Pregenerated sensors for ART4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030217Ensembl transcript IDs: ENSMUST00000032341.3
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGGGATGTTCTaGCCTTGTCTGTCAGGACTCCCATCTCCTCTCCTGGAAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: KTGLGRKNLHRAGMF*PCLSGLPSPLLEES Trigger: GCTCTCTTCCAGGAGAGGAGATGGGAGTCCTGACAGACAAGGGCAGAACATCCCTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 90 bp | ATGGCTTTCAGTAGCAGTGTGCTGAAGGCCCTTTTCAGTTCTGGTTaGCTGGCTGCAGGAGAGTGGTCCTTTGTGAGGTTCCTGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MAFSSSVLKALFSSG*LAAGEWSFVRFLRR Trigger: CCTCCTCAGGAACCTCACAAAGGACCACTCTCCTGCAGCCAGCCAACCAGAACTGAAAAGGGCCTTCAGCACACTGCTACTGAAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR TCA 90 bp | CCCTTGTCTGTCAGGACTCCCATCTCCTCTCCTGGAAGAGAGCGCTaGACACTAAGACCTTGCTGTGGTTTGAAGGTTAAATGTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PLSVRTPISSPGRER*TLRPCCGLKVKCAS Trigger: TGAGGCACATTTAACCTTCAAACCACAGCAAGGTCTTAGTGTTCAGCGCTCTCTTCCAGGAGAGGAGATGGGAGTCCTGACAGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 90 bp | ATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTTaGGTGTCTTCACTGAATAAGACCAAGGCCCTGAGACTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: ILSWISGQVMGKWYP*VSSLNKTKALRLGR Trigger: CCTTCCCAGTCTCAGGGCCTTGGTCTTATTCAGTGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 90 bp | GTATCTGCTTCTGTAGTGCCTGGTGCTGCTGGGACCAAACACTTCTaGTCTACGATGTTCTGTAAGTTTATAAGTGGAAGCAAAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: VSASVVPGAAGTKHF*STMFCKFISGSKAF Trigger: GAAAGCTTTGCTTCCACTTATAAACTTACAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 90 bp | CTGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATGGATCTCTaGCCAAGTAATGGGCAAGTGGTATCCTTGGGTGTCTTCACTGAA | + |
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Preference number: 1 (lower is better) Translates to: LSHMLPQDCHFVMDL*PSNGQVVSLGVFTE Trigger: TTCAGTGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGCAGAGCAAAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGGGATGCTTCTGTAGTGCCTaGTGCTGCTGGGACCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RRAEQRRVWVGKTFTEQGCFCSA*CCWDQT Trigger: TGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCA...TCCCTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGAGGGCAGAGCAAAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGTCCCATCTCCTCTCCTaGAAGAGAGCGCTGAACACT | + |
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Preference number: 2 (lower is better) Translates to: LRRAEQRRVWVGKTFTEQSHLLS*KRALNT Trigger: AGTGTTCAGCGCTCTCTTCCAGGAGAGGAGATGGGA...CTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGGCCCAGTTTGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCTGTTTCCCTGGAAGAGAGCGCTaGACACTAAGACCTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VQAQFGARGSSCLSSLCFPGRER*TLRPCC Trigger: ACAGCAAGGTCTTAGTGTTCAGCGCTCTCTTCCAGG...GAAACAGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGTTCAGGCCCAGTTTGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCTATAAGACCAAGGCCCTaGGACTGGGAAGGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: IWFRPSLALEAHLAYLLSIRPRP*DWEGQM Trigger: CATTTGCCCTTCCCAGTCTCAGGGCCTTGGTCTTAT...AGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAACCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGGCCCAGTTTGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCTGTTTCCTTTTCAGTTCTGGTTaGCTGGCTGCAGGAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VQAQFGARGSSCLSSLCFLFSSG*LAAGEW