RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ART3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034842

Ensembl transcript IDs: ENSMUST00000113083.9, ENSMUST00000117108.8, ENSMUST00000118106.8, ENSMUST00000119587.8, ENSMUST00000120193.8, ENSMUST00000120416.8, ENSMUST00000120781.8, ENSMUST00000121096.8, ENSMUST00000124509.2, ENSMUST00000125462.8, ENSMUST00000126281.8, ENSMUST00000128246.8, ENSMUST00000138003.8, ENSMUST00000138687.2, ENSMUST00000145072.8, ENSMUST00000152041.2, ENSMUST00000154245.8

Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GATGGAAGGAGCGTATTGCCAGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACCAGACCTGGAGCTTTT +
Preference number: 3 (lower is better)
Translates to: DGRSVLPEDAEG*DFGPGTRPGAF
Trigger: AAAAGCTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152041.2
3UTR TCA 72 bp TTACAGCAGAAGCAACGAGTAAAATGGTGGATGCCATaGCTGATGGAAGGAGCGTATTGCCAGAGGATGCAG +
Preference number: 3 (lower is better)
Translates to: LQQKQRVKWWMP*LMEGAYCQRMQ
Trigger: CTGCATCCTCTGGCAATACGCTCCTTCCATCAGTCATGGCATCCACCATTTTACTCGTTGCTTCTGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152041.2
3UTR CAA 72 bp AAAATGGTGGATGCCATGACTGATGGAAGGAGCGTATaGCCAGAGGATGCAGAGGGATGGGATTTCGGACCT +
Preference number: 4 (lower is better)
Translates to: KMVDAMTDGRSV*PEDAEGWDFGP
Trigger: AGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCATCAGTCATGGCATCCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152041.2
CDS-3UTR TCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAAGGGGGCCCAGGGTTTaGTTCCAGGCACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQRGPRV*FQAQSL
Trigger: AAGACTCTGTGCCTGGAATCAAACCCTGGGCCCCCT...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGCGTATTGCCAGAGGATaGAGAGGGATGGGATTTCGG +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIARIARG*RGMGFR
Trigger: CCGAAATCCCATCCCTCTGCATCCTCTGGCAATACG...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGACCTGGAACCAGACCTaGAGCAGGCTTTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKTWNQT*SRLFIR
Trigger: CCGGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAACCTGGAACCAGACCTaGAGCAGGCTTTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQTWNQT*SRLFIR
Trigger: CCGGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGT...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTACCTGGAACCAGACCTaGAGCAGGCTTTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFTWNQT*SRLFIR
Trigger: CCGGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGT...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFEDAEG*DFGPGT
Trigger: GGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTC...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQEDAEG*DFGPGT
Trigger: GGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTC...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKEDAEG*DFGPGT
Trigger: GGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTC...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIEDAEG*DFGPGT
Trigger: GGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTC...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR TCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIASSQRC*MCGRRK
Trigger: CTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGA...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATACGTATTGCCAGAGGATaGAGAGGGATGGGATTTCGG +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIRIARG*RGMGFR
Trigger: CCGAAATCCCATCCCTCTGCATCCTCTGGCAATACG...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAACGTATTGCCAGAGGATaGAGAGGGATGGGATTTCGG +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQRIARG*RGMGFR
Trigger: CCGAAATCCCATCCCTCTGCATCCTCTGGCAATACG...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGCGTATTGCCAGAGGATaGAGAGGGATGGGATTTCGG +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKRIARG*RGMGFR
