Pregenerated sensors for ART1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030996Ensembl transcript IDs: ENSMUST00000033300.4, ENSMUST00000209809.2, ENSMUST00000210211.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTaGGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACAC | + |
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Preference number: 1 (lower is better) Translates to: GRTRSHLPRPAPTWL*GTTALCAGTHRPSH Trigger: GTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CCA 90 bp | TCCACAGGGCGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTaGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: STGRTRSHLPRPAPT*LCGTTALCAGTHRP Trigger: TGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCGCCCTGTGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR TCA 90 bp | ACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTaGATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TSGHFRQSGRLRGER*MACAGHASAQARAH Trigger: GTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | GTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATaGCAGCGCGCAGGCGCGTGCTCACCTACGGCTGCTGCTCCGAGC | + |
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Preference number: 1 (lower is better) Translates to: VWPTSWRTLNGVCWA*QRAGACSPTAAAPS Trigger: GCTCGGAGCAGCAGCCGTAGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | GGTGAATCCTGTCCTGCTTGTCCACAGGGCGGACACGCAGCCACCTaGCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCTGT | + |
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Preference number: 1 (lower is better) Translates to: GESCPACPQGGHAAT*LGQHQRGCAARRRC Trigger: ACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCGCCCTGTGGACAAGCAGGACAGGATTCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CCA 90 bp | CGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATaGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTGCTCACCTAC | + |
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Preference number: 1 (lower is better) Translates to: RGTSASLADFVENVE*RVLGMPARRRVLTY Trigger: GTAGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CCA 90 bp | GCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATaGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: AFPFDAQRCGLTFGS*THGGHQLDVRPRGT Trigger: AGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | CTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTGTaGTGGGCATGCCAGCGCGCAGGCGCGTGCTCACCTACGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LPPVWPTSWRTLNGV*WACQRAGACSPTAA Trigger: AGCAGCCGTAGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CCA 90 bp | TGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTaGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: WMCDLGALPPVWPTS*RTLNGVCWACQRAG Trigger: GCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CCA 90 bp | GCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTaGCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: AGTSWMCDLGALPPV*PTSWRTLNGVCWAC Trigger: GCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR TCA 90 bp | GTGTGGATGTCTCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTaGCCTTCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: VWMSLPSHLTLSAVA*PSAHGRTAGTSWMC Trigger: GCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGAGACATCCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | TGCTGCTGCGCCGCCGTGCAGCTGCCTATGTGTGCAACCTACTGCTaGCCTGTGTGTTCATCTCCCTGCTGGCACCTCTGGCCTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: CCCAAVQLPMCATYC*PVCSSPCWHLWPST Trigger: GGTGGAAGGCCAGAGGTGCCAGCAGGGAGATGAACACACAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCACGGCGGCGCAGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | CTCTGCTGCTGCGCCGCCGTGCAGCTGCCTATGTGTGCAACCTACTaGTGCCCTGTGTGTTCATCTCCCTGCTGGCACCTCTGGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LCCCAAVQLPMCATY*CPVCSSPCWHLWPS Trigger: GGAAGGCCAGAGGTGCCAGCAGGGAGATGAACACACAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCACGGCGGCGCAGCAGCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR TCA 90 bp | CATCACACGCAGCTCGTGCCGTGTGGATGTCTCTGCCTTCCCATTTaGCGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGG | + |
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Preference number: 1 (lower is better) Translates to: HHTQLVPCGCLCLPI*RSALWPDLRLMDAR Trigger: CCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGAGACATCCACACGGCACGAGCTGCGTGTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR GCA 90 bp | CTGCCTATGTGTGCAACCTACTGCTGCCCTGTGTGTTCATCTCCCTaGTGGCACCTCTGGCCTTCCACCTGCCCGCTGACTCCGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LPMCATYCCPVCSSP*WHLWPSTCPLTPGR Trigger: TCTCCCCGGAGTCAGCGGGCAGGTGGAAGGCCAGAGGTGCCAGCAGGGAGATGAACACACAGGGCAGCAGTAGGTTGCACACATAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR TCA 90 bp | GTGACTCCAGCTTGGCCCACGGTCATGTGTGTGTGTCACGCACAATaGGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTGCCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VTPAWPTVMCVCHAQ*VEVSWLQVESLPVL Trigger: GAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACATGACCGTGGGCCAAGCTGGAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR GCA 90 bp | GACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTaGTACACTGAAGGCGCACAGTTGACCAGCCTTCTTCAGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: DGPRVPCRWTDSPGS*YTEGAQLTSLLQSG Trigger: CCCTGACTGAAGAAGGCTGGTCAACTGTGCGCCTTCAGTGTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR CCA 90 bp | ATGTGTCTGGCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATaGACTGATTCACCAGGATCCTGCTACACTGAAGGCGCACAGTTG | + |