Trigger: CCACTCTCCTGCAGCCAGCCAACCAGAACTGAAAAG...GAAACAGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | CCACAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTAGGCCCTTTTCAGTTCTaGTTGGCTGGCTGCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PQDCHFVMDLWPSNGQVVGPFQF*LAGCRR Trigger: TCTCCTGCAGCCAGCCAACCAGAACTGAAAAGGGCC...TACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGGCCCAGTTTGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCTGTTTCCAAGTAATGGGCAAGTaGTATCCTTGGGTGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VQAQFGARGSSCLSSLCFQVMGK*YPWVSS Trigger: TGAAGACACCCAAGGATACCACTTGCCCATTACTTG...GAAACAGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTAGCAAGGAAGACGCCATaGATGGCTTTCAGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQDCHFVMDLWPSNGQVVARKTP*MAFSSS Trigger: ACTGCTACTGAAAGCCATGCATGGCGTCTTCCTTGC...TACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | AAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTCTTGCACATCTTCTGTaGTATTGTGGGAAGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KIVILSWISGQVMGKWYPLAHLL*YCGKCG Trigger: CCCACACTTCCCACAATACCACAGAAGATGTGCAAG...AGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR TCA 90 bp | TATCCTAATTCTGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATGGATCTGCAAAGCTTTCATCCTaGACTTTGTTTGAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YPNSVSYAATRLSFCHGSAKLSS*TLFELL Trigger: CAGAAGCTCAAACAAAGTTCAGGATGAAAGCTTTGC...AGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACAGAATTAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CCA 90 bp | TATCCTAATTCTGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATGGATCTTTTGTCTCCTTCTGGTaGTGTTATTTTTCGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YPNSVSYAATRLSFCHGSFVSFW*CYFSWL Trigger: CAGCCACGAAAAATAACACCACCAGAAGGAGACAAA...AGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACAGAATTAGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | TCTGCCCTTGTCTGTCAGGACTCCCATCTCCTCTCCTaGAAGAGAGCGCTGAACACTAAGACCTTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SALVCQDSHLLS*KRALNTKTLLW Trigger: CCACAGCAAGGTCTTAGTGTTCAGCGCTCTCTTCCAGGAGAGGAGATGGGAGTCCTGACAGACAAGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR GCA 72 bp | GGGCAGGCCTTGAGATTTGATAGTCTGCCTGGTATCTaGTTCTGTAGTGCCTGGTGCTGCTGGGACCAAACA | + |
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Preference number: 3 (lower is better) Translates to: GQALRFDSLPGI*FCSAWCCWDQT Trigger: TGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCAGATACCAGGCAGACTATCAAATCTCAAGGCCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | GGTGTTATTTTTCGTGGCTGTAGAGTCTTCCGGAGGTaGAGCCTTGCTGGAGGAAGTGAGTCACAAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GVIFRGCRVFRR*SLAGGSESQGA Trigger: TGCCCCTTGTGACTCACTTCCTCCAGCAAGGCTCCACCTCCGGAAGACTCTACAGCCACGAAAAATAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | GTGAGGTTCCTGAGGAGGGCAGAGCAAAGACGGGTCTaGGTAGGAAAAACCTTCACAGAGCAGGGATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: VRFLRRAEQRRV*VGKTFTEQGCS Trigger: AGAACATCCCTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCTCAGGAACCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | AGTAGCAGTGTGCTGAAGGCCCTTTTCAGTTCTGGTTaGCTGGCTGCAGGAGAGTGGTCCTTTGTGAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SSSVLKALFSSG*LAAGEWSFVRF Trigger: GAACCTCACAAAGGACCACTCTCCTGCAGCCAGCCAACCAGAACTGAAAAGGGCCTTCAGCACACTGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGAGGGCAGAGCAAAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGACATCTTCTGTGGTATaGTGGGAAGTGTGGGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: LRRAEQRRVWVGKTFTEQTSSVV*WEVWAS Trigger: TGAGGCCCACACTTCCCACAATACCACAGAAGATGT...CTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTTGGGTGTCTTCATCCGGAGGTGGAGCCTaGCTGGAGGAAGTGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LSWISGQVMGKWYPWVSSSGGGA*LEEVSH Trigger: GTGACTCACTTCCTCCAGCAAGGCTCCACCTCCGGA...TGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR GCA 72 bp | AGTCTGCCTGGTATCTGCTTCTGTAGTGCCTGGTGCTaGTGGGACCAAACACTTCTGGTCTACGATGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SLPGICFCSAWC*WDQTLLVYDVL Trigger: CAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCAGATACCAGGCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR GCA 72 bp | GATAGTCTGCCTGGTATCTGCTTCTGTAGTGCCTGGTaGTGCTGGGACCAAACACTTCTGGTCTACGATGTT | + |
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Preference number: 3 (lower is better) Translates to: DSLPGICFCSAW*CWDQTLLVYDV Trigger: AACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCAGATACCAGGCAGACTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR TCA 72 bp | GTCAGGACTCCCATCTCCTCTCCTGGAAGAGAGCGCTaGACACTAAGACCTTGCTGTGGTTTGAAGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VRTPISSPGRER*TLRPCCGLKVK Trigger: TTTAACCTTCAAACCACAGCAAGGTCTTAGTGTTCAGCGCTCTCTTCCAGGAGAGGAGATGGGAGTCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | TTTGATAGTCTGCCTGGTATCTGCTTCTGTAGTGCCTaGTGCTGCTGGGACCAAACACTTCTGGTCTACGAT | + |
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Preference number: 3 (lower is better) Translates to: FDSLPGICFCSA*CCWDQTLLVYD Trigger: ATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCACTACAGAAGCAGATACCAGGCAGACTATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTTGGGTGTCTTCATATTTAGGCCTAGATTaGAACTTAGGGTTGTCCCCG | + |
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Preference number: 3 (lower is better) Translates to: LSWISGQVMGKWYPWVSSYLGLD*NLGLSP Trigger: CGGGGACAACCCTAAGTTCAAATCTAGGCCTAAATA...TGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | TCTGTAGTGCCTGGTGCTGCTGGGACCAAACACTTCTaGTCTACGATGTTCTGTAAGTTTATAAGTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SVVPGAAGTKHF*STMFCKFISGS Trigger: GCTTCCACTTATAAACTTACAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCACTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | ATGCTGCCACAAGATTGTCATTTTGTCATGGATCTCTaGCCAAGTAATGGGCAAGTGGTATCCTTGGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: MLPQDCHFVMDL*PSNGQVVSLGV Trigger: GACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGGCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CAA 90 bp | CCACAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTACATGTGTTGAGATCTTaGTCTCCTTCTGGTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PQDCHFVMDLWPSNGQVVHVLRS*SPSGGV Trigger: AACACCACCAGAAGGAGACAAAGATCTCAACACATG...TACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | CCCATGAACTTTTCTTGCACATCTTCTGTGGTATTGTaGGAAGTGTGGGCCTCAGACTTTGGTAACACAAAT | + |