Trigger: CCGAAATCCCATCCCTCTGCATCCTCTGGCAATACG...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGATGGAAGGAGCGTATTaGCAGAGGATGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIAMEGAY*QRMQRD
Trigger: ATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCAT...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR TCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAATCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQSSQRC*MCGRRK
Trigger: CTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGA...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATATCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKISSQRC*MCGRRK
Trigger: CTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGA...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTTCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFSSQRC*MCGRRK
Trigger: CTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGA...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGTCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKSSQRC*MCGRRK
Trigger: CTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGA...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGCGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIARTRSS*RYCLCS
Trigger: AGAGCATAAACAGTACCTGCAGCTACTACGAGTGCG...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATGGAAGGAGCGTATTaGCAGAGGATGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKMEGAY*QRMQRD
Trigger: ATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCAT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAATGGAAGGAGCGTATTaGCAGAGGATGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQMEGAY*QRMQRD
Trigger: ATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCAT...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAATGGAAGGAGCGTATTaGCAGAGGATGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIMEGAY*QRMQRD
Trigger: ATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCAT...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGCAAAGCAGGTCTGGATaGTTAGCACCCGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKQSRSG*LAPVGC
Trigger: ACAACCAACGGGTGCTAACCATCCAGACCTGCTTTG...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTGCTCTCCGAATGTaGATGAAATGTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIAFALRM*MKCLGL
Trigger: CAAGCCCAGACATTTCATTCACATTCGGAGAGCAAA...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGGTACTGTTTATGCTCTaGAGGACAAGGTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIAVLFML*RTRSLL
Trigger: TAGCAACGACCTTGTCCTTCAGAGCATAAACAGTAC...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFRTRSS*RYCLCS
Trigger: AGAGCATAAACAGTACCTGCAGCTACTACGAGTGCG...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGCGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKRTRSS*RYCLCS
Trigger: AGAGCATAAACAGTACCTGCAGCTACTACGAGTGCG...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATACGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIRTRSS*RYCLCS
Trigger: AGAGCATAAACAGTACCTGCAGCTACTACGAGTGCG...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAACGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQRTRSS*RYCLCS
Trigger: AGAGCATAAACAGTACCTGCAGCTACTACGAGTGCG...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGACTTCCGCCTTCACCTaGAAGATGTCCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIATSAFT*KMSIRT
Trigger: AGTTCTAATGGACATCTTCCAGGTGAAGGCGGAAGT...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
CDS-3UTR TCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGTTTGCTCTCCGAATGTaGATGAAATGTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKFALRM*MKCLGL
Trigger: CAAGCCCAGACATTTCATTCACATTCGGAGAGCAAA...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTTTTGCTCTCCGAATGTaGATGAAATGTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFFALRM*MKCLGL
