Pregenerated sensors for ARTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028539Ensembl transcript IDs: ENSMUST00000070816.9, ENSMUST00000097913.9
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCGGCCTGGGGCCTGAGCTCTGCAGCCTCCATATCCTGCTGAGTTaGGGCTCCTGGTTAGTGAGGCCCGGTGGAGCTGTTCCAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: TGLGPELCSLHILLS*GSWLVRPGGAVPGR Trigger: CCTACCTGGAACAGCTCCACCGGGCCTCACTAACCAGGAGCCTCAACTCAGCAGGATATGGAGGCTGCAGAGCTCAGGCCCCAGGCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR TCA 90 bp | CTGTCTGTCATGCCGACGACGTCTGTCACTCACCGGCCTGGGGCCTaGGCTCTGCAGCCTCCATATCCTGCTGAGTTGAGGCTCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LSVMPTTSVTHRPGA*ALQPPYPAELRLLV Trigger: AACCAGGAGCCTCAACTCAGCAGGATATGGAGGCTGCAGAGCTCAGGCCCCAGGCCGGTGAGTGACAGACGTCGTCGGCATGACAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR CCA 90 bp | GCTTCGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTaGTCCAGCAACGCGACTACAATGTATATATGTATATATATCTCT | + |
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Preference number: 1 (lower is better) Translates to: ASASTSEHGTGFSTG*SSNATTMYICIYIS Trigger: AGAGATATATATACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR CCA 90 bp | TATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTaGATTCTCCCAGAGGAGTTCTCTTTAGCTGAGGTTTCTCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: YISLQNSFPRTEGHF*ILPEEFSLAEVSPV Trigger: GACAGGAGAAACCTCAGCTAAAGAGAACTCCTCTGGGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCCATATCCTGCTGAGTTaGGGCTCCTGGTTAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ASASTSEHGTGFSTGWSSHILLS*GSWLVR Trigger: CCTCACTAACCAGGAGCCTCAACTCAGCAGGATATG...GCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGGTTTCAGCACAGGCTGGTCCAGCAACGCGACTACAATGTATATATGTCTGTCTGTAGAGCTGTaGTCCATGAACAACTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTGFSTGWSSNATTMYICLSVEL*SMNNLG Trigger: TCCCAAGTTGTTCATGGATCACAGCTCTACAGACAG...ACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR TCA 90 bp | TGTATATATGTATATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATCATATCCTGCTGAGTTaGGGCTCCTGGTTAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CIYVYISLQNSFPRTEGHHILLS*GSWLVR Trigger: CCTCACTAACCAGGAGCCTCAACTCAGCAGGATATG...ATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATATATACATATATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTATATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGACTGTCTGTAGAGCTGTaGTCCATGAACAACTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: MYIYLFKIHSPGQRAISGLSVEL*SMNNLG Trigger: TCCCAAGTTGTTCATGGATCACAGCTCTACAGACAG...TCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATATATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR TCA 72 bp | ATGCCGACGACGTCTGTCACTCACCGGCCTGGGGCCTaGGCTCTGCAGCCTCCATATCCTGCTGAGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: MPTTSVTHRPGA*ALQPPYPAELR Trigger: CCTCAACTCAGCAGGATATGGAGGCTGCAGAGCTCAGGCCCCAGGCCGGTGAGTGACAGACGTCGTCGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR TCA 72 bp | GGGCCTGAGCTCTGCAGCCTCCATATCCTGCTGAGTTaGGGCTCCTGGTTAGTGAGGCCCGGTGGAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: GPELCSLHILLS*GSWLVRPGGAV Trigger: AACAGCTCCACCGGGCCTCACTAACCAGGAGCCTCAACTCAGCAGGATATGGAGGCTGCAGAGCTCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR GCA 72 bp | GGTCAGTGGTTCCGACATCTTTCACTCTGTCTGTCATaGCGACGACGTCTGTCACTCACCGGCCTGGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GQWFRHLSLCLS*RRRLSLTGLGP Trigger: AGGCCCCAGGCCGGTGAGTGACAGACGTCGTCGGCATGACAGACAGAGTGAAAGATGTCGGAACCACTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCAGGACAGAGGGCCATTTCTGGATTCTCCCAGAGGAGTTCTCTTTAGCTCCATATCCTGCTGAGTaGAGGCTCCTGGTTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPRTEGHFWILPEEFSLAPYPAE*RLLVSE Trigger: CTCACTAACCAGGAGCCTCAACTCAGCAGGATATGG...AGCTAAAGAGAACTCCTCTGGGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGTTCTCTTTAGCTGAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACCATATCCTGCTGAGTaGAGGCTCCTGGTTAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: EEFSLAEVSPVCRAVIHEPYPAE*RLLVSE Trigger: CTCACTAACCAGGAGCCTCAACTCAGCAGGATATGG...TTCATGGATCACAGCTCTACAGACAGGAGAAACCTCAGCTAAAGAGAACTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR CCA 72 bp | CTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTaGATTCTCCCAGAGGAGTTCTCTTTAGCTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: LQNSFPRTEGHF*ILPEEFSLAEV Trigger: AACCTCAGCTAAAGAGAACTCCTCTGGGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| 3UTR CCA 72 bp | TCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTaGTCCAGCAACGCGACTACAATGTATATATGTATA | + |
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Preference number: 3 (lower is better) Translates to: STSEHGTGFSTG*SSNATTMYICI Trigger: TATACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | CGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCAACGCTCACCGGCACCAGCTaGGAGCGCAGGCGGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RLPQVNTGLVSAQAGPATLTGTS*ERRRQP Trigger: CGGCTGCCGCCTGCGCTCGCAGCTGGTGCCGGTGAG...CGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | GCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCAACGCGCGGCCTCATAGCGAGTaGGCCGGCAGCAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTSEHGTGFSTGWSSNARPHSE*AGSRAG Trigger: GCCAGCCCTGCTGCCGGCCCACTCGCTATGAGGCCG...CGCGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR TCA 90 bp | GCTTCGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCGGTTGGCCACCAGGCTaGCTGCCACCTAGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASASTSEHGTGFSTGWSSGWPPG*LPPRPE Trigger: CTCCGGCCTAGGTGGCAGTCAGCCTGGTGGCCAACC...GCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCGAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCAACGAGCTCGTCGGAGCTGTaGCCTAGGCCGAGCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: RLPQVNTGLVSAQAGPATSSSEL*PRPSAL Trigger: GAGTGCGCTCGGCCTAGGCCACAGCTCCGACGAGCT...CGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | GCTTCGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCGCAGTGGCGGAGAGGTaGTCCACGGTCCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASASTSEHGTGFSTGWSSAVAER*STVLQV Trigger: CACCTGGAGGACCGTGGACCACCTCTCCGCCACTGC...GCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTCCATATCCTGCTGAGTTGAGGCTCCTGGTTAGTGAGGCCCGGTGGAGCGGCGGCACGAGCCGCTaGAGAAGCGGAAACGTATCA | + |
