Pregenerated sensors for ARSK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021592Ensembl transcript IDs: ENSMUST00000120573.3, ENSMUST00000223579.3, ENSMUST00000239063.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGGGACAAAAGAGAATACTACATGTGGCACTGGGCCCCAGGTTaGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: SWDKREYYMWHWAPG*QDVYMEEAEDSERT Trigger: AGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATTCTCTTTTGTCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 90 bp | GCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATaGGACCTGGATACGGTCAATCAGATCAGAGGAGGAAAAATGATG | + |
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Preference number: 1 (lower is better) Translates to: AGRLHGRSRRLRKDS*DLDTVNQIRGGKMM Trigger: CATCATTTTTCCTCCTCTGATCTGATTGACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR GCA 90 bp | TCCCCTGAATTGGAGTTACACACAAGTTGTGAGCCACTGTGTGGGTaGCAATACTTGGATCTTAGTCCTCTGATGAGTAGCAAGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SPELELHTSCEPLCG*QYLDLSPLMSSKSF Trigger: AAAGGACTTGCTACTCATCAGAGGACTAAGATCCAAGTATTGGCACCCACACAGTGGCTCACAACTTGTGTGTAACTCCAATTCAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR GCA 90 bp | AGGGATAAGATTAATTATGGGTCTGCCTTCTTGTCGGAGCAAGAATaGAACATCTCTTGTCCATGCTTCCACACGGTTACTAATGGAATG | + |
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Preference number: 1 (lower is better) Translates to: RDKINYGSAFLSEQE*NISCPCFHTVTNGM Trigger: CATTCCATTAGTAACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCTTGCTCCGACAAGAAGGCAGACCCATAATTAATCTTATCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| 3UTR GCA 90 bp | GACTATAGCTTGTTCACAATAAGATACAAGCAAGGAGATTGTGGTTaGCCTTTGAAGGAAGTTAACCAGGAAAGGAAGGGGACTTCATAT | + |
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Preference number: 1 (lower is better) Translates to: DYSLFTIRYKQGDCG*PLKEVNQERKGTSY Trigger: ATATGAAGTCCCCTTCCTTTCCTGGTTAACTTCCTTCAAAGGGCAACCACAATCTCCTTGCTTGTATCTTATTGTGAACAAGCTATAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAGAGAAGAGTGGGCTATaGGTCACTGGTCACTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GILGGQKRALAPLNWSYTEKSGL*VTGHWS Trigger: ACTCCAGTGACCAGTGACTCATAGCCCACTCTTCTC...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGTGGGATGCTAACCACTaGTGGACTGGAGAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKWDANH*WTGEEW Trigger: CCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACACTGGTGGATTGAAGTaGGATGCTAACCACTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDTGGLK*DANHWW Trigger: CCACCAGTGGTTAGCATCCCACTTCAATCCACCAGT...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGACCTATTGGTGGGAATaGCAACAGCTGGCACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKTYWWE*QQLALL Trigger: AAGAAGTGCCAGCTGTTGGCATTCCCACCAATAGGT...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTACTACATGTTTACCTaGCATCCTTGGAGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDYYMFT*HPWRPE Trigger: TTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTA...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGAGGACTCATGGGACCTaGATACGGTCAATCAGATCA | + |
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Preference number: 2 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKRTHGT*IRSIRS Trigger: TGATCTGATTGACCGTATCCAGGTCCCATGAGTCCT...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACCAAGGAGATTGTGGTTaGCCTTTGAAGGAAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDQGDCG*PLKEVN Trigger: GTTAACTTCCTTCAAAGGGCAACCACAATCTCCTTG...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTTGGGATGCTAACCACTaGTGGACTGGAGAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: STWKKQKTQKGLMGPGYGWDANH*WTGEEW Trigger: CCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTTTATTATTGTCTACTaGTACTGGAGAAGAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDFIIVY*YWRRVG Trigger: GCCTACTCTTCTCCAGTAGCAGTAGACAATAATAAA...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGGAGCCACTGTGTGGGTaGCAATACTTGGATCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: CLCTTCLPGILGGQKRALEPLCG*QYLDLS Trigger: ACTAAGATCCAAGTATTGGCACCCACACAGTGGCTC...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCAAGGAGATTGTGGTTaGCCTTTGAAGGAAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTQGDCG*PLKEVN Trigger: GTTAACTTCCTTCAAAGGGCAACCACAATCTCCTTG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTGGGAATGCCAACAGCTaGCACTTCTTTAGAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: STWKKQKTQKGLMGPGYGGNANS*HFFRNN Trigger: GTTGTTTCTAAAGAAGTGCCAGCTGTTGGCATTCCC...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTAAACTGTCAGAGGTCTaGAACAATAAGGTCTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: STWKKQKTQKGLMGPGYGKLSEV*NNKVLV Trigger: TACTAAGACCTTATTGTTGCAGACCTCTGACAGTTT...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGCCTTCTTGTCGGAGCAAGAATGCAACATCTCTTGTCCATGCTTCCACCATGTCGTATAATTTaGATCCAGACCCTTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: WVCLLVGARMQHLLSMLPPCRII*IQTLKI Trigger: AATTTTAAGGGTCTGGATCCAAATTATACGACATGG...TGGAAGCATGGACAAGAGATGTTGCATTCTTGCTCCGACAAGAAGGCAGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| 3UTR-3UTR TCA 90 bp | ATAAGATTAATTATGGGTCTGCCTTCTTGTCGGAGCAAGAATGCAACATCTCTTAGCCATGCTTCTCCATaGTGTCCATCCATGTCGTAT | + |
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Preference number: 2 (lower is better) Translates to: IRLIMGLPSCRSKNATSLSHASP*CPSMSY Trigger: ATACGACATGGATGGACATCATGGAGAAGCATGGCT...AAGAGATGTTGCATTCTTGCTCCGACAAGAAGGCAGACCCATAATTAATCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGGTGTATATGCCTGCATaGATGTGTAAAGAATATATC | + |