Trigger: CAAGCCCAGACATTTCATTCACATTCGGAGAGCAAA...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATATTTGCTCTCCGAATGTaGATGAAATGTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIFALRM*MKCLGL
Trigger: CAAGCCCAGACATTTCATTCACATTCGGAGAGCAAA...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAATTTGCTCTCCGAATGTaGATGAAATGTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQFALRM*MKCLGL
Trigger: CAAGCCCAGACATTTCATTCACATTCGGAGAGCAAA...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR TCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAGTACTGTTTATGCTCTaGAGGACAAGGTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQVLFML*RTRSLL
Trigger: TAGCAACGACCTTGTCCTTCAGAGCATAAACAGTAC...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR TCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGTACTGTTTATGCTCTaGAGGACAAGGTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIVLFML*RTRSLL
Trigger: TAGCAACGACCTTGTCCTTCAGAGCATAAACAGTAC...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR TCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGGTACTGTTTATGCTCTaGAGGACAAGGTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKVLFML*RTRSLL
Trigger: TAGCAACGACCTTGTCCTTCAGAGCATAAACAGTAC...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR TCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTGTACTGTTTATGCTCTaGAGGACAAGGTCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFVLFML*RTRSLL
Trigger: TAGCAACGACCTTGTCCTTCAGAGCATAAACAGTAC...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTTCCTCCCTCTTCATCTaGGGAATATACTTCGATTCC +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFSSLFI*GIYFDS
Trigger: GGAATCGAAGTATATTCCGCAGATGAAGAGGGAGGA...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGAAATGTCTGGGCTTGTaGTGTACACCACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIAKCLGL*CTPQFC
Trigger: ACAAAACTGTGGTGTACAGCACAAGCCCAGACATTT...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAAGCCTGGCTTGGTTTTaGTCTCCGAATGTGAATGAA +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKISLAWF*SPNVNE
Trigger: TTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCT...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGAGCCTGGCTTGGTTTTaGTCTCCGAATGTGAATGAA +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKSLAWF*SPNVNE
Trigger: TTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTAGCCTGGCTTGGTTTTaGTCTCCGAATGTGAATGAA +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFSLAWF*SPNVNE
Trigger: TTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCT...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTTGCAGGTACTGTTTATaGTCTGAAGGACAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFCRYCL*SEGQGR
Trigger: ACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCA...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAATGCAGGTACTGTTTATaGTCTGAAGGACAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQCRYCL*SEGQGR
Trigger: ACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCA...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGTGCAGGTACTGTTTATaGTCTGAAGGACAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKCRYCL*SEGQGR
Trigger: ACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCA...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATATGCAGGTACTGTTTATaGTCTGAAGGACAAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKICRYCL*SEGQGR
Trigger: ACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCA...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTACTTCCGCCTTCACCTaGAAGATGTCCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFTSAFT*KMSIRT
Trigger: AGTTCTAATGGACATCTTCCAGGTGAAGGCGGAAGT...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
CDS-3UTR CCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAACTTCCGCCTTCACCTaGAAGATGTCCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQTSAFT*KMSIRT
Trigger: AGTTCTAATGGACATCTTCCAGGTGAAGGCGGAAGT...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