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Preference number: 4 (lower is better) Translates to: QPPYPAELRLLVSEARWSGGTSR*RSGNVS Trigger: TGATACGTTTCCGCTTCTGCAGCGGCTCGTGCCGCC...GCTCCACCGGGCCTCACTAACCAGGAGCCTCAACTCAGCAGGATATGGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR TCA 90 bp | GGGCTTCGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCACCAGGGAAGCTTCTGTaGCGCAGCTCAGCAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GLRLPQVNTGLVSAQAGPPGKLL*RSSAGL Trigger: TAGCCCTGCTGAGCTGCGTCACAGAAGCTTCCCTGG...TGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCGAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | GAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTGGGACTGTTGGTGCAGCGGGAGGAGACTaGAGCGCGGGACCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: EVSPVCRAVIHEQLGTVGAAGGD*SAGPGG Trigger: GCCGCCTGGTCCCGCGCTCCAGTCTCCTCCCGCTGC...ACCAACAGTCCCAAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | CGGCTTCCACAAGTGAACACGGGACTGGTTTCAGCACAGGCTGGTCCAGCAACGGAGGCAGTGGGACAATaGAGTAGGCTCTGCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RLPQVNTGLVSAQAGPATEAVGQ*SRLCKS Trigger: GGACTTGCAGAGCCTACTGCATTGTCCCACTGCCTC...CGTTGCTGGACCAGCCTGTGCTGAAACCAGTCCCGTGTTCACTTGTGGAAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR TCA 90 bp | ATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGATTCTCCGGCAGCAGGGCTGGCTaGTCGGCCGGGACCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IYLFKIHSPGQRAISGFSGSRAG*SAGTRE Trigger: CTCCCGGGTCCCGGCCGATCAGCCAGCCCTGCTGCC...GGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | CTGGTTTCAGCACAGGCTGGTCCAGCAACGCGACTACAATGTATATATGTATATGCAGCGGGAGGAGACTaGAGCGCGGGACCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LVSAQAGPATRLQCIYVYAAGGD*SAGPGG Trigger: GCCGCCTGGTCCCGCGCTCCAGTCTCCTCCCGCTGC...ATATACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | GAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTGGGACTGTTGGTGACAGCCGCAGGCAGTaGCGGAGAGGTGGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EVSPVCRAVIHEQLGTVGDSRRQ*RRGGPR Trigger: CCGTGGACCACCTCTCCGCCACTGCCTGCGGCTGTC...ACCAACAGTCCCAAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | ATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGATTCTCCCAGAGACAGCCGCAGGCAGTaGCGGAGAGGTGGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: ISSKFIPQDRGPFLDSPRDSRRQ*RRGGPR Trigger: CCGTGGACCACCTCTCCGCCACTGCCTGCGGCTGTC...TCTGGGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | ATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGATTCTCCACCAGGCGGCGGGGGTaGGGGCTGAGGAGACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: IYLFKIHSPGQRAISGFSTRRRG*GLRRLR Trigger: CCTCAGTCTCCTCAGCCCGCACCCCCGCCGCCTGGT...GGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | ATGTATATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGAACCAGGCGGCGGGGGTaGGGGCTGAGGAGACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: MYIYLFKIHSPGQRAISGTRRRG*GLRRLR Trigger: CCTCAGTCTCCTCAGCCCGCACCCCCGCCGCCTGGT...TCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATATATACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | TTCTCTTTAGCTGAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTAGCTCGTCGGAGCTGTaGCCTAGGCCGAGCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: FSLAEVSPVCRAVIHEQLSSSEL*PRPSAL Trigger: GAGTGCGCTCGGCCTAGGCCACAGCTCCGACGAGCT...AAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTCAGCTAAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR TCA 90 bp | CTGGTTTCAGCACAGGCTGGTCCAGCAACGCGACTACAATGTATATATGTATATCCAGGGAAGCTTCTGTaGCGCAGCTCAGCAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LVSAQAGPATRLQCIYVYPGKLL*RSSAGL Trigger: TAGCCCTGCTGAGCTGCGTCACAGAAGCTTCCCTGG...ATATACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | GAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTGGGACTGTTGGTGAGGCAGTGGGACAATaGAGTAGGCTCTGCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: EVSPVCRAVIHEQLGTVGEAVGQ*SRLCKS Trigger: GGACTTGCAGAGCCTACTGCATTGTCCCACTGCCTC...ACCAACAGTCCCAAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CCA 90 bp | TATATATCTCTTCAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGATTCTCGCAGTGGCGGAGAGGTaGTCCACGGTCCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: YISLQNSFPRTEGHFWILAVAER*STVLQV Trigger: CACCTGGAGGACCGTGGACCACCTCTCCGCCACTGC...GAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTGAAGAGATATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR GCA 90 bp | GGTTTCAGCACAGGCTGGTCCAGCAACGCGACTACAATGTATATATGTATATATGGCGGCACGAGCCGCTaGAGAAGCGGAAACGTATCA | + |
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Preference number: 4 (lower is better) Translates to: GFSTGWSSNATTMYICIYGGTSR*RSGNVS Trigger: TGATACGTTTCCGCTTCTGCAGCGGCTCGTGCCGCC...ATATATACATATATACATTGTAGTCGCGTTGCTGGACCAGCCTGTGCTGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | GCGAGCGCAGGCGGCAGCCGCGCGCATCTGTGGTCCGTGCGCGGCTaGTCCGGGTTCCTGCACGCGCCGCGCGTGCCCCGCGGAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASAGGSRAHLWSVRG*SGFLHAPRVPRGAQ Trigger: CTGCGCTCCGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | CACCAGCTGCGAGCGCAGGCGGCAGCCGCGCGCATCTGTGGTCCGTaGGCGGCTGCTCCGGGTTCCTGCACGCGCCGCGCGTGCCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: HQLRAQAAAARICGP*AAAPGSCTRRACPA Trigger: CGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCGCAGCTGGTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | TGTGGTCCGTGCGCGGCTGCTCCGGGTTCCTGCACGCGCCGCGCGTaGCCCGCGGAGCGCAGCGGGAGGAGACTGGAGCGCGGGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: CGPCAAAPGSCTRRA*PAERSGRRLERGTR Trigger: CCTGGTCCCGCGCTCCAGTCTCCTCCCGCTGCGCTCCGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | GCAGCCGCGCGCATCTGTGGTCCGTGCGCGGCTGCTCCGGGTTCCTaGACGCGCCGCGCGTGCCCCGCGGAGCGCAGCGGGAGGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: AAARICGPCAAAPGS*TRRACPAERSGRRL Trigger: CAGTCTCCTCCCGCTGCGCTCCGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 90 bp | TCACCGGCACCAGCTGCGAGCGCAGGCGGCAGCCGCGCGCATCTGTaGTCCGTGCGCGGCTGCTCCGGGTTCCTGCACGCGCCGCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SPAPAASAGGSRAHL*SVRGCSGFLHAPRV Trigger: CACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCGCAGCTGGTGCCGGTGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | TCGTCGGAGCTGTGGCCTAGGCCGAGCGCACTCACCGGCACCAGCTaGGAGCGCAGGCGGCAGCCGCGCGCATCTGTGGTCCGTGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SSELWPRPSALTGTS*ERRRQPRASVVRAR Trigger: CCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCGCAGCTGGTGCCGGTGAGTGCGCTCGGCCTAGGCCACAGCTCCGACGA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS TCA 90 bp | CGGGAGGCGACCGTAGGGCCCCAGCGCCCAGTAGGCTGGCCAGACTaGGATCGTGCTGGGAGCGTGCTCGGCGGCACGAGCCGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: REATVGPQRPVGWPD*DRAGSVLGGTSRCR Trigger: TCTGCAGCGGCTCGTGCCGCCGAGCACGCTCCCAGCACGATCTCAGTCTGGCCAGCCTACTGGGCGCTGGGGCCCTACGGTCGCCTCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | GACCGTAGGGCCCCAGCGCCCAGTAGGCTGGCCAGACTGAGATCGTaGTGGGAGCGTGCTCGGCGGCACGAGCCGCTGCAGAAGCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: DRRAPAPSRLARLRS*WERARRHEPLQKRK Trigger: TTTCCGCTTCTGCAGCGGCTCGTGCCGCCGAGCACGCTCCCAGCACGATCTCAGTCTGGCCAGCCTACTGGGCGCTGGGGCCCTACGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 90 bp | CGTAGGGCCCCAGCGCCCAGTAGGCTGGCCAGACTGAGATCGTGCTaGGAGCGTGCTCGGCGGCACGAGCCGCTGCAGAAGCGGAAACGT | + |