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Preference number: 2 (lower is better) Translates to: CLCTTCLPGILGGQKRALVYMPA*MCKEYI Trigger: GATATATTCTTTACACATGCATGCAGGCATATACAC...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGTGGACTGGAGAAGAGTaGGCTATGAGTCACTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRWTGEE*AMSHWS Trigger: TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCA...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CAA 90 bp | AGCTTGTTCACAATAAGATACAAGCAAGGAGATTGTGGTTGCCCTTaGAAGGAAGTTAACCAGGAAAGGAAGGGGACTTCATATTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLFTIRYKQGDCGCP*KEVNQERKGTSYSF Trigger: AAAAGAATATGAAGTCCCCTTCCTTTCCTGGTTAACTTCCTTCAAAGGGCAACCACAATCTCCTTGCTTGTATCTTATTGTGAACAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CAA 90 bp | GCATGCATGTGTAAAGAATATATCCATTTGGTTGGTGACTATAGCTaGTTCACAATAAGATACAAGCAAGGAGATTGTGGTTGCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ACMCKEYIHLVGDYS*FTIRYKQGDCGCPL Trigger: CAAAGGGCAACCACAATCTCCTTGCTTGTATCTTATTGTGAACAAGCTATAGTCACCAACCAAATGGATATATTCTTTACACATGCATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CAA 90 bp | CCTATTGGTGGGAATGCCAACAGCTGGCACTTCTTTAGAAACAACTaGGGAAAATCTACAGACATTTTTATAGATTCTGGTTCAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: PIGGNANSWHFFRNN*GKSTDIFIDSGSAI Trigger: AATTGCTGAACCAGAATCTATAAAAATGTCTGTAGATTTTCCCAAGTTGTTTCTAAAGAAGTGCCAGCTGTTGGCATTCCCACCAATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | TGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATaGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGA | + |
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Preference number: 3 (lower is better) Translates to: CGTGPQVGRTST*KKQKTQKGLMG Trigger: TCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGGTTTACCTGGCATCCTaGGAGGCCAGAAAAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKVYLAS*EARKEH Trigger: GTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAAC...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | GCTACTGGTGGATTGAAGTGGGATGCTAACCACTGGTaGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: ATGGLKWDANHW*TGEEWAMSHWS Trigger: TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCACTTCAATCCACCAGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | CTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTaGAGTTACACACAAGTTGTGAGCCACTGTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LGGQKRALAPLN*SYTQVVSHCVG Trigger: ACCCACACAGTGGCTCACAACTTGTGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGTGTGGGTGCCAATACTaGGATCTTAGTCCTCTGATG | + |
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Preference number: 3 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKCGCQY*DLSPLM Trigger: CATCAGAGGACTAAGATCCAAGTATTGGCACCCACA...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | AGTAGCTGGGACAAAAGAGAATACTACATGTGGCACTaGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: SSWDKREYYMWH*APGWQDVYMEE Trigger: TTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATTCTCTTTTGTCCCAGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | CCTGACTGCATTTTGTCTGTGTACTACATGTTTACCTaGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PDCILSVYYMFT*HPWRPEKSTGS Trigger: GGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACAAAATGCAGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGAATATTTGCTACCTATaGGTGGGAATGCCAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKNICYL*VGMPTA Trigger: AGCTGTTGGCATTCCCACCAATAGGTAGCAAATATT...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR CCA 72 bp | CTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATaGGACCTGGATACGGTCAATCAGATCAGAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LHGRSRRLRKDS*DLDTVNQIRGG Trigger: TCCTCCTCTGATCTGATTGACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTTGTGGGTGCCAATACTaGGATCTTAGTCCTCTGATG | + |
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Preference number: 3 (lower is better) Translates to: STWKKQKTQKGLMGPGYGCGCQY*DLSPLM Trigger: CATCAGAGGACTAAGATCCAAGTATTGGCACCCACA...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGGTTGGTGACTATAGCTaGTTCACAATAAGATACAAG | + |
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Preference number: 3 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKVGDYS*FTIRYK Trigger: CTTGTATCTTATTGTGAACAAGCTATAGTCACCAAC...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAATAGCACATTATCAATaGTGTATATGCCTGCATGCA | + |
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Preference number: 3 (lower is better) Translates to: GILGGQKRALAPLNWSYTIAHYQ*CICLHA Trigger: TGCATGCAGGCATATACACAATTGATAATGTGCTAT...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR GCA 72 bp | TTGGAGTTACACACAAGTTGTGAGCCACTGTGTGGGTaGCAATACTTGGATCTTAGTCCTCTGATGAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: LELHTSCEPLCG*QYLDLSPLMSS Trigger: GCTACTCATCAGAGGACTAAGATCCAAGTATTGGCACCCACACAGTGGCTCACAACTTGTGTGTAACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTAATATTTGCTACCTATaGGTGGGAATGCCAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: STWKKQKTQKGLMGPGYGNICYL*VGMPTA Trigger: AGCTGTTGGCATTCCCACCAATAGGTAGCAAATATT...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGTGTCCTGACTGCATTTaGTCTGTGTACTACATGTTT | + |
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Preference number: 3 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTCPDCI*SVYYMF Trigger: AAACATGTAGTACACAGACAAAATGCAGTCAGGACA...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR TCA 72 bp | TATTATTGTCTACTGCTACTGGAGAAGAGTAGGCTGTaGGCTACTGGTGGATTGAAGTGGGATGCTAACCAC | + |