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Preference number: 1 (lower is better) Translates to: MCLAIAIDGPRVPCR*TDSPGSCYTEGAQL Trigger: CAACTGTGCGCCTTCAGTGTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGCCAGACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR GCA 90 bp | TGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTGGCCTGGAACTTaGTATGTAGCCCAGGTTGGCTTTGAACTCACACAGATCCACATG | + |
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Preference number: 1 (lower is better) Translates to: CRVRVSLCSPCWPGT*YVAQVGFELTQIHM Trigger: CATGTGGATCTGTGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| 3UTR CCA 90 bp | AGATCCACATGCCTCTGCCTCTCCAAACACAGGTGCCACTATGCCTaGCTTGGGTGTAGGTTACTAATTAAAGGGACAAAGCTACACATT | + |
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Preference number: 1 (lower is better) Translates to: RSTCLCLSKHRCHYA*LGCRLLIKGTKLHI Trigger: AATGTGTAGCTTTGTCCCTTTAATTAGTAACCTACACCCAAGCCAGGCATAGTGGCACCTGTGTTTGGAGAGGCAGAGGCATGTGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| 3UTR CCA 90 bp | GTTATTTTCCTTTGTCGAGTTAGAGTCTCGCTATGTAGTCCTTGCTaGCCTGGAACTTGCTATGTAGCCCAGGTTGGCTTTGAACTCACA | + |
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Preference number: 1 (lower is better) Translates to: VIFLCRVRVSLCSPC*PGTCYVAQVGFELT Trigger: TGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACATAGCGAGACTCTAACTCGACAAAGGAAAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| 3UTR-3UTR CCA 90 bp | CACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTGCGGCACGACGGCGCCCCTGCTGGCACCTCTaGCCTTCCACCTGCCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: HAATCLGQHQRGCAARRRPCWHL*PSTCPL Trigger: CAGCGGGCAGGTGGAAGGCCAGAGGTGCCAGCAGGG...GCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGCTGACCTTCGGCTCATaGACGCACGGCGGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: VRHDGAVRWDAPAITRSSLTFGS*THGGHQ Trigger: CTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAG...CGAGCTGCGTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCGTGCTCACCTACGGCTaGTGCTCCGAGCCCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: LMDARRAPAGCATSGHFRVLTYG*CSEPYP Trigger: TGGGTAGGGCTCGGAGCAGCAGCCGTAGGTGAGCAC...GCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CAA 90 bp | GACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTaGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DLGALPPVWPTSWRT*NGVCWACQRAGACS Trigger: TGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCCTTCGTGGAGAACGTTaGATGGCGTGTGCTGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GTTALCAGTHRPSHAARALRGER*MACAGH Trigger: ATGCCCAGCACACGCCATTCAACGTTCTCCACGAAG...GGCACGAGCTGCGTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCCCGTCCCTACATCCCTaGATGAGGTTCAGTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GTTALCAGTHRPSHAARAPSLHP*MRFSLQ Trigger: TTGGAGACTGAACCTCATCCAGGGATGTAGGGACGG...GGCACGAGCTGCGTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR CCA 90 bp | GACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGTGTTCATCTCCCTGCTaGCACCTCTGGCCTTCCACC | + |
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Preference number: 2 (lower is better) Translates to: DAQRCGLTFGSWTHGGHQCSSPC*HLWPST Trigger: GGTGGAAGGCCAGAGGTGCCAGCAGGGAGATGAACA...CTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTCTTCCACCTGCCCGCTaGCTCCGGGGAGAAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: DVRPRGTSASLADFVENVLPPAR*LRGEGV Trigger: GACACCTTCTCCCCGGAGTCAGCGGGCAGGTGGAAG...AACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCCAGTGCCTCTCCCGTaGCTGGTCTTCTTGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ADFVENVEWRVLGMPARRPVPLP*LVFLGP Trigger: AGGCCCCAAGAAGACCAGGCACGGGAGAGGCACTGG...CCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCGTGCCTGGTCTTCTTaGGGCCTTTATGAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LMDARRAPAGCATSGHFRRAWSS*GLYERQ Trigger: TTGCCTCTCATAAAGGCCCCAAGAAGACCAGGCACG...GCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCTCGTGCCGTGTGGATGTCTCTGCCTTCCCATTTGACGCTCAGCGCTGTGGGAGAAGGTGTCTCTaGGCGTCACCGTGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RSSCRVDVSAFPFDAQRCGRRCL*ASPCSW Trigger: CCAGGAGCACGGTGACGCCCAGAGACACCTTCTCCC...ACAGCGCTGAGCGTCAAATGGGAAGGCAGAGACATCCACACGGCACGAGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR TCA 90 bp | GCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCTGAAGGCGCACAGTTaGCCAGCCTTCTTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ADFVENVEWRVLGMPARRLKAHS*PAFFSQ Trigger: CTGACTGAAGAAGGCTGGTCAACTGTGCGCCTTCAG...CCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGAGCCCTACCCAGACGTaGCCTTCACTCTGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SAFPFDAQRCGLTFGSWTSPTQT*PSLCCC Trigger: GCAGCAGCAGAGTGAAGGTCACGTCTGGGTAGGGCT...CGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGCGACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTCGAGAGCATGCCACCTaGAGAGAGCGTTCCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: DVRPRGTSASLADFVENVREHAT*RERSTH Trigger: ATGAGTGGAACGCTCTCTGCAGGTGGCATGCTCTCG...AACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCTCCAGGTTTGTAGAAGTCTTAAACTCTGCTCCCGGTCCCAGATCCTTCTCTGGGCGTCACCGTaGTCCTGGCGCTCACCGTCT | + |
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Preference number: 2 (lower is better) Translates to: VRLQVCRSLKLCSRSQILLWASP*SWRSPS Trigger: AGACGGTGAGCGCCAGGAGCACGGTGACGCCCAGAG...AAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCTACAAACCTGGAGCCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CAA 90 bp | CTCCAGCTTGGCCCACGGTCATGTGTGTGTGTCACGCACAATGAGTaGAAGTCTCCTGGCTCCAAGTTGAGTCTCTGCCTGTCCTCGAGT | + |