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Preference number: 5 (lower is better) Translates to: RRAPAPSRLARLRSC*ERARRHEPLQKRKR Trigger: ACGTTTCCGCTTCTGCAGCGGCTCGTGCCGCCGAGCACGCTCCCAGCACGATCTCAGTCTGGCCAGCCTACTGGGCGCTGGGGCCCTACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | GTGCGGGCTGAGGAGACTGAGGCGGGGGTCGCAGGGTTCTTTCGCTaGACAAATGCGCAGTGTGTCCCCCAGGCAGGTGGTCCGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VRAEETEAGVAGFFR*TNAQCVPQAGGPWG Trigger: CCCCCACGGACCACCTGCCTGGGGGACACACTGCGCATTTGTGCAGCGAAAGAACCCTGCGACCCCCGCCTCAGTCTCCTCAGCCCGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 90 bp | CACGAGCCGCTGCAGAAGCGGAAACGTATCAGCTCGTCGGAGCTGTaGCCTAGGCCGAGCGCACTCACCGGCACCAGCTGCGAGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HEPLQKRKRISSSEL*PRPSALTGTSCERR Trigger: CCTGCGCTCGCAGCTGGTGCCGGTGAGTGCGCTCGGCCTAGGCCACAGCTCCGACGAGCTGATACGTTTCCGCTTCTGCAGCGGCTCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS TCA 90 bp | TGGCGGAGAGGTGGTCCACGGTCCTCCAGGTGCTGTTCACGTCCATaGAGGAGACGGCCTCATAGCGAGTGGGCCGGCAGCAGGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: WRRGGPRSSRCCSRP*RRRPHSEWAGSRAG Trigger: GCCAGCCCTGCTGCCGGCCCACTCGCTATGAGGCCGTCTCCTTCATGGACGTGAACAGCACCTGGAGGACCGTGGACCACCTCTCCGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 90 bp | CAGCTCAGCAGGGCTAGAACAGCTAGGGTTGGCCACCAGGCTGACTaGCACCTAGGCCGGAGGCAGTGGGACAATGCAGTAGGCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QLSRARTARVGHQAD*HLGRRQWDNAVGSA Trigger: TGCAGAGCCTACTGCATTGTCCCACTGCCTCCGGCCTAGGTGGCAGTCAGCCTGGTGGCCAACCCTAGCTGTTCTAGCCCTGCTGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CAA 90 bp | CAAAATTCATTCCCCAGGACAGAGGGCCATTTCTGGATTCTCCCAGAGGAGTTCCGGGGCTGCGGGACATaGGGTCCAGGGAAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QNSFPRTEGHFWILPEEFRGCGT*GPGKLL Trigger: CAGAAGCTTCCCTGGACCCAATGTCCCGCAGCCCCG...GAACTCCTCTGGGAGAATCCAGAAATGGCCCTCTGTCCTGGGGAATGAATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CAA 90 bp | GAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTGGGACTGTTGGTCTAGAACAGCTAGGGTaGGCCACCAGGCTGACTGCC | + |
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Preference number: 5 (lower is better) Translates to: EVSPVCRAVIHEQLGTVGLEQLG*ATRLTA Trigger: GGCAGTCAGCCTGGTGGCCAACCCTAGCTGTTCTAG...ACCAACAGTCCCAAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGTTCTCTTTAGCTGAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACTAGAACAGCTAGGGTaGGCCACCAGGCTGACTGCC | + |
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Preference number: 5 (lower is better) Translates to: EEFSLAEVSPVCRAVIHELEQLG*ATRLTA Trigger: GGCAGTCAGCCTGGTGGCCAACCCTAGCTGTTCTAG...TTCATGGATCACAGCTCTACAGACAGGAGAAACCTCAGCTAAAGAGAACTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTAGCTGAGGTTTCTCCTGTCTGTAGAGCTGTGATCCATGAACAACTTCGGGGCTGCGGGACATaGGGTCCAGGGAAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: FSLAEVSPVCRAVIHEQLRGCGT*GPGKLL Trigger: CAGAAGCTTCCCTGGACCCAATGTCCCGCAGCCCCG...AAGTTGTTCATGGATCACAGCTCTACAGACAGGAGAAACCTCAGCTAAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 72 bp | TGCGCGGCTGCTCCGGGTTCCTGCACGCGCCGCGCGTaGCCCGCGGAGCGCAGCGGGAGGAGACTGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CAAAPGSCTRRA*PAERSGRRLER Trigger: GCGCTCCAGTCTCCTCCCGCTGCGCTCCGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 72 bp | CGCATCTGTGGTCCGTGCGCGGCTGCTCCGGGTTCCTaGACGCGCCGCGCGTGCCCCGCGGAGCGCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RICGPCAAAPGS*TRRACPAERSG Trigger: CCCGCTGCGCTCCGCGGGGCACGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 72 bp | CGAGCGCAGGCGGCAGCCGCGCGCATCTGTGGTCCGTaGGCGGCTGCTCCGGGTTCCTGCACGCGCCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RAQAAAARICGP*AAAPGSCTRRA Trigger: CGCGCGGCGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 72 bp | CCAGCTGCGAGCGCAGGCGGCAGCCGCGCGCATCTGTaGTCCGTGCGCGGCTGCTCCGGGTTCCTGCACGCG | + |
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Preference number: 6 (lower is better) Translates to: PAASAGGSRAHL*SVRGCSGFLHA Trigger: CGCGTGCAGGAACCCGGAGCAGCCGCGCACGGACCACAGATGCGCGCGGCTGCCGCCTGCGCTCGCAGCTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS TCA 72 bp | ACCGTAGGGCCCCAGCGCCCAGTAGGCTGGCCAGACTaGGATCGTGCTGGGAGCGTGCTCGGCGGCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: TVGPQRPVGWPD*DRAGSVLGGTS Trigger: GCTCGTGCCGCCGAGCACGCTCCCAGCACGATCTCAGTCTGGCCAGCCTACTGGGCGCTGGGGCCCTACGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 72 bp | ACAAATGCGCAGTGTGTCCCCCAGGCAGGTGGTCCGTaGGGGGCGCCAAGACCGGTGAGGGACCGTCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TNAQCVPQAGGP*GAPRPVRDRRE Trigger: CTCGCGACGGTCCCTCACCGGTCTTGGCGCCCCCCACGGACCACCTGCCTGGGGGACACACTGCGCATTTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 72 bp | CCAGCGCCCAGTAGGCTGGCCAGACTGAGATCGTGCTaGGAGCGTGCTCGGCGGCACGAGCCGCTGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PAPSRLARLRSC*ERARRHEPLQK Trigger: CTTCTGCAGCGGCTCGTGCCGCCGAGCACGCTCCCAGCACGATCTCAGTCTGGCCAGCCTACTGGGCGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS TCA 72 bp | GGTGGTCCACGGTCCTCCAGGTGCTGTTCACGTCCATaGAGGAGACGGCCTCATAGCGAGTGGGCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGPRSSRCCSRP*RRRPHSEWAGS Trigger: GCTGCCGGCCCACTCGCTATGAGGCCGTCTCCTTCATGGACGTGAACAGCACCTGGAGGACCGTGGACCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 72 bp | GATCGTGCTGGGAGCGTGCTCGGCGGCACGAGCCGCTaGAGAAGCGGAAACGTATCAGCTCGTCGGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DRAGSVLGGTSR*RSGNVSARRSC Trigger: ACAGCTCCGACGAGCTGATACGTTTCCGCTTCTGCAGCGGCTCGTGCCGCCGAGCACGCTCCCAGCACGATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS CCA 72 bp | CTGCAGAAGCGGAAACGTATCAGCTCGTCGGAGCTGTaGCCTAGGCCGAGCGCACTCACCGGCACCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQKRKRISSSEL*PRPSALTGTSC Trigger: GCAGCTGGTGCCGGTGAGTGCGCTCGGCCTAGGCCACAGCTCCGACGAGCTGATACGTTTCCGCTTCTGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS GCA 72 bp | GAGGAGACTGAGGCGGGGGTCGCAGGGTTCTTTCGCTaGACAAATGCGCAGTGTGTCCCCCAGGCAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: EETEAGVAGFFR*TNAQCVPQAGG Trigger: ACCACCTGCCTGGGGGACACACTGCGCATTTGTGCAGCGAAAGAACCCTGCGACCCCCGCCTCAGTCTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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| CDS TCA 72 bp | CGGGGCTGCGGGACATTGGGTCCAGGGAAGCTTCTGTaGCGCAGCTCAGCAGGGCTAGAACAGCTAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGCGTLGPGKLL*RSSAGLEQLGL Trigger: CAACCCTAGCTGTTCTAGCCCTGCTGAGCTGCGTCACAGAAGCTTCCCTGGACCCAATGTCCCGCAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070816.9 ENSMUST00000097913.9 |
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