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Preference number: 3 (lower is better) Translates to: PMNFSCTSSVVL*EVWASDFGNTN Trigger: ATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATACCACAGAAGATGTGCAAGAAAAGTTCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CCA 72 bp | TGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATaGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCT | + |
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Preference number: 3 (lower is better) Translates to: CLICCHKIVILS*ISGQVMGKWYP Trigger: AGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCCCCCATGAACTTTTCTaGCACATCTTCTGTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: QDCHFVMDLWPSNGQVVSPHELF*HIFCGI Trigger: AATACCACAGAAGATGTGCAAGAAAAGTTCATGGGG...GGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR TCA 90 bp | AGGAGGGCAGAGCAAAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGGGACAGCAGCTGGATGGCTaGGGTGAGGTAGTAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRAEQRRVWVGKTFTEQGQQLDG*GEVVVQ Trigger: CTGCACTACTACCTCACCTCAGCCATCCAGCTGCTG...TCCCTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR GCA 90 bp | TCTTTGTCTCCTTCTGGTGGTGTTATTTTTCGTGGCTGTAGAGTCTTCCGGAGGAGCAGCAGGGTGAGCTaGCCTCCTGGAAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SLSPSGGVIFRGCRVFRRSSRVS*PPGSHS Trigger: GCTGTGGCTTCCAGGAGGGCAGCTCACCCTGCTGCT...CCTCCGGAAGACTCTACAGCCACGAAAAATAACACCACCAGAAGGAGACAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | TTTCTTGCACATCTTCTGTGGTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTACCGCAGCCCTGGCCATaGCCTTGGCCAAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FLAHLLWYCGKCGPQTLVPQPWP*PWPSQS Trigger: GCTCTGACTTGGCCAAGGCCATGGCCAGGGCTGCGG...TACCAAAGTCTGAGGCCCACACTTCCCACAATACCACAGAAGATGTGCAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CAA 72 bp | GCCTTGCTGGAGGAAGTGAGTCACAAGGGGCAGGCCTaGAGATTTGATAGTCTGCCTGGTATCTGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALLEEVSHKGQA*RFDSLPGICFC Trigger: ACAGAAGCAGATACCAGGCAGACTATCAAATCTCAAGGCCTGCCCCTTGTGACTCACTTCCTCCAGCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | AAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTCCCGCGGGTGTCTGCTaGACCCAGAGCAGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KIVILSWISGQVMGKWYPPAGVC*TQSSSS Trigger: GCTGCTACTGCTCTGGGTCCAGCAGACACCCGCGGG...AGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR GCA 90 bp | ATCTGGTTCAGGCCCAGTTTGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCTCTGAGAGAGAAGTCTTaGACAGAGGCACCCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: IWFRPSLALEAHLAYLLSLREKS*TEAPRQ Trigger: TTGTCTGGGTGCCTCTGTGCAAGACTTCTCTCTCAG...AGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAACCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR TCA 90 bp | AGGAGGGCAGAGCAAAGACGGGTCTGGGTAGGAAAAACCTTCACAGAGCAGGGACTACAGCCTTGGTATTaGTCATCAAAGGAATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RRAEQRRVWVGKTFTEQGLQPWY*SSKESG Trigger: ACCTGATTCCTTTGATGATCAATACCAAGGCTGTAG...TCCCTGCTCTGTGAAGGTTTTTCCTACCCAGACCCGTCTTTGCTCTGCCCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | TTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCTTGGGTGTCTTCAGAGGCAGAGAGGAACTaGCCGAATCGAATGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LSWISGQVMGKWYPWVSSEAERN*PNRMVE Trigger: TTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTC...TGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | TGCCTGGTGCTGCTGGGACCAAACACTTCTGGTCTACGATGTTCTGTAAGTTTATGGTGGAACCTACGTTaGCTCCAATGCTCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: CLVLLGPNTSGLRCSVSLWWNLR*LQCSHP Trigger: AGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCA...TAAACTTACAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGGTGGTGTTATTTTTCGTGGCTGTAGAGTCTTCCGGAGGTGGAGCCTTGCAAGCTTTTAGCAGCTaGCAGTTATACGTGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: LLVVLFFVAVESSGGGALQAFSS*QLYVLM Trigger: CATGAGCACGTATAACTGCCAGCTGCTAAAAGCTTG...CAAGGCTCCACCTCCGGAAGACTCTACAGCCACGAAAAATAACACCACCAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR TCA 90 bp | CAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCGCTGGATGGCTGAGGTaGGGTAGTAGTGCAGATACT | + |
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Preference number: 4 (lower is better) Translates to: QDCHFVMDLWPSNGQVVSAGWLR*GSSADT Trigger: AGTATCTGCACTACTACCTCACCTCAGCCATCCAGC...GGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR TCA 90 bp | TCTTTGTCTCCTTCTGGTGGTGTTATTTTTCGTGGCTGTAGAGTCTTCCGGAGGTCAAGACTTCCTTCCTaGGAGAGAAGTCTTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SLSPSGGVIFRGCRVFRRSRLPS*ERSLAQ Trigger: CTGTGCAAGACTTCTCTCTCAGGAAGGAAGTCTTGA...CCTCCGGAAGACTCTACAGCCACGAAAAATAACACCACCAGAAGGAGACAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR GCA 90 bp | TTTCTTGCACATCTTCTGTGGTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAGCCAGTAGATTCCTTTaGGCTCTGCTTTTGGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLAHLLWYCGKCGPQTLVASRFL*ALLLDE Trigger: CTCGTCCAAAAGCAGAGCGCAAAGGAATCTACTGGC...TACCAAAGTCTGAGGCCCACACTTCCCACAATACCACAGAAGATGTGCAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | TATCCTAATTCTGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATGGATCTGGGAGGGCCTTTGCCTaGTTCAGCCAGGTTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YPNSVSYAATRLSFCHGSGRAFA*FSQVRW Trigger: CCACCTAACCTGGCTGAACCAGGCAAAGGCCCTCCC...AGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACAGAATTAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CAA 72 bp | AAAATGATGAAGCTGACTATCTGGTTCAGGCCCAGTTaGGCGCTAGAGGCTCATCTTGCCTATCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMMKLTIWFRPS*ALEAHLAYLLS Trigger: AGAGAGAAGATAGGCAAGATGAGCCTCTAGCGCCAAACTGGGCCTGAACCAGATAGTCAGCTTCATCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR TCA 90 bp | TCTGTGGTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAACACAAATAGGAGCAGTAGTGCAGATACTTaGAGTGGAATGACTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVVLWEVWASDFGNTNRSSSADT*SGMTDC Trigger: ACAGTCAGTCATTCCACTTCAAGTATCTGCACTACT...GCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATACCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR GCA 90 bp | TTGCTGACAGCAACAGGAAAAAGTAGCCTAAATCCTTTTAGGCAGGGATTTCTGCTACGTTGGCTCCAATaGTCACATCCTTCATCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLTATGKSSLNPFRQGFLLRWLQ*SHPSSR Trigger: ACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAG...CAGAAATCCCTGCCTAAAAGGATTTAGGCTACTTTTTCCTGTTGCTGTCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | CCACAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTAATGGTAAACAGGGTTTaGTTTCCAGACACCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQDCHFVMDLWPSNGQVVMVNRV*FPDTRV Trigger: GACACGGGTGTCTGGAAACCAAACCCTGTTTACCAT...TACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| 3UTR CAA 72 bp | CTTCTGTGGTATTGTGGGAAGTGTGGGCCTCAGACTTaGGTAACACAAATAGGAGCATCAAATTTAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLWYCGKCGPQT*VTQIGASNLSS Trigger: GCTGCTTAAATTTGATGCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATACCACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR GCA 90 bp | TATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAACACAAATAGGAGCATCAAATGTGGGCTTTTTGCCATaGTCTGGAGTAATACTTATG | + |