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Preference number: 2 (lower is better) Translates to: LQLGPRSCVCVTHNE*KSPGSKLSLCLSSS Trigger: ACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACATGACCGTGGGCCAAGCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGTCCATAATAAATGAGTaGTCCCAGTGCCTCTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: SAFPFDAQRCGLTFGSWTSIINE*SQCLSR Trigger: ACGGGAGAGGCACTGGGAGCACTCATTTATTATGGA...CGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCTCCAGGTTTGTAGAAGTCTTAAACTCTGCTCCCGGTCCCAGATCCTTTCCTGGCCGAGAGCATaGCACCTGCAGAGAGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: VRLQVCRSLKLCSRSQILSWPRA*HLQRAF Trigger: GAACGCTCTCTGCAGGTGGCATGCTCTCGGCCAGGA...AAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCTACAAACCTGGAGCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGTCTTAAACTCTGCTCCCGGTCCCAGATCCTTCTAAGCCTTCAAACTCTGGGACACGCAGCCACCTaGCTCGGCCAGCACCAACGT | + |
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Preference number: 2 (lower is better) Translates to: RSLKLCSRSQILLSLQTLGHAAT*LGQHQR Trigger: ACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCC...CAGAGTTTGAAGGCTTAGAAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTCACGCACAATGAGTTGAAGTCTCCTGGCTCCAAGTaGAGTCTCTGCCTGTCCTCGAGTCCTCTGCTTGTCCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: CVCVTHNELKSPGSK*SLCLSSSPLLVLSP Trigger: GGGACTGAGGACAAGCAGAGGACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAGTCCCGTCCCTACATCCCTGGATGAGGTTCAGTCTCCAAATTCTCTTCCTGAAGGCGCACAGTTaGCCAGCCTTCTTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSVPSLHPWMRFSLQILFLKAHS*PAFFSQ Trigger: CTGACTGAAGAAGGCTGGTCAACTGTGCGCCTTCAG...GAAGAGAATTTGGAGACTGAACCTCATCCAGGGATGTAGGGACGGGACTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCCTGAAGGCGCACAGTTaGCCAGCCTTCTTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IAIDGPRVPCRWTDSPGSLKAHS*PAFFSQ Trigger: CTGACTGAAGAAGGCTGGTCAACTGTGCGCCTTCAG...GGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTACTCCTTTATACCACCTTTAGGTGCTTTGCATCTCCCAGCCAACACACAGGACTCCCTAGGTCTGTaGGGCTCCAGGTTTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: GYSFIPPLGALHLPANTQDSLGL*GSRFVE Trigger: TTCTACAAACCTGGAGCCTCACAGACCTAGGGAGTC...CTGTGTGTTGGCTGGGAGATGCAAAGCACCTAAAGGTGGTATAAAGGAGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTATGTAGCCCAGGTTGGCTTTGAACTCACACAGATCCACATGCCTCTGCCTTCGATCCATAATAAATaGGTGCTCCCAGTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CYVAQVGFELTQIHMPLPSIHNK*VLPVPL Trigger: GAGAGGCACTGGGAGCACTCATTTATTATGGATCGA...AGGCAGAGGCATGTGGATCTGTGTGAGTTCAAAGCCAACCTGGGCTACATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGATCGATCCATAATAAATaGGTGCTCCCAGTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HSSVSLRVSSFQNRRLCRSIHNK*VLPVPL Trigger: GAGAGGCACTGGGAGCACTCATTTATTATGGATCGA...TCTGCACAGCCTTCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACTAATTAAAGGGACAAAGCTACACATTTGCTTGTCACCCTTAGCAGTTGCTCCAGTGCCTCTCCCGTaGCTGGTCTTCTTGGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLIKGTKLHICLSPLAVAPVPLP*LVFLGP Trigger: AGGCCCCAAGAAGACCAGGCACGGGAGAGGCACTGG...AGCAACTGCTAAGGGTGACAAGCAAATGTGTAGCTTTGTCCCTTTAATTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTGTAGGTTACTAATTAAAGGGACAAAGCTACACATTTGCTTGTCACCCTTAGGCTGTGCAGACATTTaGCTCGGAGCTTCGATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GCRLLIKGTKLHICLSPLGCADI*LGASIH Trigger: ATGGATCGAAGCTCCGAGTCAAATGTCTGCACAGCC...TAAGGGTGACAAGCAAATGTGTAGCTTTGTCCCTTTAATTAGTAACCTACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | CGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTTGTaGGGCACGACGGCGCTGTGCGCTGGGACGCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: RSHLPRPAPTWL*GTTALCAGTHR Trigger: CCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | CGGACACGCAGCCACCTGCCTCGGCCAGCACCAACGTaGTTGTGCGGCACGACGGCGCTGTGCGCTGGGACG | + |
|
Preference number: 3 (lower is better) Translates to: RTRSHLPRPAPT*LCGTTALCAGT Trigger: CGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | TCGGCTCATGGACGCACGGCGGGCACCAGCTGGATGTaGGACCTCGGGGCACTTCCGCCAGTCTGGCCGACT | + |
|
Preference number: 3 (lower is better) Translates to: SAHGRTAGTSWM*DLGALPPVWPT Trigger: AGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAGCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | TGTCCTGCTTGTCCACAGGGCGGACACGCAGCCACCTaGCTCGGCCAGCACCAACGTGGTTGTGCGGCACGA | + |
|
Preference number: 3 (lower is better) Translates to: CPACPQGGHAAT*LGQHQRGCAAR Trigger: TCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGTCCGCCCTGTGGACAAGCAGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | TCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTGAATaGCGTGTGCTGGGCATGCCAGCGCGCAGGCGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SASLADFVENVE*RVLGMPARRRV Trigger: CACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR TCA 72 bp | CACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTTaGATGGCGTGTGCTGGGCATGCCAGCGCGCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: HFRQSGRLRGER*MACAGHASAQA Trigger: CGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR TCA 72 bp | TCTCTGCCTTCCCATTTGACGCTCAGCGCTGTGGCCTaGCCTTCGGCTCATGGACGCACGGCGGGCACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLPSHLTLSAVA*PSAHGRTAGTS Trigger: GCTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | GTCTGGCCGACTTCGTGGAGAACGTTGAATGGCGTGTaGTGGGCATGCCAGCGCGCAGGCGCGTGCTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VWPTSWRTLNGV*WACQRAGACSP Trigger: AGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | TGGCCGACTTCGTGGAGAACGTTGAATGGCGTGTGCTaGGCATGCCAGCGCGCAGGCGCGTGCTCACCTACG | + |