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Preference number: 3 (lower is better) Translates to: YYCLLLLEKSRL*ATGGLKWDANH Trigger: GTGGTTAGCATCCCACTTCAATCCACCAGTAGCTCACAGCCTACTCTTCTCCAGTAGCAGTAGACAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGATAGCACATTATCAATaGTGTATATGCCTGCATGCA | + |
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Preference number: 3 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTIAHYQ*CICLHA Trigger: TGCATGCAGGCATATACACAATTGATAATGTGCTAT...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR GCA 72 bp | ATTAATTATGGGTCTGCCTTCTTGTCGGAGCAAGAATaGAACATCTCTTGTCCATGCTTCCACACGGTTACT | + |
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Preference number: 3 (lower is better) Translates to: INYGSAFLSEQE*NISCPCFHTVT Trigger: AGTAACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCTTGCTCCGACAAGAAGGCAGACCCATAATTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| 3UTR-3UTR CAA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTATAGTGGGAGTCGTTTaGATGCAAATTTTAGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: STWKKQKTQKGLMGPGYGIVGVV*MQILVV Trigger: AACCACTAAAATTTGCATCAAAACGACTCCCACTAT...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| 3UTR GCA 72 bp | TTGTTCACAATAAGATACAAGCAAGGAGATTGTGGTTaGCCTTTGAAGGAAGTTAACCAGGAAAGGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFTIRYKQGDCG*PLKEVNQERKG Trigger: CCCCTTCCTTTCCTGGTTAACTTCCTTCAAAGGGCAACCACAATCTCCTTGCTTGTATCTTATTGTGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR TCA 72 bp | TTCCAAATTTCTGTGTCTGATAGCCATGCTTCTCCATaGTGTCCATCCATGTCGTATAATTTGGATCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FQISVSDSHASP*CPSMSYNLDPD Trigger: GTCTGGATCCAAATTATACGACATGGATGGACATCATGGAGAAGCATGGCTATCAGACACAGAAATTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| 3UTR GCA 72 bp | CTATATAGCACATTATCAATTGTGTATATGCCTGCATaGATGTGTAAAGAATATATCCATTTGGTTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LYSTLSIVYMPA*MCKEYIHLVGD Trigger: GTCACCAACCAAATGGATATATTCTTTACACATGCATGCAGGCATATACACAATTGATAATGTGCTATATAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACCATCGAAGGAGTCACTaGCGACCAGCACCACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDHRRSH*RPAPRW Trigger: CCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATG...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACGCCAGTGGACTGGAGTaGGCTGTGAGCCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDASGLE*AVSQCW Trigger: CCAACATTGGCTCACAGCCCACTCCAGTCCACTGGC...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACACTGGTGGACTGGGTTaGGCTGCTAGCCAGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDTGGLG*AASQWT Trigger: AGTCCACTGGCTAGCAGCCCAACCCAGTCCACCAGT...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGTGGACTGGGGAAGAGTaGGCTGTGAGCCACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKWTGEE*AVSHWW Trigger: CCACCAGTGGCTCACAGCCCACTCTTCCCCAGTCCA...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAACTGGTGGACTGGGTTaGGCTGCTAGCCAGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTTGGLG*AASQWT Trigger: AGTCCACTGGCTAGCAGCCCAACCCAGTCCACCAGT...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGTTTTCTTCTGTGTTCTaGGGGCCGGTGCTGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKFSSVF*GPVLRV Trigger: CACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAA...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | CCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATaGGAGTTACACACAAGTTGTGAGCCACTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWRPEKSTGSPE*ELHTSCEPLCG Trigger: CCCACACAGTGGCTCACAACTTGTGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGCCAGTGGACTGGAGTaGGCTGTGAGCCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTASGLE*AVSQCW Trigger: CCAACATTGGCTCACAGCCCACTCCAGTCCACTGGC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACACAAGATTCTGTCAAGTaGGTGAAGAGGCCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTQDSVK*VKRPLH Trigger: GTGGAGTGGCCTCTTCACTCACTTGACAGAATCTTG...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCATCTCTCTGCCAATCTTaGTGCCATCTGAGGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSSLCQS*CHLRCA Trigger: AGCACACCTCAGATGGCATCAAGATTGGCAGAGAGA...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTCATCGAAGGAGTCACTaGCGACCAGCACCACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGHRRSH*RPAPRW Trigger: CCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATG...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACGTTGGCCTTAATTCCTaGTCCCATCATCAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDVGLNS*SHHQKR Trigger: CCTCTTCTGATGATGGGACCAGGAATTAAGGCCAAC...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAATTCTGTCAAGTGAGTaGAGAGGCCACTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTILSSE*RGHSTL Trigger: CAATGTGGAGTGGCCTCTTCACTCACTTGACAGAAT...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAAGCCATGCTTCTCCATaGTGTCCATCCATGTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSSHASP*CPSMSY Trigger: ATACGACATGGATGGACATCATGGAGAAGCATGGCT...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCACACAGGGTGCATTTGTaGCAAAGTCAACCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSHRVHL*QSQPLW Trigger: CCAAAGTGGTTGACTTTGTCACAAATGCACCCTGTG...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAGTGGACGGTGGAATTTaGATGCCTGTTCATTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSVDGGI*MPVHLQ Trigger: CTGCAAATGAACAGGCATTCAAATTCCACCGTCCAC...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGGGCGCCTGGTTCACTTaGATCCTTTTCTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKGAWFT*ILFFCV Trigger: AACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCC...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACGCTTTGTCTGTATTCTaGCAGTCCTTGGTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDALSVF*QSLVIT Trigger: AGTGATGACCAAGGACTGGCAGAATACAGACAAAGC...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGTTTTCTTCTGTGTTCTaGGGGCCGGTGCTGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALFSSVF*GPVLRV Trigger: CACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAA...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGGTTGGCCTTAATTCCTaGTCCCATCATCAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKVGLNS*SHHQKR Trigger: CCTCTTCTGATGATGGGACCAGGAATTAAGGCCAAC...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | CAAAAGAGAATACTACATGTGGCACTGGGCCCCAGGTaGGCAGGACGTCTACATGGAAGAAGCAGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRILHVALGPR*AGRLHGRSRRL Trigger: GAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATTCTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCAAGATTCTGTCAAGTaGGTGAAGAGGCCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTQDSVK*VKRPLH Trigger: GTGGAGTGGCCTCTTCACTCACTTGACAGAATCTTG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACATTTGCAGATGCATTTaGCAACAGCGTCAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDICRCI*QQRQQG Trigger: TCCTTGTTGACGCTGTTGTCAAATGCATCTGCAAAT...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGTCTCTCTGCCAATCTTaGTGCCATCTGAGGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTSLCQS*CHLRCA Trigger: AGCACACCTCAGATGGCATCAAGATTGGCAGAGAGA...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGTTGTCGGAGCAAGAATaGAACATCTCTTGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKLSEQE*NISCPC Trigger: GCATGGACAAGAGATGTTGCATTCTTGCTCCGACAA...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGGCTTTGTCTGTATTCTaGCAGTCCTTGGTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKALSVF*QSLVIT Trigger: AGTGATGACCAAGGACTGGCAGAATACAGACAAAGC...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTCGGAGCAAGAATGCAACATCTCTTGTCCATGCTTCCACACGGTTACTTTTTCTTCTGTGTTCTaGGGGCCGGTGCTGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSEQECNISCPCFHTVTFSSVF*GPVLRV Trigger: CACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAA...AGTAACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCTTGCTCCGACAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS-3UTR TCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGATTCTGTCAAGTGAGTaGAGAGGCCACTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTILSSE*RGHSTL Trigger: CAATGTGGAGTGGCCTCTTCACTCACTTGACAGAAT...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAGTGTGCTATAACGTTTaGGTAATTTTGCCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTVCYNV*VILPYA Trigger: AGCGTAGGGCAAAATTACTCAAACGTTATAGCACAC...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGACGGTGGAATTTGAATaGCTGTTCATTTGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKTVEFE*LFICRC Trigger: GCATCTGCAAATGAACAGGCATTCAAATTCCACCGT...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAACGGTGGAATTTGAATaGCTGTTCATTTGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTTVEFE*LFICRC Trigger: GCATCTGCAAATGAACAGGCATTCAAATTCCACCGT...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCATATTCTGCCAGTCCTTaGTCATCACTCTCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSYSASP*SSLSFY Trigger: ATAGAAGGAGAGTGATGACCAAGGACTGGCAGAATA...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACCAAGTAAAGGACAAATaGCTTGGTGTAGTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDQVKDK*LGVVNL Trigger: CAGGTTAACTACACCAAGCCATTTGTCCTTTACTTG...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGGTATCCACTCAGATTTaGAGGCAGAGCAATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALVSTQI*RQSNPS Trigger: GCTGGGATTGCTCTGCCTCCAAATCTGAGTGGATAC...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTCACAGGGTGCATTTGTaGCAAAGTCAACCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGHRVHL*QSQPLW Trigger: CCAAAGTGGTTGACTTTGTCACAAATGCACCCTGTG...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTGTGGACGGTGGAATTTaGATGCCTGTTCATTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGVDGGI*MPVHLQ Trigger: CTGCAAATGAACAGGCATTCAAATTCCACCGTCCAC...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAGCTGTGAGCCAATGTTaGATTGCATTTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSAVSQC*IAFSYF Trigger: GAAGTATGAAAATGCAATCCAACATTGGCTCACAGC...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAGCTGTGAGCCAATGTTaGATTGCATTTTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GILGGQKRALAPLNWSYTAVSQC*IAFSYF Trigger: GAAGTATGAAAATGCAATCCAACATTGGCTCACAGC...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTTCCAAATTTCTGTGTCTGATAGCCATGCTTCTCCATGATGTCCATCCAATTGGAAGGAGTCACTaGCGACCAGCACCACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFSKFLCLIAMLLHDVHPIGRSH*RPAPRW Trigger: CCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAAT...TGGATGGACATCATGGAGAAGCATGGCTATCAGACACAGAAATTTGGAAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS-3UTR TCA 90 bp | AATACTACATGTGGCACTGGGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCATCTCTCCATGGTCTaGGGTATATATAACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTTCGTGPQVGRTSTWKKHLSMV*GIYNNS Trigger: ACTATTGTTATATATACCTCAGACCATGGAGAGATG...CTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCCCAGTGCCACATGTAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTGTGCTATAACGTTTaGGTAATTTTGCCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTVCYNV*VILPYA Trigger: AGCGTAGGGCAAAATTACTCAAACGTTATAGCACAC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGCTTCTCCATGATGTCCATCCATGTCGTATAATTTGGATCCAGACCCTTGGCGCCTGGTTCACTTaGATCCTTTTCTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMLLHDVHPCRIIWIQTLGAWFT*ILFFCV Trigger: AACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCC...AAGGGTCTGGATCCAAATTATACGACATGGATGGACATCATGGAGAAGCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS-3UTR CCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGTATTCTGCCAGTCCTTaGTCATCACTCTCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTYSASP*SSLSFY Trigger: ATAGAAGGAGAGTGATGACCAAGGACTGGCAGAATA...