|
Preference number: 4 (lower is better) Translates to: YCGKCGPQTLVTQIGASNVGFLP*SGVILM Trigger: CATAAGTATTACTCCAGAGCATGGCAAAAAGCCCAC...ATTTGATGCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CCA 90 bp | GTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAACACAAATAGGAGCATCAAACTTTTTGCCATGCTCTaGAGTAATACTTATGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLWEVWASDFGNTNRSIKLFAML*SNTYEY Trigger: ATACTCATAAGTATTACTCCAGAGCATGGCAAAAAG...TTTGATGCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 90 bp | CCAGACACCCGTGTCTCTTCCTTTAGCAGGGAGGCAGAGAGGAACTaGCCGAATCGAATGGTGGAACCTACGTTGGCTCCAATGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PDTRVSSFSREAERN*PNRMVEPTLAPMLT Trigger: TGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGCTAAAGGAAGAGACACGGGTGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 90 bp | GGGAGGCAGAGAGGAACTGGCCGAATCGAATGGTGGAACCTACGTTaGCTCCAATGCTCACATCCTTCATCCCGTGGTACACCTTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQRGTGRIEWWNLR*LQCSHPSSRGTPCN Trigger: GTTACAAGGTGTACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 90 bp | CTTCCTTTAGCAGGGAGGCAGAGAGGAACTGGCCGAATCGAATGGTaGAACCTACGTTGGCTCCAATGCTCACATCCTTCATCCCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLAGRQRGTGRIEW*NLRWLQCSHPSSRG Trigger: ACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGCTAAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 90 bp | TCTCTTCCTTTAGCAGGGAGGCAGAGAGGAACTGGCCGAATCGAATaGTGGAACCTACGTTGGCTCCAATGCTCACATCCTTCATCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLAGRQRGTGRIE*WNLRWLQCSHPSSR Trigger: ACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGCTAAAGGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 90 bp | ACCACTGGAGCAGGGGCGCACTTCTTGCTGCAAGCTTTTAGCAGCTaGCAGTTATACGTGCTCATGTTCCCAGCAGACCGCAAGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: TTGAGAHFLLQAFSS*QLYVLMFPADRKFI Trigger: GATAAACTTGCGGTCTGCTGGGAACATGAGCACGTATAACTGCCAGCTGCTAAAAGCTTGCAGCAAGAAGTGCGCCCCTGCTCCAGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 90 bp | AGAGGAACTGGCCGAATCGAATGGTGGAACCTACGTTGGCTCCAATaGTCACATCCTTCATCCCGTGGTACACCTTGTAACACAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGTGRIEWWNLRWLQ*SHPSSRGTPCNTDC Trigger: GCAGTCTGTGTTACAAGGTGTACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | GTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAACACAAATAGGAGCATCAAAGCCCTGGCCATGGCCTaGGCCAAGTCAGAGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VLWEVWASDFGNTNRSIKALAMA*AKSELT Trigger: TGTGAGCTCTGACTTGGCCAAGGCCATGGCCAGGGC...TTTGATGCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | TGCCTGGTGCTGCTGGGACCAAACACTTCTGGTCTACGATGTTCTGTAAGTTTACCTGAGAGAGAAGTCTaGCACAGAGGCACCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLVLLGPNTSGLRCSVSLPEREV*HRGTQT Trigger: TGTCTGGGTGCCTCTGTGCAAGACTTCTCTCTCAGG...TAAACTTACAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 90 bp | GGGCGCACTTCTTGCTGCAAGCTTTTAGCAGCTGGCAGTTATACGTaGTCATGTTCCCAGCAGACCGCAAGTTTATCAAATCTCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTSCCKLLAAGSYT*SCSQQTASLSNLLW Trigger: CCAAAGGAGATTTGATAAACTTGCGGTCTGCTGGGAACATGAGCACGTATAACTGCCAGCTGCTAAAAGCTTGCAGCAAGAAGTGCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | TGCCTGGTGCTGCTGGGACCAAACACTTCTGGTCTACGATGTTCTGTAAGTTTAAATGGTAAACAGGGTTaGGTTTCCAGACACCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLVLLGPNTSGLRCSVSLNGKQG*VSRHPC