Pregenerated sensors for ARV1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031982Ensembl transcript IDs: ENSMUST00000034463.4, ENSMUST00000212036.2, ENSMUST00000212959.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGAAGAAACAGGGAGCCCAGCACCCCGTCCTCCTGGAGAGGGCTaGGAGGGGAGAGGCACGGACAGCGCCCACCCAGTCACACAGCGT | + |
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Preference number: 1 (lower is better) Translates to: SEETGSPAPRPPGEG*EGRGTDSAHPVTQR Trigger: ACGCTGTGTGACTGGGTGGGCGCTGTCCGTGCCTCTCCCCTCGCAGCCCTCTCCAGGAGGACGGGGTGCTGGGCTCCCTGTTTCTTCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR GCA 90 bp | CACTGCTCACATCCCACTCCATCCTCTGGAAGAAGAAGACCACAATaGTCTCCAGCAGTAAGCCACTTAGCACGACCAACAGGGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: HCSHPTPSSGRRRPQ*SPAVSHLARPTGRA Trigger: GGCTCTCCCTGTTGGTCGTGCTAAGTGGCTTACTGCTGGAGAGCATTGTGGTCTTCTTCTTCCAGAGGATGGAGTGGGATGTGAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR CCA 90 bp | AAGGGAACCACAGTGCTGCCTGAGAGCGTTCAGCCTTGGTATAGGTaGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: KGTTVLPESVQPWYR*FRSSGVSGYVQKSP Trigger: TGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR GCA 90 bp | AGCTGGTCCTTCAGAAGTCCTGAGACTTGTAGAGCGCACAGTCACTaGTCACATCCCACTCCATCCTCTGGAAGAAGAAGACCACAATGC | + |
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Preference number: 1 (lower is better) Translates to: SWSFRSPETCRAHSH*SHPTPSSGRRRPQC Trigger: GCATTGTGGTCTTCTTCTTCCAGAGGATGGAGTGGGATGTGAGCAGTGACTGTGCGCTCTACAAGTCTCAGGACTTCTGAAGGACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR CCA 90 bp | CATTCCTATAAGGGAACCACAGTGCTGCCTGAGAGCGTTCAGCCTTaGTATAGGTGGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: HSYKGTTVLPESVQP*YRWFRSSGVSGYVQ Trigger: CTGAACGTACCCAGACACCCCAGAAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR CCA 90 bp | GTGCCATGCTATGACAGTCCTCCCAACCACGAAACTAGTCATGTGTaGGATCATCCCCTTGTCTGTTGTTGGTGCCTTATGTGGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: VPCYDSPPNHETSHV*DHPLVCCWCLMWDG Trigger: CCCATCCCACATAAGGCACCAACAACAGACAAGGGGATGATCCCACACATGACTAGTTTCGTGGTTGGGAGGACTGTCATAGCATGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR TCA 90 bp | GAGCCTCCGGTTTGTGTTCAGGGTCACTCTGACTGCCTGGAAATTTaGGGTCAGGACAAACACTTTAATGAGCCTGAGACACAGAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: EPPVCVQGHSDCLEI*GQDKHFNEPETQRC Trigger: ACACCTCTGTGTCTCAGGCTCATTAAAGTGTTTGTCCTGACCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACACAAACCGGAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR GCA 90 bp | GGAAGGATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTaGTGCCTGAGAGCGTTCAGCCTTGGTATAGGTGGTTCAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: GRMELRAIIPIREPQ*CLRAFSLGIGGSDL Trigger: AAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCATCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR CCA 90 bp | AACAGGGAGAGCCTCCGGTTTGTGTTCAGGGTCACTCTGACTGCCTaGAAATTTGAGGTCAGGACAAACACTTTAATGAGCCTGAGACAC | + |
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Preference number: 1 (lower is better) Translates to: NRESLRFVFRVTLTA*KFEVRTNTLMSLRH Trigger: GTGTCTCAGGCTCATTAAAGTGTTTGTCCTGACCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACACAAACCGGAGGCTCTCCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR TCA 90 bp | ACTCACAGAAAGCAGAGACCTTGGGTTCTTTTGTGCCTTCTCTTTTaGGGTAGCTGGTCCTTCAGAAGTCCTGAGACTTGTAGAGCGCAC | + |
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Preference number: 1 (lower is better) Translates to: THRKQRPWVLLCLLF*GSWSFRSPETCRAH Trigger: GTGCGCTCTACAAGTCTCAGGACTTCTGAAGGACCAGCTACCTCAAAAGAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR GCA 90 bp | GTAGCTGGACAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGGTTGCGAAAGAAGCGATCACAAACA | + |