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAATTTTCATACTTCCTTaGATCTCTCTGCCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WDANHWWTGEEWAMSHWSIFILP*ISLPIL Trigger: CAAGATTGGCAGAGAGATCCAAGGAAGTATGAAAAT...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | CACACAAGTTGTGAGCCACTGTGTGGGTGCCAATACTaGGATCTTAGTCCTCTGATGAGTAGCAAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTSCEPLCGCQY*DLSPLMSSKSF Trigger: AAAGGACTTGCTACTCATCAGAGGACTAAGATCCAAGTATTGGCACCCACACAGTGGCTCACAACTTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGAGCCAATGTTGGATTaGATTTTCATACTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTEPMLD*IFILPW Trigger: CCAAGGAAGTATGAAAATGCAATCCAACATTGGCTC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTACCACTTTGGGATTTTaGTTGCATCATAAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGTTLGF*LHHKLP Trigger: AGGTAGCTTATGATGCAATCAAAATCCCAAAGTGGT...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGAACATCTCTTGTCCATaGTTCCACACGGTTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALNISCP*FHTVTN Trigger: ATTAGTAACCGTGTGGAAGCATGGACAAGAGATGTT...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGGAGCCAATGTTGGATTaGATTTTCATACTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALEPMLD*IFILPW Trigger: CCAAGGAAGTATGAAAATGCAATCCAACATTGGCTC...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGCAAGTAAAGGACAAATaGCTTGGTGTAGTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALQVKDK*LGVVNL Trigger: CAGGTTAACTACACCAAGCCATTTGTCCTTTACTTG...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGATAGCCATCTCTCCATaGTCTGAGGTATATATAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTIAISP*SEVYIT Trigger: TGTTATATATACCTCAGACCATGGAGAGATGGCTAT...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTCATCTCTCCATGGTCTaGGGTATATATAACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGHLSMV*GIYNNS Trigger: ACTATTGTTATATATACCTCAGACCATGGAGAGATG...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCCATGTCGTATAATTTaGATCCAGACCCTTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTPCRII*IQTLKI Trigger: AATTTTAAGGGTCTGGATCCAAATTATACGACATGG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGATAGCCATCTCTCCATaGTCTGAGGTATATATAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALIAISP*SEVYIT Trigger: TGTTATATATACCTCAGACCATGGAGAGATGGCTAT...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGTTTGCATTGCATCCATaGAATTCACTCAGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALFALHP*NSLRIQ Trigger: TTGGATTCTGAGTGAATTCCATGGATGCAATGCAAA...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | AGCCATTCGATTGCTTTGTCTGTATTCTGCCAGTCCTaGGTCATCACTCTCCTTCTATTCTTATCAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SHSIALSVFCQS*VITLLLFLSGI Trigger: TATCCCTGATAAGAATAGAAGGAGAGTGATGACCAAGGACTGGCAGAATACAGACAAAGCAATCGAATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGCAAAGTCAACCACTTTaGGATTTTGATTGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTTCLPGILGGQKRALQSQPL*DFDCII Trigger: TATGATGCAATCAAAATCCCAAAGTGGTTGACTTTG...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTCAAAGTCAACCACTTTaGGATTTTGATTGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: STWKKQKTQKGLMGPGYGQSQPL*DFDCII Trigger: TATGATGCAATCAAAATCCCAAAGTGGTTGACTTTG...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGGTATCCACTCAGATTTaGAGGCAGAGCAATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRVSTQI*RQSNPS Trigger: GCTGGGATTGCTCTGCCTCCAAATCTGAGTGGATAC...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGGGCGCCTGGTTCACTTaGATCCTTTTCTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRGAWFT*ILFFCV Trigger: AACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCC...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGTTGTCGGAGCAAGAATaGAACATCTCTTGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRLSEQE*NISCPC Trigger: GCATGGACAAGAGATGTTGCATTCTTGCTCCGACAA...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGATTTGCAGATGCATTTaGCAACAGCGTCAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRICRCI*QQRQQG Trigger: TCCTTGTTGACGCTGTTGTCAAATGCATCTGCAAAT...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | TTTAAATTGTATATGAATGAGTGTCCTGACTGCATTTaGTCTGTGTACTACATGTTTACCTGGCATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLYMNECPDCI*SVYYMFTWHPW Trigger: CCAAGGATGCCAGGTAAACATGTAGTACACAGACAAAATGCAGTCAGGACACTCATTCATATACAATTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR TCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGACCACTTTGGGATTTTaGTTGCATCATAAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRTTLGF*LHHKLP Trigger: AGGTAGCTTATGATGCAATCAAAATCCCAAAGTGGT...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR GCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGAACATCTCTTGTCCATaGTTCCACACGGTTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRNISCP*FHTVTN Trigger: ATTAGTAACCGTGTGGAAGCATGGACAAGAGATGTT...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGTTTGCATTGCATCCATaGAATTCACTCAGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRFALHP*NSLRIQ Trigger: TTGGATTCTGAGTGAATTCCATGGATGCAATGCAAA...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGATTTTCATACTTCCTTaGATCTCTCTGCCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRIFILP*ISLPIL Trigger: CAAGATTGGCAGAGAGATCCAAGGAAGTATGAAAAT...