Trigger: ACACGGGTGTCTGGAAACCAAACCCTGTTTACCATT...TAAACTTACAGAACATCGTAGACCAGAAGTGTTTGGTCCCAGCAGCACCAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | CAAGATTGTCATTTTGTCATGGATCTCTGGCCAAGTAATGGGCAAGTGGTATCCGCTACAGCCTTGGTATaGATCATCAAAGGAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QDCHFVMDLWPSNGQVVSATALV*IIKGIR Trigger: CCTGATTCCTTTGATGATCAATACCAAGGCTGTAGC...GGATACCACTTGCCCATTACTTGGCCAGAGATCCATGACAAAATGACAATCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | GTATTGTGGGAAGTGTGGGCCTCAGACTTTGGTAACACAAATAGGAGCATCAAAAAGTCAGAGCTCACATaGAGATTCAGGGTGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VLWEVWASDFGNTNRSIKKSELT*RFRVKT Trigger: GGTTTTCACCCTGAATCTCAATGTGAGCTCTGACTT...TTTGATGCTCCTATTTGTGTTACCAAAGTCTGAGGCCCACACTTCCCACAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS TCA 90 bp | TTTGCCATGCTCTGGAGTAATACTTATGAGTATCTACTTCCTTTATaGAATAGTCTCCTTGATTTAGCTCCTCCACCATCTGTTCGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: FAMLWSNTYEYLLPL*NSLLDLAPPPSVRY Trigger: GTAGCGAACAGATGGTGGAGGAGCTAAATCAAGGAGACTATTTCATAAAGGAAGTAGATACTCATAAGTATTACTCCAGAGCATGGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS-3UTR CAA 90 bp | TATCCTAATTCTGTCTCATATGCTGCCACAAGATTGTCATTTTGTCATGGATCTCTGTTCGCTACAGCCTaGGTATTGATCATCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YPNSVSYAATRLSFCHGSLFATA*VLIIKG Trigger: TCCTTTGATGATCAATACCAAGGCTGTAGCGAACAG...AGATCCATGACAAAATGACAATCTTGTGGCAGCATATGAGACAGAATTAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 72 bp | ACCTTAAGAGGAGCCTCAGTGCTCCCCGCGGGTGTCTaGTGGACCCAGAGCAGTAGCAGCAGGGTGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLRGASVLPAGV*WTQSSSSRVSC Trigger: GCAGCTCACCCTGCTGCTACTGCTCTGGGTCCAGCAGACACCCGCGGGGAGCACTGAGGCTCCTCTTAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | TTAAGAGGAGCCTCAGTGCTCCCCGCGGGTGTCTGCTaGACCCAGAGCAGTAGCAGCAGGGTGAGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRGASVLPAGVC*TQSSSSRVSCP Trigger: AGGGCAGCTCACCCTGCTGCTACTGCTCTGGGTCCAGCAGACACCCGCGGGGAGCACTGAGGCTCCTCTTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CAA 90 bp | CAATGGCCACAGCATGCACCGGGGTCATGCTCTCCGGGAGGGCCTTaGCCTGGTTCAGCCAGGTTAGGTGGGCTTTTTGCCATGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QWPQHAPGSCSPGGP*PGSARLGGLFAMLW Trigger: CCAGAGCATGGCAAAAAGCCCACCTAACCTGGCTGAACCAGGCAAAGGCCCTCCCGGAGAGCATGACCCCGGTGCATGCTGTGGCCATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CAA 90 bp | GATCCCGCAGCCCTGGCCATGGCCTTGGCCAAGTCAGAGCTCACATaGAGATTCAGGGTGAAAACCACAATGGCCACAGCATGCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: DPAALAMALAKSELT*RFRVKTTMATACTG Trigger: CCCGGTGCATGCTGTGGCCATTGTGGTTTTCACCCTGAATCTCAATGTGAGCTCTGACTTGGCCAAGGCCATGGCCAGGGCTGCGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | GCAGGGGCGCACTTCTTGCTGCAAGCTTTTAGCAGCTaGCAGTTATACGTGCTCATGTTCCCAGCAGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGAHFLLQAFSS*QLYVLMFPADR Trigger: GCGGTCTGCTGGGAACATGAGCACGTATAACTGCCAGCTGCTAAAAGCTTGCAGCAAGAAGTGCGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | GCAGGGAGGCAGAGAGGAACTGGCCGAATCGAATGGTaGAACCTACGTTGGCTCCAATGCTCACATCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRQRGTGRIEW*NLRWLQCSHPS Trigger: TGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | CGTGTCTCTTCCTTTAGCAGGGAGGCAGAGAGGAACTaGCCGAATCGAATGGTGGAACCTACGTTGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSSFSREAERN*PNRMVEPTLAP