CDS-3UTR CCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGACTTCCGCCTTCACCTaGAAGATGTCCATTAGAACT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKTSAFT*KMSIRT
Trigger: AGTTCTAATGGACATCTTCCAGGTGAAGGCGGAAGT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAAAATGTCTGGGCTTGTaGTGTACACCACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKIKCLGL*CTPQFC
Trigger: ACAAAACTGTGGTGTACAGCACAAGCCCAGACATTT...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAAAAATGTCTGGGCTTGTaGTGTACACCACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQKCLGL*CTPQFC
Trigger: ACAAAACTGTGGTGTACAGCACAAGCCCAGACATTT...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGAAATGTCTGGGCTTGTaGTGTACACCACAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKKCLGL*CTPQFC
Trigger: ACAAAACTGTGGTGTACAGCACAAGCCCAGACATTT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
CDS-3UTR GCA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGACTTCGATTCCATTCTaGTTTTGCACTTCAGGTATT +
Preference number: 4 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIATSIPF*FCTSGI
Trigger: AATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGT...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTACTTCGATTCCATTCTaGTTTTGCACTTCAGGTATT +
Preference number: 4 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFTSIPF*FCTSGI
Trigger: AATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGT...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGACTTCGATTCCATTCTaGTTTTGCACTTCAGGTATT +
Preference number: 4 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKTSIPF*FCTSGI
Trigger: AATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGT...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
CDS-3UTR GCA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAACTTCGATTCCATTCTaGTTTTGCACTTCAGGTATT +
Preference number: 4 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKITSIPF*FCTSGI
Trigger: AATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGT...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
CDS CCA 90 bp TTTCCCACGGCGACTCCAAAGCAGGTCTGGATGGTTAGCACCCGTTaGTTGTCGGCTGTCTCCGGTTTGGCTGAATACGCCAACGTGAAG +
Preference number: 5 (lower is better)
Translates to: FPTATPKQVWMVSTR*LSAVSGLAEYANVK
Trigger: CTTCACGTTGGCGTATTCAGCCAAACCGGAGACAGCCGACAACCAACGGGTGCTAACCATCCAGACCTGCTTTGGAGTCGCCGTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
CDS CCA 90 bp TCGTCAAACGCGTTCTCTGCCATGTCTAACACTTCCGCCTTCACCTaGAAGATGTCCATTAGAACTGCGGCTGCCAGCAGCGTGGTGACC +
Preference number: 5 (lower is better)
Translates to: SSNAFSAMSNTSAFT*KMSIRTAAASSVVT
Trigger: GGTCACCACGCTGCTGGCAGCCGCAGTTCTAATGGACATCTTCCAGGTGAAGGCGGAAGTGTTAGACATGGCAGAGAACGCGTTTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000128246.8
ENSMUST00000138687.2
ENSMUST00000145072.8
ENSMUST00000154245.8
CDS CCA 90 bp GCCATGACTGATGGAAGGAGCGTATTGCCAGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACCAGACCTGGAGCAGGCTTTTCATCC +
Preference number: 5 (lower is better)
Translates to: AMTDGRSVLPEDAEG*DFGPGTRPGAGFSS
Trigger: GGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCATCAGTCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS TCA 90 bp AGATGTACCGTCTTCGGGACAGGCCGGCCATCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAGTCTGCTCTTGAGCCTCATTCACGT +
Preference number: 5 (lower is better)
Translates to: RCTVFGTGRPSSQRC*MCGRRKSALEPHSR
Trigger: ACGTGAATGAGGCTCAAGAGCAGACTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGATGGCCGGCCTGTCCCGAAGACGGTACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
ENSMUST00000154245.8
CDS CCA 90 bp AAGGAGCGTATTGCCAGAGGATGCAGAGGGATGGGATTTCGGACCTaGAACCAGACCTGGAGTAGGATTGTTGGCCTTTCCTCGACTTCT +
Preference number: 5 (lower is better)
Translates to: KERIARGCRGMGFRT*NQTWSRIVGLSSTS
Trigger: AGAAGTCGAGGAAAGGCCAACAATCCTACTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000126281.8