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| 3UTR CAA 72 bp | TGTAAAGAATATATCCATTTGGTTGGTGACTATAGCTaGTTCACAATAAGATACAAGCAAGGAGATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKEYIHLVGDYS*FTIRYKQGDCG Trigger: ACCACAATCTCCTTGCTTGTATCTTATTGTGAACAAGCTATAGTCACCAACCAAATGGATATATTCTTTACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGCCATGTCGTATAATTTaGATCCAGACCCTTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRPCRII*IQTLKI Trigger: AATTTTAAGGGTCTGGATCCAAATTATACGACATGG...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS CCA 90 bp | CCACGTTGGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTaGGGGCCGGTGCTGCGAGTGCTAACGCTGCGACCACCGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRWAPGSLASFSSVF*GPVLRVLTLRPPTP Trigger: TGGTGTCGGTGGTCGCAGCGTTAGCACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
||
| CDS GCA 90 bp | AAGGAGTCACTGGCGACCAGCACCACGTTGGGCGCCTGGTTCACTTaGATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGCTGCGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KESLATSTTLGAWFT*ILFFCVLGAGAASA Trigger: AGCACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
||
| CDS CCA 90 bp | CTTCCATCGAAGGAGTCACTGGCGACCAGCACCACGTTGGGCGCCTaGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSKESLATSTTLGA*FTCILFFCVLGAGA Trigger: AGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS CCA 90 bp | CCACATTGGAAGGAGTCACTGGCGACCAGCACCACGTTGGGCGCCTaGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHWKESLATSTTLGA*FTCILFFCVLGAGA Trigger: AGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAATGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS CCA 90 bp | AGGCCACTCCACATTGGAAGGAGTCACTGGCGACCAGCACCACGTTaGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLHIGRSHWRPAPR*APGSLASFSSVFWG Trigger: CCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAATGTGGAGTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACAGAGGCCACTCCACATaGCTGCACGTGATGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDRGHST*LHVMDS Trigger: GCTGTCCATCACGTGCAGCAATGTGGAGTGGCCTCT...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAAGAGGCCACTCCACATaGCTGCACGTGATGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WDANHWWTGEEWAMSHWSRGHST*LHVMDS Trigger: GCTGTCCATCACGTGCAGCAATGTGGAGTGGCCTCT...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS CCA 90 bp | ATGTTAGTCTTCCATCGAAGGAGTCACTGGCGACCAGCACCACGTTaGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MLVFHRRSHWRPAPR*APGSLASFSSVFWG Trigger: CCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAAGACTAACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS CCA 90 bp | GAGCCACTGGTGGACTGGGTTGGGCTGCTAGCCAGTGGACTGGAGTaGGCTGTGAGCCAATGTTGGATTGCATTTTCATACTTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPLVDWVGLLASGLE*AVSQCWIAFSYFLG Trigger: TCCAAGGAAGTATGAAAATGCAATCCAACATTGGCTCACAGCCCACTCCAGTCCACTGGCTAGCAGCCCAACCCAGTCCACCAGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACGGGCGCCTGGTTCACTaGCATCCTTTTCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDGRLVH*HPFLLC Trigger: ACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCC...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACAGCCATTCGATTGCTTaGTCTGTATTCTGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDSHSIA*SVFCQS Trigger: GGACTGGCAGAATACAGACAAAGCAATCGAATGGCT...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAATCTCTCTGCCAATCTaGATGCCATCTGAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GILGGQKRALAPLNWSYTISLPI*MPSEVC Trigger: GCACACCTCAGATGGCATCAAGATTGGCAGAGAGAT...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGGGCGCCTGGTTCACTaGCATCCTTTTCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTGRLVH*HPFLLC Trigger: ACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAAGAATGCAACATCTCTaGTCCATGCTTCCACACGGT | + |
|
Preference number: 5 (lower is better) Translates to: WDANHWWTGEEWAMSHWSRMQHL*SMLPHG Trigger: ACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCT...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS GCA 90 bp | GCTGCTAGCCAGTGGACTGGAGTGGGCTGTGAGCCAATGTTGGATTaGATTTTCATACTTCCTTGGATCTCTCTGCCAATCTTGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AASQWTGVGCEPMLD*IFILPWISLPILMP Trigger: TGGCATCAAGATTGGCAGAGAGATCCAAGGAAGTATGAAAATGCAATCCAACATTGGCTCACAGCCCACTCCAGTCCACTGGCTAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS-3UTR CAA 90 bp | GGCATCCTTGGAGGCCAGAAAAGAGCACTGGCTCCCCTGAATTGGAGTTACACAGTCTTAGCCATTCGATaGCTTTGTCTGTATTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GILGGQKRALAPLNWSYTVLAIR*LCLYSA Trigger: GGCAGAATACAGACAAAGCAATCGAATGGCTAAGAC...TGTGTAACTCCAATTCAGGGGAGCCAGTGCTCTTTTCTGGCCTCCAAGGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCTTGGTACTTGTAGGTaGGCCTTAATTCCTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTLGTCR*ALIPGP Trigger: GGGACCAGGAATTAAGGCCAACCTACAAGTACCAAG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGAGTATCCACTCAGATTaGGAGGCAGAGCAATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTSIHSD*EAEQSQ Trigger: CTGGGATTGCTCTGCCTCCAAATCTGAGTGGATACT...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGATCTCTCTGCCAATCTaGATGCCATCTGAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTISLPI*MPSEVC Trigger: GCACACCTCAGATGGCATCAAGATTGGCAGAGAGAT...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGGAGCAAGAATGCAACATCTCTTGTCCATGCTTCCACACGGTTACTAATGGAAGGGCGCCTGGTTCACTaGCATCCTTTTCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSKNATSLVHASTRLLMEGRLVH*HPFLLC Trigger: ACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCC...TTCCATTAGTAACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCTTGCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| CDS-3UTR CAA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAGTAGAAGCATTTGCATaGCATCCATGGAATTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: WDANHWWTGEEWAMSHWSVEAFA*HPWNSL Trigger: GAGTGAATTCCATGGATGCAATGCAAATGCTTCTAC...