | CATTGCGAACATTCCGAACCAGCTCTGTCATGGCATAGCTCCCGATaGGGTCTTTGTTCCGCTGGTCTAGTGAGAGGTTGCGCAGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: HCEHSEPALSWHSSR*GLCSAGLVRGCAAR Trigger: TCGCGCTGCGCAACCTCTCACTAGACCAGCGGAACAAAGACCTCATCGGGAGCTATGCCATGACAGAGCTGGTTCGGAATGTTCGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | GTCCATCTCTGCATCCTTCTTCCCTTGATGGAACCACTCCTCTTTTaGTTTCTTGCCACCAAAGCAGCTGGCGTCATCCTTCCTCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: VHLCILLPLMEPLLF*FLATKAAGVILPPS Trigger: CGACGGAGGAAGGATGACGCCAGCTGCTTTGGTGGCAAGAAAGCAAAAGAGGAGTGGTTCCATCAAGGGAAGAAGGATGCAGAGATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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| CDS GCA 90 bp | TGTTTGACTTCTCCCCATCAAGGCTCTTGTCTACCAGTGGCAGTGTaGTGTCATCAAAGCCGCCAGAACTTGGTGTCCCTTTGGGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CLTSPHQGSCLPVAV*CHQSRQNLVSLWVL Trigger: AAGGACCCAAAGGGACACCAAGTTCTGGCGGCTTTGATGACAGCACACTGCCACTGGTAGACAAGAGCCTTGATGGGGAGAAGTCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS GCA 90 bp | CGTTCGTTTAGGCAGGTCCAGTGTGTCAAAGTTCCGGTCCATCTCTaGATCCTTCTTCCCTTGATGGAACCACTCCTCTTTTGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSFRQVQCVKVPVHL*ILLPLMEPLLFCFL Trigger: AAGAAAGCAAAAGAGGAGTGGTTCCATCAAGGGAAGAAGGATGCAGAGATGGACCGGAACTTTGACACACTGGACCTGCCTAAACGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | GCCCCACAGGCCCGGCGCCGCACCTCAGCCCGAGGGTaGTCTAGTAATGCCACAAGCAGGGGGAGCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: APQARRRTSARG*SSNATSRGSPR Trigger: GCGTGGGCTCCCCCTGCTTGTGGCATTACTAGATCACCCTCGGGCTGAGGTGCGGCGCCGGGCCTGTGGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | AGGGTCCACAGGGTGCCGCAGCATGGCCAACACCTCTaGCAGCTCGGGGTCCCGCCAGCGTGGCTCCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: RVHRVPQHGQHL*QLGVPPAWLLA Trigger: CGCAAGGAGCCACGCTGGCGGGACCCCGAGCTGCCAGAGGTGTTGGCCATGCTGCGGCACCCTGTGGACCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | GTGAGCGCCGCACTACTCGGTCCAAGCTGCCCAGGCTaGCCCTCTCAGGCTGGGCCAGAGGGGCTGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSAALLGPSCPG*PSQAGPEGLLL Trigger: CAGCAACAGCCCCTCTGGCCCAGCCTGAGAGGGGCAGCCTGGGCAGCTTGGACCGAGTAGTGCGGCGCTCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CCACTGAAGGTGAGCGCCGCACTACTCGGTCCAAGCTaGCCAGGCTGCCCCTCTCAGGCTGGGCCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PLKVSAALLGPS*PGCPSQAGPEG Trigger: CCCCTCTGGCCCAGCCTGAGAGGGGCAGCCTGGGCAGCTTGGACCGAGTAGTGCGGCGCTCACCTTCAGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | GTTGTCAGTATCCCGGCCATAGGAGAGGTTGCGCAGTaGCCCACAGGCCCGGCGCCGCACCTCAGCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: VVSIPAIGEVAQ*PTGPAPHLSPR Trigger: CCTCGGGCTGAGGTGCGGCGCCGGGCCTGTGGGGCACTGCGCAACCTCTCCTATGGCCGGGATACTGACAAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | GGCGCACCAGGGCTGGCACGCCCCCGCAGTCCCGGATaGCGGCCTTGTTGTCAGTATCCCGGCCATAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GAPGLARPRSPG*RPCCQYPGHRR Trigger: TCTCCTATGGCCGGGATACTGACAACAAGGCCGCCATCCGGGACTGCGGGGGCGTGCCAGCCCTGGTGCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | GGGGCTGCCCACTGCCCACCATACCACCACTGCTCATaGCAGGCTGCTGGGCACGCTCCAGCTGCAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GAAHCPPYHHCS*QAAGHAPAAGQ Trigger: TTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAGTGGTGGTATGGTGGGCAGTGGGCAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 72 bp | GCAGCTCGGGGTCCCGCCAGCGTGGCTCCTTGCGGGTaGTATCCACTGAAGGTGAGCGCCGCACTACTCGGT | + |