CDS TCA 90 bp CAGGGTCAAGGTTGTTCCTACCTAGCTTGCAGGGGGCCCAGGGTTTaGTTCCAGGCACAGAGTCTTCAAGCTTCTGATTGTCCATATCTG +
Preference number: 5 (lower is better)
Translates to: QGQGCSYLACRGPRV*FQAQSLQASDCPYL
Trigger: CAGATATGGACAATCAGAAGCTTGAAGACTCTGTGCCTGGAATCAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121096.8
CDS CCA 90 bp TCCGGTTTGGCTGAATACGCCAACGTGAAGTTACCCAGCCTGGCTTaGTTTTGCTCTCCGAATGTGAATGAAATGTCTGGGCTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SGLAEYANVKLPSLA*FCSPNVNEMSGLVL
Trigger: CAGCACAAGCCCAGACATTTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTATTCAGCCAAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS-3UTR CAA 90 bp AGCGTATTGCCAGAGGATGCAGAGGGATGGGATTTCGGACCTGGAACCAGACCTTTCTTACTAGGATTGTaGGCCTTTCCTCGACTTCTG +
Preference number: 5 (lower is better)
Translates to: SVLPEDAEGWDFGPGTRPFLLGL*AFPRLL
Trigger: CAGAAGTCGAGGAAAGGCCAACAATCCTAGTAAGAA...AGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152041.2
CDS GCA 90 bp TTGGCTGAATACGCCAACGTGAAGTTACCCAGCCTGGCTTGGTTTTaGTCTCCGAATGTGAATGAAATGTCTGGGCTTGTGCTGTACACC +
Preference number: 5 (lower is better)
Translates to: LAEYANVKLPSLAWF*SPNVNEMSGLVLYT
Trigger: GGTGTACAGCACAAGCCCAGACATTTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTATTCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS-3UTR CAA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAGGGGGCCCAGGGTTaGATTCCAGGCACCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFQGAQG*IPGTRV
Trigger: GACTCTGGTGCCTGGAATCAAACCCTGGGCCCCCTG...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000117108.8
CDS GCA 90 bp CCCACTCCTCCCTCTTCATCTGCGGAATATACTTCGATTCCATTCTaGTTTTGCACTTCAGGTATTCGTCGTCAAACGCGTTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PTPPSSSAEYTSIPF*FCTSGIRRQTRSLP
Trigger: TGGCAGAGAACGCGTTTGACGACGAATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGTATATTCCGCAGATGAAGAGGGAGGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000128246.8
ENSMUST00000138687.2
ENSMUST00000145072.8
ENSMUST00000154245.8
CDS-3UTR CAA 90 bp CTGATGGAAGGAGCGTATTGCCAGAGGATGCAGAGGGATGGGATTTCGGACCTGTATTTCTTACTAGGATaGTTGGCCTTTCCTCGACTT +
Preference number: 5 (lower is better)
Translates to: LMEGAYCQRMQRDGISDLYFLLG*LAFPRL
Trigger: AAGTCGAGGAAAGGCCAACAATCCTAGTAAGAAATA...CAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152041.2
CDS-3UTR CAA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAACTGTCAGGGTCAAGGTaGTTCCTACCTGCGTTCGCG +
Preference number: 5 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQLSGSR*FLPAFA
Trigger: CGCGAACGCAGGTAGGAACAACCTTGACCCTGACAG...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119587.8
CDS-3UTR CAA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGCTGTCAGGGTCAAGGTaGTTCCTACCTAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIALSGSR*FLPSLQ
Trigger: CTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAG...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117108.8
ENSMUST00000121096.8
CDS-3UTR CAA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGCTGTCAGGGTCAAGGTaGTTCCTACCTAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKLSGSR*FLPSLQ
Trigger: CTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAG...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117108.8
ENSMUST00000121096.8
CDS-3UTR CAA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTCCTTTCCTCGACACTaGAAAAACCTCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIASFPRH*KNLTQR
Trigger: CCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGA...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS CCA 90 bp AAGGTTGTTCCTACCAGAGTCTTCAAGCTTCTGATTGTCCATATCTaGGTTGTAGAGATACCTAGGGTCAATATATTCTGCGTTCGCGAT +
Preference number: 5 (lower is better)
Translates to: KVVPTRVFKLLIVHI*VVEIPRVNIFCVRD