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Preference number: 1 (lower is better) Translates to: VAGQQQCFQQQNKVG*SFCCHGLRKKRSQT Trigger: TGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCCGTCCTCCTGGAGAGGGCTGCGAGGGGAGAGGCACGGACAGCGCCCACCTTGGTGGGGCAGCTaGCCAGAAAGGTGCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: STPSSWRGLRGERHGQRPPWWGS*PERCHA Trigger: AGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGG...TGGGCGCTGTCCGTGCCTCTCCCCTCGCAGCCCTCTCCAGGAGGACGGGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTGCCATGCTATGACAGTCCTCCTTGTCTGTTGTTGGTaGCTTATGTGGGATGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: DFPWWGSCPERCHAMTVLLVCCW*LMWDGR Trigger: CCGCCCATCCCACATAAGGCACCAACAACAGACAAG...GAGGACTGTCATAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGACAGTGAGGACCGGTGGGGAGCAGCAATGGAGGCAAGTGAAGAAACAGGGCCCCTTGTCTGTTGTTaGTGCCTTATGTGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LDSEDRWGAAMEASEETGPLVCC*CLMWDG Trigger: CCCATCCCACATAAGGCACCAACAACAGACAAGGGG...CCCTGTTTCTTCACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACTTAGCACGACCAACAGGGAGAGCCTCCGGTTTGTGTTCAGGGTCACTCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGG | + |
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Preference number: 2 (lower is better) Translates to: KPLSTTNRESLRFVFRVTQNKVG*SFCCHG Trigger: CCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTG...AGTGACCCTGAACACAAACCGGAGGCTCTCCCTGTTGGTCGTGCTAAGTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAGACTTGTAGAGCGCACAGTCACTGCTCACATCCCACTCCATCCTCTGTTTGCTGTCATGGGTTaGGAAAGAAGCGATCACAAA | + |
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Preference number: 2 (lower is better) Translates to: VLRLVERTVTAHIPLHPLFAVMG*ERSDHK Trigger: TTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAA...CAGAGGATGGAGTGGGATGTGAGCAGTGACTGTGCGCTCTACAAGTCTCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCAGAAAGCAGAGACCTTaGGTTCTTTTGTGCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: VQIFWGVWVRSEIPSLGFRKQRP*VLLCLL Trigger: GAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCT...GAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTAGAAAGCAGAGACCTTaGGTTCTTTTGTGCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSDLLGCLGTFRNPQSWLRKQRP*VLLCLL Trigger: GAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCT...AAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCAGAGAGCGTTCAGCCTTaGTATAGGTGGTTCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: FRSSGVSGYVQKSPVLASESVQP*YRWFRS Trigger: AGATCTGAACCACCTATACCAAGGCTGAACGCTCTC...TGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| 3UTR CAA 90 bp | TTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTaGCGAAAGAAGCGATCACAAACATCCTGTAGAAGTCCCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FQQQNKVGCSFCCHG*RKKRSQTSCRSPTP Trigger: AGGAGTGGGACTTCTACAGGATGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCAAGAAATCCCCAGTCTTaGCTTCACTCACAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FRSSGVSGYVQKSPVLASRNPQS*LHSQKA Trigger: TGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCT...TGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGGACAAACACTTTAATGAGCCTGAGACACAGAGGTGTGTAGTCATGTTCGCTGGACAGCAACAGTaGTTTCAGCAGCAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: GQDKHFNEPETQRCVVMFAGQQQ*FQQQNK Trigger: TTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGC...GAACATGACTACACACCTCTGTGTCTCAGGCTCATTAAAGTGTTTGTCCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTTTGAGGTAGCTGGTCCTTCAGAAGTCCTGAGACTTGTAGAGCGCACACTCTTTTTGCTGTCATaGGTTGCGAAAGAAGCGATC | + |
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Preference number: 2 (lower is better) Translates to: FSFEVAGPSEVLRLVERTLFLLS*VAKEAI Trigger: GATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAG...TGTGCGCTCTACAAGTCTCAGGACTTCTGAAGGACCAGCTACCTCAAAAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGGACAAACACTTTAATGAGCCTGAGACACAGAGGTGTGTAGTCATGTTCAGAAATCCCCAGTCTTaGCTTCACTCACAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GQDKHFNEPETQRCVVMFRNPQS*LHSQKA Trigger: TGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCT...GAACATGACTACACACCTCTGTGTCTCAGGCTCATTAAAGTGTTTGTCCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGGGTTAAAGCCACCAGTGTAATAAAATATTACACTAAAGAGCAGGAAGGAAACCACAGTGCTGCCTaGGAGCGTTCAGCCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: YRVKATSVIKYYTKEQEGNHSAA*ERSALV Trigger: TACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTT...TCCTTCCTGCTCTTTAGTGTAATATTTTATTACACTGGTGGCTTTAACCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR-3UTR GCA 90 bp | GCTTCACTCACAGAAAGCAGAGACCTTGGGTTCTTTTGTGCCTTCTCTTTTGAGAAGATAACTTCAAAGTaGTTCTGTCAGAAAGACACA | + |