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Preference number: 6 (lower is better) Translates to: AARGPASVAPCG*YPLKVSAALLG Trigger: ACCGAGTAGTGCGGCGCTCACCTTCAGTGGATAGCACCCGCAAGGAGCCACGCTGGCGGGACCCCGAGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CCTCTGGCAGCTCGGGGTCCCGCCAGCGTGGCTCCTTaGGGGTGCTATCCACTGAAGGTGAGCGCCGCACTA | + |
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Preference number: 6 (lower is better) Translates to: PLAARGPASVAP*GCYPLKVSAAL Trigger: TAGTGCGGCGCTCACCTTCAGTGGATAGCACCCGCAAGGAGCCACGCTGGCGGGACCCCGAGCTGCCAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | ACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATGCCTaGCTACCCGGGCTCTGCTCCTGCAGAACCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSGASGIVASDA*LPGLCSCRTSC Trigger: GCAGCTGGTTCTGCAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CCA 72 bp | ACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATGCCTaGCTACCCGGGCTCTGCTCCTGTCTGAGTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSGASGIVASDA*LPGLCSCLSSA Trigger: GGCCGAACTCAGACAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | ACCTCTGGCAGCTCGGGGTCCCGCCAGCGTGGCTCCTaGCGGGTGCTATCCACTGAAGGTGAGCGCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: TSGSSGSRQRGS*RVLSTEGERRT Trigger: AGTGCGGCGCTCACCTTCAGTGGATAGCACCCGCAAGGAGCCACGCTGGCGGGACCCCGAGCTGCCAGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | GATGACAGGTTCCAGAGTGTGCCAGTGACCAGCTCACGGACCTCATaGTCACGGGCCGCCCGCAGTAGGCGCACCAGGGCTGGCACGCCC | + |
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Preference number: 6 (lower is better) Translates to: DDRFQSVPVTSSRTS*SRAARSRRTRAGTP Trigger: GGGCGTGCCAGCCCTGGTGCGCCTACTGCGGGCGGCCCGTGACAATGAGGTCCGTGAGCTGGTCACTGGCACACTCTGGAACCTGTCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CAGTACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATaGCTGGCTACCCGGGCTCTGCTCCTGCAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: QYLGCLWHRGQR*LATRALLLQNQ Trigger: CTGGTTCTGCAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS GCA 72 bp | ACGAAGGCCCCGCCCGTACTCAGGTCTTCTCCGGGTTaGCGTGCTATAGTCAGGCTCCAGGTCGGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TKAPPVLRSSPG*RAIVRLQVGAT Trigger: GGTGGCCCCGACCTGGAGCCTGACTATAGCACGGCAACCCGGAGAAGACCTGAGTACGGGCGGGGCCTTCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CCAGGCTGCTGGGCACGCTCCAGCTGCAGGGCAACATaGCGCCGTTCTTGTTCTAGTGCCCGTGTCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGCWARSSCRAT*RRSCSSARVSR Trigger: GCGGCTGACACGGGCACTAGAACAAGAACGGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CAA 72 bp | CACGAAGGCCCCGCCCGTACTCAGGTCTTCTCCGGGTaGCCGTGCTATAGTCAGGCTCCAGGTCGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HEGPARTQVFSG*PCYSQAPGRGH Trigger: GTGGCCCCGACCTGGAGCCTGACTATAGCACGGCAACCCGGAGAAGACCTGAGTACGGGCGGGGCCTTCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CACGGGACTCGGGGCCATCGGGAAAGCCACCTCCACTaGTGTGGTAGGTTCGGGAGAGTGTGGCTGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: HGTRGHRESHLH*CGRFGRVWLLD Trigger: GTCCAGCAGCCACACTCTCCCGAACCTACCACAGCAGTGGAGGTGGCTTTCCCGATGGCCCCGAGTCCCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TGGCGTCATCCTTCCTCCGTCGCTGGGAGGTTGTGCTaGCCGGGATCCCAGGCTCTGCCTCCTGGTACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WRHPSSVAGRLC*PGSQALPPGTC Trigger: ACAGGTACCAGGAGGCAGAGCCTGGGATCCCGGGCAGCACAACCTCCCAGCGACGGAGGAAGGATGACGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CAGTACCTCGGGTGCCTCTGGCATCGTGGCCAGCGATaGCTGGCTACCCGGGCTCTGCTCCTGTCTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QYLGCLWHRGQR*LATRALLLSEF Trigger: GAACTCAGACAGGAGCAGAGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CACAGTCACTGTCTCCTCCAGTACCTCGGGTGCCTCTaGCATCGTGGCCAGCGATGCCTGGCTACCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HSHCLLQYLGCL*HRGQRCLATRA Trigger: AGCCCGGGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTGGAGGAGACAGTGACTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CGTGTGATGCTGCCTTGGCCTCCCGCACTGACTGGCTaGAGGCCACAAGTGCTACCAGGGCAGGCACACCAC | + |
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Preference number: 6 (lower is better) Translates to: RVMLPWPPALTG*RPQVLPGQAHH Trigger: GTGGTGTGCCTGCCCTGGTAGCACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | TTCCAGAGTGTGCCAGTGACCAGCTCACGGACCTCATaGTCACGGGCCGCCCGCAGTAGGCGCACCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: FQSVPVTSSRTS*SRAARSRRTRA Trigger: AGCCCTGGTGCGCCTACTGCGGGCGGCCCGTGACAATGAGGTCCGTGAGCTGGTCACTGGCACACTCTGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | CACGGATGTACGTGGCCCACGTCCAGTTGCCAGCACTaGGGTTTTGCAGGGCACCGGCTGCAGCTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HGCTWPTSSCQH*GFAGHRLQLPG Trigger: CCCTGGAAGCTGCAGCCGGTGCCCTGCAAAACCTCAGTGCTGGCAACTGGACGTGGGCCACGTACATCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CCACTGCTCATGCCAGGCTGCTGGGCACGCTCCAGCTaGAGGGCAACATGGCGCCGTTCTTGTTCTAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PLLMPGCWARSS*RATWRRSCSSA Trigger: GGCACTAGAACAAGAACGGCGCCATGTTGCCCTGCAGCTGGAGCGTGCCCAGCAGCCTGGCATGAGCAGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 |
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| CDS CCA 72 bp | AAGTGGAGGGCCGCCGTCCAGCAAGGGGAGTCCATCTaGGCCCAAAGGCACCTGGCGTACTGTCCTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: KWRAAVQQGESI*AQRHLAYCPCG Trigger: ACCACAAGGACAGTACGCCAGGTGCCTTTGGGCCCAGATGGACTCCCCTTGCTGGACGGCGGCCCTCCACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CCGTACCCCGAGCCCTCGGGACAAGCTGCCATAGCTTaGAATATCACGGGACTCGGGGCCATCGGGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PYPEPSGQAAIA*NITGLGAIGKA Trigger: GGCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CCACCAGTACTGGCAGCCCACGTTCCTTGCGCACTGTaGCACGGATGTACGTGGCCCACGTCCAGTTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPVLAAHVPCAL*HGCTWPTSSCQ Trigger: CTGGCAACTGGACGTGGGCCACGTACATCCGTGCCACAGTGCGCAAGGAACGTGGGCTGCCAGTACTGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | AGCACGTGTGATGCTGCCTTGGCCTCCCGCACTGACTaGCTGGAGGCCACAAGTGCTACCAGGGCAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: STCDAALASRTD*LEATSATRAGT Trigger: TGTGCCTGCCCTGGTAGCACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | GCCGTACCCCGAGCCCTCGGGACAAGCTGCCATAGCTaGGAATATCACGGGACTCGGGGCCATCGGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVPRALGTSCHS*EYHGTRGHRES Trigger: GCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | TACGTGGTGGCCGTACCCCGAGCCCTCGGGACAAGCTGCCATAGCTaGGAATATCACGGGACTCGGGGCCATCGGGAAAGCCACCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: YVVAVPRALGTSCHS*EYHGTRGHRESHLH Trigger: GTGGAGGTGGCTTTCCCGATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGCCACCACGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | GCTACCAGGGCAGGCACACCACGGGCCTGCAGGAGGGAGCGAGCATaGTCCAGGCTGTCGGACACGATCTCATGGATGGTGTTGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: ATRAGTPRACRRERA*SRLSDTISWMVLST Trigger: CGTGCTCAACACCATCCATGAGATCGTGTCCGACAGCCTGGACAATGCTCGCTCCCTCCTGCAGGCCCGTGGTGTGCCTGCCCTGGTAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | GGCCATATGGTTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCCGCTaGGTGGTCCGGATTCAGAGCCCATGGGGAAGGCTTCTCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHMVQLGNAQAESGR*VVRIQSPWGRLLGG Trigger: GCCGCCGAGAAGCCTTCCCCATGGGCTCTGAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TTCCTCCACAGTCACTGTCTCCTCCAGTACCTCGGGTaGCTCTGGCATCGTGGCCAGCGATGCCTGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: FLHSHCLLQYLG*LWHRGQRCLAT Trigger: GGTAGCCAGGCATCGCTGGCCACGATGCCAGAGGCACCCGAGGTACTGGAGGAGACAGTGACTGTGGAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TACGTGGTGGCCGTACCCCGAGCCCTCGGGACAAGCTaGCATAGCTTGGAATATCACGGGACTCGGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YVVAVPRALGTS*HSLEYHGTRGH Trigger: ATGGCCCCGAGTCCCGTGATATTCCAAGCTATGGCAGCTTGTCCCGAGGGCTCGGGGTACGGCCACCACGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | GTAGCAGTTCCACCAGTACTGGCAGCCCACGTTCCTTaGGCACTGTGGCACGGATGTACGTGGCCCACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAVPPVLAAHVP*ALWHGCTWPTS Trigger: GGACGTGGGCCACGTACATCCGTGCCACAGTGCGCAAGGAACGTGGGCTGCCAGTACTGGTGGAACTGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | GCACGGCAACCACAGTATCCTCCTCCAGGTGGGCACTaGGGTGAGCGGGAGCCTGTGCATTGCGAACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARQPQYPPPGGH*GEREPVHCEHS Trigger: GGAATGTTCGCAATGCACAGGCTCCCGCTCACCCCAGTGCCCACCTGGAGGAGGATACTGTGGTTGCCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CCAGGTGGGCACTGGGGTGAGCGGGAGCCTGTGCATTaGGAACATTCCGAACCAGCTCTGTCATGGCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGHWGEREPVH*EHSEPALSWHS Trigger: GCTATGCCATGACAGAGCTGGTTCGGAATGTTCGCAATGCACAGGCTCCCGCTCACCCCAGTGCCCACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | TGTTCCGCTGGTCTAGTGAGAGGTTGCGCAGCGCGATaGCTACAGCGCGCACCACCTTGTCGGTCTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: CSAGLVRGCAAR*LQRAPPCRSQT Trigger: AGTCTGAGACCGACAAGGTGGTGCGCGCTGTAGCCATCGCGCTGCGCAACCTCTCACTAGACCAGCGGAACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | TGTAGCAGTTCCACCAGTACTGGCAGCCCACGTTCCTaGCGCACTGTGGCACGGATGTACGTGGCCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSTSTGSPRS*RTVARMYVAHV Trigger: GACGTGGGCCACGTACATCCGTGCCACAGTGCGCAAGGAACGTGGGCTGCCAGTACTGGTGGAACTGCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | CCGATGAGGTCTTTGTTCCGCTGGTCTAGTGAGAGGTaGCGCAGCGCGATGGCTACAGCGCGCACCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PMRSLFRWSSER*RSAMATARTTL Trigger: CAAGGTGGTGCGCGCTGTAGCCATCGCGCTGCGCAACCTCTCACTAGACCAGCGGAACAAAGACCTCATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | CGCAGCCAGGCTCCGTGTATCATCCTCCAGGCCATATGGTTCAGCTaGGAAATGCTCAGGCAGAGAGCGGCCGCTTGGTGGTCCGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: RSQAPCIILQAIWFS*EMLRQRAAAWWSGF Trigger: GAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATATGGCCTGGAGGATGATACACGGAGCCTGGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | GTCTCAGACTGTAGCAGTTCCACCAGTACTGGCAGCCCACGTTCCTaGCGCACTGTGGCACGGATGTACGTGGCCCACGTCCAGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSDCSSSTSTGSPRS*RTVARMYVAHVQLP Trigger: TGGCAACTGGACGTGGGCCACGTACATCCGTGCCACAGTGCGCAAGGAACGTGGGCTGCCAGTACTGGTGGAACTGCTACAGTCTGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | TCTAGTGAGAGGTTGCGCAGCGCGATGGCTACAGCGCGCACCACCTaGTCGGTCTCAGACTGTAGCAGTTCCACCAGTACTGGCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSERLRSAMATARTT*SVSDCSSSTSTGSP Trigger: TGGGCTGCCAGTACTGGTGGAACTGCTACAGTCTGAGACCGACAAGGTGGTGCGCGCTGTAGCCATCGCGCTGCGCAACCTCTCACTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | GAGCGAGCATTGTCCAGGCTGTCGGACACGATCTCATGGATGGTGTaGAGCACGGCAACCACAGTATCCTCCTCCAGGTGGGCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERALSRLSDTISWMV*STATTVSSSRWALG Trigger: CCCCAGTGCCCACCTGGAGGAGGATACTGTGGTTGCCGTGCTCAACACCATCCATGAGATCGTGTCCGACAGCCTGGACAATGCTCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | TTTGGGTCCTTTGGCAGTGCTAGCAGACTGGAAGCGTaGCTTCGTCCAGCCATCCCTCTGCAGGGCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FGSFGSASRLEA*LRPAIPLQGST Trigger: CGTGGAGCCCTGCAGAGGGATGGCTGGACGAAGTCACGCTTCCAGTCTGCTAGCACTGCCAAAGGACCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS GCA 72 bp | TGGGGGACGCTCTTCTATCAGCTCACCAGCATCATCTaGTGTGTCTTCAAAGGCCCTGGCACGAAGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: WGTLFYQLTSII*CVFKGPGTKAP Trigger: CGGGGCCTTCGTGCCAGGGCCTTTGAAGACACAGCAGATGATGCTGGTGAGCTGATAGAAGAGCGTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | TTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCCGCTTaGTGGTCCGGATTCAGAGCCCATGGGGAAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLEMLRQRAAA*WSGFRAHGEGF Trigger: GAAGCCTTCCCCATGGGCTCTGAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CGCAGCCAGGCTCCGTGTATCATCCTCCAGGCCATATaGTTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSQAPCIILQAI*FSLEMLRQRAA Trigger: GGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATATGGCCTGGAGGATGATACACGGAGCCTGGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | AGCTCCATACAGTCTGTAGCACGTGTGATGCTGCCTTaGCCTCCCGCACTGACTGGCTGGAGGCCACAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSIQSVARVMLP*PPALTGWRPQV Trigger: CACTTGTGGCCTCCAGCCAGTCAGTGCGGGAGGCCAAGGCAGCATCACACGTGCTACAGACTGTATGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CCA 72 bp | GGTGTCCCTTTGGGTCCTTTGGCAGTGCTAGCAGACTaGAAGCGTGACTTCGTCCAGCCATCCCTCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVPLGPLAVLAD*KRDFVQPSLCR Trigger: CCTGCAGAGGGATGGCTGGACGAAGTCACGCTTCCAGTCTGCTAGCACTGCCAAAGGACCCAAAGGGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CAA 72 bp | GTTCAGCTTGGAAATGCTCAGGCAGAGAGCGGCCGCTaGGTGGTCCGGATTCAGAGCCCATGGGGAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQLGNAQAESGR*VVRIQSPWGRL Trigger: AAGCCTTCCCCATGGGCTCTGAATCCGGACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | AGGTTGCGCAGCGCGATGGCTACAGCGCGCACCACCTaGTCGGTCTCAGACTGTAGCAGTTCCACCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: RLRSAMATARTT*SVSDCSSSTST Trigger: AGTACTGGTGGAACTGCTACAGTCTGAGACCGACAAGGTGGTGCGCGCTGTAGCCATCGCGCTGCGCAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | CGGGTTGTACCATCTTCTGATGTGACGATGGACACGTaGGAGGTGGGGGTGCCAGGGTCTTCCTCCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVVPSSDVTMDT*EVGVPGSSSTV Trigger: GACTGTGGAGGAAGACCCTGGCACCCCCACCTCTCACGTGTCCATCGTCACATCAGAAGATGGTACAACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | TGTCCAGGCTGTCGGACACGATCTCATGGATGGTGTTaGGCACGGCAACCACAGTATCCTCCTCCAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPGCRTRSHGWC*ARQPQYPPPGG Trigger: CCCACCTGGAGGAGGATACTGTGGTTGCCGTGCTCAACACCATCCATGAGATCGTGTCCGACAGCCTGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TCTAGTAATGCCACAAGCAGGGGGAGCCCACGCAGCTaGCGCACTCGCCGCTTAATACCCTCGTTCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSNATSRGSPRS*RTRRLIPSFSK Trigger: CTTTGAGAACGAGGGTATTAAGCGGCGAGTGCGGCAGCTGCGTGGGCTCCCCCTGCTTGTGGCATTACTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TACCACCTCCGGCTGGTACAGCAGCTCGAAGCCTTTTaGAGCCTCCGTTCGTTTAGGCAGGTCCAGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YHLRLVQQLEAF*SLRSFRQVQCV Trigger: GACACACTGGACCTGCCTAAACGAACGGAGGCTGCAAAAGGCTTCGAGCTGCTGTACCAGCCGGAGGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | AGCCACCTCCACTGCTGTGGTAGGTTCGGGAGAGTGTaGCTGCTGGACCACCACCACCACGAAGTAGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SHLHCCGRFGRV*LLDHHHHEVGN Trigger: ATTACCTACTTCGTGGTGGTGGTGGTCCAGCAGCCACACTCTCCCGAACCTACCACAGCAGTGGAGGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | TCTGGGCCCAAAGGCACCTGGCGTACTGTCCTTGTGGTCACAGTCTaGACCGTCTTAGTGACCTTAGTCTCAGTCCGCCGGGTTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: SGPKGTWRTVLVVTV*TVLVTLVSVRRVVP Trigger: TGGTACAACCCGGCGGACTGAGACTAAGGTCACTAAGACGGTCAAGACTGTGACCACAAGGACAGTACGCCAGGTGCCTTTGGGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | TTCCAGGGTGTTGAAGTTCCGGCTCTCCGTAAGGAGTaGGAGGTAGAGACGTACCACCTCCGGCTGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: FQGVEVPALRKE*EVETYHLRLVQ Trigger: CTGTACCAGCCGGAGGTGGTACGTCTCTACCTCTCACTCCTTACGGAGAGCCGGAACTTCAACACCCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | CTCCGTGTATCATCCTCCAGGCCATATGGTTCAGCTTaGAAATGCTCAGGCAGAGAGCGGCCGCTTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRVSSSRPYGSA*KCSGRERPLGG Trigger: ACCACCAAGCGGCCGCTCTCTGCCTGAGCATTTCCAAGCTGAACCATATGGCCTGGAGGATGATACACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CCA 72 bp | ACCACTCCTCTTTTGCTTTCTTGCCACCAAAGCAGCTaGCGTCATCCTTCCTCCGTCGCTGGGAGGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TTPLLLSCHQSS*RHPSSVAGRLC Trigger: GCACAACCTCCCAGCGACGGAGGAAGGATGACGCCAGCTGCTTTGGTGGCAAGAAAGCAAAAGAGGAGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | TTGTCCAGGCTGTCGGACACGATCTCATGGATGGTGTaGAGCACGGCAACCACAGTATCCTCCTCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRLSDTISWMV*STATTVSSSRW Trigger: CCACCTGGAGGAGGATACTGTGGTTGCCGTGCTCAACACCATCCATGAGATCGTGTCCGACAGCCTGGACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | TCTGCACCATCTGAGCTCACATTCCTCAGGCAGCCTGATGTGTTCTaGAAGACTGTTGTCCACTCGGCATCCCGGGGCTTCGAGTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SAPSELTFLRQPDVF*KTVVHSASRGFESS Trigger: CGAAGACTCGAAGCCCCGGGATGCCGAGTGGACAACAGTCTTCAAGAACACATCAGGCTGCCTGAGGAATGTGAGCTCAGATGGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 90 bp | AGTGGCAGTGTGCTGTCATCAAAGCCGCCAGAACTTGGTGTCCCTTaGGGTCCTTTGGCAGTGCTAGCAGACTGGAAGCGTGACTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGSVLSSKPPELGVP*GPLAVLADWKRDFV Trigger: GACGAAGTCACGCTTCCAGTCTGCTAGCACTGCCAAAGGACCCAAAGGGACACCAAGTTCTGGCGGCTTTGATGACAGCACACTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CAA 72 bp | AAAGGCACCTGGCGTACTGTCCTTGTGGTCACAGTCTaGACCGTCTTAGTGACCTTAGTCTCAGTCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KGTWRTVLVVTV*TVLVTLVSVRR Trigger: CCGGCGGACTGAGACTAAGGTCACTAAGACGGTCAAGACTGTGACCACAAGGACAGTACGCCAGGTGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS CAA 72 bp | TCTGAGCTCACATTCCTCAGGCAGCCTGATGTGTTCTaGAAGACTGTTGTCCACTCGGCATCCCGGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SELTFLRQPDVF*KTVVHSASRGF Trigger: GAAGCCCCGGGATGCCGAGTGGACAACAGTCTTCAAGAACACATCAGGCTGCCTGAGGAATGTGAGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS TCA 72 bp | ACCAAGGGTATCCATGGGGATCACATCCCGGGTGTTTaGCTTCTCCCCATCAAGGCTCTTGTCTACCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TKGIHGDHIPGV*LLPIKALVYQW Trigger: CCACTGGTAGACAAGAGCCTTGATGGGGAGAAGTCAAACACCCGGGATGTGATCCCCATGGATACCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS GCA 72 bp | TCTCCCCATCAAGGCTCTTGTCTACCAGTGGCAGTGTaGTGTCATCAAAGCCGCCAGAACTTGGTGTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPHQGSCLPVAV*CHQSRQNLVSL Trigger: AAGGGACACCAAGTTCTGGCGGCTTTGATGACAGCACACTGCCACTGGTAGACAAGAGCCTTGATGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CCA 72 bp | CAACTGTGGCGTAACCATCTGGACCAAGGGTATCCATaGGGATCACATCCCGGGTGTTTGACTTCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QLWRNHLDQGYP*GSHPGCLTSPH Trigger: ATGGGGAGAAGTCAAACACCCGGGATGTGATCCCCATGGATACCCTTGGTCCAGATGGTTACGCCACAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS CAA 72 bp | GACCAAGGGTATCCATGGGGATCACATCCCGGGTGTTaGACTTCTCCCCATCAAGGCTCTTGTCTACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DQGYPWGSHPGC*TSPHQGSCLPV Trigger: CACTGGTAGACAAGAGCCTTGATGGGGAGAAGTCAAACACCCGGGATGTGATCCCCATGGATACCCTTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 ENSMUST00000239551.1 |
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| CDS GCA 72 bp | TCTTCCCTTGATGGAACCACTCCTCTTTTGCTTTCTTaGCACCAAAGCAGCTGGCGTCATCCTTCCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SSLDGTTPLLLS*HQSSWRHPSSV Trigger: GACGGAGGAAGGATGACGCCAGCTGCTTTGGTGGCAAGAAAGCAAAAGAGGAGTGGTTCCATCAAGGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | CACAGTTCTCTACTGACTTATTATCTGTGTCTTTCCTaGCCACAGCTGACTGCAGGGCATGTAGGAGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: HSSLLTYYLCLS*PQLTAGHVGER Trigger: ACGCTCTCCTACATGCCCTGCAGTCAGCTGTGGGCAGGAAAGACACAGATAATAAGTCAGTAGAGAACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000239533.1 ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239536.1 ENSMUST00000239538.1 ENSMUST00000239547.1 ENSMUST00000239548.1 |
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| CDS GCA 72 bp | TGCATCCTTCTTCCCTTGATGGAACCACTCCTCTTTTaGTTTCTTGCCACCAAAGCAGCTGGCGTCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: CILLPLMEPLLF*FLATKAAGVIL Trigger: AAGGATGACGCCAGCTGCTTTGGTGGCAAGAAAGCAAAAGAGGAGTGGTTCCATCAAGGGAAGAAGGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000239534.1 ENSMUST00000239535.1 ENSMUST00000239548.1 |
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