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | GGCCCCAGGTTGGCAGGACGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACCATTTTCATACTTCCTaGGATCTCTCTGCCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPRLAGRLHGRSRRLRKDHFHTS*DLSANL Trigger: AAGATTGGCAGAGAGATCCAAGGAAGTATGAAAATG...GTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACGTCCTGCCAACCTGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | TGGGATGCTAACCACTGGTGGACTGGAGAAGAGTGGGCTATGAGTCACTGGTCAGGCTGTGAGCCAATGTaGGATTGCATTTTCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: WDANHWWTGEEWAMSHWSGCEPM*DCIFIL Trigger: AAGTATGAAAATGCAATCCAACATTGGCTCACAGCC...TGACCAGTGACTCATAGCCCACTCTTCTCCAGTCCACCAGTGGTTAGCATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTAGAATGCAACATCTCTaGTCCATGCTTCCACACGGT | + |
|
Preference number: 5 (lower is better) Translates to: STWKKQKTQKGLMGPGYGRMQHL*SMLPHG Trigger: ACCGTGTGGAAGCATGGACAAGAGATGTTGCATTCT...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGGTATTCTGCCAGTCCTaGGTCATCACTCTCCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLCTTCLPGILGGQKRALVFCQS*VITLLL Trigger: TAGAAGGAGAGTGATGACCAAGGACTGGCAGAATAC...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTCTTAGCCATTCGATaGCTTTGTCTGTATTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTVLAIR*LCLYSA Trigger: GGCAGAATACAGACAAAGCAATCGAATGGCTAAGAC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCATTTGCAGATGCATTaGACAACAGCGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTHLQMH*TTASTR Trigger: CCTTGTTGACGCTGTTGTCAAATGCATCTGCAAATG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CCA 90 bp | GGAGTGGGCTGTGAGCCAATGTTGGATTGCATTTTCATACTTCCTTaGATCTCTCTGCCAATCTTGATGCCATCTGAGGTGTGCTATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVGCEPMLDCIFILP*ISLPILMPSEVCYN Trigger: GTTATAGCACACCTCAGATGGCATCAAGATTGGCAGAGAGATCCAAGGAAGTATGAAAATGCAATCCAACATTGGCTCACAGCCCACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGGCTGTGAGCCAATGTaGGATTGCATTTTCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTGCEPM*DCIFIL Trigger: AAGTATGAAAATGCAATCCAACATTGGCTCACAGCC...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | CGTCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGCATTTTCATACTTCCTaGGATCTCTCTGCCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRSRRLRKDSWDLDTHFHTS*DLSANL Trigger: AAGATTGGCAGAGAGATCCAAGGAAGTATGAAAATG...CGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 90 bp | TGCATCCATGGAATTCACTCAGAATCCAAGGTGGACGGTGGAATTTaGATGCCTGTTCATTTGCAGATGCATTTGACAACAGCGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: CIHGIHSESKVDGGI*MPVHLQMHLTTAST Trigger: TGTTGACGCTGTTGTCAAATGCATCTGCAAATGAACAGGCATTCAAATTCCACCGTCCACCTTGGATTCTGAGTGAATTCCATGGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | TCTACATGGAAGAAGCAGAAGACTCAGAAAGGACTCATGGGACCTGGATACGGTTCCCAGTGCAGTTTTTaGTATAGGAGGAGTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: STWKKQKTQKGLMGPGYGSQCSF*YRRSKN Trigger: ATTTTTACTCCTCCTATACAAAAAACTGCACTGGGA...ACCGTATCCAGGTCCCATGAGTCCTTTCTGAGTCTTCTGCTTCTTCCATGTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGTGTACTACATGTTTACCTGGCATCCTTGGAGGCCAGAAAAGAGCACTGTCCCAGTGCAGTTTTTaGTATAGGAGGAGTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLCTTCLPGILGGQKRALSQCSF*YRRSKN Trigger: ATTTTTACTCCTCCTATACAAAAAACTGCACTGGGA...CAGTGCTCTTTTCTGGCCTCCAAGGATGCCAGGTAAACATGTAGTACACAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 90 bp | ATCTCTCTGCCAATCTTGATGCCATCTGAGGTGTGCTATAACGTTTaGGTAATTTTGCCCTACGCTTTGCTTCCACATGATAAACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISLPILMPSEVCYNV*VILPYALLPHDKLF Trigger: GAACAGTTTATCATGTGGAAGCAAAGCGTAGGGCAAAATTACTCAAACGTTATAGCACACCTCAGATGGCATCAAGATTGGCAGAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 90 bp | AATCCACAGGGTGCATTTGTGACAAAGTCAACCACTTTGGGATTTTaGTTGCATCATAAGCTACCTTTTCAAGCCAGTAAAGGGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NPQGAFVTKSTTLGF*LHHKLPFQASKGKC Trigger: ACACTTCCCTTTACTGGCTTGAAAAGGTAGCTTATGATGCAATCAAAATCCCAAAGTGGTTGACTTTGTCACAAATGCACCCTGTGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGAGCCATTCGATTGCTTaGTCTGTATTCTGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRSHSIA*SVFCQS Trigger: GGACTGGCAGAATACAGACAAAGCAATCGAATGGCT...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS-3UTR CAA 90 bp | ACATATAGCTTGAGAAAGTTTTATTATTGTCTACTGCTACTGGAGAAGAGTAGGCATTTGCAGATGCATTaGACAACAGCGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TYSLRKFYYCLLLLEKSRHLQMH*TTASTR Trigger: CCTTGTTGACGCTGTTGTCAAATGCATCTGCAAATG...CCTACTCTTCTCCAGTAGCAGTAGACAATAATAAAACTTTCTCAAGCTATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | GACTGGGGAAGAGTGGGCTGTGAGCCACTGGTGGACTaGGTTGGGCTGCTAGCCAGTGGACTGGAGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DWGRVGCEPLVD*VGLLASGLEWA Trigger: AGCCCACTCCAGTCCACTGGCTAGCAGCCCAACCCAGTCCACCAGTGGCTCACAGCCCACTCTTCCCCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CAA 90 bp | GAAGGAGTCACTGGCGACCAGCACCACGTTGGGCGCCTGGTTCACTaGCATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGCTGCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: EGVTGDQHHVGRLVH*HPFLLCSGGRCCEC Trigger: GCACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
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| CDS GCA 72 bp | CTGGCGACCAGCACCACGTTGGGCGCCTGGTTCACTTaGATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LATSTTLGAWFT*ILFFCVLGAGA Trigger: AGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