Trigger: TGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGCTAAAGGAAGAGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CAA 72 bp | GCCCTGGCCATGGCCTTGGCCAAGTCAGAGCTCACATaGAGATTCAGGGTGAAAACCACAATGGCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ALAMALAKSELT*RFRVKTTMATA Trigger: TGCTGTGGCCATTGTGGTTTTCACCCTGAATCTCAATGTGAGCTCTGACTTGGCCAAGGCCATGGCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CAA 72 bp | AGGCAGCCGATAACCACTGGAGCAGGGGCGCACTTCTaGCTGCAAGCTTTTAGCAGCTGGCAGTTATACGTG | + |
|
Preference number: 6 (lower is better) Translates to: RQPITTGAGAHF*LQAFSSWQLYV Trigger: CACGTATAACTGCCAGCTGCTAAAAGCTTGCAGCAAGAAGTGCGCCCCTGCTCCAGTGGTTATCGGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | TTAGCAGGGAGGCAGAGAGGAACTGGCCGAATCGAATaGTGGAACCTACGTTGGCTCCAATGCTCACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LAGRQRGTGRIE*WNLRWLQCSHP Trigger: AGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTCTGCCTCCCTGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CAA 72 bp | GAGAGGAACTGGCCGAATCGAATGGTGGAACCTACGTaGGCTCCAATGCTCACATCCTTCATCCCGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ERNWPNRMVEPT*APMLTSFIPWY Trigger: GTACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 72 bp | GGCCGAATCGAATGGTGGAACCTACGTTGGCTCCAATaGTCACATCCTTCATCCCGTGGTACACCTTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRIEWWNLRWLQ*SHPSSRGTPCN Trigger: GTTACAAGGTGTACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | AGAGGAACTGGCCGAATCGAATGGTGGAACCTACGTTaGCTCCAATGCTCACATCCTTCATCCCGTGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: RGTGRIEWWNLR*LQCSHPSSRGT Trigger: TGTACCACGGGATGAAGGATGTGAGCATTGGAGCCAACGTAGGTTCCACCATTCGATTCGGCCAGTTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | GAGGCACCCAGACAAGTGAAAATGGTAAACAGGGTTTaGTTTCCAGACACCCGTGTCTCTTCCTTTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EAPRQVKMVNRV*FPDTRVSSFSR Trigger: CCTGCTAAAGGAAGAGACACGGGTGTCTGGAAACCAAACCCTGTTTACCATTTTCACTTGTCTGGGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 72 bp | CAGCAGACCGCAAGTTTATCAAATCTCCTTTGGGGCTaGCGCTCTTACTTACGACTTCAAATAACTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: QQTASLSNLLWG*RSYLRLQITHR Trigger: CCTATGAGTTATTTGAAGTCGTAAGTAAGAGCGGCAGCCCCAAAGGAGATTTGATAAACTTGCGGTCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS GCA 72 bp | TCTTGCTGCAAGCTTTTAGCAGCTGGCAGTTATACGTaGTCATGTTCCCAGCAGACCGCAAGTTTATCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SCCKLLAAGSYT*SCSQQTASLSN Trigger: ATTTGATAAACTTGCGGTCTGCTGGGAACATGAGCACGTATAACTGCCAGCTGCTAAAAGCTTGCAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS CCA 72 bp | TGTTCCCAGCAGACCGCAAGTTTATCAAATCTCCTTTaGGGCTGCCGCTCTTACTTACGACTTCAAATAACT | + |
|
Preference number: 6 (lower is better) Translates to: CSQQTASLSNLL*GCRSYLRLQIT Trigger: AGTTATTTGAAGTCGTAAGTAAGAGCGGCAGCCCCAAAGGAGATTTGATAAACTTGCGGTCTGCTGGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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| CDS TCA 72 bp | CTCTGGAGTAATACTTATGAGTATCTACTTCCTTTATaGAATAGTCTCCTTGATTTAGCTCCTCCACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LWSNTYEYLLPL*NSLLDLAPPPS Trigger: AGATGGTGGAGGAGCTAAATCAAGGAGACTATTTCATAAAGGAAGTAGATACTCATAAGTATTACTCCAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032341.3 |
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