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Preference number: 2 (lower is better) Translates to: ASLTESRDLGFFCAFSFEKITSK*FCQKDT Trigger: TGTGTCTTTCTGACAGAAGCACTTTGAAGTTATCTT...CTCAAAAGAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTGTGAGTGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR TCA 72 bp | GAGAGGCACGGACAGCGCCCACCCAGTCACACAGCGTaGCAGGATGCCCCCGGAACGATGACCCCCAGAATG | + |
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Preference number: 3 (lower is better) Translates to: ERHGQRPPSHTA*QDAPGTMTPRM Trigger: CATTCTGGGGGTCATCGTTCCGGGGGCATCCTGTCACGCTGTGTGACTGGGTGGGCGCTGTCCGTGCCTCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCCGTCCTCCTGGAGAGGGCTGCGAGGGGAGAGGCACGGACAGCGCCCATCATCCCCTTGTCTGTaGTTGGTGCCTTATGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: STPSSWRGLRGERHGQRPSSPCL*LVPYVG Trigger: TCCCACATAAGGCACCAACAACAGACAAGGGGATGA...TGGGCGCTGTCCGTGCCTCTCCCCTCGCAGCCCTCTCCAGGAGGACGGGGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCACAGAGGGTTAGACAGTGAGGACCGGTGGGGAGCAGCAATGGAGGCAAGTCCGAGGAGACTTTCCTaGGTGGGGCAGCTGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GHRGLDSEDRWGAAMEASPRRLS*VGQLPR Trigger: TCTGGGCAGCTGCCCCACCAAGGAAAGTCTCCTCGG...ACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGTCTAACCCTCTGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR CCA 72 bp | AGCAAGGGCCACAGAGGGTTAGACAGTGAGGACCGGTaGGGAGCAGCAATGGAGGCAAGTGAAGAAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: SKGHRGLDSEDR*GAAMEASEETG Trigger: CCCTGTTTCTTCACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGTCTAACCCTCTGTGGCCCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGAGGACCGGTGGGGAGCAGCAATGGAGGCAAGTGAAGAAACAGGGAGCCTGTGGGATCATCCCCTaGTCTGTTGTTGGTGCCTTA | + |
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Preference number: 3 (lower is better) Translates to: TVRTGGEQQWRQVKKQGACGIIP*SVVGAL Trigger: TAAGGCACCAACAACAGACAAGGGGATGATCCCACA...GGCTCCCTGTTTCTTCACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR GCA 72 bp | GGAGACTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTaGCATGCTATGACAGTCCTCCCAACCACGAAACTA | + |
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Preference number: 3 (lower is better) Translates to: GDFPWWGSCPER*HAMTVLPTTKL Trigger: TAGTTTCGTGGTTGGGAGGACTGTCATAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR CCA 72 bp | AAGGGAACCACAGTGCTGCCTGAGAGCGTTCAGCCTTaGTATAGGTGGTTCAGATCTTCTGGGGTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: KGTTVLPESVQP*YRWFRSSGVSG Trigger: CCCAGACACCCCAGAAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR GCA 72 bp | CTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTGCCATaGTATGACAGTCCTCCCAACCACGAAACTAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: LSLVGQLPRKVP*YDSPPNHETSH Trigger: ATGACTAGTTTCGTGGTTGGGAGGACTGTCATAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR GCA 72 bp | AGTCATGTGTGGGATCATCCCCTTGTCTGTTGTTGGTaGCTTATGTGGGATGGGCGGATGACACGATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SHVWDHPLVCCW*LMWDGRMTRFQ Trigger: CTGGAATCGTGTCATCCGCCCATCCCACATAAGGCACCAACAACAGACAAGGGGATGATCCCACACATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR CCA 72 bp | CTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTaGCTTCACTCACAGAAAGCAGAGACCTTGGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: LGCLGTFRNPQS*LHSQKAETLGS Trigger: AGAACCCAAGGTCTCTGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGACTTGTAGAGCGCACAGTCACTGCTCACATCCCACTCCATCCTCTGGACAGAAAGCAGAGACCTaGGGTTCTTTTGTGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PETCRAHSHCSHPTPSSGQKAET*GSFVPS Trigger: AGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTG...TCCAGAGGATGGAGTGGGATGTGAGCAGTGACTGTGCGCTCTACAAGTCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR TCA 72 bp | ACAGGGAGAGCCTCCGGTTTGTGTTCAGGGTCACTCTaGCTGCCTGGAAATTTGAGGTCAGGACAAACACTT | + |