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| CDS CAA 72 bp | ACTGGCGACCAGCACCACGTTGGGCGCCTGGTTCACTaGCATCCTTTTCTTCTGTGTTCTGGGGGCCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGDQHHVGRLVH*HPFLLCSGGRC Trigger: GCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | GCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTaGGGGCCGGTGCTGCGAGTGCTAACGCTGCGACCA | + |
|
Preference number: 6 (lower is better) Translates to: APGSLASFSSVF*GPVLRVLTLRP Trigger: TGGTCGCAGCGTTAGCACTCGCAGCACCGGCCCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
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| CDS CAA 90 bp | GAGGCCACTCCACATTGGAAGGAGTCACTGGCGACCAGCACCACGTaGGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EATPHWKESLATSTT*GAWFTCILFFCVLG Trigger: CCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAATGTGGAGTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| CDS CCA 72 bp | AAGGAGTCACTGGCGACCAGCACCACGTTGGGCGCCTaGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KESLATSTTLGA*FTCILFFCVLG Trigger: CCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000120573.3 ENSMUST00000223579.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | TTCCATCGAAGGAGTCACTGGCGACCAGCACCACGTTaGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FHRRSHWRPAPR*APGSLASFSSV Trigger: CACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | CACATTGGAAGGAGTCACTGGCGACCAGCACCACGTTaGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HIGRSHWRPAPR*APGSLASFSSV Trigger: CACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| CDS CAA 72 bp | CTTCCATCGAAGGAGTCACTGGCGACCAGCACCACGTaGGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSKESLATSTT*GAWFTCILFFC Trigger: ACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CAA 72 bp | CCACATTGGAAGGAGTCACTGGCGACCAGCACCACGTaGGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PHWKESLATSTT*GAWFTCILFFC Trigger: ACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCCAATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223579.3 |
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| CDS CCA 72 bp | CTGGTTGAAATGTTAGTCTTCCATCGAAGGAGTCACTaGCGACCAGCACCACGTTGGGCGCCTGGTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LVEMLVFHRRSH*RPAPRWAPGSL Trigger: AAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAAGACTAACATTTCAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CAA 90 bp | AATGTTAGTCTTCCATCGAAGGAGTCACTGGCGACCAGCACCACGTaGGGCGCCTGGTTCACTTGCATCCTTTTCTTCTGTGTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NVSLPSKESLATSTT*GAWFTCILFFCVLG Trigger: CCCCAGAACACAGAAGAAAAGGATGCAAGTGAACCAGGCGCCCAACGTGGTGCTGGTCGCCAGTGACTCCTTCGATGGAAGACTAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS GCA 72 bp | CAGTGGACTGGAGTGGGCTGTGAGCCAATGTTGGATTaGATTTTCATACTTCCTTGGATCTCTCTGCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: QWTGVGCEPMLD*IFILPWISLPI Trigger: GATTGGCAGAGAGATCCAAGGAAGTATGAAAATGCAATCCAACATTGGCTCACAGCCCACTCCAGTCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | TGCATTGCATCCATGGAATTCACTCAGAATCCAAGGTaGACGGTGGAATTTGAATGCCTGTTCATTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CIASMEFTQNPR*TVEFECLFICR Trigger: TCTGCAAATGAACAGGCATTCAAATTCCACCGTCCACCTTGGATTCTGAGTGAATTCCATGGATGCAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CCA 72 bp | TGTGAGCCAATGTTGGATTGCATTTTCATACTTCCTTaGATCTCTCTGCCAATCTTGATGCCATCTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CEPMLDCIFILP*ISLPILMPSEV Trigger: CACCTCAGATGGCATCAAGATTGGCAGAGAGATCCAAGGAAGTATGAAAATGCAATCCAACATTGGCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 72 bp | GGAATTCACTCAGAATCCAAGGTGGACGGTGGAATTTaGATGCCTGTTCATTTGCAGATGCATTTGACAACA | + |
|
Preference number: 6 (lower is better) Translates to: GIHSESKVDGGI*MPVHLQMHLTT Trigger: TGTTGTCAAATGCATCTGCAAATGAACAGGCATTCAAATTCCACCGTCCACCTTGGATTCTGAGTGAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 72 bp | CCAATCTTGATGCCATCTGAGGTGTGCTATAACGTTTaGGTAATTTTGCCCTACGCTTTGCTTCCACATGAT | + |
|
Preference number: 6 (lower is better) Translates to: PILMPSEVCYNV*VILPYALLPHD Trigger: ATCATGTGGAAGCAAAGCGTAGGGCAAAATTACTCAAACGTTATAGCACACCTCAGATGGCATCAAGATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CAA 72 bp | ATATCCACAAGAGAAACAACACTTGGTACTTGTAGGTaGGCCTTAATTCCTGGTCCCATCATCAGAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ISTRETTLGTCR*ALIPGPIIRRG Trigger: TCCTCTTCTGATGATGGGACCAGGAATTAAGGCCAACCTACAAGTACCAAGTGTTGTTTCTCTTGTGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS CAA 90 bp | ACCTGTCTTAGCCATTCGATTGCTTTGTCTGTATTCTGCCAGTCCTaGGTCATCACTCTCCTTCTATTCTTATCAGGGATAAGATTAATT | + |
|
Preference number: 6 (lower is better) Translates to: TCLSHSIALSVFCQS*VITLLLFLSGIRLI Trigger: AATTAATCTTATCCCTGATAAGAATAGAAGGAGAGTGATGACCAAGGACTGGCAGAATACAGACAAAGCAATCGAATGGCTAAGACAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
||
| CDS TCA 72 bp | TGTATAGGAGGAGTAAAAATCCACAGGGTGCATTTGTaGCAAAGTCAACCACTTTGGGATTTTGATTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: CIGGVKIHRVHL*QSQPLWDFDCI Trigger: GATGCAATCAAAATCCCAAAGTGGTTGACTTTGTCACAAATGCACCCTGTGGATTTTTACTCCTCCTATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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| CDS TCA 72 bp | GGTGCATTTGTGACAAAGTCAACCACTTTGGGATTTTaGTTGCATCATAAGCTACCTTTTCAAGCCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GAFVTKSTTLGF*LHHKLPFQASK Trigger: TTTACTGGCTTGAAAAGGTAGCTTATGATGCAATCAAAATCCCAAAGTGGTTGACTTTGTCACAAATGCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120573.3 ENSMUST00000239063.2 |
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