|
Preference number: 3 (lower is better) Translates to: WPTSWRTLNGVC*ACQRAGACSPT Trigger: CGTAGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | TTTGACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATaGACGCACGGCGGGCACCAGCTGGATGTGCGACCT | + |
|
Preference number: 3 (lower is better) Translates to: FDAQRCGLTFGS*THGGHQLDVRP Trigger: AGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | CCCAGACGTGACCTTCACTCTGCTGCTGCGCCGCCGTaGAGCTGCCTATGTGTGCAACCTACTGCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRRDLHSAAAPP*SCLCVQPTAAL Trigger: CAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCACGGCGGCGCAGCAGCAGAGTGAAGGTCACGTCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | ACTTCGTGGAGAACGTTGAATGGCGTGTGCTGGGCATaGCAGCGCGCAGGCGCGTGCTCACCTACGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSWRTLNGVCWA*QRAGACSPTAA Trigger: AGCAGCCGTAGGTGAGCACGCGCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | GCAACCTACTGCTGCCCTGTGTGTTCATCTCCCTGCTaGCACCTCTGGCCTTCCACCTGCCCGCTGACTCCG | + |
|
Preference number: 3 (lower is better) Translates to: ATYCCPVCSSPC*HLWPSTCPLTP Trigger: CGGAGTCAGCGGGCAGGTGGAAGGCCAGAGGTGCCAGCAGGGAGATGAACACACAGGGCAGCAGTAGGTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | GACCTCGGGGCACTTCCGCCAGTCTGGCCGACTTCGTaGAGAACGTTGAATGGCGTGTGCTGGGCATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLGALPPVWPTS*RTLNGVCWACQ Trigger: CTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | GCCGCCGTGCAGCTGCCTATGTGTGCAACCTACTGCTaGCCTGTGTGTTCATCTCCCTGCTGGCACCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AAVQLPMCATYC*PVCSSPCWHLW Trigger: CCAGAGGTGCCAGCAGGGAGATGAACACACAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCACGGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | AGCTGGATGTGCGACCTCGGGGCACTTCCGCCAGTCTaGCCGACTTCGTGGAGAACGTTGAATGGCGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SWMCDLGALPPV*PTSWRTLNGVC Trigger: GCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGCCCCGAGGTCGCACATCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR TCA 72 bp | CAGCTCGTGCCGTGTGGATGTCTCTGCCTTCCCATTTaGCGCTCAGCGCTGTGGCCTGACCTTCGGCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QLVPCGCLCLPI*RSALWPDLRLM Trigger: CATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTCAAATGGGAAGGCAGAGACATCCACACGGCACGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR GCA 72 bp | ACTCTGCTGCTGCGCCGCCGTGCAGCTGCCTATGTGTaGAACCTACTGCTGCCCTGTGTGTTCATCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLLLRRRAAAYV*NLLLPCVFISL Trigger: CAGGGAGATGAACACACAGGGCAGCAGTAGGTTGCACACATAGGCAGCTGCACGGCGGCGCAGCAGCAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | GAGTGCTCCCAGTGCCTCTCCCGTGCCTGGTCTTCTTaGGGCCTTTATGAGAGGCAATTAAGTGACTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ECSQCLSRAWSS*GLYERQLSDSS Trigger: GCTGGAGTCACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGCACGGGAGAGGCACTGGGAGCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR TCA 72 bp | GCTTGGCCCACGGTCATGTGTGTGTGTCACGCACAATaGGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AWPTVMCVCHAQ*VEVSWLQVESL Trigger: CAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACATGACCGTGGGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | AATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTaGCTGTCCTCGAGTCCTCTGCTTGTCCTCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NELKSPGSKLSL*LSSSPLLVLSP Trigger: GGGACTGAGGACAAGCAGAGGACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | AGGTTGGCTTTGAACTCACACAGATCCACATGCCTCTaGCTCTCCAAACACAGGTGCCACTATGCCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RLALNSHRSTCL*LSKHRCHYAWL Trigger: AAGCCAGGCATAGTGGCACCTGTGTTTGGAGAGGCAGAGGCATGTGGATCTGTGTGAGTTCAAAGCCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR CCA 72 bp | GCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATaGACTGATTCACCAGGATCCTGCTACACTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AIAIDGPRVPCR*TDSPGSCYTEG Trigger: GCCTTCAGTGTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | AGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTaGTACACTGAAGGCGCACAGTTGACCAGCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVPCRWTDSPGS*YTEGAQLTSLL Trigger: AAGAAGGCTGGTCAACTGTGCGCCTTCAGTGTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | AGAGTCTCGCTATGTAGTCCTTGCTGGCCTGGAACTTaGTATGTAGCCCAGGTTGGCTTTGAACTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: RVSLCSPCWPGT*YVAQVGFELTQ Trigger: CTGTGTGAGTTCAAAGCCAACCTGGGCTACATAGCAAGTTCCAGGCCAGCAAGGACTACATAGCGAGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR CCA 72 bp | TGCCTCTGCCTCTCCAAACACAGGTGCCACTATGCCTaGCTTGGGTGTAGGTTACTAATTAAAGGGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLCLSKHRCHYA*LGCRLLIKGTK Trigger: CTTTGTCCCTTTAATTAGTAACCTACACCCAAGCCAGGCATAGTGGCACCTGTGTTTGGAGAGGCAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | TCTGTGAGGCTCCAGGTTTGTAGAAGTCTTAAACTCTaGTCCCGGTCCCAGATCCTTCTAAGCCTTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SVRLQVCRSLKL*SRSQILLSLQT Trigger: AGTTTGAAGGCTTAGAAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCTACAAACCTGGAGCCTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CCA 72 bp | ATAATAAATGAGTGCTCCCAGTGCCTCTCCCGTGCCTaGTCTTCTTGGGGCCTTTATGAGAGGCAATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IINECSQCLSRA*SSWGLYERQLS Trigger: ACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGCACGGGAGAGGCACTGGGAGCACTCATTTATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | GACAAAGCTACACATTTGCTTGTCACCCTTAGCAGTTaGTATTACAGATTCTCATCTTGCTTCTCACTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: DKATHLLVTLSS*YYRFSSCFSLL Trigger: TAGCAGTGAGAAGCAAGATGAGAATCTGTAATAGCAACTGCTAAGGGTGACAAGCAAATGTGTAGCTTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR GCA 72 bp | TGTAGGTTACTAATTAAAGGGACAAAGCTACACATTTaGTTGTCACCCTTAGCAGTTGCTATTACAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CRLLIKGTKLHI*LSPLAVAITDS Trigger: AGAATCTGTAATAGCAACTGCTAAGGGTGACAAGCAAATGTGTAGCTTTGTCCCTTTAATTAGTAACCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| 3UTR CAA 72 bp | ACACGCAGCCACCTGCCTCGGCCAGCACCAACGTGGTaGTGCGGCACGACGGCGCTGTGCGCTGGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRSHLPRPAPTW*CGTTALCAGTH Trigger: GTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCACAACCACGTTGGTGCTGGCCGAGGCAGGTGGCTGCGTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | GTGCGGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGCCTGAACTCCATCCCTaGGACCCACAGACACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRHDGAVRWDAPAITRSSPELHP*DPQTPV Trigger: TACTGGTGTCTGTGGGTCTCAGGGATGGAGTTCAGG...CGAGCTGCGTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGGACGCACGGCGGGCACCAGCTGGATGTGCGACCTCGGGGCACTTCCGCCCTGCCACTGATTGTTaGCCTGAGCCCAGCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LMDARRAPAGCATSGHFRPATDC*PEPSHP Trigger: CGGATGGCTGGGCTCAGGCCAACAATCAGTGGCAGG...GCGGAAGTGCCCCGAGGTCGCACATCCAGCTGGTGCCCGCCGTGCGTCCATGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| 3UTR CAA 72 bp | GCACTTCCGCCAGTCTGGCCGACTTCGTGGAGAACGTaGAATGGCGTGTGCTGGGCATGCCAGCGCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVWPTSWRT*NGVCWACQRAG Trigger: GCCTGCGCGCTGGCATGCCCAGCACACGCCATTCAACGTTCTCCACGAAGTCGGCCAGACTGGCGGAAGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCGAGTCCTCTGCTTGTCCTCAGTCCCGTCCCTACATCCCTGGATGAGGGAGCGCGGAGGTAGATaGGTGCGGGACCCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPRVLCLSSVPSLHPWMRERGGR*VRDPGW Trigger: CCACCCAGGGTCCCGCACGCATCTACCTCCGCGCTC...CCTCATCCAGGGATGTAGGGACGGGACTGAGGACAAGCAGAGGACTCGAGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR TCA 90 bp | GACGCTCAGCGCTGTGGCCTGACCTTCGGCTCATGGACGCACGGCGGGCACCAGTATACTTTGTTGGCCTaGAACTCTGAGTGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAQRCGLTFGSWTHGGHQYTLLA*NSEWLR Trigger: TCTCAACCACTCAGAGTTTCAGGCCAACAAAGTATA...CTGGTGCCCGCCGTGCGTCCATGAGCCGAAGGTCAGGCCACAGCGCTGAGCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR GCA 90 bp | TCGATGTGTCTGGCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGAGCGCGGAGGTAGATaGGTGCGGGACCCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLAIAIDGPRVPCRWTERGGR*VRDPGW Trigger: CCACCCAGGGTCCCGCACGCATCTACCTCCGCGCTC...AGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGCCAGACACATCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCGAGTCCTCTGCTTGTCCTCAGTCCCGTCCCTACATCCCTGGATGAGGGAGACCTGGATTCTCTaGAAGGGCGCTCAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPRVLCLSSVPSLHPWMRETWIL*KGAQHK Trigger: CTTGTGCTGAGCGCCCTTCCAGAGAATCCAGGTCTC...CCTCATCCAGGGATGTAGGGACGGGACTGAGGACAAGCAGAGGACTCGAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR TCA 90 bp | GCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGACACGCACAGCTGCGTTaGACTCCTTGTGCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIAIDGPRVPCRWTDSPGHAQLR*TPCAGG Trigger: GCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTG...TCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | GCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGAGGGCGGCAACGTTCTTaGGGGACGCAGAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIAIDGPRVPCRWTDSPGGRQRS*GTQKQS Trigger: GCTTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCC...TCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTCCAGGTTTGTAGAAGTCTTAAACTCTGCTCCCGGTCCCAGATCCTTGGGCGGCAACGTTCTTaGGGGACGCAGAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLQVCRSLKLCSRSQILGRQRS*GTQKQS Trigger: GCTTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCC...AAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCTACAAACCTGGAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR GCA 90 bp | GCGTTCCACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGAAGGCTGGCGTTGAACTCCTTGTaGAGGGGGCTGTTGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFHSSVSLRVSSFQNRRLALNSL*RGLLAV Trigger: CACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGC...CAGCCTTCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTGGAACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | GCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGACCTGCCACTGATTGTTaGCCTGAGCCCAGCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIAIDGPRVPCRWTDSPGPATDC*PEPSHP Trigger: CGGATGGCTGGGCTCAGGCCAACAATCAGTGGCAGG...TCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCTTAAACTCTGCTCCCGGTCCCAGATCCTTCTAAGCCTTCAAACTCTGCACGCACAGCTGCGTTaGACTCCTTGTGCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLKLCSRSQILLSLQTLHAQLR*TPCAGG Trigger: GCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTG...CAGAGTTTGAAGGCTTAGAAGGATCTGGGACCGGGAGCAGAGTTTAAGACTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | AATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTGCCTGTCCTCGAGTCCTGTCATCAAAGGACGCTaGGGCCATGTCCAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NELKSPGSKLSLCLSSSPVIKGR*GHVQGC Trigger: ACACCCCTGGACATGGCCCCAGCGTCCTTTGATGAC...AGGACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTGCTACGTCATCAAAGGACGCTaGGGCCATGTCCAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IDGPRVPCRWTDSPGSCYVIKGR*GHVQGC