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Preference number: 3 (lower is better) Translates to: TGRASGLCSGSL*LPGNLRSGQTL Trigger: AAGTGTTTGTCCTGACCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACACAAACCGGAGGCTCTCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR GCA 72 bp | GAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTaGTGCCTGAGAGCGTTCAGCCTTGGTATAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: ELRAIIPIREPQ*CLRAFSLGIGG Trigger: ACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR-3UTR CAA 90 bp | GATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTGCCTGAGAGCCAGAAAGCAGAGACCTaGGGTTCTTTTGTGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: DGAQSYHSYKGTTVLPESQKAET*GSFVPS Trigger: AGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTG...GCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR GCA 72 bp | CTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTaGCTGAGAGCGTTCAGCCTTGGTATAGGTGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LRAIIPIREPQC*LRAFSLGIGGS Trigger: TGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR GCA 72 bp | CAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGGTTGCGAAAGAAGCGA | + |
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Preference number: 3 (lower is better) Translates to: QQQCFQQQNKVG*SFCCHGLRKKR Trigger: TCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR GCA 72 bp | TTCAGAAGTCCTGAGACTTGTAGAGCGCACAGTCACTaGTCACATCCCACTCCATCCTCTGGAAGAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FRSPETCRAHSH*SHPTPSSGRRR Trigger: TCTTCTTCTTCCAGAGGATGGAGTGGGATGTGAGCAGTGACTGTGCGCTCTACAAGTCTCAGGACTTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR CCA 72 bp | TATGACAGTCCTCCCAACCACGAAACTAGTCATGTGTaGGATCATCCCCTTGTCTGTTGTTGGTGCCTTATG | + |
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Preference number: 3 (lower is better) Translates to: YDSPPNHETSHV*DHPLVCCWCLM Trigger: CATAAGGCACCAACAACAGACAAGGGGATGATCCCACACATGACTAGTTTCGTGGTTGGGAGGACTGTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR GCA 72 bp | TGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTaGTGTCATGGGTTGCGAAAGAAGCGATCACAAACA | + |
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Preference number: 3 (lower is better) Translates to: CFQQQNKVGCSF*CHGLRKKRSQT Trigger: TGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR GCA 72 bp | AGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTTaGGAAAGAAGCGATCACAAACATCCTGTAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: RTKSGALFAVMG*ERSDHKHPVEV Trigger: GACTTCTACAGGATGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| 3UTR-3UTR CAA 90 bp | TACAGGGTTAAAGCCACCAGTGTAATAAAATATTACACTAAAGAGCAGGAAGGACAGAAATCCCCAGTCTaGGCTTCACTCACAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: YRVKATSVIKYYTKEQEGQKSPV*ASLTES Trigger: GCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCTG...TCCTTCCTGCTCTTTAGTGTAATATTTTATTACACTGGTGGCTTTAACCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | GAGAGGGCTGCGAGGGGAGAGGCACGGACAGCGCCCACCCAGTCACACAGCGTGTTTGCTGTCATGGGTTaGTGTACCCACAGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERAARGEARTAPTQSHSVFAVMG*CTHRKA Trigger: TGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAA...CACGCTGTGTGACTGGGTGGGCGCTGTCCGTGCCTCTCCCCTCGCAGCCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| CDS-3UTR GCA 90 bp | TGGAGAGGGCTGCGAGGGGAGAGGCACGGACAGCGCCCACCCAGTCACACAGCGAGAAGAAGACCACAATaGTCTCCAGCAGTAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGLRGERHGQRPPSHTARRRPQ*SPAVSH Trigger: GTGGCTTACTGCTGGAGAGCATTGTGGTCTTCTTCT...CGCTGTGTGACTGGGTGGGCGCTGTCCGTGCCTCTCCCCTCGCAGCCCTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTGCCTGAGAGCGCTCTGGCTCGAGTCCTaGAGCTGCCACCACCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MELRAIIPIREPQCCLRALWLES*SCHHRR Trigger: CCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAG...CGCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | GTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCCTCTGGCTCGAGTCCTaGAGCTGCCACCACCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQIFWGVWVRSEIPSLGFLWLES*SCHHRR Trigger: CCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAG...GAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS-3UTR TCA 90 bp | AAGGATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTGCCTGAGTCCCGGTACAGCTCCTaGGCCTCTCGGTTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KDGAQSYHSYKGTTVLPESRYSS*ASRLHS Trigger: CGAGTGCAACCGAGAGGCTCAGGAGCTGTACCGGGA...CTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR TCA 90 bp | GATGCCGAGGAGACTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTGCCATGCTATGTTCAGGGTCACTCTaGCTGCCTGGAAATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DAEETFLGGAAAQKGAMLCSGSL*LPGNLR Trigger: CCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACA...TAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAGTCTCCTCGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| CDS-3UTR GCA 90 bp | GGCCACAGAGGGTTAGACAGTGAGGACCGGTGGGGAGCAGCAATGGAGGCAAGTCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHRGLDSEDRWGAAMEASQNKVG*SFCCHG Trigger: CCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTG...ACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGTCTAACCCTCTGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| CDS-3UTR CCA 90 bp | GATGCCGAGGAGACTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTGCCATGCTATCCCACTCCATCCTCTaGAAGAAGAAGACCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: DAEETFLGGAAAQKGAMLSHSIL*KKKTTM Trigger: CATTGTGGTCTTCTTCTTCCAGAGGATGGAGTGGGA...TAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAGTCTCCTCGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| CDS-3UTR TCA 90 bp | GTGGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTGCAGATGGTTATCTTaGGCACGCCGTGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVQIFWGVWVRSEIPSLGCRWLS*ARRGCS Trigger: ACTACAGCCACGGCGTGCTCAAGATAACCATCTGCA...GCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS-3UTR CCA 90 bp | GACTTTCCTTGGTGGGGCAGCTGCCCAGAAAGGTGCCATGCTATGACAGTCCTCCTCTTTTTGCTGTCATaGGTTGCTGTACCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DFPWWGSCPERCHAMTVLLFLLS*VAVPTG Trigger: TCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAG...GAGGACTGTCATAGCATGGCACCTTTCTGGGCAGCTGCCCCACCAAGGAAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
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| 3UTR CAA 72 bp | TCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTaGGCTTCACTCACAGAAAGCAGAGACCTTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGVSGYVQKSPV*ASLTESRDLGF Trigger: GAACCCAAGGTCTCTGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS-3UTR GCA 90 bp | TTAGACAGTGAGGACCGGTGGGGAGCAGCAATGGAGGCAAGTGAAGAAACAGGGGCTGGACAGCAACAGTaGTTTCAGCAGCAGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSEDRWGAAMEASEETGAGQQQ*FQQQNK Trigger: TTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGC...CCCTGTTTCTTCACTTGCCTCCATTGCTGCTCCCCACCGGTCCTCACTGTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212959.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTGCTGTCATGGGTTGCGAAAGAAGCGATCACAAACATCCTGTAGAAGTTCCCGGTACAGCTCCTaGGCCTCTCGGTTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFCCHGLRKKRSQTSCRSSRYSS*ASRLHS Trigger: CGAGTGCAACCGAGAGGCTCAGGAGCTGTACCGGGA...ACTTCTACAGGATGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTGCTGTCTGCAGATGGTTATCTTaGGCACGCCGTGGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSNSAFSSRTKSGALFAVCRWLS*ARRGCS Trigger: ACTACAGCCACGGCGTGCTCAAGATAACCATCTGCA...GACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
||
| CDS-3UTR TCA 90 bp | GGTATAGGTGGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTGTTCAGGGTCACTCTaGCTGCCTGGAAATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIGGSDLLGCLGTFRNPQCSGSL*LPGNLR Trigger: CCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACA...CTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAACCACCTATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR CCA 90 bp | CTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCACTCACAGGTCACTCTGACTGCCTaGAAATTTGAGGTCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGCLGTFRNPQSWLHSQVTLTA*KFEVRT Trigger: TGTCCTGACCTCAAATTTCCAGGCAGTCAGAGTGAC...CTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
||