Trigger: ATCGCGAACGCAGAATATATTGACCCTAGGTATCTCTACAACCCAGATATGGACAATCAGAAGCTTGAAGACTCTGGTAGGAACAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113083.9
ENSMUST00000126281.8
ENSMUST00000138003.8
ENSMUST00000152041.2
CDS-3UTR CAA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGTCCTTTCCTCGACACTaGAAAAACCTCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKSFPRH*KNLTQR
Trigger: CCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGA...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CAA 90 bp ACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTTCCTTTCCTCGACACTaGAAAAACCTCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: TSCGIPIAVFQIKIKIAFSFPRH*KNLTQR
Trigger: CCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGA...AAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CAA 90 bp TCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTTCAATCCTTTCCTCGACACTaGAAAAACCTCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SCGIPIAVFQIKIKIAFQSFPRH*KNLTQR
Trigger: CCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGA...TTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CAA 90 bp CTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATATCCTTTCCTCGACACTaGAAAAACCTCACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLTSCGIPIAVFQIKIKISFPRH*KNLTQR
Trigger: CCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGA...TATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS-3UTR CAA 90 bp TTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGATAGCGTTCTTACTAGGATTGTaGGCCTTTCCTCGACTTCTG +
Preference number: 5 (lower is better)
Translates to: LTSCGIPIAVFQIKIKIAFLLGL*AFPRLL
Trigger: CAGAAGTCGAGGAAAGGCCAACAATCCTAGTAAGAA...CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120416.8
ENSMUST00000152041.2
CDS-3UTR CAA 90 bp TTTCTCTTGACTTCCTGTGGGATCCCCATAGCAGTCTTTCAGATAAAGATTAAGTATTTCTTACTAGGATaGTTGGCCTTTCCTCGACTT +
Preference number: 5 (lower is better)
Translates to: FLLTSCGIPIAVFQIKIKYFLLG*LAFPRL
Trigger: AAGTCGAGGAAAGGCCAACAATCCTAGTAAGAAATA...CTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAGTCAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120416.8
ENSMUST00000152041.2
CDS CAA 90 bp CCCACGGCGACTCCAAAGCAGGTCTGGATGGTTAGCACCCGTTGGTaGTCGGCTGTCTCCGGTTTGGCTGAATACGCCAACGTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: PTATPKQVWMVSTRW*SAVSGLAEYANVKL
Trigger: TAACTTCACGTTGGCGTATTCAGCCAAACCGGAGACAGCCGACAACCAACGGGTGCTAACCATCCAGACCTGCTTTGGAGTCGCCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
CDS TCA 72 bp GTCTTCGGGACAGGCCGGCCATCTTCACAGCGCTGCTaGATGTGTGGTAGAAGGAAGTCTGCTCTTGAGCCT +
Preference number: 6 (lower is better)
Translates to: VFGTGRPSSQRC*MCGRRKSALEP
Trigger: AGGCTCAAGAGCAGACTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGATGGCCGGCCTGTCCCGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
ENSMUST00000154245.8
CDS CCA 72 bp ATTGCCAGAGGATGCAGAGGGATGGGATTTCGGACCTaGAACCAGACCTGGAGCAGGCTTTTCATCCGGCAG +
Preference number: 6 (lower is better)
Translates to: IARGCRGMGFRT*NQTWSRLFIRQ
Trigger: CTGCCGGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS CAA 72 bp GGCATTCTGTCAGGGTCAAGGTTGTTCCTACCTAGCTaGCAGGGGGCCCAGGGTTTGATTCCAGGCACCAGA +
Preference number: 6 (lower is better)
Translates to: GILSGSRLFLPS*QGAQGLIPGTR
Trigger: TCTGGTGCCTGGAATCAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAGAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000117108.8
CDS CAA 72 bp GGCATTCTGTCAGGGTCAAGGTTGTTCCTACCTAGCTaGCAGGGGGCCCAGGGTTTGATTCCAGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: GILSGSRLFLPS*QGAQGLIPGTE
Trigger: CTCTGTGCCTGGAATCAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAGAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121096.8
CDS CAA 90 bp CAGGTCTGGATGGTTAGCACCCGTTGGTTGTCGGCTGTCTCCGGTTaGGCTGAATACGCCAACGTGAAGTTACCCAGCCTGGCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: QVWMVSTRWLSAVSG*AEYANVKLPSLAWF