Trigger: ACACCCCTGGACATGGCCCCAGCGTCCTTTGATGAC...GTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCTTCTTGGGGCCTTTATGAGAGGCAATTAAGTGACTCCAGCTTGGCCAGGCAGCCAGCATACTaGTCATCAAAGGACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AWSSWGLYERQLSDSSLARQPAY*SSKDAG Trigger: CCCAGCGTCCTTTGATGACCAGTATGCTGGCTGCCT...GGCCAAGCTGGAGTCACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCTTCTTGGGGCCTTTATGAGAGGCAATTAAGTGACTCCAGCTTGGCCAGCAGGAAGCAGAAATaGAGCCTGGGGCTGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AWSSWGLYERQLSDSSLASRKQK*SLGLSY Trigger: GTAGCTCAGCCCCAGGCTCCATTTCTGCTTCCTGCT...GGCCAAGCTGGAGTCACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTAGGCTCTCCCGGGAGGGAACTCACTGTCTAGTTTCCAAAACAGAAGGCGAGACCTGGATTCTCTaGAAGGGCGCTCAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TARLSREGTHCLVSKTEGETWIL*KGAQHK Trigger: CTTGTGCTGAGCGCCCTTCCAGAGAATCCAGGTCTC...GCCTTCTGTTTTGGAAACTAGACAGTGAGTTCCCTCCCGGGAGAGCCTAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| CDS-3UTR GCA 90 bp | TGTCTGGCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACGCCTCACGCACAGCTaGGTTGAACTCCTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLAIAIDGPRVPCRWTDSRLTHS*VELLVQ Trigger: CTGCACAAGGAGTTCAACGCAGCTGTGCGTGAGGCG...TGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGCCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CCA 90 bp | GCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGAAGGCAGCCAGCATACTaGTCATCAAAGGACGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIAIDGPRVPCRWTDSPGRQPAY*SSKDAG Trigger: CCCAGCGTCCTTTGATGACCAGTATGCTGGCTGCCT...TCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CCA 90 bp | TCCTCAGTCCCGTCCCTACATCCCTGGATGAGGTTCAGTCTCCAAATTCTCTTCAGCAGGAAGCAGAAATaGAGCCTGGGGCTGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPSLHPWMRFSLQILFSRKQK*SLGLSY Trigger: GTAGCTCAGCCCCAGGCTCCATTTCTGCTTCCTGCT...GAAGAGAATTTGGAGACTGAACCTCATCCAGGGATGTAGGGACGGGACTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| CDS-3UTR CCA 90 bp | AATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTGCCTGTCCTCGAGTCCTGAGACCTGGATTCTCTaGAAGGGCGCTCAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NELKSPGSKLSLCLSSSPETWIL*KGAQHK Trigger: CTTGTGCTGAGCGCCCTTCCAGAGAATCCAGGTCTC...AGGACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTCTTCTTGGGGCCTTTATGAGAGGCAATTAAGTGACTCCAGCTTGGCCCATCGGGTAAGTTGCTaGAGACCTGGATTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWSSWGLYERQLSDSSLAHRVSC*RPGFSG Trigger: TCCAGAGAATCCAGGTCTCCAGCAACTTACCCGATG...GGCCAAGCTGGAGTCACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCAGTTGGCCTGAAACTCTaGGTGGTTGAGATCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLAIAIDGPRVPCRWTDSVGLKL*VVEIWQ Trigger: CTGCCAGATCTCAACCACTCAGAGTTTCAGGCCAAC...TGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGCCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | CACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGAGTTGGCCTGAAACTCTaGGTGGTTGAGATCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSVSLRVSSFQNRRLCRVGLKL*VVEIWQ Trigger: CTGCCAGATCTCAACCACTCAGAGTTTCAGGCCAAC...TCTGCACAGCCTTCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAAATTCTCTTCTCTGTCTCTATCGATGTGTCTGGCAATTGCCATAGACGCGTTGAACTCCTTGTaGAGGGGGCTGTTGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKFSSLSLSMCLAIAIDALNSL*RGLLAV Trigger: CACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGC...GTCTATGGCAATTGCCAGACACATCGATAGAGACAGAGAAGAGAATTTGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR TCA 90 bp | ATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTGCTACTGGGTCGGCTTGTATTaGTCACCTGGAAAGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IDGPRVPCRWTDSPGSCYWVGLY*SPGKFR Trigger: TCGAAACTTTCCAGGTGATCAATACAAGCCGACCCA...GTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTCACGCACAATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCCTTGTATTGATCACCTaGACTCCATCCCTGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVTHNELKSPGSKLSLLVLIT*TPSLRP Trigger: GGGTCTCAGGGATGGAGTTCAGGTGATCAATACAAG...GAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCGTTCCACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGACATCGGGTAAGTTGCTaGAGACCTGGATTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRAFHSSVSLRVSSFQNRHRVSC*RPGFSG Trigger: TCCAGAGAATCCAGGTCTCCAGCAACTTACCCGATG...TCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTGGAACGCTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAAATTCTCTTCTCTGTCTCTATCGATGTGTCTGGCAATTGCCATAGACCCTGAACTCCATCCCTaGGACCCACAGACACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSKFSSLSLSMCLAIAIDPELHP*DPQTPV Trigger: TACTGGTGTCTGTGGGTCTCAGGGATGGAGTTCAGG...GTCTATGGCAATTGCCAGACACATCGATAGAGACAGAGAAGAGAATTTGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGTCTTCTTGGGGCCTTTATGAGAGGCAATTAAGTGACTCCAGCTTGGCCTCCAGGGGTGTTTCTTaGGAAAAGATGTCTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWSSWGLYERQLSDSSLASRGVS*EKMSSC Trigger: ACAACTAGACATCTTTTCTCAAGAAACACCCCTGGA...GGCCAAGCTGGAGTCACTTAATTGCCTCTCATAAAGGCCCCAAGAAGACCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR TCA 90 bp | CACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGATGGGTCGGCTTGTATTaGTCACCTGGAAAGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSVSLRVSSFQNRRLCRWVGLY*SPGKFR Trigger: TCGAAACTTTCCAGGTGATCAATACAAGCCGACCCA...TCTGCACAGCCTTCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTCACGCACAATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCCCGCGTATACTTTGTTaGCCTGAAACTCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVTHNELKSPGSKLSLPRILC*PETLSG Trigger: ACCACTCAGAGTTTCAGGCCAACAAAGTATACGCGG...GAGACTCAACTTGGAGCCAGGAGACTTCAACTCATTGTGCGTGACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR TCA 90 bp | ATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTCCAGGGGTGTTTCTTaGGAAAAGATGTCTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IAIDGPRVPCRWTDSPGSSRGVS*EKMSSC Trigger: ACAACTAGACATCTTTTCTCAAGAAACACCCCTGGA...GGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAAATTCTCTTCTCTGTCTCTATCGATGTGTCTGGCAATTGCCATAGACCATCGGGTAAGTTGCTaGAGACCTGGATTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSKFSSLSLSMCLAIAIDHRVSC*RPGFSG Trigger: TCCAGAGAATCCAGGTCTCCAGCAACTTACCCGATG...GTCTATGGCAATTGCCAGACACATCGATAGAGACAGAGAAGAGAATTTGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