| CDS-3UTR GCA 90 bp | GTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQIFWGVWVRSEIPSLGFQNKVG*SFCCHG Trigger: CCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTG...GAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | TTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCACTCACAGAGCTGGACAGCAACAGTaGTTTCAGCAGCAGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FWGVWVRSEIPSLGFTHRAGQQQ*FQQQNK Trigger: TTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGC...TCTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR CCA 90 bp | GACCAACAGGGAGAGCCTCCGGTTTGTGTTCAGGGTCACTCTGACTGCCTGGAAGATGTATTTGTCTACTaGTTTCTGGCAGGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQQGEPPVCVQGHSDCLEDVFVY*FLAGFA Trigger: TGCAAATCCTGCCAGAAACCAGTAGACAAATACATC...TTCCAGGCAGTCAGAGTGACCCTGAACACAAACCGGAGGCTCTCCCTGTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCCTCTTTTTGCTGTCATaGGTTGCTGTACCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQIFWGVWVRSEIPSLGFLFLLS*VAVPTG Trigger: TCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAG...GAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | CAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCACTCCACCACCGCAGGTATaGTTCACAAAGCAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QIFWGVWVRSEIPSLGFTPPPQV*FTKQTK Trigger: TTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGG...AGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCACTCACAGAAAGCAGAGATCCCACTCCATCCTCTaGAAGAAGAAGACCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VWVRSEIPSLGFTHRKQRSHSIL*KKKTTM Trigger: CATTGTGGTCTTCTTCTTCCAGAGGATGGAGTGGGA...TCTCTGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR CAA 72 bp | GTGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTaGCTGTCATGGGTTGCGAAAGAAGCGATCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSAAEQSRVLF*LSWVAKEAITN Trigger: GTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| CDS-3UTR TCA 90 bp | GTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCACTCACAGAAAGCAGAGAGACTGCCTGGAAATTTaGGGTCAGGACAAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWVRSEIPSLGFTHRKQRDCLEI*GQDKHF Trigger: AAAGTGTTTGTCCTGACCTCAAATTTCCAGGCAGTC...TCTCTGCTTTCTGTGAGTGAAGCCAAGACTGGGGATTTCTGAACGTACCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTCACTCACAGAAAGCAGAGACCTTGGGTTCTTTTGTGCCTTCTCTTTTGTTTGCTGTCATGGGTTaGTGTACCCACAGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLHSQKAETLGSFVPSLLFAVMG*CTHRKA Trigger: TGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAA...CAAAAGAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTGTGAGTGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR GCA 90 bp | ACAGAAAGCAGAGACCTTGGGTTCTTTTGTGCCTTCTCTTTTGAGGTAGCTGGTAGAAGAAGACCACAATaGTCTCCAGCAGTAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TESRDLGFFCAFSFEVAGRRRPQ*SPAVSH Trigger: GTGGCTTACTGCTGGAGAGCATTGTGGTCTTCTTCT...ACCAGCTACCTCAAAAGAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| 3UTR CAA 72 bp | CAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTaGCGAAAGAAGCGATCACAAACATCCTGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNKVGCSFCCHG*RKKRSQTSCRS Trigger: ACTTCTACAGGATGTTTGTGATCGCTTCTTTCGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTCACTCACAGAAAGCAGAGACCTTGGGTTCTTTTGTGCCTTCTCTTTTGCCACCACCGCAGGTATaGTTTATTTTAGTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLHSQKAETLGSFVPSLLPPPQV*FILVLK Trigger: TTTCAACACTAAAATAAATCATACCTGCGGTGGTGG...CAAAAGAGAAGGCACAAAAGAACCCAAGGTCTCTGCTTTCTGTGAGTGAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| CDS-3UTR CCA 90 bp | ATTACACTAAAGAGCAGGAAGGATGGAGCTCAGAGCTATCATTCCTATAAGGGAGATGTATTTGTCTACTaGTTTCTGGCAGGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLKSRKDGAQSYHSYKGDVFVY*FLAGFA Trigger: TGCAAATCCTGCCAGAAACCAGTAGACAAATACATC...TCCCTTATAGGAATGATAGCTCTGAGCTCCATCCTTCCTGCTCTTTAGTGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS CCA 90 bp | GTAGAAGTCCCACTCCTTGGCGTACCGGATCACGTCATCGGGGGCTaGACTCTGGCTCGAGTCCTGCAGCTGCCACCACCGCAGGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: VEVPLLGVPDHVIGG*TLARVLQLPPPQVC Trigger: GCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGCCAAGGAGTGGGACTTCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS CCA 90 bp | TCCCACTCCTTGGCGTACCGGATCACGTCATCGGGGGCTGGACTCTaGCTCGAGTCCTGCAGCTGCCACCACCGCAGGTATGCTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SHSLAYRITSSGAGL*LESCSCHHRRYASQ Trigger: TTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGCCAAGGAGTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS GCA 90 bp | GCGTACCGGATCACGTCATCGGGGGCTGGACTCTGGCTCGAGTCCTaGAGCTGCCACCACCGCAGGTATGCTTCACAAAGCAAACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AYRITSSGAGLWLES*SCHHRRYASQSKQN Trigger: GTTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS GCA 90 bp | CGGATCACGTCATCGGGGGCTGGACTCTGGCTCGAGTCCTGCAGCTaGCACCACCGCAGGTATGCTTCACAAAGCAAACAAAACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RITSSGAGLWLESCS*HHRRYASQSKQNMQ Trigger: CTGCATGTTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS GCA 90 bp | GGCTGGACTCTGGCTCGAGTCCTGCAGCTGCCACCACCGCAGGTATaGTTCACAAAGCAAACAAAACATGCAGAGTTTCCCATGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: GWTLARVLQLPPPQV*FTKQTKHAEFPMDI Trigger: AATATCCATGGGAAACTCTGCATGTTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS-3UTR CAA 90 bp | GATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTGCCTGAGAGCTTTTGCTGTCATGGGTaGCTGTACCCACAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGAQSYHSYKGTTVLPESFCCHG*LYPQES Trigger: GCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAA...GCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS GCA 90 bp | GTAGCTGGACAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGGTTGCTGTACCCACAGGAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VAGQQQCFQQQNKVG*SFCCHGLLYPQESK Trigger: TTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS-3UTR CAA 90 bp | GTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCTTGGCTTCGGTTTCTGGCAGGATTaGCAGATGGTTATCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQIFWGVWVRSEIPSLGFGFWQD*QMVILS Trigger: GCTCAAGATAACCATCTGCAAATCCTGCCAGAAACC...GAAGCCAAGACTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS GCA 90 bp | CAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTaGTGTCATGGGTTGCTGTACCCACAGGAAAGCAAATATGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QQQCFQQQNKVGCSF*CHGLLYPQESKYAS Trigger: ACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS GCA 90 bp | TTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTTaGTGTACCCACAGGAAAGCAAATATGCCAGTAAGAAAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSRTKSGALFAVMG*CTHRKANMPVRKAA Trigger: AGCTGCCTTTCTTACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTTTGAGGTAGCTGGTCCTTCAGAAGTCCTGAGACTTGTAGAGCGCACAGGTTTCTGGCAGGATTaGCAGATGGTTATCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFEVAGPSEVLRLVERTGFWQD*QMVILS Trigger: GCTCAAGATAACCATCTGCAAATCCTGCCAGAAACC...TGTGCGCTCTACAAGTCTCAGGACTTCTGAAGGACCAGCTACCTCAAAAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212036.2 |
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| CDS-3UTR CAA 90 bp | GATGGAGCTCAGAGCTATCATTCCTATAAGGGAACCACAGTGCTGCCTGAGAGCTCGTATTCGATGTATTaGTCTACTGGTTTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGAQSYHSYKGTTVLPESSYSMY*STGFWQ Trigger: CTGCCAGAAACCAGTAGACAAATACATCGAATACGA...GCTCTCAGGCAGCACTGTGGTTCCCTTATAGGAATGATAGCTCTGAGCTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
||
| CDS-3UTR CAA 90 bp | GGTATAGGTGGTTCAGATCTTCTGGGGTGTCTGGGTACGTTCAGAAATCCCCAGTCGTATTCGATGTATTaGTCTACTGGTTTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GIGGSDLLGCLGTFRNPQSYSMY*STGFWQ Trigger: CTGCCAGAAACCAGTAGACAAATACATCGAATACGA...CTGGGGATTTCTGAACGTACCCAGACACCCCAGAAGATCTGAACCACCTATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
||
| CDS CCA 72 bp | CCACTCCTTGGCGTACCGGATCACGTCATCGGGGGCTaGACTCTGGCTCGAGTCCTGCAGCTGCCACCACCG | + |
|
Preference number: 6 (lower is better) Translates to: PLLGVPDHVIGG*TLARVLQLPPP Trigger: CGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGCCAAGGAGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
||
| CDS CCA 72 bp | TTGGCGTACCGGATCACGTCATCGGGGGCTGGACTCTaGCTCGAGTCCTGCAGCTGCCACCACCGCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LAYRITSSGAGL*LESCSCHHRRY Trigger: ATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
||
| CDS GCA 72 bp | GATACAACGATACAGGCAAGAGGAAGAAGTCGCCGCTaGGCCTTCCGTGCCTTTCCCGGACCGCGTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DTTIQARGRSRR*AFRAFPGPRPP Trigger: AGGGGGACGCGGTCCGGGAAAGGCACGGAAGGCGCAGCGGCGACTTCTTCCTCTTGCCTGTATCGTTGTATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
||
| CDS GCA 72 bp | ATCACGTCATCGGGGGCTGGACTCTGGCTCGAGTCCTaGAGCTGCCACCACCGCAGGTATGCTTCACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITSSGAGLWLES*SCHHRRYASQS Trigger: GCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGACGTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
||