Trigger: AAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTATTCAGCCAAACCGGAGACAGCCGACAACCAACGGGTGCTAACCATCCAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS TCA 72 bp TGTCGGCTGTCTCCGGTTTGGCTGAATACGCCAACGTaGAGTTACCCAGCCTGGCTTGGTTTTGCTCTCCGA +
Preference number: 6 (lower is better)
Translates to: CRLSPVWLNTPT*SYPAWLGFALR
Trigger: TCGGAGAGCAAAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTATTCAGCCAAACCGGAGACAGCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS CCA 72 bp TGCAGAGGGATGGGATTTCGGACCTGGAACCAGACCTaGAGCAGGCTTTTCATCCGGCAGGAGAGGATTTTC +
Preference number: 6 (lower is better)
Translates to: CRGMGFRTWNQT*SRLFIRQERIF
Trigger: GAAAATCCTCTCCTGCCGGATGAAAAGCCTGCTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000120193.8
ENSMUST00000121096.8
ENSMUST00000138003.8
CDS CCA 72 bp GATGGAAGGAGCGTATTGCCAGAGGATGCAGAGGGATaGGATTTCGGACCTGGAACCAGACCTGGAGTAGGA +
Preference number: 6 (lower is better)
Translates to: DGRSVLPEDAEG*DFGPGTRPGVG
Trigger: TCCTACTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAATACGCTCCTTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000126281.8
CDS CAA 72 bp ACTCCAAAGCAGGTCTGGATGGTTAGCACCCGTTGGTaGTCGGCTGTCTCCGGTTTGGCTGAATACGCCAAC +
Preference number: 6 (lower is better)
Translates to: TPKQVWMVSTRW*SAVSGLAEYAN
Trigger: GTTGGCGTATTCAGCCAAACCGGAGACAGCCGACAACCAACGGGTGCTAACCATCCAGACCTGCTTTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
CDS CCA 72 bp ATTGCCAGAGGATGCAGAGGGATGGGATTTCGGACCTaGAACCAGACCTGGAGTAGGATTGTTGGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: IARGCRGMGFRT*NQTWSRIVGLS
Trigger: GGAAAGGCCAACAATCCTACTCCAGGTCTGGTTCCAGGTCCGAAATCCCATCCCTCTGCATCCTCTGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000126281.8
CDS CAA 90 bp CATCTTCACAGCGCTGCTGAATGTGTGGTAGAAGGAAGTCTGCTCTaGAGCCTCATTCACGTAGGCCGTCAGAGCTATGCCATAGGTGTC +
Preference number: 6 (lower is better)
Translates to: HLHSAAECVVEGSLL*SLIHVGRQSYAIGV
Trigger: GACACCTATGGCATAGCTCTGACGGCCTACGTGAATGAGGCTCAAGAGCAGACTTCCTTCTACCACACATTCAGCAGCGCTGTGAAGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
ENSMUST00000154245.8
CDS CAA 90 bp TCAGGGTCAAGGTTGTTCCTACCTAGCTTGCAGGGGGCCCAGGGTTaGATTCCAGGCACCAGAGTCTTCAAGCTTCTGATTGTCCATATC +
Preference number: 6 (lower is better)
Translates to: SGSRLFLPSLQGAQG*IPGTRVFKLLIVHI
Trigger: GATATGGACAATCAGAAGCTTGAAGACTCTGGTGCCTGGAATCAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000117108.8
CDS CAA 90 bp TTAATTTCTGGCATTCTGTCAGGGTCAAGGTTGTTCCTACCTAGCTaGCAGGGGGCCCAGGGTTTGATTCCAGGCACAGAGTCTTCAAGC +
Preference number: 6 (lower is better)
Translates to: LISGILSGSRLFLPS*QGAQGLIPGTESSS
Trigger: GCTTGAAGACTCTGTGCCTGGAATCAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAGAATGCCAGAAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121096.8
CDS GCA 72 bp TTTTCAGACCCCCGAGGAATGCGCACTCGTAGTAGCTaGAGGTACTGTTTATGCTCTGAAGGACAAGGTCGT +
Preference number: 6 (lower is better)
Translates to: FSDPRGMRTRSS*RYCLCSEGQGR
Trigger: ACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCAGCTACTACGAGTGCGCATTCCTCGGGGGTCTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000126281.8
ENSMUST00000138003.8
CDS CAA 72 bp AGCACTTTAATTTCTGGCATTCTGTCAGGGTCAAGGTaGTTCCTACCTAGCTTGCAGGGGGCCCAGGGTTTG +
Preference number: 6 (lower is better)
Translates to: STLISGILSGSR*FLPSLQGAQGL
Trigger: CAAACCCTGGGCCCCCTGCAAGCTAGGTAGGAACAACCTTGACCCTGACAGAATGCCAGAAATTAAAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117108.8
ENSMUST00000121096.8
CDS GCA 72 bp AGGAGCGCATCGTTTGCCCACTCCTCCCTCTTCATCTaGGGAATATACTTCGATTCCATTCTGCTTTTGCAC +
Preference number: 6 (lower is better)
Translates to: RSASFAHSSLFI*GIYFDSILLLH
Trigger: GTGCAAAAGCAGAATGGAATCGAAGTATATTCCGCAGATGAAGAGGGAGGAGTGGGCAAACGATGCGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000128246.8
ENSMUST00000145072.8
ENSMUST00000154245.8