||
| CDS-3UTR TCA 90 bp | TTACTAATTAAAGGGACAAAGCTACACATTTGCTTGTCACCCTTAGCAGTTGCTCCTGAACTCCATCCCTaGGACCCACAGACACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLIKGTKLHICLSPLAVAPELHP*DPQTPV Trigger: TACTGGTGTCTGTGGGTCTCAGGGATGGAGTTCAGG...AGCAACTGCTAAGGGTGACAAGCAAATGTGTAGCTTTGTCCCTTTAATTAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAAATTCTCTTCTCTGTCTCTATCGATGTGTCTGGCAATTGCCATAGACTATACTTTGTTGGCCTaGAACTCTGAGTGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSKFSSLSLSMCLAIAIDYTLLA*NSEWLR Trigger: TCTCAACCACTCAGAGTTTCAGGCCAACAAAGTATA...GTCTATGGCAATTGCCAGACACATCGATAGAGACAGAGAAGAGAATTTGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CAA 90 bp | GGCACGACGGCGCTGTGCGCTGGGACGCACCGGCCATCACACGCAGCTCGTGCCGGTGTCCTCGCCAAATaGTTGGGCGGCAACGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTTALCAGTHRPSHAARAGVLAK*LGGNVL Trigger: AAGAACGTTGCCGCCCAACAATTTGGCGAGGACACC...GGCACGAGCTGCGTGTGATGGCCGGTGCGTCCCAGCGCACAGCGCCGTCGTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
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| CDS TCA 90 bp | GGAGGTAATGGGCCCGAGAACGTCCCGCCTCACGCACAGCTGCGTTaGACTCCTTGTGCAGGGGGCTGTTGGCGGTGTAGGCCAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGNGPENVPPHAQLR*TPCAGGCWRCRPAA Trigger: CGCTGCTGGCCTACACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGAGGCGGGACGTTCTCGGGCCCATTACCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS GCA 90 bp | GTGGTGGAGGTAATGGGCCCGAGAACGTCCCGCCTCACGCACAGCTaGGTTGAACTCCTTGTGCAGGGGGCTGTTGGCGGTGTAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVEVMGPRTSRLTHS*VELLVQGAVGGVGQ Trigger: CTGGCCTACACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGAGGCGGGACGTTCTCGGGCCCATTACCTCCACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS GCA 90 bp | CTGTACACCTGCTGGCACCCGCGAGATCGGTGGCTCCGGAGCAGTTaGAGGGCCTCGGTGAGCAGGAAGTGGAGGGTCTTGAAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYTCWHPRDRWLRSS*RASVSRKWRVLKEK Trigger: CTTCTCCTTCAAGACCCTCCACTTCCTGCTCACCGAGGCCCTGCAACTGCTCCGGAGCCACCGATCTCGCGGGTGCCAGCAGGTGTACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS CCA 90 bp | AGCCCCACACGGACCCCCAGGCCCTGCGCTCCTGCCACTGATTGTTaGCCTGAGCCCAGCCATCCGCGTATACTTTGTTGGCCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SPTRTPRPCAPATDC*PEPSHPRILCWPET Trigger: AGTTTCAGGCCAACAAAGTATACGCGGATGGCTGGGCTCAGGCCAACAATCAGTGGCAGGAGCGCAGGGCCTGGGGGTCCGTGTGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS TCA 90 bp | GGCCTGAGCCCAGCCATCCGCGTATACTTTGTTGGCCTGAAACTCTaGGTGGTTGAGATCTGGCAGGGCCGCTGTCATGTCTGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSPAIRVYFVGLKL*VVEIWQGRCHVCQA Trigger: TGCCTGGCAGACATGACAGCGGCCCTGCCAGATCTCAACCACTCAGAGTTTCAGGCCAACAAAGTATACGCGGATGGCTGGGCTCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS GCA 90 bp | ACAGTTGTATGTACTGCGTTTGCCCAGAGCGCGGAGGTAGATGCGTaGGGGACCCTGGGTGGGTCGGCTTGTATTGATCACCTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVVCTAFAQSAEVDA*GTLGGSACIDHLNS Trigger: GGAGTTCAGGTGATCAATACAAGCCGACCCACCCAGGGTCCCGCACGCATCTACCTCCGCGCTCTGGGCAAACGCAGTACATACAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| CDS GCA 90 bp | ACAGTTGTATGTACTGCGTTTGCCCAGAGCGCGGAGGTAGATGCGTaGGGGACCCTGGGTGGGTCGGCTTGTATTGATCACCTGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVVCTAFAQSAEVDA*GTLGGSACIDHLES Trigger: ACTTTCCAGGTGATCAATACAAGCCGACCCACCCAGGGTCCCGCACGCATCTACCTCCGCGCTCTGGGCAAACGCAGTACATACAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CAA 90 bp | ATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTGCTACGCTGCGTTGAACTCCTaGTGCAGGGGGCTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IDGPRVPCRWTDSPGSCYAALNS*CRGLLA Trigger: CGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGC...GTAGCAGGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CAA 90 bp | AATGAGTTGAAGTCTCCTGGCTCCAAGTTGAGTCTCTGCCTGTCCTCGAGTCCTTCACGCACAGCTGCGTaGAACTCCTTGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NELKSPGSKLSLCLSSSPSRTAA*NSLCRG Trigger: CCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGA...AGGACTCGAGGACAGGCAGAGACTCAACTTGGAGCCAGGAGACTTCAACTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS-3UTR CAA 90 bp | CACTCATCGGTGAGTCTGAGGGTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGATCACGCACAGCTGCGTaGAACTCCTTGTGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSVSLRVSSFQNRRLCRSRTAA*NSLCRG Trigger: CCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGA...TCTGCACAGCCTTCTGTTTTGGAAACTAGACACCCTCAGACTCACCGATGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209809.