| CDS GCA 72 bp | TCATCGGGGGCTGGACTCTGGCTCGAGTCCTGCAGCTaGCACCACCGCAGGTATGCTTCACAAAGCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: SSGAGLWLESCS*HHRRYASQSKQ Trigger: TTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAGAGTCCAGCCCCCGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS TCA 72 bp | CTACTGGTTTCTGGCAGGATTTGCAGATGGTTATCTTaGGCACGCCGTGGCTGTAGTCCCGGTACAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLVSGRICRWLS*ARRGCSPGTAP Trigger: AGGAGCTGTACCGGGACTACAGCCACGGCGTGCTCAAGATAACCATCTGCAAATCCTGCCAGAAACCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS GCA 72 bp | CTGGCTCGAGTCCTGCAGCTGCCACCACCGCAGGTATaGTTCACAAAGCAAACAAAACATGCAGAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LARVLQLPPPQV*FTKQTKHAEFP Trigger: GGGAAACTCTGCATGTTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTCGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034463.4 |
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| CDS GCA 72 bp | CAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTaGTCTTTTTGCTGTCATGGGTTGCTGTACCCACAG | + |
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Preference number: 6 (lower is better) Translates to: QQQCFQQQNKVG*SFCCHGLLYPQ Trigger: CTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CCA 72 bp | GCAGCAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATaGGTTGCTGTACCCACAGGAAAGCAAATATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AAEQSRVLFLLS*VAVPTGKQICQ Trigger: CTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 72 bp | GTGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTaGCTGTCATGGGTTGCTGTACCCACAGGAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VLSAAEQSRVLF*LSWVAVPTGKQ Trigger: TTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 90 bp | ACAGCAACAGTGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTaGCTGTCATGGGTTGCTGTACCCACAGGAAAGCAAATATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TATVLSAAEQSRVLF*LSWVAVPTGKQICQ Trigger: CTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS GCA 72 bp | TGCTTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTaGTGTCATGGGTTGCTGTACCCACAGGAAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CFQQQNKVGCSF*CHGLLYPQESK Trigger: TTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 90 bp | TTTCAGCAGCAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTaGCTGTACCCACAGGAAAGCAAATATGCCAGTAAGAAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FQQQNKVGCSFCCHG*LYPQESKYASKKGS Trigger: GCTGCCTTTCTTACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 72 bp | CAGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTaGCTGTACCCACAGGAAAGCAAATATGCCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QNKVGCSFCCHG*LYPQESKYASK Trigger: CTTACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS GCA 72 bp | AGAACAAAGTCGGGTGCTCTTTTTGCTGTCATGGGTTaGTGTACCCACAGGAAAGCAAATATGCCAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: RTKSGALFAVMG*CTHRKANMPVR Trigger: TCTTACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGACAGCAAAAAGAGCACCCGACTTTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 72 bp | CCACAGGAAAGCAAATATGCCAGTAAGAAAGGCAGCTaGTTCGAAAGAAGCGATCACAAACATCCTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: PQESKYASKKGS*FERSDHKHPVE Trigger: TTCTACAGGATGTTTGTGATCGCTTCTTTCGAACAAGCTGCCTTTCTTACTGGCATATTTGCTTTCCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212959.2 |
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| CDS CAA 90 bp | AAAATGGCATTAATCAAGATAATAACAGGGTCGTATTCGATGTATTaGTCTACTGGTTTCTGGCAGGATTTGCAGATGGTTATCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KMALIKIITGSYSMY*STGFWQDLQMVILS Trigger: GCTCAAGATAACCATCTGCAAATCCTGCCAGAAACCAGTAGACAAATACATCGAATACGACCCTGTTATTATCTTGATTAATGCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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| CDS CAA 72 bp | TTAATCAAGATAATAACAGGGTCGTATTCGATGTATTaGTCTACTGGTTTCTGGCAGGATTTGCAGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: LIKIITGSYSMY*STGFWQDLQMV Trigger: AACCATCTGCAAATCCTGCCAGAAACCAGTAGACAAATACATCGAATACGACCCTGTTATTATCTTGATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034463.4 ENSMUST00000212036.2 |
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