CDS GCA 72 bp TACGCCAACGTGAAGTTACCCAGCCTGGCTTGGTTTTaGTCTCCGAATGTGAATGAAATGTCTGGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: YANVKLPSLAWF*SPNVNEMSGLV
Trigger: CACAAGCCCAGACATTTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS CCA 72 bp GCTGAATACGCCAACGTGAAGTTACCCAGCCTGGCTTaGTTTTGCTCTCCGAATGTGAATGAAATGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AEYANVKLPSLA*FCSPNVNEMSG
Trigger: CCCAGACATTTCATTCACATTCGGAGAGCAAAACCAAGCCAGGCTGGGTAACTTCACGTTGGCGTATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
CDS GCA 72 bp TTCTGGCATTCTGTCAGGGTCAAGGTTGTTCCTACCTaGGTTCGCGATACAATTTTCTGTTTTCAGACCCCC +
Preference number: 6 (lower is better)
Translates to: FWHSVRVKVVPT*VRDTIFCFQTP
Trigger: GGGGGTCTGAAAACAGAAAATTGTATCGCGAACGCAGGTAGGAACAACCTTGACCCTGACAGAATGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119587.8
CDS CAA 90 bp TCCTCCCTCTTCATCTGCGGAATATACTTCGATTCCATTCTGCTTTaGCACTTCAGGTATTCGTCGTCAAACGCGTTCTCTGCCATGTCT +
Preference number: 6 (lower is better)
Translates to: SSLFICGIYFDSILL*HFRYSSSNAFSAMS
Trigger: AGACATGGCAGAGAACGCGTTTGACGACGAATACCTGAAGTGCAAAAGCAGAATGGAATCGAAGTATATTCCGCAGATGAAGAGGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000128246.8
ENSMUST00000138687.2
ENSMUST00000145072.8
ENSMUST00000154245.8
CDS TCA 72 bp GCTGCAGGGCTCTCACCAAGTAAAAATGAAAAGCCTTaGACGGGAAGTTATAGATGTACCGTCTTCGGGACA +
Preference number: 6 (lower is better)
Translates to: AAGLSPSKNEKP*TGSYRCTVFGT
Trigger: TGTCCCGAAGACGGTACATCTATAACTTCCCGTTCAAGGCTTTTCATTTTTACTTGGTGAGAGCCCTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000120781.8
ENSMUST00000121096.8
ENSMUST00000124509.2
ENSMUST00000125462.8
ENSMUST00000126281.8
ENSMUST00000128246.8
ENSMUST00000154245.8
CDS CAA 90 bp TCAGAGCATTCTTCAAAGAAAAGGAGGTATTTCTTACTAGGATTGTaGGCCTTTCCTCGACTTCTGTCAGGCTTTTCATCCGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SEHSSKKRRYFLLGL*AFPRLLSGFSSGRR
Trigger: TCTCCTGCCGGATGAAAAGCCTGACAGAAGTCGAGGAAAGGCCAACAATCCTAGTAAGAAATACCTCCTTTTCTTTGAAGAATGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120416.8
ENSMUST00000152041.2
CDS TCA 72 bp AGGACAAGGTCGTTGCTAGTTCCTTTCCTCGACACTTaGAAAACCTCACTCAGAGGTATTAAAACAACGCTG +
Preference number: 6 (lower is better)
Translates to: RTRSLLVPFLDT*KTSLRGIKTTL
Trigger: CAGCGTTGTTTTAATACCTCTGAGTGAGGTTTTTCAAGTGTCGAGGAAAGGAACTAGCAACGACCTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000113083.9
ENSMUST00000117108.8
ENSMUST00000118106.8
ENSMUST00000119587.8
ENSMUST00000120193.8
ENSMUST00000120416.8
ENSMUST00000121096.8
ENSMUST00000125462.8
ENSMUST00000126281.8
CDS TCA 72 bp GGGTCAAGGTTGTTCCTACCAGAGTCTTCAAGCTTCTaGTTGTCCATATCTGGGTTGTTTGTAGAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: GSRLFLPESSSF*LSISGLFVEVC
Trigger: ACACACTTCTACAAACAACCCAGATATGGACAATCAGAAGCTTGAAGACTCTGGTAGGAACAACCTTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118106.8
ENSMUST00000120193.8
ENSMUST00000120416.8
CDS CAA 90 bp ATTTCAGAGCATTCTTCAAAGAAAAGGAGGTATTTCTTACTAGGATaGTTGGCCTTTCCTCGACTTCTGTCAGGCTTTTCATCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: ISEHSSKKRRYFLLG*LAFPRLLSGFSSGR
Trigger: CCTGCCGGATGAAAAGCCTGACAGAAGTCGAGGAAAGGCCAACAATCCTAGTAAGAAATACCTCCTTTTCTTTGAAGAATGCTCTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120416.8
ENSMUST00000152041.2
CDS CAA 72 bp AGCACTTTAATTTCTGGCATTCTGTCAGGGTCAAGGTaGTTCCTACCTGCGTTCGCGATACAATTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: STLISGILSGSR*FLPAFAIQFSV
Trigger: AACAGAAAATTGTATCGCGAACGCAGGTAGGAACAACCTTGACCCTGACAGAATGCCAGAAATTAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119587.8
CDS CAA 72 bp TCTTCAAAGAAAAGGAGGTATTTCTTACTAGGATTGTaGGCCTTTCCTCGACTTCTGTCAGGCTTTTCATCC +
Preference number: 6 (lower is better)
Translates to: SSKKRRYFLLGL*AFPRLLSGFSS
Trigger: GGATGAAAAGCCTGACAGAAGTCGAGGAAAGGCCAACAATCCTAGTAAGAAATACCTCCTTTTCTTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120416.8
ENSMUST00000152041.2