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCACCAGGATCCTGGGCGGCAACGTTCTaGAGGGACGCAGAAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IAIDGPRVPCRWTDSPGSWAATF*RDAEAK Trigger: CTTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCCA...GGATCCTGGTGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAAATTCTCTTCTCTGTCTCTATCGATGTGTCTGGCAATTGCCATAGACGCTGCGTTGAACTCCTaGTGCAGGGGGCTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSKFSSLSLSMCLAIAIDAALNS*CRGLLA Trigger: CGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGC...GTCTATGGCAATTGCCAGACACATCGATAGAGACAGAGAAGAGAATTTGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGCAATTGCCATAGACGGTCCCAGAGTTCCCTGTAGATGGACTGATTCAGGTGTCCTCGCCAAATaGTTGGGCGGCAACGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLAIAIDGPRVPCRWTDSGVLAK*LGGNVL Trigger: AAGAACGTTGCCGCCCAACAATTTGGCGAGGACACC...TGAATCAGTCCATCTACAGGGAACTCTGGGACCGTCTATGGCAATTGCCAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS TCA 72 bp | GGGCCCGAGAACGTCCCGCCTCACGCACAGCTGCGTTaGACTCCTTGTGCAGGGGGCTGTTGGCGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPENVPPHAQLR*TPCAGGCWRCR Trigger: CCTACACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGAGGCGGGACGTTCTCGGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS CAA 72 bp | CTGCTGGCACCCGCGAGATCGGTGGCTCCGGAGCAGTaGCAGGGCCTCGGTGAGCAGGAAGTGGAGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLAPARSVAPEQ*QGLGEQEVEGL Trigger: AAGACCCTCCACTTCCTGCTCACCGAGGCCCTGCAACTGCTCCGGAGCCACCGATCTCGCGGGTGCCAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS GCA 72 bp | GTAATGGGCCCGAGAACGTCCCGCCTCACGCACAGCTaGGTTGAACTCCTTGTGCAGGGGGCTGTTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: VMGPRTSRLTHS*VELLVQGAVGG Trigger: ACCGCCAACAGCCCCCTGCACAAGGAGTTCAACGCAGCTGTGCGTGAGGCGGGACGTTCTCGGGCCCATTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS CCA 72 bp | CGGACCCCCAGGCCCTGCGCTCCTGCCACTGATTGTTaGCCTGAGCCCAGCCATCCGCGTATACTTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTPRPCAPATDC*PEPSHPRILCW Trigger: CCAACAAAGTATACGCGGATGGCTGGGCTCAGGCCAACAATCAGTGGCAGGAGCGCAGGGCCTGGGGGTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS CAA 90 bp | CCTGTACACCTGCTGGCACCCGCGAGATCGGTGGCTCCGGAGCAGTaGCAGGGCCTCGGTGAGCAGGAAGTGGAGGGTCTTGAAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVHLLAPARSVAPEQ*QGLGEQEVEGLEGE Trigger: TTCTCCTTCAAGACCCTCCACTTCCTGCTCACCGAGGCCCTGCAACTGCTCCGGAGCCACCGATCTCGCGGGTGCCAGCAGGTGTACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS CCA 72 bp | AGGGCCGCTGTCATGTCTGCCAGGCAGCCAGCATACTaGTCATCAAAGGACGCTGGGGCCATGTCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RAAVMSARQPAY*SSKDAGAMSRG Trigger: ACCCCTGGACATGGCCCCAGCGTCCTTTGATGACCAGTATGCTGGCTGCCTGGCAGACATGACAGCGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS CAA 90 bp | GGCCCCAAGGCAGGTCCAGATACCGAAGAAGGTGTCCTCGCCAAATaGTTGGGCGGCAACGTTCTTGAGGGACGCAGAAGCAAAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPKAGPDTEEGVLAK*LGGNVLEGRRSKAP Trigger: GGGGGCTTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCCAACAATTTGGCGAGGACACCTTCTTCGGTATCTGGACCTGCCTTGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
||
| CDS TCA 72 bp | GCGGGACCCTGGGTGGGTCGGCTTGTATTGATCACCTaGACTCCATCCCTGAGACCCACAGACACCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPWVGRLVLIT*TPSLRPTDTSR Trigger: CCTACTGGTGTCTGTGGGTCTCAGGGATGGAGTTCAGGTGATCAATACAAGCCGACCCACCCAGGGTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210211.2 |
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| CDS CCA 72 bp | GCGGGACCCTGGGTGGGTCGGCTTGTATTGATCACCTaGAAAGTTTCGAAAGGAGGGATCAGCACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGPWVGRLVLIT*KVSKGGISTSS Trigger: GGAGGAGGTGCTGATCCCTCCTTTCGAAACTTTCCAGGTGATCAATACAAGCCGACCCACCCAGGGTCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS CAA 72 bp | GCAGGTCCAGATACCGAAGAAGGTGTCCTCGCCAAATaGTTGGGCGGCAACGTTCTTGAGGGACGCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AGPDTEEGVLAK*LGGNVLEGRRS Trigger: GCTTCTGCGTCCCTCAAGAACGTTGCCGCCCAACAATTTGGCGAGGACACCTTCTTCGGTATCTGGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS TCA 72 bp | CCAGCCATCCGCGTATACTTTGTTGGCCTGAAACTCTaGGTGGTTGAGATCTGGCAGGGCCGCTGTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: PAIRVYFVGLKL*VVEIWQGRCHV Trigger: GACATGACAGCGGCCCTGCCAGATCTCAACCACTCAGAGTTTCAGGCCAACAAAGTATACGCGGATGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS TCA 72 bp | AGATGCGTGCGGGACCCTGGGTGGGTCGGCTTGTATTaGTCACCTGGAAAGTTTCGAAAGGAGGGATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCVRDPGWVGLY*SPGKFRKEGSA Trigger: TGCTGATCCCTCCTTTCGAAACTTTCCAGGTGATCAATACAAGCCGACCCACCCAGGGTCCCGCACGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS CCA 72 bp | GTCCAGATACCGAAGAAGGTGTCCTCGCCAAATTGTTaGGCGGCAACGTTCTTGAGGGACGCAGAAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VQIPKKVSSPNC*AATFLRDAEAK Trigger: CTTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCCAACAATTTGGCGAGGACACCTTCTTCGGTATCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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| CDS CCA 72 bp | TCAACATCGGGTAAGTTGCTGGAGACCTGGATTCTCTaGAAGGGCGCTCAGCACAAGGAACAAGAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: STSGKLLETWIL*KGAQHKEQEQQ Trigger: CTGCTGCTCTTGTTCCTTGTGCTGAGCGCCCTTCCAGAGAATCCAGGTCTCCAGCAACTTACCCGATGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 ENSMUST00000210211.2 |
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| CDS CAA 72 bp | GGTCCAGATACCGAAGAAGGTGTCCTCGCCAAATTGTaGGGCGGCAACGTTCTTGAGGGACGCAGAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GPDTEEGVLAKL*GGNVLEGRRSK Trigger: TTTGCTTCTGCGTCCCTCAAGAACGTTGCCGCCCAACAATTTGGCGAGGACACCTTCTTCGGTATCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033300.4 ENSMUST00000209809.2 |
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